HEADER HYDROLASE 24-MAR-15 4UHE TITLE STRUCTURAL STUDIES OF A THERMOPHILIC ESTERASE FROM TITLE 2 THERMOGUTTA TERRIFONTIS (MALATE BOUND) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.1.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLANCTOMYCETES BACTERIUM R1; SOURCE 3 ORGANISM_TAXID: 1331910; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ARCTICEXPRESS RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PLATE31 KEYWDS HYDROLASE, ALPHA BETA HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.SAYER,M.N.ISUPOV,E.BONCH-OSMOLOVSKAYA,J.A.LITTLECHILD REVDAT 2 12-AUG-15 4UHE 1 JRNL REVDAT 1 10-JUN-15 4UHE 0 JRNL AUTH C.SAYER,M.N.ISUPOV,E.BONCH-OSMOLOVSKAYA,J.A.LITTLECHILD JRNL TITL STRUCTURAL STUDIES OF A THERMOPHILIC ESTERASE FROM A NEW JRNL TITL 2 PLANCTOMYCETES SPECIES, THERMOGUTTA TERRIFONTIS. JRNL REF FEBS J. V. 282 2846 2015 JRNL REFN ISSN 1742-464X JRNL PMID 26011036 JRNL DOI 10.1111/FEBS.13326 REMARK 2 REMARK 2 RESOLUTION. 1.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU, REMARK 3 STEINER,NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : NONE REMARK 3 COMPLETENESS FOR RANGE (%) : 98.27 REMARK 3 NUMBER OF REFLECTIONS : 81741 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.10854 REMARK 3 R VALUE (WORKING SET) : 0.10679 REMARK 3 FREE R VALUE : 0.14224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.9 REMARK 3 FREE R VALUE TEST SET COUNT : 4255 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.160 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.190 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5754 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.208 REMARK 3 BIN FREE R VALUE SET COUNT : 298 REMARK 3 BIN FREE R VALUE : 0.240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2465 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 462 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.146 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00 REMARK 3 B22 (A**2) : 0.00 REMARK 3 B33 (A**2) : -0.02 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.029 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.032 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.022 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.101 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.986 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.979 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2589 ; 0.015 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2610 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3587 ; 1.834 ; 1.999 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6087 ; 1.072 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 379 ; 5.607 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 130 ;30.398 ;22.308 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 503 ;14.358 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;17.151 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 399 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3015 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 595 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1214 ; 2.177 ; 2.909 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1213 ; 1.810 ; 2.897 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1548 ; 2.506 ; 4.957 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1375 ; 4.018 ; 4.002 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5198 ; 2.160 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 21 ;41.582 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5538 ;13.480 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 4UHE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-MAR-15. REMARK 100 THE PDBE ID CODE IS EBI-63378. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86054 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.16 REMARK 200 RESOLUTION RANGE LOW (A) : 37.52 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 9.6 REMARK 200 R MERGE (I) : 0.09 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.20 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : 9.6 REMARK 200 R MERGE FOR SHELL (I) : 0.96 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2XUA REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.4 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 151.37333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 75.68667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 75.68667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 151.37333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 274 REMARK 465 ALA A 275 REMARK 465 GLY A 276 REMARK 465 HIS A 277 REMARK 465 HIS A 278 REMARK 465 HIS A 279 REMARK 465 HIS A 280 REMARK 465 HIS A 281 REMARK 465 HIS A 282 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 272 CG ND1 CD2 CE1 NE2 REMARK 470 THR A 273 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD B GLU A 15 O HOH A 2042 2.01 REMARK 500 OE2B GLU A 15 O HOH A 2042 1.49 REMARK 500 OE2B GLU A 21 O HOH A 2048 1.98 REMARK 500 CD B GLU A 47 O HOH A 2103 1.62 REMARK 500 OE2B GLU A 47 O HOH A 2103 0.40 REMARK 500 NH2B ARG A 115 O HOH A 2215 2.17 REMARK 500 OD1B ASP A 116 O HOH A 2212 1.80 REMARK 500 OD1B ASP A 116 O HOH A 2217 1.83 REMARK 500 CZ A ARG A 129 O HOH A 2230 1.89 REMARK 500 CZ A ARG A 129 O HOH A 2231 1.51 REMARK 500 NH1A ARG A 129 O HOH A 2231 0.30 REMARK 500 NH2A ARG A 129 O HOH A 2230 0.57 REMARK 500 CD B GLU A 134 O HOH A 2240 1.04 REMARK 500 OE1B GLU A 134 O HOH A 2240 0.70 REMARK 500 OE2B GLU A 134 O HOH A 2240 1.59 REMARK 500 OD1B ASN A 138 O HOH A 2250 1.97 REMARK 500 OD1B ASN A 138 O HOH A 2256 1.59 REMARK 500 CD B ARG A 140 O HOH A 2248 1.28 REMARK 500 NE B ARG A 140 O HOH A 2248 0.84 REMARK 500 CZ B ARG A 140 O HOH A 2248 1.21 REMARK 500 NH1B ARG A 140 O HOH A 2248 1.67 REMARK 500 CD A ARG A 141 O HOH A 2249 1.96 REMARK 500 NE A ARG A 141 O HOH A 2249 2.18 REMARK 500 CZ A ARG A 141 O HOH A 2249 2.18 REMARK 500 NH1A ARG A 141 O HOH A 2249 1.87 REMARK 500 CZ B ARG A 147 O HOH A 2284 2.11 REMARK 500 NH2B ARG A 147 O HOH A 2284 0.80 REMARK 500 CG B ARG A 148 O HOH A 2269 2.15 REMARK 500 CD B ARG A 148 O HOH A 2269 1.77 REMARK 500 CD B ARG A 148 O HOH A 2268 1.86 REMARK 500 CD B ARG A 148 O HOH A 2288 1.72 REMARK 500 NE B ARG A 148 O HOH A 2269 1.55 REMARK 500 NE B ARG A 148 O HOH A 2288 1.72 REMARK 500 CZ B ARG A 148 O HOH A 2288 2.00 REMARK 500 NH1B ARG A 148 O HOH A 2268 1.86 REMARK 500 CD B GLU A 165 O HOH A 2321 1.56 REMARK 500 OE2B GLU A 165 O HOH A 2321 0.62 REMARK 500 CD B GLU A 176 O HOH A 2339 1.98 REMARK 500 CD B GLU A 176 