HEADER UNKNOWN FUNCTION 11-JUL-14 4U09 TITLE STRUCTURE OF LEPTOSPIRA INTERROGANS LRR PROTEIN LIC12759 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIC12759; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LIC12759; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEPTOSPIRA INTERROGANS SEROVAR COPENHAGENI STR. SOURCE 3 FIOCRUZ L1-130; SOURCE 4 ORGANISM_TAXID: 267671; SOURCE 5 GENE: LIC_12759; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDEST17 KEYWDS LRR PROTEIN, PATHOGEN, VIRULENCE FACTOR, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR W.SHEPARD,F.A.SAUL,A.HAOUZ,M.PICARDEAU REVDAT 2 17-JUN-15 4U09 1 JRNL REVDAT 1 03-JUN-15 4U09 0 JRNL AUTH I.MIRAS,F.SAUL,M.NOWAKOWSKI,P.WEBER,A.HAOUZ,W.SHEPARD, JRNL AUTH 2 M.PICARDEAU JRNL TITL STRUCTURAL CHARACTERIZATION OF A NOVEL SUBFAMILY OF JRNL TITL 2 LEUCINE-RICH REPEAT PROTEINS FROM THE HUMAN PATHOGEN JRNL TITL 3 LEPTOSPIRA INTERROGANS. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 1351 2015 JRNL REFN ESSN 1399-0047 JRNL PMID 26057675 JRNL DOI 10.1107/S139900471500704X REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 67774 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.450 REMARK 3 FREE R VALUE TEST SET COUNT : 984 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.00 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.99 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 4919 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2521 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4854 REMARK 3 BIN R VALUE (WORKING SET) : 0.2518 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 1.32 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 65 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6379 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 609 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -22.42370 REMARK 3 B22 (A**2) : 9.15000 REMARK 3 B33 (A**2) : 13.27370 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.246 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.160 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.136 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.154 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.134 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6503 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8774 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2506 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 237 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 838 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6503 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 3 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 841 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 7791 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.15 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.98 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.35 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4U09 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000202604. