HEADER UNKNOWN FUNCTION 29-MAR-14 4P80 TITLE STRUCTURE OF ANCESTRAL PYRR PROTEIN (ANCGREENPYRR) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANCESTRAL PYRR PROTEIN (GREEN); COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: BACTERIA; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 2 KEYWDS RNA BINDING PROTEINS, RECONSTRUCTED AMINO ACID SEQUENCE, UNKNOWN KEYWDS 2 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR T.PERICA,Y.KONDO,S.TIWARI,S.MCLAUGHLIN,A.STEWARD,N.REUTER,J.CLARKE, AUTHOR 2 S.A.TEICHMANN REVDAT 3 31-DEC-14 4P80 1 JRNL REVDAT 2 24-DEC-14 4P80 1 DBREF REVDAT 1 17-DEC-14 4P80 0 JRNL AUTH T.PERICA,Y.KONDO,S.P.TIWARI,S.H.MCLAUGHLIN,K.R.KEMPLEN, JRNL AUTH 2 X.ZHANG,A.STEWARD,N.REUTER,J.CLARKE,S.A.TEICHMANN JRNL TITL EVOLUTION OF OLIGOMERIC STATE THROUGH ALLOSTERIC PATHWAYS JRNL TITL 2 THAT MIMIC LIGAND BINDING. JRNL REF SCIENCE V. 346 54346 2014 JRNL REFN ESSN 1095-9203 JRNL PMID 25525255 JRNL DOI 10.1126/SCIENCE.1254346 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 54426 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2766 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4026 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.2510 REMARK 3 BIN FREE R VALUE SET COUNT : 232 REMARK 3 BIN FREE R VALUE : 0.2860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2557 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 329 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.64000 REMARK 3 B22 (A**2) : -0.41000 REMARK 3 B33 (A**2) : -0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.51000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.094 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.066 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.861 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.917 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.897 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2701 ; 0.023 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2768 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3664 ; 2.245 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6367 ; 0.980 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 351 ; 6.131 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;37.489 ;24.386 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 532 ;14.812 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;12.372 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 445 ; 0.141 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3037 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 541 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1374 ; 1.306 ; 0.762 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1373 ; 1.300 ; 0.761 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1732 ; 2.050 ; 1.129 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1733 ; 2.051 ; 1.131 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1327 ; 2.217 ; 1.011 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1311 ; 2.205 ; 1.009 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1907 ; 3.431 ; 1.423 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 11392 ; 5.022 ; 7.620 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 11090 ; 4.825 ; 7.276 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4P80 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000200897. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54426 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 20.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2M AMMONIUM SULFATE, 0.08M NA REMARK 280 ACETATE PH4.8, 20% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 61.71500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.51500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 61.71500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.51500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 GLN A 2 REMARK 465 LEU A 71 REMARK 465 TYR A 72 REMARK 465 ARG A 73 REMARK 465 ASP A 74 REMARK 465 ASP A 75 REMARK 465 LEU A 76 REMARK 465 THR A 77 REMARK 465 LYS A 78 REMARK 465 THR A 79 REMARK 465 SER A 80 REMARK 465 ASN A 81 REMARK 465 LYS A 82 REMARK 465 GLU A 83 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 GLN B 2 REMARK 465 LEU B 71 REMARK 465 TYR B 72 REMARK 465 ARG B 73 REMARK 465 ASP B 74 REMARK 465 ASP B 75 REMARK 465 LEU B 76 REMARK 465 THR B 77 REMARK 465 LYS B 78 REMARK 465 THR B 79 REMARK 