HEADER OXIDOREDUCTASE 29-MAY-15 5BQF TITLE PROBABLE 2-HYDROXYACID DEHYDROGENASE FROM RHIZOBIUM ETLI CFN 42 IN TITLE 2 COMPLEX WITH NADP, HEPES AND L(+)-TARTARIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: NADP-DEPENDENT 2-HYDROXYACID DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHIZOBIUM ETLI (STRAIN CFN 42 / ATCC 51251); SOURCE 3 ORGANISM_TAXID: 347834; SOURCE 4 STRAIN: CFN 42 / ATCC 51251; SOURCE 5 GENE: RHE_CH00179; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSGC-HIS KEYWDS DEHYDROGENASE, STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW YORK STRUCTURAL KEYWDS 2 GENOMICS RESEARCH CONSORTIUM, NYSGRC, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR K.M.LANGNER,I.G.SHABALIN,K.B.HANDING,O.A.GASIOROWSKA,M.STEAD, AUTHOR 2 B.S.HILLERICH,S.CHOWDHURY,J.HAMMONDS,M.D.ZIMMERMAN,N.AL OBAIDI, AUTHOR 3 J.BONANNO,R.SEIDEL,S.C.ALMO,W.MINOR,NEW YORK STRUCTURAL GENOMICS AUTHOR 4 RESEARCH CONSORTIUM (NYSGRC) REVDAT 3 01-JAN-20 5BQF 1 REMARK REVDAT 2 20-SEP-17 5BQF 1 SOURCE REMARK REVDAT 1 17-JUN-15 5BQF 0 JRNL AUTH K.M.LANGNER,I.G.SHABALIN,K.B.HANDING,O.A.GASIOROWSKA, JRNL AUTH 2 S.CHOWDHURY,M.D.ZIMMERMAN,W.MINOR JRNL TITL PROBABLE 2-HYDROXYACID DEHYDROGENASE FROM RHIZOBIUM ETLI CFN JRNL TITL 2 42 IN COMPLEX WITH NADP, HEPES AND L-TARTARIC ACID JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 55340 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.140 REMARK 3 R VALUE (WORKING SET) : 0.139 REMARK 3 FREE R VALUE : 0.165 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2857 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4073 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.19 REMARK 3 BIN R VALUE (WORKING SET) : 0.2290 REMARK 3 BIN FREE R VALUE SET COUNT : 225 REMARK 3 BIN FREE R VALUE : 0.2650 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2476 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 79 REMARK 3 SOLVENT ATOMS : 471 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.057 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.059 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.038 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.980 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.978 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.969 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2761 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2689 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3771 ; 1.441 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6201 ; 0.943 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 345 ; 5.539 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 132 ;33.187 ;23.030 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 481 ;11.446 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;15.658 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 428 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3069 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 638 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1297 ; 1.759 ; 0.982 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1296 ; 1.759 ; 0.982 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1627 ; 2.221 ; 1.469 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 79 ; 2.954 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 79 ; 9.285 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 43 REMARK 3 ORIGIN FOR THE GROUP (A): 16.7020 -2.7330 22.2600 REMARK 3 T TENSOR REMARK 3 T11: 0.0627 T22: 0.0345 REMARK 3 T33: 0.0202 T12: -0.0185 REMARK 3 T13: 0.0232 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 2.1408 L22: 1.4387 REMARK 3 L33: 0.8818 L12: -0.7010 REMARK 3 L13: -0.2762 L23: 0.3284 