HEADER FATTY ACID BINDING PROTEIN/HYDROLASE 07-MAY-14 4PHU TITLE CRYSTAL STRUCTURE OF HUMAN GPR40 BOUND TO ALLOSTERIC AGONIST TAK-875 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FREE FATTY ACID RECEPTOR 1,LYSOZYME; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP O14842 RESIDUES 2-213, UNP P00720 RESIDUES 2-161, UNP COMPND 5 O14842 RESIDUES 214-300; COMPND 6 SYNONYM: G-PROTEIN COUPLED RECEPTOR 40,ENDOLYSIN,LYSIS PROTEIN, COMPND 7 MURAMIDASE; COMPND 8 EC: 3.2.1.17; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES; COMPND 11 OTHER_DETAILS: CHIMERA SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, ENTEROBACTERIA PHAGE T4; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606, 10665; SOURCE 5 GENE: FFAR1, GPR40, E; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PFASTBAC1 KEYWDS GPR40, FATTY ACID BINDING PROTEIN, CLASS A, G-PROTEIN COUPLED KEYWDS 2 RECEPTOR, TYPE II DIABETES, TAK-875, FASIGLIFAM, FATTY ACID BINDING KEYWDS 3 PROTEIN-HYDROLASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.SRIVASTAVA,J.K.YANO,Y.HIROZANE,G.KEFALA,G.SNELL,W.LANE,F.GRUSWITZ, AUTHOR 2 A.IVETAC,K.AERTGEERTS,J.NGUYEN,A.JENNINGS,K.OKADA REVDAT 5 22-NOV-17 4PHU 1 SOURCE JRNL REMARK REVDAT 4 01-OCT-14 4PHU 1 JRNL REVDAT 3 06-AUG-14 4PHU 1 JRNL REVDAT 2 23-JUL-14 4PHU 1 JRNL REVDAT 1 16-JUL-14 4PHU 0 JRNL AUTH A.SRIVASTAVA,J.YANO,Y.HIROZANE,G.KEFALA,F.GRUSWITZ,G.SNELL, JRNL AUTH 2 W.LANE,A.IVETAC,K.AERTGEERTS,J.NGUYEN,A.JENNINGS,K.OKADA JRNL TITL HIGH-RESOLUTION STRUCTURE OF THE HUMAN GPR40 RECEPTOR BOUND JRNL TITL 2 TO ALLOSTERIC AGONIST TAK-875. JRNL REF NATURE V. 513 124 2014 JRNL REFN ESSN 1476-4687 JRNL PMID 25043059 JRNL DOI 10.1038/NATURE13494 REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 25947 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1312 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.33 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1493 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.51 REMARK 3 BIN R VALUE (WORKING SET) : 0.2670 REMARK 3 BIN FREE R VALUE SET COUNT : 67 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3272 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 127 REMARK 3 SOLVENT ATOMS : 90 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.17000 REMARK 3 B22 (A**2) : -0.55000 REMARK 3 B33 (A**2) : -1.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.24000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.272 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.210 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.172 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.734 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3495 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3421 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4739 ; 1.118 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7832 ; 0.743 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 438 ; 4.978 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 124 ;35.679 ;22.258 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 511 ;16.263 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;15.969 