HEADER FLUORESCENT PROTEIN 17-DEC-14 4RYW TITLE CRYSTAL STRUCTURE OF THE PHOTOCONVERTED GREEN FLUORESCENT PROTEIN TITLE 2 NOWGFP_CONV (THE VARIANT OF CYAN CERULEAN) AT PH 7.0 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NOWGFP_CONV; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 3 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FLUORESCENT PROTEIN, PHOTOCONVERTED NOWGFP, TWG CHROMOPHORE, BETA- KEYWDS 2 BARREL, VARIANT OF CYAN CERULEAN EXPDTA X-RAY DIFFRACTION AUTHOR V.Z.PLETNEV,N.V.PLETNEVA,S.V.PLETNEV REVDAT 1 02-SEP-15 4RYW 0 JRNL AUTH V.Z.PLETNEV,N.V.PLETNEVA,K.S.SARKISYAN,A.S.MISHIN, JRNL AUTH 2 K.A.LUKYANOV,E.A.GORYACHEVA,R.H.ZIGANSHIN,Z.DAUTER,S.PLETNEV JRNL TITL STRUCTURE OF THE GREEN FLUORESCENT PROTEIN NOWGFP WITH AN JRNL TITL 2 ANIONIC TRYPTOPHAN-BASED CHROMOPHORE. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 1699 2015 JRNL REFN ISSN 0907-4449 JRNL PMID 26249350 JRNL DOI 10.1107/S1399004715010159 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 21817 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.295 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1182 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1440 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 60 REMARK 3 BIN FREE R VALUE : 0.3820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5427 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.13000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.14000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.384 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.297 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.060 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.841 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5610 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5292 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7562 ; 1.509 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12250 ; 0.765 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 679 ; 7.508 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 259 ;36.479 ;25.251 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 966 ;17.328 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;15.225 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 815 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6277 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1245 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2728 ; 2.318 ; 3.618 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2727 ; 2.318 ; 3.616 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3398 ; 3.618 ; 5.419 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4RYW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JAN-15. REMARK 100 THE RCSB ID CODE IS RCSB087967. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 2014 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23175 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.50200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2WSO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA ACETATE PH=4.5, 30% (V/V) PEG REMARK 280 5000 MONO METHYL ETHER, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.01050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THREE MOLECULES IN THE ASSYMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 ARG A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 VAL A 1 REMARK 465 GLY A 232 REMARK 465 ALA A 233 REMARK 