REMARK 3 S TENSOR REMARK 3 S11: 0.0572 S12: -0.0344 S13: -0.0939 REMARK 3 S21: 0.0099 S22: -0.0228 S23: 0.0785 REMARK 3 S31: -0.0176 S32: -0.1002 S33: -0.0345 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 44 A 118 REMARK 3 ORIGIN FOR THE GROUP (A): 23.7710 -6.1580 6.6890 REMARK 3 T TENSOR REMARK 3 T11: 0.0556 T22: 0.0636 REMARK 3 T33: 0.0256 T12: 0.0096 REMARK 3 T13: 0.0049 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.4636 L22: 1.3848 REMARK 3 L33: 0.6576 L12: -0.6131 REMARK 3 L13: -0.5322 L23: 0.6100 REMARK 3 S TENSOR REMARK 3 S11: 0.0652 S12: 0.0816 S13: -0.0038 REMARK 3 S21: 0.0216 S22: -0.0603 S23: 0.0489 REMARK 3 S31: -0.0639 S32: -0.1100 S33: -0.0050 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 119 A 172 REMARK 3 ORIGIN FOR THE GROUP (A): 37.7100 -24.1300 -7.4900 REMARK 3 T TENSOR REMARK 3 T11: 0.0293 T22: 0.0422 REMARK 3 T33: 0.0185 T12: -0.0080 REMARK 3 T13: -0.0020 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.2084 L22: 1.0632 REMARK 3 L33: 0.3185 L12: -0.2554 REMARK 3 L13: -0.0789 L23: -0.1522 REMARK 3 S TENSOR REMARK 3 S11: 0.0038 S12: 0.0561 S13: 0.0237 REMARK 3 S21: -0.0371 S22: -0.0154 S23: -0.0310 REMARK 3 S31: 0.0184 S32: -0.0666 S33: 0.0117 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 173 A 195 REMARK 3 ORIGIN FOR THE GROUP (A): 36.8760 -10.2280 -16.2540 REMARK 3 T TENSOR REMARK 3 T11: 0.0299 T22: 0.0771 REMARK 3 T33: 0.0344 T12: 0.0218 REMARK 3 T13: 0.0219 T23: 0.0391 REMARK 3 L TENSOR REMARK 3 L11: 1.4988 L22: 4.1053 REMARK 3 L33: 1.5670 L12: -0.7081 REMARK 3 L13: 0.8227 L23: -1.3670 REMARK 3 S TENSOR REMARK 3 S11: 0.0422 S12: 0.1741 S13: 0.1670 REMARK 3 S21: -0.1203 S22: -0.1681 S23: -0.2336 REMARK 3 S31: -0.0116 S32: 0.0646 S33: 0.1259 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 196 A 288 REMARK 3 ORIGIN FOR THE GROUP (A): 23.1070 -21.5820 -8.9110 REMARK 3 T TENSOR REMARK 3 T11: 0.0226 T22: 0.0760 REMARK 3 T33: 0.0111 T12: -0.0084 REMARK 3 T13: -0.0071 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.5685 L22: 0.5690 REMARK 3 L33: 0.8111 L12: -0.0282 REMARK 3 L13: -0.1237 L23: 0.0313 REMARK 3 S TENSOR REMARK 3 S11: -0.0102 S12: 0.1003 S13: -0.0202 REMARK 3 S21: -0.0585 S22: -0.0354 S23: 0.0673 REMARK 3 S31: 0.0153 S32: -0.1502 S33: 0.0457 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 289 A 319 REMARK 3 ORIGIN FOR THE GROUP (A): 29.6810 1.8350 10.9810 REMARK 3 T TENSOR REMARK 3 T11: 0.0652 T22: 0.0224 REMARK 3 T33: 0.0139 T12: -0.0066 REMARK 3 T13: 0.0138 T23: -0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.9034 L22: 1.0020 REMARK 3 L33: 1.9220 L12: 0.1239 REMARK 3 L13: -0.6084 L23: -0.6728 REMARK 3 S TENSOR REMARK 3 S11: 0.1441 S12: -0.0061 S13: 0.0475 REMARK 3 S21: 0.0991 S22: -0.1026 S23: -0.0229 REMARK 3 S31: -0.1553 S32: 0.0868 S33: -0.0414 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 5BQF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000205144. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 300 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK HIGH-RESOLUTION REMARK 200 DOUBLE-CRYSTAL MONOCHROMATOR. REMARK 200 LN2 COOLED FIRST CRYSTAL, REMARK 200 SAGITTAL FOCUSING 2ND CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58208 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : 0.06300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.54700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: 4XCV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 UL OF 15 MG/ML PROTEIN IN 20 MM REMARK 280 HEPES PH 7.5, 150 MM NACL, 10% GLYCEROL, 0.1% SODIUM AZIDE, 0.5 REMARK 280 MM TCEP 10 MM NADP WERE MIXED WITH 0.2 UL OF THE MCSG SUITE 2 REMARK 280 CONDITION #71 (0.2M NA