HEADER TRANSFERASE 29-APR-14 4Q95 TITLE CRYSTAL STRUCTURE OF HRASLS3/LRAT CHIMERIC PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HRAS-LIKE SUPPRESSOR 3, LECITHIN RETINOL ACYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HRSL3, ADIPOSE-SPECIFIC PHOSPHOLIPASE A2, ADPLA, GROUP XVI COMPND 5 PHOSPHOLIPASE A1/A2, H-REV 107 PROTEIN HOMOLOG, HRAS-LIKE SUPPRESSOR COMPND 6 1, HREV107-1, HREV107-3, RENAL CARCINOMA ANTIGEN NY-REN-65, COMPND 7 PHOSPHATIDYLCHOLINE--RETINOL O-ACYLTRANSFERASE, PHOSPHATIDYLCHOLINE- COMPND 8 RETINOL-O-ACYLTRANSFERASE; COMPND 9 EC: 2.3.1.135; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HUMAN, MOUSE; SOURCE 4 ORGANISM_TAXID: 9606, 10090; SOURCE 5 GENE: HRASLS3, HREV107, HUMAN PLA2G16 AND MOUSE LRAT, LRAT, PLA2G16; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-2T KEYWDS LECITHIN:RETINOL ACYLTRANSFERASE, ALPHA/BETA FOLD, ACYLATION, KEYWDS 2 MEMBRANE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.GOLCZAK,P.D.KISER,A.E.SEARS,K.PALCZEWSKI REVDAT 3 16-AUG-17 4Q95 1 SOURCE REMARK REVDAT 2 25-FEB-15 4Q95 1 JRNL REVDAT 1 29-OCT-14 4Q95 0 JRNL AUTH M.GOLCZAK,A.E.SEARS,P.D.KISER,K.PALCZEWSKI JRNL TITL LRAT-SPECIFIC DOMAIN FACILITATES VITAMIN A METABOLISM BY JRNL TITL 2 DOMAIN SWAPPING IN HRASLS3. JRNL REF NAT.CHEM.BIOL. V. 11 26 2015 JRNL REFN ISSN 1552-4450 JRNL PMID 25383759 JRNL DOI 10.1038/NCHEMBIO.1687 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 16774 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 840 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2167 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 60 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.27000 REMARK 3 B22 (A**2) : 0.27000 REMARK 3 B33 (A**2) : -0.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.264 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.209 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.195 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.840 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2228 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2184 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3011 ; 1.676 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5037 ; 1.111 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 265 ; 7.144 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 105 ;30.695 ;24.381 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 394 ;15.919 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;17.145 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 335 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2460 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 485 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1069 ; 2.977 ; 3.771 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1070 ; 2.976 ; 3.774 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1331 ; 4.366 ; 5.636 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1332 ; 4.367 ; 5.639 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1159 ; 3.705 ; 4.191 