HEADER TRANSFERASE 20-NOV-14 4WZU TITLE CRYSTAL STRUCTURE OF BETA-KETOACYL-(ACYL CARRIER PROTEIN) SYNTHASE TITLE 2 III-2 (FABH2) FROM VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3 PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III PROTEIN 2, COMPND 5 BETA-KETOACYL-ACP SYNTHASE III 2,KAS III 2; COMPND 6 EC: 2.3.1.180; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE SEROTYPE O1; SOURCE 3 ORGANISM_TAXID: 243277; SOURCE 4 STRAIN: ATCC 39315 / EL TOR INABA N16961; SOURCE 5 GENE: FABH2, VC_A0751; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, FABH, BETA-KETOACYL-(ACYL CARRIER PROTEIN) SYNTHASE KEYWDS 3 III, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.HOU,M.CHRUSZCZ,H.ZHENG,D.R.COOPER,M.D.CHORDIA,M.D.ZIMMERMAN, AUTHOR 2 W.F.ANDERSON,W.MINOR,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS AUTHOR 3 DISEASES (CSGID) REVDAT 5 11-DEC-19 4WZU 1 REMARK REVDAT 4 27-SEP-17 4WZU 1 REMARK REVDAT 3 14-OCT-15 4WZU 1 REMARK REVDAT 2 03-JUN-15 4WZU 1 JRNL REVDAT 1 03-DEC-14 4WZU 0 JRNL AUTH J.HOU,M.CHRUSZCZ,H.ZHENG,M.GRABOWSKI,M.D.CHORDIA, JRNL AUTH 2 W.F.ANDERSON,W.MINOR JRNL TITL STRUCTURAL AND ENZYMATIC STUDIES OF BETA-KETOACYL-(ACYL JRNL TITL 2 CARRIER PROTEIN) SYNTHASE III (FABH) FROM VIBRIO CHOLERAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 25834 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1320 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.93 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1854 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.2180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2675 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.73000 REMARK 3 B22 (A**2) : -1.85000 REMARK 3 B33 (A**2) : 1.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.142 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.096 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.644 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2734 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2579 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3721 ; 1.336 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5907 ; 0.775 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 359 ; 6.233 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 116 ;33.248 ;24.310 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 425 ;12.084 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;16.452 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 431 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3173 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 630 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1436 ; 0.937 ; 1.493 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1435 ; 0.935 ; 1.490 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1795 ; 1.573 ; 2.232 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 35 REMARK 3 ORIGIN FOR THE GROUP (A): 17.6420 17.4720 11.7500 REMARK 3 T TENSOR REMARK 3 T11: 0.0940 T22: 0.2109 REMARK 3 T33: 0.2339 T12: -0.0095 REMARK 3 T13: 0.1100 T23: -0.1523 REMARK 3 L TENSOR REMARK 3 L11: 2.3688 L22: 1.5965 REMARK 3 L33: 3.0062 L12: 0.3288 REMARK 3 L13: -1.0469 L23: 0.0099 REMARK 3 S TENSOR REMARK 3 S11: -0.0265 S12: 0.4970 S13: -0.3163 REMARK 3 S21: -0.3675 S22: 0.1620 S23: -0.4973 REMARK 3 S31: -0.0525 S32: 0.0353 S33: -0.1356 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 36 A 185 