HEADER TRANSCRIPTION 30-SEP-14 4RGX TITLE CRYSTAL STRUCTURE OF PUTATIVE MARR FAMILY TRANSCRIPTIONAL REGULATOR TITLE 2 HCAR FROM ACINETOBACTER SP. ADP COMPLEXED WITH 3,4-DIHYDROXY BEZOIC TITLE 3 ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: REPRESSOR PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: REPRESSOR PROTEIN OF THE HYDROXYCINNAMATE (HCA) CATABOLIC COMPND 5 GENES; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER SP. ADP1; SOURCE 3 ORGANISM_TAXID: 62977; SOURCE 4 GENE: ACIAD1728, HCAR; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) GOLD; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG19C KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, WINGED HELIX-TURN-HELIX, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,G.JOACHIMIAK,L.BIGELOW,G.COBB,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 2 22-NOV-17 4RGX 1 REMARK REVDAT 1 04-MAR-15 4RGX 0 JRNL AUTH Y.KIM,G.JOACHIMIAK,L.BIGELOW,G.COBB,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE MARR FAMILY TRANSCRIPTIONAL JRNL TITL 2 REGULATOR HCAR FROM ACINETOBACTER SP. ADP COMPLEXED WITH JRNL TITL 3 3,4-DIHYDROXY BEZOIC ACID JRNL REF TO BE PUBLISHED 2014 JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1745) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 19862 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1014 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.7884 - 4.0185 1.00 2863 148 0.1548 0.1853 REMARK 3 2 4.0185 - 3.1903 1.00 2750 139 0.1572 0.2090 REMARK 3 3 3.1903 - 2.7872 1.00 2702 148 0.1852 0.2566 REMARK 3 4 2.7872 - 2.5325 1.00 2681 144 0.1844 0.2301 REMARK 3 5 2.5325 - 2.3510 1.00 2661 147 0.1769 0.2435 REMARK 3 6 2.3510 - 2.2124 0.98 2639 144 0.2176 0.2714 REMARK 3 7 2.2124 - 2.1016 0.97 2552 144 0.2196 0.2724 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.09 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2292 REMARK 3 ANGLE : 0.920 3110 REMARK 3 CHIRALITY : 0.058 367 REMARK 3 PLANARITY : 0.004 403 REMARK 3 DIHEDRAL : 15.393 891 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2957 8.4933 63.3892 REMARK 3 T TENSOR REMARK 3 T11: 0.8035 T22: 0.8394 REMARK 3 T33: 0.7955 T12: 0.0948 REMARK 3 T13: -0.0242 T23: 0.0488 REMARK 3 L TENSOR REMARK 3 L11: 7.1481 L22: 5.3567 REMARK 3 L33: 4.6047 L12: -5.0015 REMARK 3 L13: 4.1308 L23: -0.8582 REMARK 3 S TENSOR REMARK 3 S11: -1.4927 S12: -0.5978 S13: -2.2260 REMARK 3 S21: 2.8151 S22: 1.1402 S23: -0.6998 REMARK 3 S31: -0.2576 S32: -0.0475 S33: 0.3764 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 17 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7291 20.9198 45.7761 REMARK 3 T TENSOR REMARK 3 T11: 0.2575 T22: 0.2725 REMARK 3 T33: 0.2703 T12: 0.0638 REMARK 3 T13: 0.0287 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 3.1742 L22: 9.2890 REMARK 3 L33: 4.2532 L12: -0.4361 REMARK 3 L13: 1.3239 L23: -6.0390 REMARK 3 S TENSOR REMARK 3 S11: -0.2083 S12: -0.0904 S13: 0.1920 REMARK 3 S21: 0.5245 S22: 0.2840 S23: 0.1078 REMARK 3 S31: -0.4397 S32: -0.0385 S33: -0.0223 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8743 19.0904 33.2659 REMARK 3 T TENSOR REMARK 3 T11: 0.2189 T22: 0.3006 REMARK 3 T33: 0.3056 T12: 0.0295 REMARK 3 T13: 0.0399 T23: 0.0376 REMARK 3 L TENSOR REMARK 3 L11: 9.1471 L22: 7.9520 REMARK 3 L33: 6.8301 L12: 3.2432 REMARK 3 L13: 2.1894 L23: 2.9680 REMARK 3 S TENSOR REMARK 3 S11: -0.0932 S12: -0.1383 S13: -0.3697 REMARK 3 S21: -0.0887 S22: -0.1045 S23: -0.2025 REMARK 3 S31: 0.0322 S32: 0.0307 S33: 0.1713 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0677 12.8319 38.2481 REMARK 3 T TENSOR REMARK 3 T11: 0.4295 T22: 0.5439 REMARK 3 T33: 0.4763 T12: 0.0386 REMARK 3 T13: 0.0661 T23: 0.1171 REMARK 3 L TENSOR REMARK 3 L11: 2.7002 L22: 5.7275 REMARK 3 L33: 3.4429 L12: 3.4171 REMARK 3 L13: 2.2513 L23: 1.3735 REMARK 3 S TENSOR REMARK 3 S11: 0.1067 S12: -0.9256 S13: -0.8738 REMARK 3 S21: 0.7660 S22: -0.0321 S23: 0.0527 REMARK 3 S31: 1.0829 S32: -0.7466 S33: 0.0545 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7668 21.1330 29.9011 REMARK 3 T TENSOR REMARK 3 T11: 0.2361 T22: 0.4015 REMARK 3 T33: 0.3287 T12: 0.0915 REMARK 3 T13: -0.0106 T23: 0.0405 REMARK 3 L TENSOR REMARK 3 L11: 7.0831 L22: 5.3339 REMARK 3 L33: 9.1402 L12: 1.0392 REMARK 3 L13: -0.5160 L23: -0.7258 REMARK 3 S TENSOR REMARK 3 S11: -0.3690 S12: -0.2816 S13: -0.0714 REMARK 3 S21: 0.1932 S22: 0.1245 S23: 0.5348 REMARK 3 S31: -0.1292 S32: -0.5035 S33: 0.2000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4910 4.1747 24.9230 REMARK 3 T TENSOR REMARK 3 T11: 1.3820 T22: 0.8172 REMARK 3 T33: 1.4786 T12: -0.1990 REMARK 3 T13: 0.0831 T23: 0.1187 REMARK 3 L TENSOR REMARK 3 L11: 5.5361 L22: 4.4595 REMARK 3 L33: 7.9009 L12: -4.3185 REMARK 3 L13: -4.8552 L23: 1.7922 REMARK 3 S TENSOR REMARK 3 S11: -0.9838 S12: -0.3220 S13: -3.6018 REMARK 3 S21: -0.8081 S22: -0.0705 S23: -1.4133 REMARK 3 S31: 2.6042 S32: -0.7976 S33: 1.0971 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7326 16.8474 30.0784 REMARK 3 T TENSOR REMARK 3 T11: 0.2716 T22: 0.3737 REMARK 3 T33: 0.2965 T12: 0.0304 REMARK 3 T13: 0.0646 T23: 0.0309 REMARK 3 L TENSOR REMARK 3 L11: 8.8735 L22: 0.6418 REMARK 3 L33: 3.4051 L12: -1.0027 REMARK 3 L13: 5.0481 L23: 0.0201 REMARK 3 S TENSOR REMARK 3 S11: 0.0321 S12: 0.6100 S13: -0.1861 REMARK 3 S21: -0.1432 S22: -0.0871 S23: -0.0709 REMARK 3 S31: -0.1189 S32: 0.2423 S33: 0.0087 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 126 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7575 4.6645 45.3751 REMARK 3 T TENSOR REMARK 3 T11: 0.2941 T22: 0.2778 REMARK 3 T33: 0.2362 T12: 0.0704 REMARK 3 T13: -0.0252 T23: 0.0391 REMARK 3 L TENSOR REMARK 3 L11: 4.3313 L22: 3.9290 REMARK 3 L33: 3.3594 L12: 0.4237 REMARK 3 L13: -1.6132 L23: -0.0803 REMARK 3 S TENSOR REMARK 3 S11: -0.1898 S12: 0.4384 S13: -0.3376 REMARK 3 S21: 0.1828 S22: 0.1197 S23: 0.0140 REMARK 3 S31: 0.1643 S32: -0.1453 S33: 0.1337 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0022 5.3632 34.9261 REMARK 3 T TENSOR REMARK 3 T11: 0.7107 T22: 0.8194 REMARK 3 T33: 0.7625 T12: 0.2464 REMARK 3 T13: 0.1637 T23: -0.0452 REMARK 3 L TENSOR REMARK 3 L11: 8.4952 L22: 2.7676 REMARK 3 L33: 8.6709 L12: -4.0329 REMARK 3 L13: -1.0600 L23: 3.1951 REMARK 3 S TENSOR REMARK 3 S11: 1.2422 S12: 3.2072 S13: -1.3113 REMARK 3 S21: -2.2543 S22: -1.9407 S23: -1.5021 REMARK 3 S31: 0.5228 S32: -0.0541 S33: 0.4276 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 17 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4157 15.4885 57.6169 REMARK 3 T TENSOR REMARK 3 T11: 0.3932 T22: 0.3459 REMARK 3 T33: 0.3265 T12: 0.0690 REMARK 3 T13: 0.0466 T23: 0.0572 REMARK 3 L TENSOR REMARK 3 L11: 1.0842 L22: 3.1578 REMARK 3 L33: 9.4585 L12: -0.5610 REMARK 3 L13: -1.9159 L23: 3.8810 REMARK 3 S TENSOR REMARK 3 S11: 0.0391 S12: 0.0659 S13: -0.0131 REMARK 3 S21: 0.2211 S22: -0.3343 S23: 0.3129 REMARK 3 S31: -0.1510 S32: -0.6974 S33: 0.3116 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 55 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6079 27.2572 60.4885 REMARK 3 T TENSOR REMARK 3 T11: 0.8839 T22: 0.4820 REMARK 3 T33: 0.6493 T12: -0.0877 REMARK 3 T13: 0.1391 T23: 0.0429 REMARK 3 L TENSOR REMARK 3 L11: 2.8764 L22: 8.8145 REMARK 3 L33: 2.5635 L12: -0.4588 REMARK 3 L13: -0.8160 L23: 0.4177 REMARK 3 S TENSOR REMARK 3 S11: 0.7667 S12: 0.7245 S13: 0.5288 REMARK 3 S21: -0.8313 S22: -0.7543 S23: -1.2609 REMARK 3 S31: -1.0072 S32: 1.1860 S33: 0.1240 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 71 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.0202 31.4848 64.8169 REMARK 3 T TENSOR REMARK 3 T11: 0.9766 T22: 0.5408 REMARK 3 T33: 0.6481 T12: 0.0942 REMARK 3 T13: 0.0362 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 4.8332 L22: 2.3318 REMARK 3 L33: 4.8600 L12: 1.7704 REMARK 3 L13: -4.8525 L23: -1.8565 REMARK 3 S TENSOR REMARK 3 S11: 0.5806 S12: 0.3888 S13: 1.2617 REMARK 3 S21: -0.0130 S22: -0.3779 S23: 0.1713 REMARK 3 S31: -1.3333 S32: -0.6510 S33: -0.5704 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 84 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.3852 28.2852 74.5158 REMARK 3 T TENSOR REMARK 3 T11: 0.9150 T22: 0.5791 REMARK 3 T33: 0.7762 T12: -0.1155 REMARK 3 T13: 0.0493 T23: -0.1106 REMARK 3 L TENSOR REMARK 3 L11: 4.2722 L22: 8.7723 REMARK 3 L33: 8.3647 L12: 0.7330 REMARK 3 L13: 2.2278 L23: 0.3239 REMARK 3 S TENSOR REMARK 3 S11: -0.0048 S12: -1.7185 S13: 2.5513 REMARK 3 S21: 0.1215 S22: -0.4639 S23: -0.7652 REMARK 3 S31: -1.0909 S32: 0.6596 S33: 0.4376 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2443 10.1374 67.0480 REMARK 3 T TENSOR