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1160 ; 3.705 ; 4.193 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1681 ; 5.528 ; 6.119 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2389 ; 8.162 ;30.270 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2390 ; 8.163 ;30.281 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 7 140 B 7 140 6511 0.18 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 134 REMARK 3 ORIGIN FOR THE GROUP (A): 8.0804 26.0039 8.2445 REMARK 3 T TENSOR REMARK 3 T11: 0.2230 T22: 0.3243 REMARK 3 T33: 0.1867 T12: -0.0750 REMARK 3 T13: -0.0328 T23: 0.0468 REMARK 3 L TENSOR REMARK 3 L11: 0.7896 L22: 1.8295 REMARK 3 L33: 2.1357 L12: -0.7340 REMARK 3 L13: 0.3874 L23: -1.6855 REMARK 3 S TENSOR REMARK 3 S11: -0.0471 S12: 0.1127 S13: 0.3545 REMARK 3 S21: 0.1160 S22: -0.2895 S23: -0.4147 REMARK 3 S31: -0.1341 S32: 0.4559 S33: 0.3365 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 135 A 147 REMARK 3 ORIGIN FOR THE GROUP (A): 2.7044 16.5049 20.1701 REMARK 3 T TENSOR REMARK 3 T11: 0.4556 T22: 0.3349 REMARK 3 T33: 0.2283 T12: -0.0147 REMARK 3 T13: 0.0230 T23: 0.0553 REMARK 3 L TENSOR REMARK 3 L11: 1.0870 L22: 0.0520 REMARK 3 L33: 8.0722 L12: 0.2139 REMARK 3 L13: -2.9280 L23: -0.6107 REMARK 3 S TENSOR REMARK 3 S11: 0.0272 S12: -0.0277 S13: -0.0079 REMARK 3 S21: 0.0424 S22: 0.0331 S23: 0.0289 REMARK 3 S31: -0.0929 S32: -0.1680 S33: -0.0603 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 31 REMARK 3 ORIGIN FOR THE GROUP (A): 10.2037 -4.0200 27.0504 REMARK 3 T TENSOR REMARK 3 T11: 0.1449 T22: 0.0628 REMARK 3 T33: 0.0433 T12: 0.0237 REMARK 3 T13: -0.0484 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 9.5091 L22: 2.8384 REMARK 3 L33: 4.4360 L12: 0.4398 REMARK 3 L13: -2.3973 L23: -1.1397 REMARK 3 S TENSOR REMARK 3 S11: 0.0343 S12: -0.1155 S13: -0.4060 REMARK 3 S21: 0.1405 S22: 0.1434 S23: -0.0582 REMARK 3 S31: 0.4609 S32: 0.0619 S33: -0.1777 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 32 B 140 REMARK 3 ORIGIN FOR THE GROUP (A): 0.8746 8.8732 14.5379 REMARK 3 T TENSOR REMARK 3 T11: 0.1867 T22: 0.2821 REMARK 3 T33: 0.0989 T12: -0.0285 REMARK 3 T13: -0.0272 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 0.5424 L22: 3.4871 REMARK 3 L33: 1.8377 L12: -0.5801 REMARK 3 L13: 0.7850 L23: -2.0793 REMARK 3 S TENSOR REMARK 3 S11: 0.1623 S12: 0.1014 S13: -0.1178 REMARK 3 S21: -0.4340 S22: 0.1021 S23: 0.4615 REMARK 3 S31: 0.3606 S32: -0.1141 S33: -0.2644 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.10 REMARK 3 ION PROBE RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4Q95 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000085760. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16797 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 49.