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.28199 REMARK 200 MONOCHROMATOR : CHANNEL CUT SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67851 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 47.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.90 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.00 REMARK 200 R MERGE FOR SHELL (I) : 0.97400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, 125 MM ZINC ACETATE, 200 MM REMARK 280 MAGNESIUM CHLORIDE, 100 MM MES, PH 6.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.58300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.29850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.39800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.29850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.58300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.39800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 23 REMARK 465 GLU A 24 REMARK 465 GLU A 25 REMARK 465 GLU A 418 REMARK 465 GLY A 419 REMARK 465 GLY A 420 REMARK 465 GLY A 421 REMARK 465 GLY A 422 REMARK 465 GLU A 423 REMARK 465 SER B 23 REMARK 465 GLU B 24 REMARK 465 GLU B 25 REMARK 465 GLY B 422 REMARK 465 GLU B 423 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 74 -114.19 -109.96 REMARK 500 ASN A 120 -162.08 -126.89 REMARK 500 ASN A 143 -159.49 -120.16 REMARK 500 ASN A 189 -159.81 -131.65 REMARK 500 ASN A 212 -154.81 -115.45 REMARK 500 ASN A 235 -158.37 -144.26 REMARK 500 ASN A 258 -157.11 -131.45 REMARK 500 PRO A 264 87.95 -69.83 REMARK 500 ASN A 281 -162.36 -117.17 REMARK 500 HIS A 303 63.67 65.92 REMARK 500 ASN A 304 -155.12 -135.33 REMARK 500 ASN A 327 -157.23 -136.93 REMARK 500 ASN A 350 -153.46 -124.37 REMARK 500 ASN A 373 -156.46 -128.44 REMARK 500 ASN B 74 -114.46 -110.19 REMARK 500 ASN B 120 -162.74 -127.95 REMARK 500 ASN B 143 -160.30 -121.27 REMARK 500 ASN B 189 -157.09 -119.51 REMARK 500 ASN B 212 -152.05 -112.20 REMARK 500 ASN B 235 -159.95 -125.12 REMARK 500 ASN B 258 -155.57 -127.04 REMARK 500 ASN B 281 -153.51 -126.08 REMARK 500 HIS B 303 63.51 62.09 REMARK 500 ASN B 304 -156.85 -136.90 REMARK 500 ASN B 327 -158.17 -135.64 REMARK 500 ASN B 350 -153.16 -121.73 REMARK 500 ASN B 373 -157.16 -127.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 504 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 188 ND1 REMARK 620 2 GLU B 343 OE1 85.4 REMARK 620 3 HOH B 693 O 94.3 103.8 REMARK 620 4 HOH A 666 O 124.8 133.4 107.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 257 OE2 REMARK 620 2 GLU B 369 OE2 111.0 REMARK 620 3 HOH B 681 O 108.1 104.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 303 NE2 REMARK 620 2 ASP B 394 OD2 103.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 369 OE2 REMARK 620 2 GLU A 392 OE1 111.3 REMARK 620 3 HIS B 303 NE2 103.1 127.