TARTRATE, 20%W/V PEG 3350) AND REMARK 280 EQUILIBRATED AGAINST 1.5 M NACL SOLUTION IN 96 WELL 3 DROP REMARK 280 CRYSTALLIZATION PLATE (SWISSCI). BEFORE CRYSTALLIZATION THE REMARK 280 PROTEIN WAS INCUBATED WITH 1/50 V/V OF 2 MG/ML TEV SOLUTION, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.70300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.84600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.84600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.85150 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.84600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.84600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 113.55450 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.84600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.84600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 37.85150 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.84600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.84600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 113.55450 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 75.70300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 65.69200 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -65.69200 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 16 CD OE1 OE2 REMARK 470 LYS A 173 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 305 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 305 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 29 -24.01 -151.95 REMARK 500 ALA A 130 88.21 -151.36 REMARK 500 ALA A 285 71.61 -162.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEG A 402 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 405 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 241 O REMARK 620 2 THR A 241 OG1 80.3 REMARK 620 3 SER A 245 OG 84.0 163.6 REMARK 620 4 HOH A 707 O 84.5 103.8 79.6 REMARK 620 5 HOH A 847 O 169.9 89.6 106.1 97.6 REMARK 620 6 HOH A 779 O 90.7 82.1 93.1 171.6 88.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EPE A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TLA A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4XCV RELATED DB: PDB REMARK 900 SAME PROTEIN, IN COMPLEX WITH NADPH. REMARK 900 RELATED ID: NYSGRC-014307 RELATED DB: TARGETTRACK DBREF 5BQF A 1 319 UNP Q2KDT2 Q2KDT2_RHIEC 1 319 SEQADV 5BQF PHE A -2 UNP Q2KDT2 EXPRESSION TAG SEQADV 5BQF GLN A -1 UNP Q2KDT2 EXPRESSION TAG SEQADV 5BQF SER A 0 UNP Q2KDT2 EXPRESSION TAG SEQRES 1 A 322 PHE GLN SER MET SER VAL ARG PRO PRO VAL LEU VAL ASP SEQRES 2 A 322 ILE LYS PHE ASN PRO GLU GLY VAL ASP ARG VAL LEU LYS SEQRES 3 A 322 THR ALA PHE ALA ASP ARG GLY SER ILE ASN LEU ALA ASP SEQRES 4 A 322 PRO ALA ASN ARG GLU ARG ASP PHE SER GLU THR GLU TYR SEQRES 5 A 322 ALA LEU LEU TRP LYS PRO ASP ALA ASP LEU PHE ARG ARG SEQRES 6 A 322 ALA PRO ASN LEU LYS VAL ILE PHE SER GLY GLY ALA GLY SEQRES 7 A 322 VAL ASP HIS ILE ILE GLY MET ALA GLY LEU PRO ASP ILE SEQRES 8 A 322 PRO ILE VAL ARG PHE VAL ASP ARG SER LEU THR THR ARG SEQRES 9 A 322 MET SER GLU TRP VAL VAL MET GLN CYS LEU MET HIS LEU SEQRES 10 A 322 ARG GLY GLN TYR GLY HIS ASP SER HIS GLN ARG ARG ARG SEQRES 11 A 322 GLU TRP ALA LYS LEU ILE ALA PRO GLU ALA ALA GLU VAL SEQRES 12 A 322 THR VAL GLY VAL MET GLY LEU GLY ILE LEU GLY GLN ASP SEQRES 13 A 322 ALA VAL ALA LYS LEU LYS VAL MET GLY PHE ASN VAL ILE SEQRES 14 A 322 GLY TRP SER ARG THR ARG LYS THR ILE GLU GLY VAL GLU SEQRES 15 A 322 THR PHE ASP ALA GLY GLU LEU ASP ARG PHE LEU ALA LYS SEQRES 16 A 322 THR ASP ILE LEU VAL GLY LEU LEU PRO LEU THR PRO GLU SEQRES 17 A 322 THR THR GLY PHE TYR ASP SER GLU LEU PHE LYS LYS LEU SEQRES 18 A 322 ARG ARG ASP GLY ALA LEU GLY GLN PRO VAL PHE ILE ASN SEQRES 19 A 322 