HEADER LYASE 28-OCT-14 4ROP TITLE CRYSTAL STRUCTURE OF ENOLASE FROM SYNECHOCOCCUS ELONGATUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 2-PHOSPHO-D-GLYCERATE HYDRO-LYASE, 2-PHOSPHOGLYCERATE COMPND 5 DEHYDRATASE; COMPND 6 EC: 4.2.1.11; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCOCCUS ELONGATUS; SOURCE 3 ORGANISM_TAXID: 269084; SOURCE 4 STRAIN: ATCC 27144 / PCC 6301 / SAUG 1402/1; SOURCE 5 GENE: ENO, SYC0886_C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENOLASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR J.M.GONZALEZ,R.MARTI-ARBONA,C.J.UNKEFER REVDAT 1 17-DEC-14 4ROP 0 JRNL AUTH J.M.GONZALEZ,R.MARTI-ARBONA,C.J.UNKEFER JRNL TITL CRYSTAL STRUCTURE OF ENOLASE FROM SYNECHOCOCCUS ELONGATUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 30631 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1561 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2261 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 114 REMARK 3 BIN FREE R VALUE : 0.3710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3108 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 147 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.48000 REMARK 3 B22 (A**2) : -1.48000 REMARK 3 B33 (A**2) : 2.95000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.180 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.156 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.132 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.199 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3163 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3027 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4301 ; 1.848 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6950 ; 0.933 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 425 ; 6.658 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 131 ;42.327 ;25.115 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 507 ;15.558 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;21.666 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 504 ; 0.118 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3686 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 670 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1697 ; 2.940 ; 3.614 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1696 ; 2.934 ; 3.612 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2120 ; 3.733 ; 5.406 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2121 ; 3.735 ; 5.408 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1466 ; 4.190 ; 4.014 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1467 ; 4.188 ; 4.015 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2180 ; 6.063 ; 5.869 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 14303 ; 7.133 ;35.037 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 14218 ; 7.092 ;34.985 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4ROP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-OCT-14. REMARK 100 THE RCSB ID CODE IS RCSB087606. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.127092 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32192 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 116.