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 162 OG REMARK 620 2 ASP B 185 OD2 93.4 REMARK 620 3 HOH B 791 O 92.4 124.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 257 OE2 REMARK 620 2 HOH A 662 O 117.3 REMARK 620 3 HOH A 694 O 102.8 93.5 REMARK 620 4 HOH B 727 O 97.9 128.4 115.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 508 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4TZH RELATED DB: PDB REMARK 900 RELATED ID: 4U06 RELATED DB: PDB REMARK 900 RELATED ID: 4U08 RELATED DB: PDB DBREF 4U09 A 23 423 UNP Q72NS0 Q72NS0_LEPIC 23 423 DBREF 4U09 B 23 423 UNP Q72NS0 Q72NS0_LEPIC 23 423 SEQRES 1 A 401 SER GLU GLU ILE GLN LYS PRO TYR LYS ASN LEU ALA LYS SEQRES 2 A 401 ALA LEU GLN ASN PRO ALA ASP VAL ARG ASN LEU ASP LEU SEQRES 3 A 401 SER PHE GLN GLY LEU LYS THR LEU PRO ASN LYS ILE GLY SEQRES 4 A 401 GLN LEU LYS ASN LEU GLN LYS LEU ASP LEU GLY GLY ASN SEQRES 5 A 401 GLU PRO THR ILE LEU SER LYS GLU ILE TRP GLN LEU LYS SEQRES 6 A 401 ASP LEU GLN LYS LEU ASN LEU ASN ASN ASN LYS LEU THR SEQRES 7 A 401 VAL LEU PRO LYS GLU ILE GLY GLN LEU GLN ASN LEU GLN SEQRES 8 A 401 GLU LEU SER LEU HIS SER ASN GLU LEU VAL ASN LEU PRO SEQRES 9 A 401 LYS GLU ILE GLY GLN PHE LYS ASN LEU GLN LYS LEU ASN SEQRES 10 A 401 LEU ASP ASN ASN LYS LEU THR VAL LEU PRO LYS GLU ILE SEQRES 11 A 401 GLY GLN LEU GLN ASN LEU GLN GLU LEU SER LEU LEU SER SEQRES 12 A 401 ASN LYS LEU ILE SER LEU PRO THR GLU ILE GLU GLN LEU SEQRES 13 A 401 LYS SER LEU LYS ASN LEU ASP LEU ASN HIS ASN GLU PHE SEQRES 14 A 401 THR THR VAL SER LYS GLU VAL MSE LEU LEU GLU THR LEU SEQRES 15 A 401 GLU ASN LEU ASP LEU ARG SER ASN LYS LEU LYS THR ILE SEQRES 16 A 401 PRO LYS GLU ILE ARG GLN LEU LYS SER LEU LYS VAL LEU SEQRES 17 A 401 MSE LEU THR GLY ASN GLN LEU THR SER LEU PRO LYS GLU SEQRES 18 A 401 ILE GLU GLN LEU GLN ASN LEU LYS THR LEU ASN LEU GLY SEQRES 19 A 401 GLU ASN ARG PHE GLN ILE PHE PRO VAL GLU ILE LEU GLU SEQRES 20 A 401 LEU LYS ASN LEU LEU GLU LEU ASN LEU TYR TYR ASN GLN SEQRES 21 A 401 LEU VAL GLU PHE PRO LYS GLU VAL GLY GLN LEU LYS SER SEQRES 22 A 401 LEU LYS TYR LEU SER LEU TYR HIS ASN GLN ILE THR THR SEQRES 23 A 401 LEU PRO VAL GLU VAL THR GLN LEU PRO ASP LEU GLN GLU SEQRES 24 A 401 LEU HIS LEU SER GLY ASN LYS ILE THR ILE LEU PRO LYS SEQRES 25 A 401 GLU ILE LEU GLN LEU LYS ASN LEU GLU TRP LEU SER LEU SEQRES 26 A 401 SER ASN ASN LYS LEU ASN ALA LEU PRO LYS GLU ILE GLY SEQRES 27 A 401 GLN LEU LYS LYS LEU GLN ARG LEU GLU LEU GLY ASN ASN SEQRES 28 A 401 GLN LEU THR THR LEU PRO LYS GLU ILE GLU GLN LEU LYS SEQRES 29 A 401 ASN LEU GLN ARG LEU GLU LEU ASP SER ASN PRO ILE SER SEQRES 30 A 401 PRO LYS GLU LYS GLU ARG ILE ARG LYS LEU LEU PRO LYS SEQRES 31 A 401 CYS GLU ILE ASP PHE GLU GLY GLY GLY GLY GLU SEQRES 1 B 401 SER GLU GLU ILE GLN LYS PRO TYR LYS ASN LEU ALA LYS SEQRES 2 B 401 ALA LEU GLN ASN PRO ALA ASP VAL ARG ASN LEU ASP LEU SEQRES 3 B 401 SER PHE GLN GLY LEU LYS