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 531 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3884 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 808 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1740 ; 1.104 ; 2.538 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1739 ; 1.103 ; 2.537 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2173 ; 1.894 ; 3.798 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 211 REMARK 3 ORIGIN FOR THE GROUP (A): -40.269 0.623 51.538 REMARK 3 T TENSOR REMARK 3 T11: 0.0340 T22: 0.1301 REMARK 3 T33: 0.0191 T12: 0.0036 REMARK 3 T13: 0.0245 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 1.5093 L22: 3.0002 REMARK 3 L33: 2.0220 L12: -0.1434 REMARK 3 L13: -0.0549 L23: 0.2796 REMARK 3 S TENSOR REMARK 3 S11: 0.0252 S12: 0.0435 S13: -0.0150 REMARK 3 S21: 0.0042 S22: -0.0383 S23: 0.0275 REMARK 3 S31: 0.0545 S32: -0.1818 S33: 0.0131 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1002 A 1161 REMARK 3 ORIGIN FOR THE GROUP (A): -10.522 -4.052 7.140 REMARK 3 T TENSOR REMARK 3 T11: 0.1519 T22: 0.4986 REMARK 3 T33: 0.0981 T12: -0.0572 REMARK 3 T13: 0.0846 T23: -0.0455 REMARK 3 L TENSOR REMARK 3 L11: 0.8935 L22: 1.0345 REMARK 3 L33: 8.4949 L12: -0.5072 REMARK 3 L13: 1.6192 L23: -0.4588 REMARK 3 S TENSOR REMARK 3 S11: 0.1086 S12: 0.1813 S13: -0.0931 REMARK 3 S21: -0.0555 S22: -0.0463 S23: 0.0718 REMARK 3 S31: 0.5592 S32: -0.7243 S33: -0.0623 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2214 A 2280 REMARK 3 ORIGIN FOR THE GROUP (A): -29.221 0.367 48.140 REMARK 3 T TENSOR REMARK 3 T11: 0.0687 T22: 0.1764 REMARK 3 T33: 0.0857 T12: 0.0029 REMARK 3 T13: 0.0438 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 2.3713 L22: 0.9182 REMARK 3 L33: 3.0061 L12: 0.2551 REMARK 3 L13: -0.6025 L23: -0.0158 REMARK 3 S TENSOR REMARK 3 S11: -0.0516 S12: 0.1577 S13: 0.1050 REMARK 3 S21: -0.0759 S22: -0.0678 S23: -0.1529 REMARK 3 S31: -0.1490 S32: 0.2641 S33: 0.1194 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4PHU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000201394. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAY-12; 05-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : ALS; APS REMARK 200 BEAMLINE : 5.0.3; 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976; 1.0 REMARK 200 MONOCHROMATOR : SI(220); NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R; MARMOSAIC 300 REMARK 200 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26022 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12000 REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.62300 REMARK 200 R SYM FOR SHELL (I) : 0.62300 REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 10.2.35 REMARK 200 STARTING MODEL: 4EJ4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 29-31% PEG 400,100 MM TRIS PH 8.0. 