O HOH A 2343 1.75 REMARK 500 OE1B GLU A 176 O HOH A 2343 0.69 REMARK 500 OE2B GLU A 176 O HOH A 2339 0.73 REMARK 500 CE B LYS A 177 O HOH A 2085 1.52 REMARK 500 NH1A ARG A 179 O HOH A 2353 1.66 REMARK 500 CD B GLU A 188 O HOH A 2163 1.58 REMARK 500 OE2B GLU A 188 O HOH A 2163 1.04 REMARK 500 OE2A GLU A 199 O HOH A 2372 1.62 REMARK 500 CD2B LEU A 217 CG1B VAL A 243 2.20 REMARK 500 CD A GLU A 228 O HOH A 2399 1.86 REMARK 500 OE1A GLU A 228 O HOH A 2399 0.67 REMARK 500 CD A GLU A 229 O HOH A 2223 1.78 REMARK 500 REMARK 500 THIS ENTRY HAS 85 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND1B HIS A 88 ND1B HIS A 88 4555 1.37 REMARK 500 ND1B HIS A 88 CE1B HIS A 88 4555 1.86 REMARK 500 CE1B HIS A 88 CE1B HIS A 88 4555 2.11 REMARK 500 NH2B ARG A 140 NH2B ARG A 140 6554 1.68 REMARK 500 NE A ARG A 141 OE2B GLU A 144 6554 1.76 REMARK 500 CZ A ARG A 141 CD B GLU A 144 6554 1.93 REMARK 500 CZ A ARG A 141 OE2B GLU A 144 6554 0.92 REMARK 500 NH1A ARG A 141 NH1B ARG A 148 6554 1.75 REMARK 500 NH1A ARG A 141 OE2B GLU A 144 6554 2.01 REMARK 500 NH2A ARG A 141 OE1A GLU A 144 6554 2.02 REMARK 500 NH2A ARG A 141 CD B GLU A 144 6554 1.85 REMARK 500 NH2A ARG A 141 OE2B GLU A 144 6554 0.86 REMARK 500 NH2B ARG A 145 O HOH A 2277 6554 1.46 REMARK 500 CZ B ARG A 147 NH2A ARG A 259 1655 1.78 REMARK 500 NH1B ARG A 147 CZ A ARG A 259 1655 1.51 REMARK 500 NH1B ARG A 147 NH2A ARG A 259 1655 0.46 REMARK 500 NH1B ARG A 147 NH2C ARG A 259 1655 2.11 REMARK 500 CD A GLU A 188 NH2C ARG A 259 1655 2.00 REMARK 500 OE2A GLU A 188 NH2A ARG A 259 1655 1.94 REMARK 500 OE2A GLU A 188 NH2C ARG A 259 1655 1.33 REMARK 500 O HOH A 2013 O HOH A 2013 4555 1.83 REMARK 500 O HOH A 2014 O HOH A 2014 4555 2.19 REMARK 500 O HOH A 2100 O HOH A 2100 6554 0.41 REMARK 500 O HOH A 2142 O HOH A 2413 1665 2.04 REMARK 500 O HOH A 2265 O HOH A 2288 6554 1.55 REMARK 500 O HOH A 2355 O HOH A 2417 1665 2.12 REMARK 500 O HOH A 2355 O HOH A 2413 1665 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 141 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 36 70.49 -101.88 REMARK 500 LEU A 37 -150.17 -104.62 REMARK 500 SER A 101 -111.05 58.50 REMARK 500 LEU A 251 57.69 -119.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2008 DISTANCE = 5.77 ANGSTROMS REMARK 525 HOH A2053 DISTANCE = 5.82 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A1274 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1275 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1276 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLT A1277 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4UHC RELATED DB: PDB REMARK 900 STRUCTURAL STUDIES OF A THERMOPHILIC ESTERASE FROM REMARK 900 THERMOGUTTA TERRIFONTIS (NATIVE) REMARK 900 RELATED ID: 4UHD RELATED DB: PDB REMARK 900 STRUCTURAL STUDIES OF A THERMOPHILIC ESTERASE FROM REMARK 900 THERMOGUTTA TERRIFONTIS (ACETATE BOUND) REMARK 900 RELATED ID: 4UHF RELATED DB: PDB REMARK 900 STRUCTURAL STUDIES OF A THERMOPHILIC ESTERASE FROM REMARK 900 THERMOGUTTA TERRIFONTIS (L37A MUTANT WITH BUTYRATE BOUND) REMARK 900 RELATED ID: 4UHH RELATED DB: PDB REMARK 900 STRUCTURAL STUDIES OF A THERMOPHILIC ESTERASE FROM REMARK 900 THERMOGUTTA TERRIFONTIS (CACODYLATE COMPLEX) DBREF 4UHE A 1 282 PDB 4UHE 4UHE 1 282 SEQRES 1 A 282 MET ALA GLN ARG VAL LYS ILE