HEADER TRANSFERASE/TRANSFERASE INHIBITOR 26-JUN-14 4QQ5 TITLE CRYSTAL STRUCTURE OF FGF RECEPTOR (FGFR) 4 KINASE HARBORING THE V550L TITLE 2 GATE-KEEPER MUTATION IN COMPLEX WITH FIIN-2, AN IRREVERSIBLE TYROSINE TITLE 3 KINASE INHIBITOR CAPABLE OF OVERCOMING FGFR KINASE GATE-KEEPER TITLE 4 MUTATIONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBROBLAST GROWTH FACTOR RECEPTOR 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN OF FGF RECEPTOR 4; COMPND 5 SYNONYM: FGFR-4; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FGFR4, JTK2, TKF; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE DOMAIN FOLD, CELL SIGNALING, PHOSPHOTRANSFERASE, KEYWDS 2 PLASMAMEMBRANE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Z.HUANG,M.MOHAMMADI REVDAT 2 28-JAN-15 4QQ5 1 JRNL REVDAT 1 29-OCT-14 4QQ5 0 JRNL AUTH Z.HUANG,L.TAN,H.WANG,Y.LIU,S.BLAIS,J.DENG,T.A.NEUBERT, JRNL AUTH 2 N.S.GRAY,X.LI,M.MOHAMMADI JRNL TITL DFG-OUT MODE OF INHIBITION BY AN IRREVERSIBLE TYPE-1 JRNL TITL 2 INHIBITOR CAPABLE OF OVERCOMING GATE-KEEPER MUTATIONS IN FGF JRNL TITL 3 RECEPTORS. JRNL REF ACS CHEM.BIOL. V. 10 299 2015 JRNL REFN ISSN 1554-8929 JRNL PMID 25317566 JRNL DOI 10.1021/CB500674S REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 18134 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1812 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.3775 - 5.1749 1.00 1259 141 0.1761 0.2071 REMARK 3 2 5.1749 - 4.1090 1.00 1257 143 0.1555 0.1858 REMARK 3 3 4.1090 - 3.5901 1.00 1263 139 0.1671 0.2035 REMARK 3 4 3.5901 - 3.2620 1.00 1277 139 0.1943 0.2315 REMARK 3 5 3.2620 - 3.0283 1.00 1266 138 0.2178 0.2761 REMARK 3 6 3.0283 - 2.8498 1.00 1264 142 0.2100 0.2345 REMARK 3 7 2.8498 - 2.7071 1.00 1277 143 0.2257 0.2785 REMARK 3 8 2.7071 - 2.5893 1.00 1236 136 0.2110 0.2699 REMARK 3 9 2.5893 - 2.4897 1.00 1252 139 0.2270 0.3011 REMARK 3 10 2.4897 - 2.4038 1.00 1278 144 0.2164 0.2893 REMARK 3 11 2.4038 - 2.3286 1.00 1269 139 0.2215 0.2638 REMARK 3 12 2.3286 - 2.2621 0.98 1236 140 0.2290 0.2645 REMARK 3 13 2.2621 - 2.2025 0.91 1188 129 0.2090 0.2432 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2241 REMARK 3 ANGLE : 1.229 3044 REMARK 3 CHIRALITY : 0.042 334 REMARK 3 PLANARITY : 0.007 389 REMARK 3 DIHEDRAL : 17.984 836 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: all REMARK 3 ORIGIN FOR THE GROUP (A): -61.4920 142.2560 11.1489 REMARK 3 T TENSOR REMARK 3 T11: 0.1892 T22: 0.1280 REMARK 3 T33: 0.1622 T12: -0.0232 REMARK 3 T13: -0.0017 T23: 0.0121 REMARK 3 L TENSOR REMARK 3 L11: 0.2120 L22: 0.4140 REMARK 3 L33: 0.2598 L12: 0.1099 REMARK 3 L13: 0.0491 L23: 0.3206 REMARK 3 S TENSOR REMARK 3 S11: 0.0271 S12: -0.0244 S13: -0.0147 REMARK 3 S21: -0.0892 S22: 0.0002 S23: -0.0082 REMARK 3 S31: -0.1023 S32: -0.0198 S33: 0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QQ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUL-14. REMARK 100 THE RCSB ID CODE IS RCSB086372. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97947 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18138 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : 0.10200 REMARK 200 FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2PSQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, 1.0 TO 1.2 M (NH4)2SO4, REMARK 280 AND 10 MM YTTRIUM (III) CHLORIDE HEXAHYDRATE, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 69.79950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.29876 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 16.55333 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 69.79950 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 