ALA GLY ARG GLY LYS SER GLN ILE GLU THR ASP ILE VAL SEQRES 20 A 322 SER ALA VAL ARG GLU GLY THR LEU GLY GLY ALA SER LEU SEQRES 21 A 322 ASP VAL PHE GLU VAL GLU PRO LEU ALA THR ASP SER PRO SEQRES 22 A 322 LEU TRP GLU LEU GLU ASN VAL PHE ILE THR PRO HIS ASP SEQRES 23 A 322 ALA ALA VAL SER GLU GLU ASN ALA LEU PHE ARG HIS VAL SEQRES 24 A 322 GLU MET GLN ILE ALA ARG PHE GLU ARG GLY GLU PRO LEU SEQRES 25 A 322 GLN PHE VAL ILE ASP ARG ALA ALA GLY TYR HET EPE A 401 15 HET PEG A 402 4 HET NAP A 403 48 HET TLA A 404 10 HET NA A 405 1 HET CL A 406 1 HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM TLA L(+)-TARTARIC ACID HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETSYN EPE HEPES HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 EPE C8 H18 N2 O4 S FORMUL 3 PEG C4 H10 O3 FORMUL 4 NAP C21 H28 N7 O17 P3 FORMUL 5 TLA C4 H6 O6 FORMUL 6 NA NA 1+ FORMUL 7 CL CL 1- FORMUL 8 HOH *471(H2 O) HELIX 1 AA1 ASN A 14 LYS A 23 1 10 HELIX 2 AA2 ASP A 36 ARG A 40 5 5 HELIX 3 AA3 ASP A 58 ALA A 63 1 6 HELIX 4 AA4 ASP A 95 GLY A 116 1 22 HELIX 5 AA5 GLY A 116 ARG A 126 1 11 HELIX 6 AA6 GLU A 136 GLU A 139 5 4 HELIX 7 AA7 GLY A 148 GLY A 162 1 15 HELIX 8 AA8 ASP A 182 GLY A 184 5 3 HELIX 9 AA9 GLU A 185 LYS A 192 1 8 HELIX 10 AB1 THR A 203 THR A 207 5 5 HELIX 11 AB2 ASP A 211 LYS A 216 1 6 HELIX 12 AB3 ARG A 234 GLN A 238 5 5 HELIX 13 AB4 ILE A 239 GLU A 249 1 11 HELIX 14 AB5 SER A 269 LEU A 274 5 6 HELIX 15 AB6 GLU A 288 ARG A 305 1 18 SHEET 1 AA1 5 SER A 31 ASN A 33 0 SHEET 2 AA1 5 VAL A 7 ILE A 11 1 N VAL A 9 O ILE A 32 SHEET 3 AA1 5 TYR A 49 TRP A 53 1 O LEU A 51 N LEU A 8 SHEET 4 AA1 5 VAL A 68 SER A 71 1 O PHE A 70 N ALA A 50 SHEET 5 AA1 5 ILE A 90 VAL A 91 1 O VAL A 91 N ILE A 69 SHEET 1 AA2 7 GLU A 179 PHE A 181 0 SHEET 2 AA2 7 ASN A 164 TRP A 168 1 N GLY A 167 O PHE A 181 SHEET 3 AA2 7 THR A 141 MET A 145 1 N VAL A 142 O ASN A 164 SHEET 4 AA2 7 ILE A 195 GLY A 198 1 O VAL A 197 N MET A 145 SHEET 5 AA2 7 VAL A 228 ASN A 231 1 O VAL A 228 N LEU A 196 SHEET 6 AA2 7 GLY A 254 LEU A 257 1 O SER A 256 N ASN A 231 SHEET 7 AA2 7 VAL A 277 ILE A 279 1 O PHE A 278 N LEU A 257 LINK O THR A 241 NA NA A 405 1555 1555 2.45 LINK OG1 THR A 241 NA NA A 405 1555 1555 2.41 LINK OG SER A 245 NA NA A 405 1555 1555 2.40 LINK NA NA A 405 O HOH A 707 1555 1555 2.43 LINK NA NA A 405 O HOH A 847 1555 7545 2.31 LINK NA NA A 405 O HOH A 779 1555 7545 2.38 CISPEP 1 GLU A 263 PRO A 264 0 -3.54 SITE 1 AC1 10 PHE A 13 TRP A 53 GLY A 72 HIS A 282 SITE 2 AC1 10 SER A 287 LEU A 292 TLA A 404 HOH A 564 SITE 3 AC1 10 HOH A 671 HOH A 690 SITE 1 AC2 5 VAL A 94 ARG A 96 THR A 99 ILE A 149 SITE 2 AC2 5 HOH A 772 SITE 1 AC3 38 ALA A 74 ARG A 92 MET A 102 GLY A 146 SITE 2 AC3 38 LEU A 147 GLY A 148 ILE A 149 LEU A 150 SITE 3 AC3 38 TRP A 168 SER A 169 ARG A 170 THR A 171 SITE 4 AC3 38 LEU A 199 LEU A 200 PRO A 201 GLU A 205 SITE 5 AC3 38 ALA A 232 GLY A 233 ARG A 234 ASP A 258 SITE 6 AC3 38 HIS A 282 ALA A 285 TYR A 319 TLA A 404 SITE 7 AC3 38 HOH A 505 HOH A 515 HOH A 526 HOH A 531 SITE 8 AC3 38 HOH A 547 HOH A 548 HOH A 561 HOH A 604 SITE 9 AC3 38 HOH A 605 HOH A 645 HOH A 652 HOH A 654 SITE 10 AC3 38 HOH A 673 HOH A 757 SITE 1 AC4 11 GLY A 73 ALA A 74 ARG A 234 HIS A 282 SITE 2 AC4 11 ALA A 285 VAL A 286 SER A 287 EPE A 401 SITE 3 AC4 11 NAP A 403 HOH A 564 HOH A 568 SITE 1 AC5 5 THR A 241 SER A 245 HOH A 707 HOH A 779 SITE 2 AC5 5 HOH A 847 SITE 1 AC6 3 THR A 241 PRO A 270 HOH A 860 CRYST1 65.692 65.692 151.406 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015223 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015223 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006605 0.00000 MASTER 487 0 6 15 12 0 21 6 0 0 0 25 END