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG200, 200MM CALCIUM ACETATE, REMARK 280 0.1M HEPES, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 82.14100 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 82.14100 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 37.75000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 82.14100 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 82.14100 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 37.75000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 82.14100 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 82.14100 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 37.75000 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 82.14100 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 82.14100 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 37.75000 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 82.14100 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 82.14100 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 37.75000 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 82.14100 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 82.14100 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 37.75000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 82.14100 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 82.14100 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 37.75000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 82.14100 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 82.14100 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 37.75000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 23920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 103780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -285.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 75.50000 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 75.50000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 75.50000 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 75.50000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 503 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 655 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 743 LIES ON A SPECIAL POSITION. REMARK 375 CA CA A 502 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 742 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ASP A 3 REMARK 465 ASP A 4 REMARK 465 GLY A 429 REMARK 465 ARG A 430 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 5 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 47 OG REMARK 470 LYS A 108 CG CD CE NZ REMARK 470 LYS A 195 CD CE NZ REMARK 470 LYS A 198 CD CE NZ REMARK 470 LYS A 254 CE NZ REMARK 470 ASP A 261 CG OD1 OD2 REMARK 470 VAL A 263 CG1 CG2 REMARK 470 GLN A 280 CD OE1 NE2 REMARK 470 GLN A 303 CG CD OE1 NE2 REMARK 470 LYS A 428 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 19 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP A 19 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG A 21 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG A 368 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 405 NE - CZ - NH1 ANGL. DEV. = 9.3 DEGREES REMARK 500 ARG A 405 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 17 -169.18 -122.08 REMARK 500 ALA A 248 56.71 38.03 REMARK 500 ASN A 255 75.29 2.14 REMARK 500 ASP A 261 -128.73 61.68 REMARK 500 ASP A 314 -81.90 -111.66 REMARK 500 SER A 393 -156.16 -91.15 REMARK 500 ARG A 396 121.53 84.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASN A 106 23.7 L L OUTSIDE RANGE REMARK 500 VAL A 278 24.9 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 713 DISTANCE = 6.90 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 504 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 627 O REMARK 620 2 ASP A 314 OD2 104.6 REMARK 620 3 HOH A 642 O 76.9 112.4 REMARK 620 4 GLU A 287 OE2 169.5 85.2 103.3 REMARK 620 5 ASP A 246 OD2 88.4 164.9 77.7 81.4 REMARK 620 6 HOH A 641 O 84.3 95.6 149.3 91.0 77.