THR THR THR ALA THR PRO SEQRES 2 A 282 GLY GLU ILE GLU LEU ALA PHE GLU ASP THR GLY THR GLY SEQRES 3 A 282 LEU PRO VAL LEU LEU VAL HIS GLY PHE PRO LEU ASP ARG SEQRES 4 A 282 THR MET TRP LYS ALA GLN ARG GLU GLU LEU CYS ASP GLU SEQRES 5 A 282 PHE ARG VAL ILE VAL PRO ASP LEU ARG GLY PHE GLY GLU SEQRES 6 A 282 SER GLN VAL ILE PRO GLY VAL ALA THR MET GLU ALA MET SEQRES 7 A 282 ALA ASP ASP LEU ALA GLY LEU CYS ASN HIS LEU GLY LEU SEQRES 8 A 282 THR GLY LYS ILE VAL LEU GLY GLY LEU SER MET GLY GLY SEQRES 9 A 282 TYR VAL ALA PHE ALA PHE ALA ARG LYS TYR ARG ASP ARG SEQRES 10 A 282 LEU ALA GLY LEU ILE LEU CYS ASP THR ARG ALA ARG PRO SEQRES 11 A 282 ASP SER PRO GLU ALA LYS GLU ASN ARG ARG ARG VAL ALA SEQRES 12 A 282 GLU ARG VAL ARG ARG GLU GLY PRO GLY PHE ILE ALA GLU SEQRES 13 A 282 GLU MET ILE PRO ARG LEU CYS CYS GLU SER THR PHE ARG SEQRES 14 A 282 ASN HIS PRO GLU VAL ILE GLU LYS ILE ARG GLN MET ILE SEQRES 15 A 282 LEU SER ALA PRO PRO GLU GLY VAL ALA ALA ALA ALA LEU SEQRES 16 A 282 GLY MET ALA GLU ARG PRO ASP SER THR ASP LEU LEU PRO SEQRES 17 A 282 ALA LEU SER CYS PRO THR LEU VAL LEU VAL GLY GLN PHE SEQRES 18 A 282 ASP ALA ILE SER PRO PRO GLU GLU MET GLU ALA MET ALA SEQRES 19 A 282 ARG THR ILE PRO GLN SER GLN PHE VAL VAL ILE PRO ASP SEQRES 20 A 282 ALA GLY HIS LEU PRO PRO MET GLU GLN PRO GLU ARG VAL SEQRES 21 A 282 THR GLN ALA ILE ARG GLU TRP LEU ARG LYS VAL HIS THR SEQRES 22 A 282 GLU ALA GLY HIS HIS HIS HIS HIS HIS HET PGE A1274 10 HET CL A1275 1 HET CL A1276 1 HET MLT A1277 9 HETNAM MLT D-MALATE HETNAM PGE TRIETHYLENE GLYCOL HETNAM CL CHLORIDE ION HETSYN MLT (2R)-2-HYDROXYBUTANEDIOIC ACID FORMUL 2 MLT C4 H6 O5 FORMUL 3 PGE C6 H14 O4 FORMUL 4 CL 2(CL 1-) FORMUL 5 HOH *462(H2 O) HELIX 1 1 ASP A 38 MET A 41 5 4 HELIX 2 2 TRP A 42 CYS A 50 1 9 HELIX 3 3 THR A 74 GLY A 90 1 17 HELIX 4 4 SER A 101 TYR A 114 1 14 HELIX 5 5 SER A 132 GLY A 150 1 19 HELIX 6 6 PRO A 151 CYS A 163 1 13 HELIX 7 7 CYS A 164 HIS A 171 1 8 HELIX 8 8 HIS A 171 SER A 184 1 14 HELIX 9 9 PRO A 186 ARG A 200 1 15 HELIX 10 10 SER A 203 LEU A 210 5 8 HELIX 11 11 PRO A 226 ARG A 235 1 10 HELIX 12 12 LEU A 251 GLN A 256 1 6 HELIX 13 13 GLN A 256 THR A 273 1 18 SHEET 1 AA 8 GLN A 3 THR A 8 0 SHEET 2 AA 8 GLU A 15 THR A 23 -1 O ILE A 16 N ILE A 7 SHEET 3 AA 8 ARG A 54 PRO A 58 -1 O VAL A 55 N THR A 23 SHEET 4 AA 8 PRO A 28 VAL A 32 1 O VAL A 29 N ILE A 56 SHEET 5 AA 8 ILE A 95 LEU A 100 1 O VAL A 96 N LEU A 30 SHEET 6 AA 8 LEU A 118 CYS A 124 1 N ALA A 119 O ILE A 95 SHEET 7 AA 8 THR A 214 GLY A 219 1 O LEU A 215 N LEU A 123 SHEET 8 AA 8 SER A 240 ILE A 245 1 O GLN A 241 N VAL A 216 CISPEP 1 THR A 12 PRO A 13 0 7.97 CISPEP 2 PHE A 35 PRO A 36 0 -13.10 SITE 1 AC1 8 LYS A 136 ALA A 198 GLU A 199 ARG A 200 SITE 2 AC1 8 HOH A2262 HOH A2459 HOH A2460 HOH A2462 SITE 1 AC2 3 TYR A 105 HOH A2202 HOH A2228 SITE 1 AC3 5 SER A 132 ALA A 135 HOH A2224 HOH A2239 SITE 2 AC3 5 HOH A2321 SITE 1 AC4 11 PHE A 35 SER A 101 MET A 102 TYR A 105 SITE 2 AC4 11 ARG A 139 HIS A 250 HOH A2073 HOH A2201 SITE 3 AC4 11 HOH A2257 HOH A2258 HOH A2311 CRYST1 43.330 43.330 227.060 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023079 0.013324 0.000000 0.00000 SCALE2 0.000000 0.026649 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004404 0.00000 MASTER 454 0 4 13 8 0 8 6 0 0 0 22 END