0.2 REMARK 280 M NA MALONATE,200 UM TAK-875, LIPIDIC CUBIC PHASE, TEMPERATURE REMARK 280 294K. 39.8 % PEG 400, 100 MM BIS-TRIS-PROPANE PH 7.2, 0.1 REMARK 280 AMMONIUM PHOSPHATE (MONOBASIC), 200 UM TAK-875, LIPIDIC CUBIC REMARK 280 PHASE, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.50000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.87000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.50000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.87000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -12 REMARK 465 ASP A -11 REMARK 465 TYR A -10 REMARK 465 LYS A -9 REMARK 465 ASP A -8 REMARK 465 ASP A -7 REMARK 465 ASP A -6 REMARK 465 ASP A -5 REMARK 465 LYS A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 ALA A -1 REMARK 465 THR A 0 REMARK 465 LEU A 112 REMARK 465 GLY A 113 REMARK 465 TYR A 114 REMARK 465 GLN A 115 REMARK 465 ALA A 116 REMARK 465 PHE A 117 REMARK 465 ARG A 118 REMARK 465 ARG A 119 REMARK 465 ARG A 2281 REMARK 465 GLY A 2282 REMARK 465 PRO A 2283 REMARK 465 GLY A 2284 REMARK 465 LEU A 2285 REMARK 465 LYS A 2286 REMARK 465 THR A 2287 REMARK 465 VAL A 2288 REMARK 465 CYS A 2289 REMARK 465 ALA A 2290 REMARK 465 ALA A 2291 REMARK 465 ARG A 2292 REMARK 465 THR A 2293 REMARK 465 GLN A 2294 REMARK 465 GLY A 2295 REMARK 465 GLY A 2296 REMARK 465 LYS A 2297 REMARK 465 SER A 2298 REMARK 465 GLN A 2299 REMARK 465 LYS A 2300 REMARK 465 ALA A 2301 REMARK 465 GLU A 2302 REMARK 465 ASN A 2303 REMARK 465 LEU A 2304 REMARK 465 TYR A 2305 REMARK 465 PHE A 2306 REMARK 465 GLN A 2307 REMARK 465 GLY A 2308 REMARK 465 HIS A 2309 REMARK 465 HIS A 2310 REMARK 465 HIS A 2311 REMARK 465 HIS A 2312 REMARK 465 HIS A 2313 REMARK 465 HIS A 2314 REMARK 465 HIS A 2315 REMARK 465 HIS A 2316 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 37 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 38 CG CD1 CD2 REMARK 470 ARG A1137 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 2240 O33 2YB A 2401 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 37 -64.57 -105.86 REMARK 500 LEU A 38 92.66 94.00 REMARK 500 ASN A 155 58.65 -91.88 REMARK 500 LEU A 171 -50.16 70.77 REMARK 500 PHE A 191 -57.92 -122.13 REMARK 500 ASP A1020 -178.03 -65.35 REMARK 500 SER A1038 111.92 -161.93 REMARK 500 TYR A1161 75.42 -107.03 REMARK 500 CYS A2236 -76.93 -97.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLC A 2402 REMARK 610 OLC A 2403 REMARK 610 OLC A 2405 REMARK 610 OLC A 2406 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2YB A 2401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 2402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 2404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 2405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OLC A 2406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 2407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 2408 DBREF 4PHU A 1 211 UNP O14842 FFAR1_HUMAN 1 211 DBREF 4PHU A 1002 1161 UNP P00720 LYS_BPT4 2 161 DBREF 4PHU A 2214 2300 UNP O14842 FFAR1_HUMAN 214 300 SEQADV 4PHU MET A -12 UNP O14842 EXPRESSION TAG SEQADV 4PHU ASP A -11 UNP O14842 EXPRESSION TAG SEQADV 4PHU TYR A -10 UNP O14842 EXPRESSION TAG SEQADV 4PHU LYS A -9 UNP O14842 EXPRESSION TAG SEQADV 4PHU ASP A -8 UNP O14842 EXPRESSION TAG SEQADV 4PHU ASP A -7 UNP O14842 EXPRESSION TAG SEQADV 4PHU ASP A -6 UNP O14842 EXPRESSION TAG SEQADV 4PHU ASP A -5 UNP O14842 EXPRESSION TAG SEQADV 4PHU LYS A -4 UNP O14842 EXPRESSION TAG SEQADV 4PHU GLY A -3 UNP O14842 EXPRESSION TAG SEQADV 4PHU SER A -2 UNP O14842 