REMARK 3 ORIGIN FOR THE GROUP (A): 5.7170 21.0850 18.6700 REMARK 3 T TENSOR REMARK 3 T11: 0.0599 T22: 0.2161 REMARK 3 T33: 0.1005 T12: -0.0190 REMARK 3 T13: 0.0231 T23: -0.0510 REMARK 3 L TENSOR REMARK 3 L11: 1.5308 L22: 1.5910 REMARK 3 L33: 0.5237 L12: 0.2466 REMARK 3 L13: 0.1083 L23: 0.1533 REMARK 3 S TENSOR REMARK 3 S11: -0.0569 S12: 0.3168 S13: -0.2108 REMARK 3 S21: -0.2298 S22: 0.1325 S23: -0.1614 REMARK 3 S31: 0.0219 S32: -0.0058 S33: -0.0756 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 186 A 359 REMARK 3 ORIGIN FOR THE GROUP (A): 16.4910 24.4020 17.1670 REMARK 3 T TENSOR REMARK 3 T11: 0.0485 T22: 0.2355 REMARK 3 T33: 0.2010 T12: -0.0225 REMARK 3 T13: 0.0961 T23: -0.0779 REMARK 3 L TENSOR REMARK 3 L11: 1.4524 L22: 1.3379 REMARK 3 L33: 0.9334 L12: 0.4106 REMARK 3 L13: 0.2852 L23: 0.0284 REMARK 3 S TENSOR REMARK 3 S11: -0.1069 S12: 0.4043 S13: -0.2141 REMARK 3 S21: -0.2460 S22: 0.1512 S23: -0.5147 REMARK 3 S31: -0.0368 S32: 0.1155 S33: -0.0443 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 4WZU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000204842. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27226 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.63200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2EBD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SUCCINIC ACID,20% (W/V) PEG REMARK 280 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 39.42900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.10600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.42900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.10600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 60.21200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 557 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 361 REMARK 465 GLU A 362 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 ARG A 39 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 186 CD OE1 NE2 REMARK 470 LEU A 315 CG CD1 CD2 REMARK 470 ARG A 323 CZ NH1 NH2 REMARK 470 LYS A 351 CG CD CE NZ REMARK 470 GLU A 354 CG CD OE1 OE2 REMARK 470 LYS A 357 CG CD CE NZ REMARK 470 ARG A 358 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 103 -32.49 74.27 REMARK 500 ALA A 112 -140.60 53.76 REMARK 500 ARG A 142 75.37 -119.45 REMARK 500 GLN A 177 -113.69 -103.83 REMARK 500 GLN A 252 73.29 -108.98 REMARK 500 SER A 283 -117.52 49.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 244 O REMARK 620 2 ASP A 246 OD2 83.6 REMARK 620 3 ASP A 305 OD2 91.9 101.9 REMARK 620 4 HOH A 638 O 156.9 75.4 83.2 REMARK 620 5 HOH A 551 O 102.0 86.2 164.7 86.4 REMARK 620 6 HOH A 558 O 107.1 165.0 88.5 95.4 81.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP01493 RELATED DB: TARGETTRACK DBREF 4WZU A 1 362 UNP Q9KLJ3 FABH2_VIBCH 1 362 SEQRES 1 A 362 MET THR GLN CYS TYR ALA GLU ILE THR GLY TRP GLY LYS SEQRES 2 A 362 CYS LEU PRO PRO ALA THR LEU SER ASN HIS ASP LEU SER SEQRES 3 A 362 THR PHE LEU ASP THR SER ASP GLU TRP ILE GLN SER ARG SEQRES 4 A 362 THR GLY ILE GLU GLN ARG ARG ILE SER HIS VAL ASN THR SEQRES 5 A 362 SER ASP LEU ALA THR VAL ALA ALA GLN HIS ALA ILE ALA SEQRES 6 A 362 CYS ALA GLY VAL SER VAL GLU GLU ILE ASP LEU ILE ILE SEQRES 7 A 362 VAL ALA THR CYS SER PRO ASP SER LEU ILE PRO ASN ILE SEQRES 8 A 362 ALA SER ARG VAL GLN GLN ASN LEU GLY ILE PRO SER ALA SEQRES 9 A 362 ALA ALA PHE ASP LEU ASN ALA ALA CYS THR GLY PHE LEU SEQRES 