THR LEU PRO ASN LYS ILE GLY SEQRES 4 B 401 GLN LEU LYS ASN LEU GLN LYS LEU ASP LEU GLY GLY ASN SEQRES 5 B 401 GLU PRO THR ILE LEU SER LYS GLU ILE TRP GLN LEU LYS SEQRES 6 B 401 ASP LEU GLN LYS LEU ASN LEU ASN ASN ASN LYS LEU THR SEQRES 7 B 401 VAL LEU PRO LYS GLU ILE GLY GLN LEU GLN ASN LEU GLN SEQRES 8 B 401 GLU LEU SER LEU HIS SER ASN GLU LEU VAL ASN LEU PRO SEQRES 9 B 401 LYS GLU ILE GLY GLN PHE LYS ASN LEU GLN LYS LEU ASN SEQRES 10 B 401 LEU ASP ASN ASN LYS LEU THR VAL LEU PRO LYS GLU ILE SEQRES 11 B 401 GLY GLN LEU GLN ASN LEU GLN GLU LEU SER LEU LEU SER SEQRES 12 B 401 ASN LYS LEU ILE SER LEU PRO THR GLU ILE GLU GLN LEU SEQRES 13 B 401 LYS SER LEU LYS ASN LEU ASP LEU ASN HIS ASN GLU PHE SEQRES 14 B 401 THR THR VAL SER LYS GLU VAL MSE LEU LEU GLU THR LEU SEQRES 15 B 401 GLU ASN LEU ASP LEU ARG SER ASN LYS LEU LYS THR ILE SEQRES 16 B 401 PRO LYS GLU ILE ARG GLN LEU LYS SER LEU LYS VAL LEU SEQRES 17 B 401 MSE LEU THR GLY ASN GLN LEU THR SER LEU PRO LYS GLU SEQRES 18 B 401 ILE GLU GLN LEU GLN ASN LEU LYS THR LEU ASN LEU GLY SEQRES 19 B 401 GLU ASN ARG PHE GLN ILE PHE PRO VAL GLU ILE LEU GLU SEQRES 20 B 401 LEU LYS ASN LEU LEU GLU LEU ASN LEU TYR TYR ASN GLN SEQRES 21 B 401 LEU VAL GLU PHE PRO LYS GLU VAL GLY GLN LEU LYS SER SEQRES 22 B 401 LEU LYS TYR LEU SER LEU TYR HIS ASN GLN ILE THR THR SEQRES 23 B 401 LEU PRO VAL GLU VAL THR GLN LEU PRO ASP LEU GLN GLU SEQRES 24 B 401 LEU HIS LEU SER GLY ASN LYS ILE THR ILE LEU PRO LYS SEQRES 25 B 401 GLU ILE LEU GLN LEU LYS ASN LEU GLU TRP LEU SER LEU SEQRES 26 B 401 SER ASN ASN LYS LEU ASN ALA LEU PRO LYS GLU ILE GLY SEQRES 27 B 401 GLN LEU LYS LYS LEU GLN ARG LEU GLU LEU GLY ASN ASN SEQRES 28 B 401 GLN LEU THR THR LEU PRO LYS GLU ILE GLU GLN LEU LYS SEQRES 29 B 401 ASN LEU GLN ARG LEU GLU LEU ASP SER ASN PRO ILE SER SEQRES 30 B 401 PRO LYS GLU LYS GLU ARG ILE ARG LYS LEU LEU PRO LYS SEQRES 31 B 401 CYS GLU ILE ASP PHE GLU GLY GLY GLY GLY GLU MODRES 4U09 MSE A 199 MET MODIFIED RESIDUE MODRES 4U09 MSE A 231 MET MODIFIED RESIDUE MODRES 4U09 MSE B 199 MET MODIFIED RESIDUE MODRES 4U09 MSE B 231 MET MODIFIED RESIDUE HET MSE A 199 8 HET MSE A 231 8 HET MSE B 199 8 HET MSE B 231 8 HET ZN A 501 1 HET ZN A 502 1 HET ZN A 503 1 HET ZN A 504 1 HET MES A 505 12 HET SO4 A 506 5 HET PEG A 507 7 HET ZN B 501 1 HET ZN B 502 1 HET MES B 503 12 HET MES B 504 12 HET CL B 505 1 HET CL B 506 1 HET CL B 507 1 HET CL B 508 1 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM SO4 SULFATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM CL CHLORIDE ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 ZN 6(ZN 2+) FORMUL 7 MES 3(C6 H13 N O4 S) FORMUL 8 SO4 O4 S 2- FORMUL 9 PEG C4 H10 O3 FORMUL 14 CL 4(CL 1-) FORMUL 18 HOH *609(H2 O) HELIX 1 AA1 ASN A 32 ASN A 39 1 8 HELIX 2 AA2 PRO A 40 VAL A 43 5 4 HELIX 3 AA3 PRO A 57 LEU A 63 5 7 HELIX 4 AA4 GLU A 75 LEU A 79 5 5 HELIX 5 AA5 GLU A 82 LEU A 86 5 5 HELIX 6 AA6 PRO A 