40.29876 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 16.55333 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 69.79950 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 40.29876 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 16.55333 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 80.59752 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 33.10667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 80.59752 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 33.10667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 80.59752 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 33.10667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 241.79256 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -209.39850 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 120.89628 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 436 REMARK 465 GLY A 437 REMARK 465 SER A 438 REMARK 465 SER A 439 REMARK 465 HIS A 440 REMARK 465 HIS A 441 REMARK 465 HIS A 442 REMARK 465 HIS A 443 REMARK 465 HIS A 444 REMARK 465 HIS A 445 REMARK 465 SER A 446 REMARK 465 ASP A 495 REMARK 465 PRO A 496 REMARK 465 ALA A 497 REMARK 465 ARG A 498 REMARK 465 PRO A 499 REMARK 465 GLY A 574 REMARK 465 PRO A 575 REMARK 465 ASP A 576 REMARK 465 LEU A 577 REMARK 465 SER A 578 REMARK 465 PRO A 579 REMARK 465 ASP A 580 REMARK 465 GLY A 581 REMARK 465 PRO A 582 REMARK 465 ARG A 583 REMARK 465 SER A 584 REMARK 465 SER A 585 REMARK 465 GLU A 586 REMARK 465 ARG A 640 REMARK 465 GLY A 641 REMARK 465 VAL A 642 REMARK 465 HIS A 643 REMARK 465 HIS A 644 REMARK 465 ILE A 645 REMARK 465 ASP A 646 REMARK 465 TYR A 647 REMARK 465 TYR A 648 REMARK 465 LYS A 649 REMARK 465 LYS A 650 REMARK 465 THR A 651 REMARK 465 SER A 652 REMARK 465 ASN A 653 REMARK 465 GLY A 654 REMARK 465 ARG A 655 REMARK 465 SER A 756 REMARK 465 GLU A 757 REMARK 465 GLU A 758 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 447 CG CD OE1 NE2 REMARK 470 ASP A 500 CG OD1 OD2 REMARK 470 LYS A 511 CG CD CE NZ REMARK 470 ARG A 708 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 550 C - N - CA ANGL. DEV. = 11.1 DEGREES REMARK 500 PRO A 657 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 448 -89.41 -145.19 REMARK 500 PRO A 477 153.51 -49.73 REMARK 500 LEU A 589 61.15 -107.32 REMARK 500 ARG A 616 -11.73 82.96 REMARK 500 ASP A 617 42.66 -143.51 REMARK 500 PRO A 657 -19.48 -47.81 REMARK 500 PHE A 704 -92.25 -6.46 REMARK 500 CYS A 719 114.90 -165.12 REMARK 500 ALA A 754 26.10 -68.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 703 PHE A 704 144.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 37O A 801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4QQC RELATED DB: PDB REMARK 900 RELATED ID: 4QQJ RELATED DB: PDB REMARK 900 RELATED ID: 4QQT RELATED DB: PDB REMARK 900 RELATED ID: 4QRC RELATED DB: PDB DBREF 4QQ5 A 450 758 UNP P22455 FGFR4_HUMAN 445 753 SEQADV 4QQ5 MET A 436 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 GLY A 437 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 SER A 438 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 SER A 439 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 HIS A 440 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 HIS A 441 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 HIS A 442 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 HIS A 443 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 HIS A 444 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 HIS A 445 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 SER A 446 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 