REMARK 3 T11: 0.5263 T22: 0.4938 REMARK 3 T33: 0.3661 T12: 0.0655 REMARK 3 T13: 0.0712 T23: 0.0912 REMARK 3 L TENSOR REMARK 3 L11: 1.7483 L22: 6.3464 REMARK 3 L33: 4.0309 L12: 0.7602 REMARK 3 L13: 0.4867 L23: 5.0863 REMARK 3 S TENSOR REMARK 3 S11: 0.2286 S12: -0.4091 S13: -0.2219 REMARK 3 S21: 0.9308 S22: -0.4868 S23: 0.1443 REMARK 3 S31: 0.6679 S32: -0.4646 S33: 0.2847 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 126 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.4917 10.0342 52.4174 REMARK 3 T TENSOR REMARK 3 T11: 0.3327 T22: 0.3336 REMARK 3 T33: 0.2816 T12: 0.0692 REMARK 3 T13: 0.0273 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 4.1897 L22: 3.2478 REMARK 3 L33: 4.6606 L12: 2.9180 REMARK 3 L13: -2.7570 L23: -3.7485 REMARK 3 S TENSOR REMARK 3 S11: 0.2205 S12: 0.0074 S13: 0.1449 REMARK 3 S21: 0.7632 S22: -0.1280 S23: 0.1410 REMARK 3 S31: -0.2593 S32: 0.3329 S33: -0.1109 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4RGX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000087332. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97935 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20059 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09800 REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.63800 REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, SHELXCD, MLPHARE, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4 M SODIUM MALONATE PH 7.0, 0.1 M REMARK 280 BIS-TRIS PROPANE PH 7.0, 5 MM 3,4-DIHYDROXY BEZOIC ACID, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 31.79200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.55250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.79200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.55250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: TO GENERATE TETRAMER APPLY X,Y,Z AND -X+1,-Y,Z TO THE REMARK 300 ASYMMETRIC UNIT OF DIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -89.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 63.58400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 355 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 LEU A 2 REMARK 465 ARG A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 VAL A 7 REMARK 465 ASP A 8 REMARK 465 ARG A 9 REMARK 465 LYS A 10 REMARK 465 THR A 150 REMARK 465 PHE A 151 REMARK 465 SER A 152 REMARK 465 SER A 153 REMARK 465 LEU A 154 REMARK 465 ASP A 155 REMARK 465 GLN A 156 REMARK 465 SER A 157 REMARK 465 LYS A 158 REMARK 465 GLU A 159 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 LEU B 2 REMARK 465 ARG B 3 REMARK 465 SER B 4 REMARK 465 SER B 5 REMARK 465 SER B 6 REMARK 465 VAL B 7 REMARK 465 ASP B 8 REMARK 465 ARG B 9 REMARK 465 LYS B 10 REMARK 465 ALA B 90 REMARK 465 PRO B 91 REMARK 465 ASP B 92 REMARK 465 PRO B 93 REMARK 465 THR B 94 REMARK 465 HIS B 95 REMARK 465 GLY B 96 REMARK 465 ARG B 97 REMARK 465 SER B 153 REMARK 465 LEU B 154 REMARK 465 ASP B 155 REMARK 465 GLN B 156 REMARK 465 SER B 157 REMARK 465 LYS B 158 REMARK 465 GLU B 159 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 55 84.74 -150.53 REMARK 500 ASN B 57 72.90 -102.