465 ASP A 234 REMARK 465 GLU A 235 REMARK 465 LEU A 236 REMARK 465 SEC A 237 REMARK 465 LYS A 238 REMARK 465 MET B -11 REMARK 465 ARG B -10 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 VAL B 1 REMARK 465 GLY B 232 REMARK 465 ALA B 233 REMARK 465 ASP B 234 REMARK 465 GLU B 235 REMARK 465 LEU B 236 REMARK 465 SEC B 237 REMARK 465 LYS B 238 REMARK 465 MET C -11 REMARK 465 ARG C -10 REMARK 465 GLY C -9 REMARK 465 SER C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 VAL C 1 REMARK 465 GLY C 232 REMARK 465 ALA C 233 REMARK 465 ASP C 234 REMARK 465 GLU C 235 REMARK 465 LEU C 236 REMARK 465 SEC C 237 REMARK 465 LYS C 238 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 21 103.44 -161.29 REMARK 500 TYR A 143 67.65 -102.17 REMARK 500 ASP A 173 21.81 -76.11 REMARK 500 ILE B 136 -64.35 -95.44 REMARK 500 LYS C 3 56.61 -104.89 REMARK 500 ASP C 21 86.19 -162.78 REMARK 500 ASP C 103 -154.95 -155.52 REMARK 500 ILE C 136 -61.44 -96.71 REMARK 500 HIS C 139 47.58 77.04 REMARK 500 ASN C 144 -150.71 -87.51 REMARK 500 GLU C 172 0.22 -63.12 REMARK 500 SER C 175 -167.45 -109.02 REMARK 500 LYS C 206 113.69 -167.82 REMARK 500 PRO C 230 -162.83 -67.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WSO RELATED DB: PDB REMARK 900 CYAN FLUORESCENT PROTEIN, CERULEAN, AT PH ~7 REMARK 999 REMARK 999 SEQUENCE REMARK 999 This construct is a gene engineered variant of the cyan fluorescent REMARK 999 protein Cerulean DBREF 4RYW A -11 238 PDB 4RYW 4RYW -11 238 DBREF 4RYW B -11 238 PDB 4RYW 4RYW -11 238 DBREF 4RYW C -11 238 PDB 4RYW 4RYW -11 238 SEQRES 1 A 248 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER VAL SEQRES 2 A 248 SER LYS GLY GLU LYS LEU PHE THR GLY VAL VAL PRO ILE SEQRES 3 A 248 LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SEQRES 4 A 248 SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR GLY SEQRES 5 A 248 LYS MET SER LEU LYS PHE ILE CYS THR THR GLY LYS LEU SEQRES 6 A 248 PRO VAL PRO TRP PRO THR LEU LYS THR THR LEU CRF MET SEQRES 7 A 248 GLN CYS PHE ALA ARG TYR PRO ASP HIS MET LYS GLN HIS SEQRES 8 A 248 ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN SEQRES 9 A 248 GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN TYR LYS SEQRES 10 A 248 THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL SEQRES 11 A 248 ASN ARG ILE GLU LEU LYS GLY VAL ASP PHE LYS GLU ASP SEQRES 12 A 248 GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN ALA ILE SEQRES 13 A 248 SER GLY ASN ALA ASN ILE THR ALA ASP LYS GLN LYS ASN SEQRES 14 A 248 GLY ILE LYS ALA TYR PHE THR ILE ARG HIS ASP VAL GLU SEQRES 15 A 248 ASP GLY SER VAL LEU LEU ALA ASP HIS TYR GLN GLN ASN SEQRES 16 A 248 THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN SEQRES 17 A 248 HIS TYR LEU SER THR GLN SER LYS GLN SER LYS ASP PRO SEQRES 18 A 248 ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE VAL SEQRES 19 A 248 THR ALA ALA GLY ILE PRO LEU GLY ALA ASP GLU LEU SEC SEQRES 20 A 248 LYS SEQRES 1 B 248 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER VAL SEQRES 2 B 248 SER LYS GLY GLU LYS LEU PHE THR GLY VAL VAL PRO ILE SEQRES 3 B 248 LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SEQRES 4 B 248 SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR GLY SEQRES 5 B 248 LYS MET SER LEU LYS PHE ILE CYS THR THR GLY LYS LEU SEQRES 6 B 248 PRO VAL PRO TRP PRO THR LEU LYS THR THR LEU CRF MET SEQRES 7 B 248 GLN CYS PHE ALA ARG TYR PRO ASP HIS MET LYS GLN HIS SEQRES 