EXPRESSION TAG SEQADV 4PHU ALA A -1 UNP O14842 EXPRESSION TAG SEQADV 4PHU THR A 0 UNP O14842 EXPRESSION TAG SEQADV 4PHU ALA A 42 UNP O14842 LEU 42 ENGINEERED MUTATION SEQADV 4PHU ALA A 88 UNP O14842 PHE 88 ENGINEERED MUTATION SEQADV 4PHU ALA A 103 UNP O14842 GLY 103 ENGINEERED MUTATION SEQADV 4PHU PHE A 202 UNP O14842 TYR 202 ENGINEERED MUTATION SEQADV 4PHU GLY A 900 UNP O14842 LINKER SEQADV 4PHU SER A 901 UNP O14842 LINKER SEQADV 4PHU THR A 1054 UNP P00720 CYS 54 ENGINEERED MUTATION SEQADV 4PHU ALA A 1097 UNP P00720 CYS 97 ENGINEERED MUTATION SEQADV 4PHU GLY A 1902 UNP P00720 LINKER SEQADV 4PHU SER A 1903 UNP P00720 LINKER SEQADV 4PHU ALA A 2301 UNP O14842 EXPRESSION TAG SEQADV 4PHU GLU A 2302 UNP O14842 EXPRESSION TAG SEQADV 4PHU ASN A 2303 UNP O14842 EXPRESSION TAG SEQADV 4PHU LEU A 2304 UNP O14842 EXPRESSION TAG SEQADV 4PHU TYR A 2305 UNP O14842 EXPRESSION TAG SEQADV 4PHU PHE A 2306 UNP O14842 EXPRESSION TAG SEQADV 4PHU GLN A 2307 UNP O14842 EXPRESSION TAG SEQADV 4PHU GLY A 2308 UNP O14842 EXPRESSION TAG SEQADV 4PHU HIS A 2309 UNP O14842 EXPRESSION TAG SEQADV 4PHU HIS A 2310 UNP O14842 EXPRESSION TAG SEQADV 4PHU HIS A 2311 UNP O14842 EXPRESSION TAG SEQADV 4PHU HIS A 2312 UNP O14842 EXPRESSION TAG SEQADV 4PHU HIS A 2313 UNP O14842 EXPRESSION TAG SEQADV 4PHU HIS A 2314 UNP O14842 EXPRESSION TAG SEQADV 4PHU HIS A 2315 UNP O14842 EXPRESSION TAG SEQADV 4PHU HIS A 2316 UNP O14842 EXPRESSION TAG SEQRES 1 A 491 MET ASP TYR LYS ASP ASP ASP ASP LYS GLY SER ALA THR SEQRES 2 A 491 MET ASP LEU PRO PRO GLN LEU SER PHE GLY LEU TYR VAL SEQRES 3 A 491 ALA ALA PHE ALA LEU GLY PHE PRO LEU ASN VAL LEU ALA SEQRES 4 A 491 ILE ARG GLY ALA THR ALA HIS ALA ARG LEU ARG LEU THR SEQRES 5 A 491 PRO SER ALA VAL TYR ALA LEU ASN LEU GLY CYS SER ASP SEQRES 6 A 491 LEU LEU LEU THR VAL SER LEU PRO LEU LYS ALA VAL GLU SEQRES 7 A 491 ALA LEU ALA SER GLY ALA TRP PRO LEU PRO ALA SER LEU SEQRES 8 A 491 CYS PRO VAL PHE ALA VAL ALA HIS PHE ALA PRO LEU TYR SEQRES 9 A 491 ALA GLY GLY GLY PHE LEU ALA ALA LEU SER ALA ALA ARG SEQRES 10 A 491 TYR LEU GLY ALA ALA PHE PRO LEU GLY TYR GLN ALA PHE SEQRES 11 A 491 ARG ARG PRO CYS TYR SER TRP GLY VAL CYS ALA ALA ILE SEQRES 12 A 491 TRP ALA LEU VAL LEU CYS HIS LEU GLY LEU VAL PHE GLY SEQRES 13 A 491 LEU GLU ALA PRO GLY GLY TRP LEU ASP HIS SER ASN THR SEQRES 14 A 491 SER LEU GLY ILE ASN THR PRO VAL ASN GLY SER PRO VAL SEQRES 15 A 491 CYS LEU GLU ALA TRP ASP PRO ALA SER ALA GLY PRO ALA SEQRES 16 A 491 ARG PHE SER LEU SER LEU LEU LEU PHE PHE LEU PRO LEU SEQRES 17 A 491 ALA ILE THR ALA PHE CYS PHE VAL GLY CYS LEU ARG ALA SEQRES 18 A 491 LEU ALA ARG GLY SER ASN ILE PHE GLU MET LEU ARG ILE SEQRES 19 A 491 ASP GLU GLY LEU ARG LEU LYS ILE TYR LYS ASP THR GLU SEQRES 20 A 491 GLY TYR TYR THR ILE GLY ILE GLY HIS LEU LEU THR LYS SEQRES 21 A 491 SER PRO SER LEU ASN ALA ALA LYS SER GLU LEU ASP LYS SEQRES 22 A 491 ALA ILE GLY ARG ASN THR ASN GLY VAL ILE THR LYS ASP SEQRES 23 A 491 GLU ALA GLU LYS LEU PHE ASN GLN ASP VAL ASP ALA ALA SEQRES 24 A 491 VAL ARG GLY ILE LEU ARG ASN ALA LYS LEU LYS PRO VAL SEQRES 25 A 491 TYR ASP SER LEU ASP ALA VAL ARG ARG ALA ALA LEU ILE SEQRES 26 A 491 ASN MET VAL PHE GLN MET GLY