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4DOT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS/HCL, PH 8.5, 0.2 M NACL, REMARK 280 20% (W/V) POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.98250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.56150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.56150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 118.47375 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.56150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.56150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.49125 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.56150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.56150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 118.47375 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.56150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.56150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.49125 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 78.98250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 CYS A 0 REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 ARG A 3 REMARK 465 ALA A 4 REMARK 465 PRO A 5 REMARK 465 ILE A 6 REMARK 465 GLY B -1 REMARK 465 CYS B 0 REMARK 465 GLY B 1 REMARK 465 SER B 2 REMARK 465 ARG B 3 REMARK 465 ALA B 4 REMARK 465 ARG B 51 REMARK 465 THR B 52 REMARK 465 GLN B 53 REMARK 465 LYS B 54 REMARK 465 VAL B 55 REMARK 465 VAL B 56 REMARK 465 SER B 57 REMARK 465 ASN B 58 REMARK 465 LYS B 59 REMARK 465 GLN B 141 REMARK 465 GLU B 142 REMARK 465 PHE B 143 REMARK 465 ILE B 144 REMARK 465 VAL B 145 REMARK 465 THR B 146 REMARK 465 ASP B 147 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 40 84.85 -154.74 REMARK 500 LYS A 54 34.82 -144.27 REMARK 500 ASP B 40 88.12 -155.54 REMARK 500 ASN B 89 84.23 -154.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SHV A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SHV B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4DOT RELATED DB: PDB DBREF 4Q95 A 3 39 UNP P53816 HRSL3_HUMAN 2 38 DBREF 4Q95 A 40 70 UNP Q9JI60 LRAT_MOUSE 76 106 DBREF 4Q95 A 71 141 UNP P53816 HRSL3_HUMAN 59 129 DBREF 4Q95 B 3 39 UNP P53816 HRSL3_HUMAN 2 38 DBREF 4Q95 B 40 70 UNP Q9JI60 LRAT_MOUSE 76 106 DBREF 4Q95 B 71 141 UNP P53816 HRSL3_HUMAN 59 129 SEQADV 4Q95 GLY A -1 UNP P53816 EXPRESSION TAG SEQADV 4Q95 CYS A 0 UNP P53816 EXPRESSION TAG SEQADV 4Q95 GLY A 1 UNP P53816 EXPRESSION TAG SEQADV 4Q95 SER A 2 UNP P53816 EXPRESSION TAG SEQADV 4Q95 GLU A 142 UNP P53816 EXPRESSION TAG SEQADV 4Q95 PHE A 143 UNP P53816 EXPRESSION TAG SEQADV 4Q95 ILE A 144 UNP P53816 EXPRESSION TAG SEQADV 4Q95 VAL A 145 UNP P53816 EXPRESSION TAG SEQADV 4Q95 THR A 146 UNP P53816 EXPRESSION TAG SEQADV 4Q95 ASP A 147 UNP P53816 EXPRESSION TAG SEQADV 4Q95 GLY B -1 UNP P53816 EXPRESSION TAG SEQADV 4Q95 CYS B 0 UNP P53816 EXPRESSION TAG SEQADV 4Q95 GLY B 1 UNP P53816 EXPRESSION TAG SEQADV 4Q95 SER B 2 UNP P53816 EXPRESSION TAG SEQADV 4Q95 GLU B 142 UNP P53816 EXPRESSION TAG SEQADV 4Q95 PHE B 143 UNP P53816 EXPRESSION TAG SEQADV 4Q95 ILE B 144 UNP P53816 EXPRESSION TAG SEQADV 4Q95 VAL B 145 UNP P53816 EXPRESSION TAG SEQADV 4Q95 THR B 146 UNP P53816 EXPRESSION TAG SEQADV 4Q95 ASP B 147 UNP P53816 EXPRESSION TAG SEQRES 1 A 149 GLY CYS GLY SER ARG ALA PRO ILE PRO GLU PRO LYS PRO SEQRES 