103 LEU A 109 5 7 HELIX 7 AA7 PRO A 126 PHE A 132 5 7 HELIX 8 AA8 PRO A 149 LEU A 155 5 7 HELIX 9 AA9 PRO A 172 LEU A 178 5 7 HELIX 10 AB1 GLU A 197 LEU A 201 5 5 HELIX 11 AB2 PRO A 218 LEU A 224 5 7 HELIX 12 AB3 PRO A 241 LEU A 247 5 7 HELIX 13 AB4 PRO A 264 LEU A 270 5 7 HELIX 14 AB5 PRO A 287 LEU A 293 5 7 HELIX 15 AB6 PRO A 310 LEU A 316 5 7 HELIX 16 AB7 PRO A 333 LEU A 339 5 7 HELIX 17 AB8 PRO A 356 LEU A 362 5 7 HELIX 18 AB9 PRO A 379 LEU A 385 5 7 HELIX 19 AC1 SER A 399 LEU A 410 1 12 HELIX 20 AC2 ASN B 32 ASN B 39 1 8 HELIX 21 AC3 PRO B 40 VAL B 43 5 4 HELIX 22 AC4 PRO B 57 LEU B 63 5 7 HELIX 23 AC5 GLU B 75 LEU B 79 5 5 HELIX 24 AC6 GLU B 82 LEU B 86 5 5 HELIX 25 AC7 PRO B 103 LEU B 109 5 7 HELIX 26 AC8 PRO B 126 PHE B 132 5 7 HELIX 27 AC9 PRO B 149 LEU B 155 5 7 HELIX 28 AD1 PRO B 172 LEU B 178 5 7 HELIX 29 AD2 SER B 195 LEU B 200 1 6 HELIX 30 AD3 PRO B 218 LEU B 224 5 7 HELIX 31 AD4 PRO B 241 LEU B 247 5 7 HELIX 32 AD5 PRO B 264 LEU B 270 5 7 HELIX 33 AD6 PRO B 287 LEU B 293 5 7 HELIX 34 AD7 PRO B 310 LEU B 316 5 7 HELIX 35 AD8 PRO B 333 LEU B 339 5 7 HELIX 36 AD9 PRO B 356 LEU B 362 5 7 HELIX 37 AE1 PRO B 379 LEU B 385 5 7 HELIX 38 AE2 SER B 399 LEU B 410 1 12 SHEET 1 AA117 ASN A 45 ASP A 47 0 SHEET 2 AA117 LYS A 68 ASP A 70 1 O LYS A 68 N LEU A 46 SHEET 3 AA117 LYS A 91 ASN A 93 1 O ASN A 93 N LEU A 69 SHEET 4 AA117 GLU A 114 SER A 116 1 O SER A 116 N LEU A 92 SHEET 5 AA117 LYS A 137 ASN A 139 1 O ASN A 139 N LEU A 115 SHEET 6 AA117 GLU A 160 SER A 162 1 O SER A 162 N LEU A 138 SHEET 7 AA117 ASN A 183 ASP A 185 1 O ASN A 183 N LEU A 161 SHEET 8 AA117 ASN A 206 ASP A 208 1 O ASP A 208 N LEU A 184 SHEET 9 AA117 VAL A 229 MSE A 231 1 O MSE A 231 N LEU A 207 SHEET 10 AA117 THR A 252 ASN A 254 1 O ASN A 254 N LEU A 230 SHEET 11 AA117 GLU A 275 ASN A 277 1 O ASN A 277 N LEU A 253 SHEET 12 AA117 TYR A 298 SER A 300 1 O SER A 300 N LEU A 276 SHEET 13 AA117 GLU A 321 HIS A 323 1 O HIS A 323 N LEU A 299 SHEET 14 AA117 TRP A 344 SER A 346 1 O TRP A 344 N LEU A 322 SHEET 15 AA117 ARG A 367 GLU A 369 1 O ARG A 367 N LEU A 345 SHEET 16 AA117 ARG A 390 GLU A 392 1 O GLU A 392 N LEU A 368 SHEET 17 AA117 GLU A 414 ASP A 416 1 O ASP A 416 N LEU A 391 SHEET 1 AA217 ASN B 45 ASP B 47 0 SHEET 2 AA217 LYS B 68 ASP B 70 1 O LYS B 68 N LEU B 46 SHEET 3 AA217 LYS B 91 ASN B 93 1 O LYS B 91 N LEU B 69 SHEET 4 AA217 GLU B 114 SER B 116 1 O SER B 116 N LEU B 92 SHEET 5 AA217 LYS B 137 ASN B 139 1 O ASN B 139 N LEU B 115 SHEET 6 AA217 GLU B 160 SER B 162 1 O SER B 162 N LEU B 138 SHEET 7 AA217 ASN B 183 ASP B 185 1 O ASN B 183 N LEU B 161 SHEET 8 AA217 ASN B 206 ASP B 208 1 O ASP B 208 N LEU B 184 SHEET 9 AA217 VAL B 229 MSE B 231 1 O MSE B 231 N LEU B 207 SHEET 10 AA217 THR B 252 ASN B 254 1 O ASN B 254 N LEU B 230 SHEET 11 AA217 GLU B 275 ASN B 277 1 O GLU B 275 N LEU B 253 SHEET 12 AA217 TYR B 298 SER B 300 1 O TYR B 298 N LEU B 276 SHEET 13 AA217 GLU B 