GLU THR GLY VAL ALA GLY SEQRES 27 A 491 PHE THR ASN SER LEU ARG MET LEU GLN GLN LYS ARG TRP SEQRES 28 A 491 ASP GLU ALA ALA VAL ASN LEU ALA LYS SER ARG TRP TYR SEQRES 29 A 491 ASN GLN THR PRO ASN ARG ALA LYS ARG VAL ILE THR THR SEQRES 30 A 491 PHE ARG THR GLY THR TRP ASP ALA TYR GLY SER LEU THR SEQRES 31 A 491 HIS ARG ARG LYS LEU ARG ALA ALA TRP VAL ALA GLY GLY SEQRES 32 A 491 ALA LEU LEU THR LEU LEU LEU CYS VAL GLY PRO TYR ASN SEQRES 33 A 491 ALA SER ASN VAL ALA SER PHE LEU TYR PRO ASN LEU GLY SEQRES 34 A 491 GLY SER TRP ARG LYS LEU GLY LEU ILE THR GLY ALA TRP SEQRES 35 A 491 SER VAL VAL LEU ASN PRO LEU VAL THR GLY TYR LEU GLY SEQRES 36 A 491 ARG GLY PRO GLY LEU LYS THR VAL CYS ALA ALA ARG THR SEQRES 37 A 491 GLN GLY GLY LYS SER GLN LYS ALA GLU ASN LEU TYR PHE SEQRES 38 A 491 GLN GLY HIS HIS HIS HIS HIS HIS HIS HIS HET 2YB A2401 37 HET OLC A2402 16 HET OLC A2403 8 HET OLC A2404 25 HET OLC A2405 12 HET OLC A2406 9 HET 1PE A2407 16 HET DMS A2408 4 HETNAM 2YB [(3S)-6-({2',6'-DIMETHYL-4'-[3-(METHYLSULFONYL) HETNAM 2 2YB PROPOXY]BIPHENYL-3-YL}METHOXY)-2,3-DIHYDRO-1- HETNAM 3 2YB BENZOFURAN-3-YL]ACETIC ACID HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM DMS DIMETHYL SULFOXIDE HETSYN OLC 1-OLEOYL-R-GLYCEROL HETSYN 1PE PEG400 FORMUL 2 2YB C29 H32 O7 S FORMUL 3 OLC 5(C21 H40 O4) FORMUL 8 1PE C10 H22 O6 FORMUL 9 DMS C2 H6 O S FORMUL 10 HOH *90(H2 O) HELIX 1 AA1 PRO A 4 ARG A 37 1 34 HELIX 2 AA2 THR A 39 ALA A 68 1 30 HELIX 3 AA3 SER A 77 PHE A 110 1 34 HELIX 4 AA4 CYS A 121 ALA A 146 1 26 HELIX 5 AA5 ASP A 175 PHE A 191 1 17 HELIX 6 AA6 PHE A 191 ARG A 211 1 21 HELIX 7 AA7 ASN A 1002 GLY A 1012 1 11 HELIX 8 AA8 SER A 1038 GLY A 1051 1 14 HELIX 9 AA9 THR A 1059 ARG A 1080 1 22 HELIX 10 AB1 LEU A 1084 LEU A 1091 1 8 HELIX 11 AB2 ASP A 1092 GLY A 1113 1 22 HELIX 12 AB3 PHE A 1114 GLN A 1123 1 10 HELIX 13 AB4 ARG A 1125 ALA A 1134 1 10 HELIX 14 AB5 SER A 1136 THR A 1142 1 7 HELIX 15 AB6 THR A 1142 GLY A 1156 1 15 HELIX 16 AB7 SER A 1903 CYS A 2236 1 24 HELIX 17 AB8 CYS A 2236 TYR A 2250 1 15 HELIX 18 AB9 GLY A 2255 TRP A 2267 1 13 HELIX 19 AC1 TRP A 2267 THR A 2276 1 10 SHEET 1 AA1 2 ILE A 160 ASN A 161 0 SHEET 2 AA1 2 VAL A 169 CYS A 170 -1 O VAL A 169 N ASN A 161 SHEET 1 AA2 3 ARG A1014 LYS A1019 0 SHEET 2 AA2 3 TYR A1025 GLY A1028 -1 O THR A1026 N TYR A1018 SHEET 3 AA2 3 HIS A1031 THR A1034 -1 O LEU A1033 N TYR A1025 SSBOND 1 CYS A 79 CYS A 170 1555 1555 2.09 SITE 1 AC1 12 PRO A 80 PHE A 87 TYR A 91 LEU A 135 SITE 2 AC1 12 LEU A 138 GLY A 139 PHE A 142 LEU A 158 SITE 3 AC1 12 TRP A 174 ARG A 183 TYR A2240 ARG A2258 SITE 1 AC2 2 ILE A 27 PHE A2248 SITE 1 AC3 9 PRO A 40 TYR A 44 VAL A 64 ALA A 102 SITE 2 AC3 9 ALA A 103 LEU A 106 TYR A 122 ALA A 129 SITE 3 AC3 9 ILE A 197 SITE 1 AC4 1 CYS A 50 SITE 1 AC5 1 LEU A 7 SITE 1 AC6 5 GLN A 6 LEU A 67 CYS A 121 GLY A 125 SITE 2 AC6 5 CYS A 136 SITE 1 AC7 4 LEU A2234 GLY A2238 PRO A2239 ALA A2242 CRYST1 101.000 61.740 105.700 90.00 108.90 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009901 0.000000 0.003390 0.00000 SCALE2 0.000000 0.016197 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010000 0.00000 MASTER 442 0 8 19 5 0 12 6 0 0 0 38 END