2 A 149 GLY ASP LEU ILE GLU ILE PHE ARG PRO PHE TYR ARG HIS SEQRES 3 A 149 TRP ALA ILE TYR VAL GLY ASP GLY TYR VAL VAL HIS LEU SEQRES 4 A 149 ALA PRO ASP ILE LEU LEU ALA LEU THR ASN ASP LYS GLU SEQRES 5 A 149 ARG THR GLN LYS VAL VAL SER ASN LYS ARG LEU LEU LEU SEQRES 6 A 149 GLY VAL ILE CYS LYS VAL ALA ILE VAL LYS LYS GLU LEU SEQRES 7 A 149 LEU TYR ASP VAL ALA GLY SER ASP LYS TYR GLN VAL ASN SEQRES 8 A 149 ASN LYS HIS ASP ASP LYS TYR SER PRO LEU PRO CYS SER SEQRES 9 A 149 LYS ILE ILE GLN ARG ALA GLU GLU LEU VAL GLY GLN GLU SEQRES 10 A 149 VAL LEU TYR LYS LEU THR SER GLU ASN CYS GLU HIS PHE SEQRES 11 A 149 VAL ASN GLU LEU ARG TYR GLY VAL ALA ARG SER ASP GLN SEQRES 12 A 149 GLU PHE ILE VAL THR ASP SEQRES 1 B 149 GLY CYS GLY SER ARG ALA PRO ILE PRO GLU PRO LYS PRO SEQRES 2 B 149 GLY ASP LEU ILE GLU ILE PHE ARG PRO PHE TYR ARG HIS SEQRES 3 B 149 TRP ALA ILE TYR VAL GLY ASP GLY TYR VAL VAL HIS LEU SEQRES 4 B 149 ALA PRO ASP ILE LEU LEU ALA LEU THR ASN ASP LYS GLU SEQRES 5 B 149 ARG THR GLN LYS VAL VAL SER ASN LYS ARG LEU LEU LEU SEQRES 6 B 149 GLY VAL ILE CYS LYS VAL ALA ILE VAL LYS LYS GLU LEU SEQRES 7 B 149 LEU TYR ASP VAL ALA GLY SER ASP LYS TYR GLN VAL ASN SEQRES 8 B 149 ASN LYS HIS ASP ASP LYS TYR SER PRO LEU PRO CYS SER SEQRES 9 B 149 LYS ILE ILE GLN ARG ALA GLU GLU LEU VAL GLY GLN GLU SEQRES 10 B 149 VAL LEU TYR LYS LEU THR SER GLU ASN CYS GLU HIS PHE SEQRES 11 B 149 VAL ASN GLU LEU ARG TYR GLY VAL ALA ARG SER ASP GLN SEQRES 12 B 149 GLU PHE ILE VAL THR ASP HET SHV A 201 8 HET SHV B 201 8 HETNAM SHV HEPTANOIC ACID FORMUL 3 SHV 2(C7 H14 O2) FORMUL 5 HOH *60(H2 O) HELIX 1 1 ARG A 51 VAL A 55 5 5 HELIX 2 2 LEU A 77 GLY A 82 1 6 HELIX 3 3 PRO A 100 VAL A 112 1 13 HELIX 4 4 SER A 122 GLY A 135 1 14 HELIX 5 5 LEU B 77 GLY B 82 1 6 HELIX 6 6 PRO B 100 LEU B 111 1 12 HELIX 7 7 SER B 122 GLY B 135 1 14 SHEET 1 A 7 TYR A 86 VAL A 88 0 SHEET 2 A 7 LEU A 14 PHE A 18 -1 N GLU A 16 O GLN A 87 SHEET 3 A 7 ARG A 23 GLY A 30 -1 O HIS A 24 N ILE A 17 SHEET 4 A 7 TYR A 33 ASN A 47 -1 O TYR A 33 N VAL A 29 SHEET 5 A 7 LEU A 62 LEU A 76 -1 O ILE A 66 N ALA A 44 SHEET 6 A 7 GLU A 115 THR A 121 -1 O VAL A 116 N VAL A 69 SHEET 7 A 7 ILE A 144 VAL A 145 -1 O ILE A 144 N LEU A 117 SHEET 1 B 6 TYR B 86 VAL B 88 0 SHEET 2 B 6 LEU B 14 PHE B 18 -1 N GLU B 16 O GLN B 87 SHEET 3 B 6 ARG B 23 GLY B 30 -1 O HIS B 24 N ILE B 17 SHEET 4 B 6 TYR B 33 ASP B 48 -1 O TYR B 33 N VAL B 29 SHEET 5 B 6 LEU B 62 LEU B 76 -1 O GLU B 75 N VAL B 34 SHEET 6 B 6 GLU B 115 THR B 121 -1 O LEU B 120 N VAL B 65 LINK SG CYS A 125 C1 SHV A 201 1555 1555 1.75 LINK SG CYS B 125 C1 SHV B 201 1555 1555 1.76 SITE 1 AC1 5 LEU A 120 CYS A 125 TYR B 22 HIS B 24 SITE 2 AC1 5 TRP B 25 SITE 1 AC2 7 TYR A 22 HIS A 24 TRP A 25 LEU B 63 SITE 2 AC2 7 VAL B 65 THR B 121 CYS B 125 CRYST1 63.123 63.123 157.965 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015842 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015842 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006331 0.00000 MASTER 414 0 2 7 13 0 4 6 0 0 0 24 END