GLN A 447 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 ASP A 448 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 PRO A 449 UNP P22455 EXPRESSION TAG SEQADV 4QQ5 LEU A 555 UNP P22455 VAL 550 ENGINEERED MUTATION SEQADV 4QQ5 GLU A 669 UNP P22455 ARG 664 ENGINEERED MUTATION SEQRES 1 A 323 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 323 PRO LEU LEU ALA GLY LEU VAL SER LEU ASP LEU PRO LEU SEQRES 3 A 323 ASP PRO LEU TRP GLU PHE PRO ARG ASP ARG LEU VAL LEU SEQRES 4 A 323 GLY LYS PRO LEU GLY GLU GLY CYS PHE GLY GLN VAL VAL SEQRES 5 A 323 ARG ALA GLU ALA PHE GLY MET ASP PRO ALA ARG PRO ASP SEQRES 6 A 323 GLN ALA SER THR VAL ALA VAL LYS MET LEU LYS ASP ASN SEQRES 7 A 323 ALA SER ASP LYS ASP LEU ALA ASP LEU VAL SER GLU MET SEQRES 8 A 323 GLU VAL MET LYS LEU ILE GLY ARG HIS LYS ASN ILE ILE SEQRES 9 A 323 ASN LEU LEU GLY VAL CYS THR GLN GLU GLY PRO LEU TYR SEQRES 10 A 323 VAL ILE LEU GLU CYS ALA ALA LYS GLY ASN LEU ARG GLU SEQRES 11 A 323 PHE LEU ARG ALA ARG ARG PRO PRO GLY PRO ASP LEU SER SEQRES 12 A 323 PRO ASP GLY PRO ARG SER SER GLU GLY PRO LEU SER PHE SEQRES 13 A 323 PRO VAL LEU VAL SER CYS ALA TYR GLN VAL ALA ARG GLY SEQRES 14 A 323 MET GLN TYR LEU GLU SER ARG LYS CYS ILE HIS ARG ASP SEQRES 15 A 323 LEU ALA ALA ARG ASN VAL LEU VAL THR GLU ASP ASN VAL SEQRES 16 A 323 MET LYS ILE ALA ASP PHE GLY LEU ALA ARG GLY VAL HIS SEQRES 17 A 323 HIS ILE ASP TYR TYR LYS LYS THR SER ASN GLY ARG LEU SEQRES 18 A 323 PRO VAL LYS TRP MET ALA PRO GLU ALA LEU PHE ASP GLU SEQRES 19 A 323 VAL TYR THR HIS GLN SER ASP VAL TRP SER PHE GLY ILE SEQRES 20 A 323 LEU LEU TRP GLU ILE PHE THR LEU GLY GLY SER PRO TYR SEQRES 21 A 323 PRO GLY ILE PRO VAL GLU GLU LEU PHE SER LEU LEU ARG SEQRES 22 A 323 GLU GLY HIS ARG MET ASP ARG PRO PRO HIS CYS PRO PRO SEQRES 23 A 323 GLU LEU TYR GLY LEU MET ARG GLU CYS TRP HIS ALA ALA SEQRES 24 A 323 PRO SER GLN ARG PRO THR PHE LYS GLN LEU VAL GLU ALA SEQRES 25 A 323 LEU ASP LYS VAL LEU LEU ALA VAL SER GLU GLU HET 37O A 801 47 HETNAM 37O N-(4-{[3-(3,5-DIMETHOXYPHENYL)-7-{[4-(4- HETNAM 2 37O METHYLPIPERAZIN-1-YL)PHENYL]AMINO}-2-OXO-3,4- HETNAM 3 37O DIHYDROPYRIMIDO[4,5-D]PYRIMIDIN-1(2H)- HETNAM 4 37O YL]METHYL}PHENYL)PROPANAMIDE FORMUL 2 37O C35 H40 N8 O4 HELIX 1 1 ASP A 448 LEU A 454 1 7 HELIX 2 2 PRO A 468 ASP A 470 5 3 HELIX 3 3 SER A 515 GLY A 533 1 19 HELIX 4 4 ASN A 562 ARG A 570 1 9 HELIX 5 5 SER A 590 ARG A 611 1 22 HELIX 6 6 ALA A 619 ARG A 621 5 3 HELIX 7 7 LEU A 656 MET A 661 5 6 HELIX 8 8 ALA A 662 GLU A 669 1 8 HELIX 9 9 THR A 672 THR A 689 1 18 HELIX 10 10 PRO A 699 GLU A 709 1 11 HELIX 11 11 PRO A 720 TRP A 731 1 12 HELIX 12 12 ALA A 734 ARG A 738 5 5 HELIX 13 13 THR A 740 ALA A 754 1 15 SHEET 1 A 5 LEU A 472 PRO A 477 0 SHEET 2 A 5 GLN A 485 PHE A 492 -1 O ARG A 488 N LYS A 476 SHEET 3 A 5 ALA A 502 MET A 509 -1 O VAL A 507 N VAL A 487 SHEET 4 A 5 TYR A 552 GLU A 556 -1 O LEU A 555 N ALA A 506 SHEET 5 A 5 LEU A 541 CYS A 545 -1 N LEU A 542 O ILE A 554 SHEET 1 B 2 VAL A 623 VAL A 625 0 SHEET 2 B 2 MET A 631 ILE A 633 -1 O LYS A 632 N LEU A 624 LINK SG CYS A 482 C46 37O A 801 1555 1555 1.75 CISPEP 1 GLN A 447 ASP A 448 0 4.43 SITE 1 AC1 16 LEU A 478 GLU A 480 GLY A 481 CYS A 482 SITE 2 AC1 16 PHE A 483 LYS A 508 GLU A 525 LEU A 555 SITE 3 AC1 16 GLU A 556 ALA A 558 ALA A 559 GLY A 561 SITE 4 AC1 16 LEU A 624 ALA A 634 ASP A 635 PHE A 636 CRYST1 139.599 139.599 49.660 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007163 0.004136 0.000000 0.00000 SCALE2 0.000000 0.008272 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020137 0.00000 MASTER 387 0 1 13 7 0 4 6 0 0 0 25 END