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 731 O REMARK 620 2 HOH A 732 O 109.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 636 O REMARK 620 2 ASN A 162 O 157.0 REMARK 620 3 HOH A 634 O 84.9 72.8 REMARK 620 4 HOH A 635 O 100.3 68.7 73.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 506 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 741 O REMARK 620 2 SER A 129 O 74.9 REMARK 620 3 HOH A 740 O 88.6 160.3 REMARK 620 4 HOH A 746 O 80.6 85.4 81.3 REMARK 620 5 HOH A 668 O 134.2 70.1 129.5 123.8 REMARK 620 6 HOH A 745 O 58.2 83.8 96.7 138.9 89.1 REMARK 620 7 HOH A 742 O 125.5 103.3 77.4 45.5 91.2 172.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 505 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 671 O REMARK 620 2 GLU A 415 OE1 98.5 REMARK 620 3 GLU A 415 OE2 62.6 45.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 506 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ROQ RELATED DB: PDB REMARK 900 RELATED ID: 4ROR RELATED DB: PDB REMARK 900 RELATED ID: 4ROS RELATED DB: PDB DBREF 4ROP A 1 430 UNP Q5N3P4 ENO_SYNP6 1 430 SEQRES 1 A 430 MET PRO ASP ASP TYR GLY THR GLN ILE ALA GLU ILE THR SEQRES 2 A 430 ALA ARG GLU ILE LEU ASP SER ARG GLY ARG PRO THR VAL SEQRES 3 A 430 GLU ALA GLU VAL HIS LEU GLU ASP GLY SER VAL GLY LEU SEQRES 4 A 430 ALA GLN VAL PRO SER GLY ALA SER THR GLY THR PHE GLU SEQRES 5 A 430 ALA HIS GLU LEU ARG ASP ASP ASP PRO SER ARG TYR GLY SEQRES 6 A 430 GLY LYS GLY VAL GLN LYS ALA VAL GLU ASN VAL SER ALA SEQRES 7 A 430 ILE GLU ASP ALA LEU ILE GLY LEU SER ALA LEU ASP GLN SEQRES 8 A 430 GLU GLY LEU ASP LYS ALA MET ILE ALA LEU ASP GLY THR SEQRES 9 A 430 PRO ASN LYS LYS ASN LEU GLY ALA ASN ALA ILE LEU ALA SEQRES 10 A 430 VAL SER LEU ALA THR ALA HIS ALA ALA ALA THR SER LEU SEQRES 11 A 430 ASN LEU PRO LEU TYR ARG TYR LEU GLY GLY PRO LEU ALA SEQRES 12 A 430 ASN VAL LEU PRO VAL PRO MET MET ASN VAL ILE ASN GLY SEQRES 13 A 430 GLY ALA HIS ALA ASP ASN ASN VAL ASP PHE GLN GLU PHE SEQRES 14 A 430 MET ILE MET PRO VAL GLY ALA PRO SER PHE LYS GLU ALA SEQRES 15 A 430 LEU ARG TRP GLY ALA GLU VAL PHE HIS ALA LEU ALA LYS SEQRES 16 A 430 VAL LEU LYS ASP LYS GLY LEU ALA THR GLY VAL GLY ASP SEQRES 17 A 430 GLU GLY GLY PHE ALA PRO ASN LEU GLY SER ASN LYS GLU SEQRES 18 A 430 ALA LEU GLU LEU LEU LEU THR ALA ILE GLU ALA ALA GLY SEQRES 19 A 430 TYR LYS PRO GLY GLU GLN VAL ALA LEU ALA MET ASP VAL SEQRES 20 A 430 ALA SER SER GLU PHE TYR LYS ASN GLY LEU TYR THR CYS SEQRES 21 A 430 ASP GLY VAL SER HIS GLU PRO ALA GLY MET ILE GLY ILE SEQRES 22 A 430 LEU ALA ASP LEU VAL SER GLN TYR PRO ILE VAL SER ILE SEQRES 23 A 430 GLU ASP GLY LEU GLN GLU ASP ASP TRP SER ASN TRP LYS SEQRES 24 A 430 THR LEU THR GLN GLN LEU GLY SER THR VAL GLN LEU VAL SEQRES 25 A 430 GLY ASP ASP LEU PHE VAL THR ASN PRO ASP ARG LEU GLN SEQRES 26 A 430 SER GLY ILE GLU GLN GLY VAL GLY ASN ALA VAL LEU ILE SEQRES 27 A 430 LYS LEU ASN GLN ILE GLY THR LEU THR GLU THR LEU ARG SEQRES 28 A 430 THR ILE ASP LEU ALA THR ARG SER GLY TYR ARG SER VAL SEQRES 29 A 430 ILE SER HIS ARG SER GLY GLU THR GLU ASP THR THR ILE SEQRES 30 A 430 ALA ASP LEU ALA VAL ALA THR ARG ALA GLY GLN ILE LYS SEQRES 31 A 430 THR GLY SER LEU SER ARG SER GLU ARG ILE ALA LYS TYR SEQRES 32 A 430 ASN ARG LEU LEU ARG ILE GLU