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DHB A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DHB A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3K0L RELATED DB: PDB REMARK 900 THE SAME PROTEIN, APO FORM REMARK 900 RELATED ID: 4RGR RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH COUMARIC ACID REMARK 900 RELATED ID: 4RGS RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH VANILLIN REMARK 900 RELATED ID: 4RGU RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH FERULIC ACID REMARK 900 RELATED ID: MCSG-APC105592 RELATED DB: TARGETTRACK DBREF 4RGX A 1 159 UNP Q7X0D9 Q7X0D9_ACIAD 1 159 DBREF 4RGX B 1 159 UNP Q7X0D9 Q7X0D9_ACIAD 1 159 SEQADV 4RGX SER A -2 UNP Q7X0D9 EXPRESSION TAG SEQADV 4RGX ASN A -1 UNP Q7X0D9 EXPRESSION TAG SEQADV 4RGX ALA A 0 UNP Q7X0D9 EXPRESSION TAG SEQADV 4RGX SER B -2 UNP Q7X0D9 EXPRESSION TAG SEQADV 4RGX ASN B -1 UNP Q7X0D9 EXPRESSION TAG SEQADV 4RGX ALA B 0 UNP Q7X0D9 EXPRESSION TAG SEQRES 1 A 162 SER ASN ALA MSE LEU ARG SER SER SER VAL ASP ARG LYS SEQRES 2 A 162 ARG GLU GLU GLU PRO ARG LEU SER TYR MSE ILE ALA ARG SEQRES 3 A 162 VAL ASP ARG ILE ILE SER LYS TYR LEU THR GLU HIS LEU SEQRES 4 A 162 SER ALA LEU GLU ILE SER LEU PRO GLN PHE THR ALA LEU SEQRES 5 A 162 SER VAL LEU ALA ALA LYS PRO ASN LEU SER ASN ALA LYS SEQRES 6 A 162 LEU ALA GLU ARG SER PHE ILE LYS PRO GLN SER ALA ASN SEQRES 7 A 162 LYS ILE LEU GLN ASP LEU LEU ALA ASN GLY TRP ILE GLU SEQRES 8 A 162 LYS ALA PRO ASP PRO THR HIS GLY ARG ARG ILE LEU VAL SEQRES 9 A 162 THR VAL THR PRO SER GLY LEU ASP LYS LEU ASN GLN CYS SEQRES 10 A 162 ASN GLN VAL VAL GLN GLN LEU GLU ALA GLN MSE LEU GLN SEQRES 11 A 162 GLY VAL ASP ILE ASN LEU ALA PHE LEU ILE ARG ASN ASN SEQRES 12 A 162 LEU GLU LEU MSE VAL LYS ASN LEU SER THR PHE SER SER SEQRES 13 A 162 LEU ASP GLN SER LYS GLU SEQRES 1 B 162 SER ASN ALA MSE LEU ARG SER SER SER VAL ASP ARG LYS SEQRES 2 B 162 ARG GLU GLU GLU PRO ARG LEU SER TYR MSE ILE ALA ARG SEQRES 3 B 162 VAL ASP ARG ILE ILE SER LYS TYR LEU THR GLU HIS LEU SEQRES 4 B 162 SER ALA LEU GLU ILE SER LEU PRO GLN PHE THR ALA LEU SEQRES 5 B 162 SER VAL LEU ALA ALA LYS PRO ASN LEU SER ASN ALA LYS SEQRES 6 B 162 LEU ALA GLU ARG SER PHE ILE LYS PRO GLN SER ALA ASN SEQRES 7 B 162 LYS ILE LEU GLN ASP LEU LEU ALA ASN GLY TRP ILE GLU SEQRES 8 B 162 LYS ALA PRO ASP PRO THR HIS GLY ARG ARG ILE LEU VAL SEQRES 9 B 162 THR VAL THR PRO SER GLY LEU ASP LYS LEU ASN GLN CYS SEQRES 10 B 162 ASN GLN VAL VAL GLN GLN LEU GLU ALA GLN MSE LEU GLN SEQRES 11 B 162 GLY VAL ASP ILE ASN LEU ALA PHE LEU ILE ARG ASN ASN SEQRES 12 B 162 LEU GLU LEU MSE VAL LYS ASN LEU SER THR PHE SER SER