10 A 362 TYR GLY LEU GLU THR ALA THR ARG LEU MET GLN ALA SER SEQRES 11 A 362 HIS TYR ARG HIS ALA LEU VAL ILE GLY ALA GLU ARG LEU SEQRES 12 A 362 SER PHE TYR LEU ASP TRP THR LYS ARG ASP THR ALA VAL SEQRES 13 A 362 LEU PHE GLY ASP GLY ALA GLY ALA VAL VAL LEU SER LYS SEQRES 14 A 362 THR GLU GLN LYS VAL GLY LEU GLN ASP ALA GLN ILE GLY SEQRES 15 A 362 CYS ASP ALA GLN GLY ARG ASP ILE LEU ALA VAL PRO LYS SEQRES 16 A 362 PHE GLY THR ALA MET ASP ARG PHE ASP ALA ASP ASN GLY SEQRES 17 A 362 TYR TRP ALA PHE ASP PHE VAL GLY LYS GLU ILE PHE LYS SEQRES 18 A 362 ARG ALA VAL ARG GLY MET GLY ALA ALA ALA GLN GLN VAL SEQRES 19 A 362 LEU ALA ARG SER GLY LEU SER THR GLU GLU ILE ASP VAL SEQRES 20 A 362 VAL ILE PRO HIS GLN ALA ASN ILE ARG ILE ILE GLN THR SEQRES 21 A 362 LEU CYS ASP LEU ALA GLY ILE ALA GLN ASP LYS ALA PHE SEQRES 22 A 362 VAL ASN ILE HIS ARG TYR GLY ASN THR SER ALA ALA THR SEQRES 23 A 362 VAL PRO ILE ALA LEU CYS GLU ALA LEU GLU GLN GLY LYS SEQRES 24 A 362 ILE LYS PRO HIS ASP ASP LEU LEU VAL ALA ALA PHE GLY SEQRES 25 A 362 ALA GLY LEU THR TRP GLY ALA GLY HIS ILE ARG TRP GLY SEQRES 26 A 362 GLU ARG ILE THR PRO LEU GLY LYS SER ASP ALA GLN LEU SEQRES 27 A 362 PRO SER CYS ASP HIS THR ALA LEU ASP LEU LEU SER LYS SEQRES 28 A 362 ALA ILE GLU HIS CYS LYS ARG HIS GLN SER GLU HET NA A 401 1 HETNAM NA SODIUM ION FORMUL 2 NA NA 1+ FORMUL 3 HOH *140(H2 O) HELIX 1 AA1 ASN A 22 THR A 27 1 6 HELIX 2 AA2 SER A 32 GLY A 41 1 10 HELIX 3 AA3 ASN A 51 GLY A 68 1 18 HELIX 4 AA4 SER A 70 ILE A 74 5 5 HELIX 5 AA5 ILE A 91 GLY A 100 1 10 HELIX 6 AA6 ALA A 111 CYS A 113 5 3 HELIX 7 AA7 THR A 114 SER A 130 1 17 HELIX 8 AA8 SER A 144 TYR A 146 5 3 HELIX 9 AA9 LYS A 151 VAL A 156 1 6 HELIX 10 AB1 ALA A 185 ASP A 189 5 5 HELIX 11 AB2 VAL A 215 GLY A 239 1 25 HELIX 12 AB3 SER A 241 ILE A 245 5 5 HELIX 13 AB4 ASN A 254 GLY A 266 1 13 HELIX 14 AB5 ALA A 268 ALA A 272 5 5 HELIX 15 AB6 ASN A 275 GLY A 280 1 6 HELIX 16 AB7 THR A 282 ALA A 284 5 3 HELIX 17 AB8 ALA A 285 GLN A 297 1 13 HELIX 18 AB9 THR A 344 GLN A 360 1 17 SHEET 1 AA1 5 TYR A 5 CYS A 14 0 SHEET 2 AA1 5 ASP A 160 THR A 170 -1 O ALA A 162 N CYS A 14 SHEET 3 AA1 5 HIS A 134 ARG A 142 -1 N GLY A 139 O GLY A 163 SHEET 4 AA1 5 LEU A 76 ALA A 80 1 N ALA A 80 O ILE A 138 SHEET 5 AA1 5 ALA A 105 LEU A 109 1 O LEU A 109 N VAL A 79 SHEET 1 AA2 2 THR A 19 SER A 21 0 SHEET 2 AA2 2 GLN A 44 ARG A 46 -1 O ARG A 45 N LEU A 20 SHEET 1 AA3 4 GLY A 175 CYS A 183 0 SHEET 2 AA3 4 THR A 316 ARG A 323 -1 O HIS A 321 N GLN A 177 SHEET 3 AA3 4 ASP A 305 GLY A 312 -1 N LEU A 306 O ILE A 322 SHEET 4 AA3 4 VAL A 247 PRO A 250 1 N ILE A 249 O LEU A 307 SHEET 1 AA4 2 LEU A 191 ALA A 192 0 SHEET 2 AA4 2 ASP A 213 PHE A 214 -1 O ASP A 213 N ALA A 192 LINK O GLU A 244 NA NA A 401 1555 1555 2.49 LINK OD2 ASP A 246 NA NA A 401 1555 1555 2.52 LINK OD2 ASP A 305 NA NA A 401 1555 1555 2.39 LINK NA NA A 401 O HOH A 638 1555 1555 2.33 LINK NA NA A 401 O HOH A 551 1555 1555 2.26 LINK NA NA A 401 O HOH A 558 1555 1555 2.23 CISPEP 1 ILE A 88 PRO A 89 0 -6.15 CISPEP 2 GLY A 314 LEU A 315 0 -3.01 SITE 1 AC1 6 GLU A 244 ASP A 246 ASP A 305 HOH A 551 SITE 2 AC1 6 HOH A 558 HOH A 638 CRYST1 78.858 60.212 68.436 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012681 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016608 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014612 0.00000 MASTER 377 0 1 18 13 0 2 6 0 0 0 28 END