8 B 248 ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN SEQRES 9 B 248 GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN TYR LYS SEQRES 10 B 248 THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL SEQRES 11 B 248 ASN ARG ILE GLU LEU LYS GLY VAL ASP PHE LYS GLU ASP SEQRES 12 B 248 GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN ALA ILE SEQRES 13 B 248 SER GLY ASN ALA ASN ILE THR ALA ASP LYS GLN LYS ASN SEQRES 14 B 248 GLY ILE LYS ALA TYR PHE THR ILE ARG HIS ASP VAL GLU SEQRES 15 B 248 ASP GLY SER VAL LEU LEU ALA ASP HIS TYR GLN GLN ASN SEQRES 16 B 248 THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN SEQRES 17 B 248 HIS TYR LEU SER THR GLN SER LYS GLN SER LYS ASP PRO SEQRES 18 B 248 ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE VAL SEQRES 19 B 248 THR ALA ALA GLY ILE PRO LEU GLY ALA ASP GLU LEU SEC SEQRES 20 B 248 LYS SEQRES 1 C 248 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER VAL SEQRES 2 C 248 SER LYS GLY GLU LYS LEU PHE THR GLY VAL VAL PRO ILE SEQRES 3 C 248 LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SEQRES 4 C 248 SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR GLY SEQRES 5 C 248 LYS MET SER LEU LYS PHE ILE CYS THR THR GLY LYS LEU SEQRES 6 C 248 PRO VAL PRO TRP PRO THR LEU LYS THR THR LEU CRF MET SEQRES 7 C 248 GLN CYS PHE ALA ARG TYR PRO ASP HIS MET LYS GLN HIS SEQRES 8 C 248 ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN SEQRES 9 C 248 GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN TYR LYS SEQRES 10 C 248 THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL SEQRES 11 C 248 ASN ARG ILE GLU LEU LYS GLY VAL ASP PHE LYS GLU ASP SEQRES 12 C 248 GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN ALA ILE SEQRES 13 C 248 SER GLY ASN ALA ASN ILE THR ALA ASP LYS GLN LYS ASN SEQRES 14 C 248 GLY ILE LYS ALA TYR PHE THR ILE ARG HIS ASP VAL GLU SEQRES 15 C 248 ASP GLY SER VAL LEU LEU ALA ASP HIS TYR GLN GLN ASN SEQRES 16 C 248 THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN SEQRES 17 C 248 HIS TYR LEU SER THR GLN SER LYS GLN SER LYS ASP PRO SEQRES 18 C 248 ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE VAL SEQRES 19 C 248 THR ALA ALA GLY ILE PRO LEU GLY ALA ASP GLU LEU SEC SEQRES 20 C 248 LYS MODRES 4RYW CRF A 65 THR MODRES 4RYW CRF A 65 TRP MODRES 4RYW CRF A 65 GLY MODRES 4RYW CRF B 65 THR MODRES 4RYW CRF B 65 TRP MODRES 4RYW CRF B 65 GLY MODRES 4RYW CRF C 65 THR MODRES 4RYW CRF C 65 TRP MODRES 4RYW CRF C 65 GLY HET CRF A 65 24 HET CRF B 65 24 HET CRF C 65 24 HET GOL A 301 6 HET GOL A 302 6 HET GOL B 301 6 HET GOL B 302 6 HET GOL B 303 6 HET GOL B 304 6 HET GOL C 301 6 HET GOL C 302 6 HET GOL C 303 6 HETNAM CRF [(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL- HETNAM 2 CRF 3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRF YL]ACETIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CRF 3(C17 H18 N4 O4) FORMUL 4 GOL 9(C3 H8 O3) FORMUL 13 HOH *164(H2 O) HELIX 1 1 SER A 2 THR A 9 5 8 HELIX 2 2 PRO A 56 LEU A 60 5 5 HELIX 3 3 MET A 68 ALA A 72 5 5 HELIX 4 4 PRO A 75 HIS A 81 5 7 HELIX 5 5 ASP A 82 ALA A 87 1 6 HELIX 6 6 LYS A 156 ASN A 159 5 4 HELIX 7 7 GLY B 4 THR B 9 5 6 HELIX 8 8 ALA B 37 TYR B 39 5 3 HELIX 9 9 PRO B 56 LEU B 60 5 5 HELIX 10 10 MET B 68 ALA B 72 5 5 HELIX 11 11 PRO B 75 HIS B 81 5 7 HELIX 12 12 ASP B 82 ALA B 87 1 6 HELIX 13 13 GLY C 4 THR C 9 5 6 HELIX 14 14 ALA C 37 TYR C 39 5 3 HELIX 15 15 PRO C 56 LYS C 61 5 6 