SEQRES 13 B 162 LEU ASP GLN SER LYS GLU MODRES 4RGX MSE A 20 MET SELENOMETHIONINE MODRES 4RGX MSE A 125 MET SELENOMETHIONINE MODRES 4RGX MSE A 144 MET SELENOMETHIONINE MODRES 4RGX MSE B 20 MET SELENOMETHIONINE MODRES 4RGX MSE B 125 MET SELENOMETHIONINE MODRES 4RGX MSE B 144 MET SELENOMETHIONINE HET MSE A 20 8 HET MSE A 125 8 HET MSE A 144 8 HET MSE B 20 8 HET MSE B 125 8 HET MSE B 144 8 HET DHB A 201 11 HET EDO A 202 4 HET CL A 203 1 HET DHB A 204 11 HET EDO B 201 4 HET CL B 202 1 HETNAM MSE SELENOMETHIONINE HETNAM DHB 3,4-DIHYDROXYBENZOIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 DHB 2(C7 H6 O4) FORMUL 4 EDO 2(C2 H6 O2) FORMUL 5 CL 2(CL 1-) FORMUL 9 HOH *182(H2 O) HELIX 1 1 ARG A 16 ALA A 38 1 23 HELIX 2 2 SER A 42 LYS A 55 1 14 HELIX 3 3 SER A 59 PHE A 68 1 10 HELIX 4 4 LYS A 70 GLN A 72 5 3 HELIX 5 5 SER A 73 ASN A 84 1 12 HELIX 6 6 THR A 104 LEU A 126 1 23 HELIX 7 7 ASP A 130 SER A 149 1 20 HELIX 8 8 ARG B 16 ALA B 38 1 23 HELIX 9 9 SER B 42 LYS B 55 1 14 HELIX 10 10 SER B 59 PHE B 68 1 10 HELIX 11 11 LYS B 70 GLN B 72 5 3 HELIX 12 12 SER B 73 ASN B 84 1 12 HELIX 13 13 THR B 104 LEU B 126 1 23 HELIX 14 14 ASP B 130 LEU B 148 1 19 HELIX 15 15 SER B 149 SER B 152 5 4 SHEET 1 A 2 ILE A 87 PRO A 91 0 SHEET 2 A 2 ILE A 99 VAL A 103 -1 O THR A 102 N GLU A 88 SHEET 1 B 2 ILE B 87 GLU B 88 0 SHEET 2 B 2 THR B 102 VAL B 103 -1 O THR B 102 N GLU B 88 LINK C TYR A 19 N MSE A 20 1555 1555 1.33 LINK C MSE A 20 N ILE A 21 1555 1555 1.33 LINK C GLN A 124 N MSE A 125 1555 1555 1.33 LINK C MSE A 125 N LEU A 126 1555 1555 1.33 LINK C ALEU A 143 N MSE A 144 1555 1555 1.33 LINK C BLEU A 143 N MSE A 144 1555 1555 1.33 LINK C MSE A 144 N VAL A 145 1555 1555 1.33 LINK C TYR B 19 N MSE B 20 1555 1555 1.33 LINK C MSE B 20 N ILE B 21 1555 1555 1.33 LINK C GLN B 124 N MSE B 125 1555 1555 1.33 LINK C MSE B 125 N LEU B 126 1555 1555 1.33 LINK C ALEU B 143 N MSE B 144 1555 1555 1.33 LINK C BLEU B 143 N MSE B 144 1555 1555 1.33 LINK C MSE B 144 N VAL B 145 1555 1555 1.33 CISPEP 1 GLU A 14 PRO A 15 0 -5.49 CISPEP 2 GLU B 14 PRO B 15 0 -2.66 SITE 1 AC1 10 ASP A 25 SER A 29 LEU A 43 THR A 47 SITE 2 AC1 10 HOH A 302 HOH A 407 HOH A 409 SER B 18 SITE 3 AC1 10 ALA B 22 ARG B 26 SITE 1 AC2 5 GLU A 122 ALA A 134 PHE A 135 ARG B 16 SITE 2 AC2 5 LEU B 17 SITE 1 AC3 4 ASN A 132 ARG A 138 ASN A 139 ARG B 11 SITE 1 AC4 12 TYR A 19 ALA A 22 ARG A 26 HOH A 404 SITE 2 AC4 12 HOH A 406 ASP B 25 SER B 29 LEU B 43 SITE 3 AC4 12 THR B 47 PHE B 68 HOH B 306 HOH B 307 SITE 1 AC5 5 ARG A 16 LEU A 17 GLU B 122 ALA B 134 SITE 2 AC5 5 PHE B 135 SITE 1 AC6 3 ASN B 132 ARG B 138 ASN B 139 CRYST1 63.584 83.105 63.049 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015727 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012033 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015861 0.00000 MASTER 550 0 12 15 4 0 12 6 0 0 0 26 END