ALA ALA LEU GLY GLU ASN SEQRES 33 A 430 ALA LEU TYR ALA GLY ALA ILE GLY LEU GLY PRO LYS GLY SEQRES 34 A 430 ARG HET CA A 501 1 HET CA A 502 1 HET CL A 503 1 HET MG A 504 1 HET CA A 505 1 HET CA A 506 1 HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION FORMUL 2 CA 4(CA 2+) FORMUL 4 CL CL 1- FORMUL 5 MG MG 2+ FORMUL 8 HOH *147(H2 O) HELIX 1 1 ARG A 63 LYS A 67 5 5 HELIX 2 2 VAL A 69 ILE A 84 1 16 HELIX 3 3 ASP A 90 GLY A 103 1 14 HELIX 4 4 GLY A 111 LEU A 130 1 20 HELIX 5 5 PRO A 133 GLY A 140 1 8 HELIX 6 6 PRO A 141 ALA A 143 5 3 HELIX 7 7 GLY A 157 ALA A 160 5 4 HELIX 8 8 SER A 178 LYS A 200 1 23 HELIX 9 9 SER A 218 ALA A 233 1 16 HELIX 10 10 ALA A 248 GLU A 251 5 4 HELIX 11 11 GLU A 266 TYR A 281 1 16 HELIX 12 12 ASP A 294 GLY A 306 1 13 HELIX 13 13 ASN A 320 GLY A 331 1 12 HELIX 14 14 LYS A 339 GLY A 344 1 6 HELIX 15 15 THR A 345 SER A 359 1 15 HELIX 16 16 THR A 375 THR A 384 1 10 HELIX 17 17 ARG A 396 GLY A 414 1 19 HELIX 18 18 GLU A 415 ALA A 417 5 3 HELIX 19 19 GLY A 421 ILE A 423 5 3 SHEET 1 A 3 ILE A 9 LEU A 18 0 SHEET 2 A 3 PRO A 24 LEU A 32 -1 O HIS A 31 N ALA A 10 SHEET 3 A 3 VAL A 37 GLN A 41 -1 O GLY A 38 N VAL A 30 SHEET 1 B 2 VAL A 145 LEU A 146 0 SHEET 2 B 2 LEU A 418 TYR A 419 1 O LEU A 418 N LEU A 146 SHEET 1 C 9 VAL A 148 ASN A 155 0 SHEET 2 C 9 GLU A 168 MET A 172 -1 O ILE A 171 N MET A 151 SHEET 3 C 9 ALA A 242 ASP A 246 -1 O ALA A 244 N MET A 170 SHEET 4 C 9 ILE A 283 GLU A 287 1 O VAL A 284 N LEU A 243 SHEET 5 C 9 GLN A 310 GLY A 313 1 O GLN A 310 N ILE A 286 SHEET 6 C 9 ALA A 335 ILE A 338 1 O ALA A 335 N GLY A 313 SHEET 7 C 9 ARG A 362 SER A 366 1 O VAL A 364 N ILE A 338 SHEET 8 C 9 GLY A 387 GLY A 392 1 O LYS A 390 N ILE A 365 SHEET 9 C 9 VAL A 148 ASN A 155 1 N MET A 150 O ILE A 389 SHEET 1 D 3 TYR A 253 LYS A 254 0 SHEET 2 D 3 LEU A 257 CYS A 260 -1 O LEU A 257 N LYS A 254 SHEET 3 D 3 VAL A 263 HIS A 265 -1 O VAL A 263 N CYS A 260 LINK MG MG A 504 O HOH A 627 1555 1555 1.98 LINK OD2 ASP A 314 MG MG A 504 1555 1555 2.10 LINK MG MG A 504 O HOH A 642 1555 1555 2.14 LINK OE2 GLU A 287 MG MG A 504 1555 1555 2.19 LINK CA CA A 502 O HOH A 731 1555 1555 2.20 LINK OD2 ASP A 246 MG MG A 504 1555 1555 2.24 LINK CA CA A 502 O HOH A 732 1555 1555 2.29 LINK CA CA A 501 O HOH A 636 1555 1555 2.33 LINK MG MG A 504 O HOH A 641 1555 1555 2.34 LINK CA CA A 506 O HOH A 741 1555 1555 2.36 LINK O ASN A 162 CA CA A 501 1555 1555 2.39 LINK O SER A 129 CA CA A 506 1555 1555 2.50 LINK CA CA A 506 O HOH A 740 1555 1555 2.59 LINK CA CA A 505 O HOH A 671 1555 1555 2.62 LINK CA CA A 506 O HOH A 746 1555 1555 2.63 LINK CA CA A 501 O HOH A 634 1555 1555 2.64 LINK CA CA A 506 O HOH A 668 1555 1555 2.72 LINK OE1 GLU A 415 CA CA A 505 1555 1555 2.75 LINK CA CA A 501 O HOH A 635 1555 1555 2.76 LINK CA CA A 506 O HOH A 745 1555 1555 2.82 LINK OE2 GLU A 415 CA CA A 505 1555 1555 2.88 LINK CA CA A 506 O HOH A 742 1555 1555 3.20 SITE 1 AC1 4 ASN A 162 HOH A 634 HOH A 635 HOH A 636 SITE 1 AC2 3 GLU A 231 HOH A 731 HOH A 732 SITE 1 AC3 1 ARG A 385 SITE 1 AC4 6 ASP A 246 GLU A 287 ASP A 314 HOH A 627 SITE 2 AC4 6 HOH A 641 HOH A 642 SITE 1 AC5 2 GLU A 415 HOH A 671 SITE 1 AC6 6 SER A 129 HOH A 668 HOH A 740 HOH A 741 SITE 2 AC6 6 HOH A 745 HOH A 746 CRYST1 164.282 164.282 75.500 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006087 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006087 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013245 0.00000 MASTER 511 0 6 19 17 0 8 6 0 0 0 34 END