HELIX 16 16 MET C 68 ALA C 72 5 5 HELIX 17 17 PRO C 75 HIS C 81 5 7 HELIX 18 18 ASP C 82 ALA C 87 1 6 SHEET 1 A12 VAL A 11 VAL A 22 0 SHEET 2 A12 HIS A 25 ASP A 36 -1 O GLY A 31 N VAL A 16 SHEET 3 A12 LYS A 41 CYS A 48 -1 O LYS A 41 N ASP A 36 SHEET 4 A12 HIS A 217 ALA A 227 -1 O GLU A 222 N MET A 42 SHEET 5 A12 HIS A 199 SER A 208 -1 N GLN A 204 O PHE A 223 SHEET 6 A12 GLY A 148 ASP A 155 -1 N ILE A 152 O HIS A 199 SHEET 7 A12 GLY A 160 ASP A 170 -1 O GLY A 160 N ASP A 155 SHEET 8 A12 VAL A 176 PRO A 187 -1 O ASN A 185 N ILE A 161 SHEET 9 A12 TYR A 92 PHE A 100 -1 N VAL A 93 O THR A 186 SHEET 10 A12 ASN A 105 GLU A 115 -1 O TYR A 106 N ILE A 98 SHEET 11 A12 THR A 118 VAL A 128 -1 O LYS A 126 N LYS A 107 SHEET 12 A12 VAL A 11 VAL A 22 1 N ASP A 19 O ILE A 123 SHEET 1 B12 VAL B 12 VAL B 22 0 SHEET 2 B12 HIS B 25 ASP B 36 -1 O PHE B 27 N GLY B 20 SHEET 3 B12 LYS B 41 CYS B 48 -1 O LYS B 41 N ASP B 36 SHEET 4 B12 HIS B 217 ALA B 227 -1 O LEU B 220 N LEU B 44 SHEET 5 B12 HIS B 199 SER B 208 -1 N SER B 202 O THR B 225 SHEET 6 B12 GLY B 148 ASP B 155 -1 N GLY B 148 O THR B 203 SHEET 7 B12 GLY B 160 ASP B 170 -1 O LYS B 162 N THR B 153 SHEET 8 B12 VAL B 176 PRO B 187 -1 O LEU B 177 N HIS B 169 SHEET 9 B12 TYR B 92 PHE B 100 -1 N GLU B 95 O GLN B 184 SHEET 10 B12 ASN B 105 GLU B 115 -1 O TYR B 106 N ILE B 98 SHEET 11 B12 THR B 118 VAL B 128 -1 O GLU B 124 N ARG B 109 SHEET 12 B12 VAL B 12 VAL B 22 1 N GLU B 17 O ILE B 123 SHEET 1 C13 GLN C 207 SER C 208 0 SHEET 2 C13 HIS C 217 ALA C 227 -1 O VAL C 219 N SER C 208 SHEET 3 C13 HIS C 199 GLN C 204 -1 N SER C 202 O THR C 225 SHEET 4 C13 GLY C 148 ASP C 155 -1 N ILE C 152 O HIS C 199 SHEET 5 C13 GLY C 160 VAL C 171 -1 O GLY C 160 N ASP C 155 SHEET 6 C13 SER C 175 PRO C 187 -1 O ALA C 179 N ILE C 167 SHEET 7 C13 TYR C 92 PHE C 100 -1 N GLU C 95 O GLN C 184 SHEET 8 C13 ASN C 105 GLU C 115 -1 O ALA C 110 N GLN C 94 SHEET 9 C13 THR C 118 VAL C 128 -1 O VAL C 120 N LYS C 113 SHEET 10 C13 VAL C 12 VAL C 22 1 N GLU C 17 O ILE C 123 SHEET 11 C13 HIS C 25 ASP C 36 -1 O GLY C 35 N VAL C 12 SHEET 12 C13 LYS C 41 CYS C 48 -1 O LYS C 41 N ASP C 36 SHEET 13 C13 HIS C 217 ALA C 227 -1 O MET C 218 N PHE C 46 LINK C LEU A 64 N1 CRF A 65 1555 1555 1.34 LINK C3 CRF A 65 N MET A 68 1555 1555 1.33 LINK C LEU B 64 N1 CRF B 65 1555 1555 1.34 LINK C3 CRF B 65 N MET B 68 1555 1555 1.33 LINK C LEU C 64 N1 CRF C 65 1555 1555 1.34 LINK C3 CRF C 65 N MET C 68 1555 1555 1.33 CISPEP 1 MET A 88 PRO A 89 0 10.22 CISPEP 2 MET B 88 PRO B 89 0 8.58 CISPEP 3 MET C 88 PRO C 89 0 5.93 SITE 1 AC1 3 ASN A 23 ASP A 129 ASP C 129 SITE 1 AC2 4 GLU A 142 TYR A 143 GLU A 172 HOH A 455 SITE 1 AC3 8 GLU B 5 ALA B 37 ALA B 72 ARG B 73 SITE 2 AC3 8 TYR B 74 LYS B 79 LYS B 85 HOH B 448 SITE 1 AC4 10 SER B 86 ALA B 87 GLU B 90 GLY B 91 SITE 2 AC4 10 PRO B 187 ILE B 188 GLY B 189 GLY B 191 SITE 3 AC4 10 PRO B 192 VAL B 193 SITE 1 AC5 7 ASP A 36 TYR A 39 LYS A 41 LYS B 113 SITE 2 AC5 7 GLU B 115 VAL B 120 ARG B 122 SITE 1 AC6 2 LYS C 131 ASP C 133 SITE 1 AC7 3 GLU C 32 LYS C 45 HOH C 411 SITE 1 AC8 9 ASN C 159 PRO C 187 GLY C 189 ASP C 190 SITE 2 AC8 9 GLY C 191 HOH C 416 HOH C 420 HOH C 424 SITE 3 AC8 9 HOH C 440 CRYST1 52.132 98.021 71.671 90.00 111.63 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019182 0.000000 0.007606 0.00000 SCALE2 0.000000 0.010202 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015009 0.00000 MASTER 386 0 12 18 37 0 14 6 0 0 0 60 END