321 HIS B 323 1 O HIS B 323 N LEU B 299 SHEET 14 AA217 TRP B 344 SER B 346 1 O TRP B 344 N LEU B 322 SHEET 15 AA217 ARG B 367 GLU B 369 1 O ARG B 367 N LEU B 345 SHEET 16 AA217 ARG B 390 GLU B 392 1 O GLU B 392 N LEU B 368 SHEET 17 AA217 GLU B 414 ASP B 416 1 O ASP B 416 N LEU B 391 LINK ND1 HIS A 188 ZN ZN A 504 1555 1555 2.21 LINK C VAL A 198 N MSE A 199 1555 1555 1.35 LINK C MSE A 199 N LEU A 200 1555 1555 1.35 LINK C LEU A 230 N MSE A 231 1555 1555 1.35 LINK C MSE A 231 N LEU A 232 1555 1555 1.34 LINK OE2 GLU A 257 ZN ZN A 503 1555 1555 2.02 LINK NE2 HIS A 303 ZN ZN A 502 1555 1555 2.06 LINK OE2 GLU A 369 ZN ZN A 501 1555 1555 1.99 LINK OE1 GLU A 392 ZN ZN A 501 1555 1555 1.96 LINK OG SER B 162 ZN ZN B 501 1555 1555 2.44 LINK OD2 ASP B 185 ZN ZN B 501 1555 1555 2.33 LINK C VAL B 198 N MSE B 199 1555 1555 1.34 LINK C MSE B 199 N LEU B 200 1555 1555 1.35 LINK C LEU B 230 N MSE B 231 1555 1555 1.34 LINK C MSE B 231 N LEU B 232 1555 1555 1.34 LINK OE2 GLU B 257 ZN ZN B 502 1555 1555 2.02 LINK NE2 HIS B 303 ZN ZN A 501 1555 1555 1.97 LINK OE1 GLU B 343 ZN ZN A 504 1555 1555 2.26 LINK OE2 GLU B 369 ZN ZN A 503 1555 1555 2.07 LINK OD2 ASP B 394 ZN ZN A 502 1555 1555 2.25 LINK ZN ZN A 503 O HOH B 681 1555 1555 1.93 LINK ZN ZN A 504 O HOH B 693 1555 1555 2.26 LINK ZN ZN A 504 O HOH A 666 1555 1555 2.14 LINK ZN ZN B 501 O HOH B 791 1555 1555 2.53 LINK ZN ZN B 502 O HOH A 662 1555 1555 1.96 LINK ZN ZN B 502 O HOH A 694 1555 1555 2.39 LINK ZN ZN B 502 O HOH B 727 1555 1555 2.35 SITE 1 AC1 4 GLU A 369 GLU A 392 HIS B 303 CL B 508 SITE 1 AC2 5 HIS A 303 GLY B 371 ASP B 394 CL B 505 SITE 2 AC2 5 CL B 507 SITE 1 AC3 4 GLU A 257 GLU B 369 CL B 506 HOH B 681 SITE 1 AC4 5 HIS A 188 HOH A 666 GLU B 343 HOH B 693 SITE 2 AC4 5 HOH B 713 SITE 1 AC5 5 LYS A 28 TYR A 30 LYS A 31 ASN A 32 SITE 2 AC5 5 HOH A 784 SITE 1 AC6 4 TYR A 302 HOH A 736 TYR B 280 CL B 508 SITE 1 AC7 7 TYR A 302 HIS A 323 SER A 325 SER A 346 SITE 2 AC7 7 HOH A 730 TYR B 280 HOH B 728 SITE 1 AC8 3 SER B 162 ASP B 185 HOH B 791 SITE 1 AC9 5 HOH A 662 HOH A 694 HOH A 730 GLU B 257 SITE 2 AC9 5 HOH B 727 SITE 1 AD1 10 TYR A 279 HOH A 660 TYR B 302 HIS B 323 SITE 2 AD1 10 SER B 325 SER B 346 HOH B 710 HOH B 728 SITE 3 AD1 10 HOH B 732 HOH B 739 SITE 1 AD2 7 LYS A 401 LYS B 28 TYR B 30 LYS B 31 SITE 2 AD2 7 ASN B 32 LYS B 35 HOH B 619 SITE 1 AD3 7 TYR A 280 HIS A 303 ZN A 502 GLY B 371 SITE 2 AD3 7 GLU B 392 ASP B 394 CL B 507 SITE 1 AD4 6 GLU A 257 ZN A 503 ARG B 367 LEU B 368 SITE 2 AD4 6 GLU B 369 ARG B 390 SITE 1 AD5 6 ZN A 502 ASN B 349 GLY B 371 ASN B 372 SITE 2 AD5 6 ASP B 394 CL B 505 SITE 1 AD6 4 GLU A 392 ZN A 501 SO4 A 506 HIS B 303 CRYST1 75.166 104.796 116.597 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013304 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009542 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008577 0.00000 MASTER 415 0 19 38 34 0 26 6 0 0 0 62 END