465 SER B 80 REMARK 465 ASN B 81 REMARK 465 LYS B 82 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 340 O HOH A 376 1.81 REMARK 500 O HOH B 338 O HOH B 378 1.87 REMARK 500 O HOH A 441 O HOH A 463 2.00 REMARK 500 O HOH B 315 O HOH B 328 2.07 REMARK 500 NE2 GLN B 164 O HOH B 301 2.08 REMARK 500 O HOH A 324 O HOH A 457 2.14 REMARK 500 OE1 GLN B 98 O HOH B 413 2.15 REMARK 500 O HOH A 441 O HOH A 459 2.16 REMARK 500 O HOH B 309 O HOH B 367 2.18 REMARK 500 O HOH A 450 O HOH A 462 2.18 REMARK 500 NH1 ARG A 145 O HOH A 436 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 309 O HOH B 306 4555 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 159 CD GLU A 159 OE2 0.072 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 9 CB - CG - OD1 ANGL. DEV. = 6.1 DEGREES REMARK 500 ARG A 14 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 14 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP A 97 CB - CG - OD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ASP A 105 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 40 178.92 70.45 REMARK 500 ASP A 97 13.22 59.99 REMARK 500 TYR A 108 -95.37 -130.53 REMARK 500 HIS A 139 33.03 72.91 REMARK 500 LYS B 40 -172.42 70.33 REMARK 500 TYR B 108 -97.67 -130.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 443 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH A 460 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH A 461 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH B 461 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH B 463 DISTANCE = 6.89 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4P81 RELATED DB: PDB REMARK 900 RELATED ID: 4P82 RELATED DB: PDB REMARK 900 RELATED ID: 4P83 RELATED DB: PDB REMARK 900 RELATED ID: 4P84 RELATED DB: PDB REMARK 900 RELATED ID: 4P86 RELATED DB: PDB DBREF 4P80 A 0 179 PDB 4P80 4P80 0 179 DBREF 4P80 B 0 179 PDB 4P80 4P80 0 179 SEQRES 1 A 180 GLY SER GLN GLU LYS ALA VAL VAL LEU ASP GLU GLN ALA SEQRES 2 A 180 ILE ARG ARG ALA LEU THR ARG ILE ALA HIS GLU MET ILE SEQRES 3 A 180 GLU ARG ASN LYS GLY MET ASN ASN CYS ILE LEU VAL GLY SEQRES 4 A 180 ILE LYS THR ARG GLY ILE TYR LEU ALA LYS ARG LEU ALA SEQRES 5 A 180 GLU ARG ILE GLU GLN ILE GLU GLY ASN LYS VAL THR VAL SEQRES 6 A 180 GLY GLU LEU ASP ILE THR LEU TYR ARG ASP ASP LEU THR SEQRES 7 A 180 LYS THR SER ASN LYS GLU PRO LEU VAL LYS GLY ALA ASP SEQRES 8 A 180 ILE PRO VAL ASP ILE THR ASP GLN LYS VAL ILE LEU VAL SEQRES 9 A 180 ASP ASP VAL LEU TYR THR GLY ARG THR VAL ARG ALA ALA SEQRES 10 A 180 MET ASP ALA LEU VAL ASP VAL GLY ARG PRO SER SER ILE SEQRES 11 A 180 GLN LEU ALA VAL LEU VAL ASP ARG GLY HIS ARG GLU LEU SEQRES 12 A 180 PRO ILE ARG ALA ASP TYR ILE GLY LYS ASN ILE PRO THR SEQRES 13 A 180 SER LYS SER GLU LYS VAL MET VAL GLN LEU SER GLU VAL SEQRES 14 A 180 ASP GLY GLN ASP LEU VAL ALA ILE TYR GLU LYS SEQRES 1 B 180 GLY SER GLN GLU LYS ALA VAL VAL LEU ASP GLU GLN ALA SEQRES 2 B 180 ILE ARG ARG ALA LEU THR ARG ILE ALA HIS GLU MET ILE SEQRES 3 B 180 GLU ARG ASN LYS GLY MET ASN ASN CYS ILE LEU VAL GLY SEQRES 4 B 180 ILE LYS THR ARG GLY ILE TYR LEU ALA LYS ARG LEU ALA SEQRES 5 B 180 GLU ARG ILE GLU GLN ILE GLU GLY ASN LYS VAL THR VAL SEQRES 6 B 180 GLY GLU LEU ASP ILE THR LEU TYR ARG ASP ASP LEU THR SEQRES 7 B 180 LYS THR SER ASN LYS GLU PRO LEU VAL LYS GLY ALA ASP SEQRES 8 B 180 ILE PRO VAL ASP ILE THR ASP GLN LYS VAL ILE LEU VAL SEQRES 9 B 180 ASP ASP VAL LEU TYR THR GLY ARG THR VAL ARG ALA ALA SEQRES 10 B 180 MET ASP ALA LEU VAL ASP VAL GLY ARG PRO SER SER ILE SEQRES 11 B 180 GLN LEU ALA VAL LEU VAL ASP ARG GLY HIS ARG GLU LEU SEQRES 12 B 180 PRO ILE ARG ALA ASP TYR ILE GLY LYS ASN ILE PRO THR SEQRES 13 B 180 SER LYS SER GLU LYS VAL MET VAL GLN LEU SER GLU VAL SEQRES 14 B 180 ASP GLY GLN ASP LEU VAL ALA ILE TYR GLU LYS HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 B 201 5 HET SO4 B 202 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *329(H2 O) HELIX 1 AA1 ASP A 9 ASN A 28 1 20 HELIX 2 AA2 LYS A 29 ASN A 32 5 4 HELIX 3 AA3 ILE A 39 GLY A 59 1 21 HELIX 4 AA4 GLY A 110 ARG A 125 1 16 HELIX 5 AA5 ASP B 9 ASN B 28 1 20 HELIX 6 AA6 LYS B 29 ASN B 32 5 4 HELIX 7 AA7 LYS B 40 GLY B 59 1 20 HELIX 8 AA8 GLY B 110 GLY B 124 1 15 SHEET 1 AA1 3 LYS A 4 LEU A 8 0 SHEET 2 AA1 3 LEU A 173 TYR A 177 -1 O ILE A 176 N ALA A 5 SHEET 3 AA1 3 LYS A 160 GLN A 164 -1 N LYS A 160 O TYR A 177 SHEET 1 AA2 6 VAL A 86 ASP A 90 0 SHEET 2 AA2 6 VAL A 64 ILE A 69 -1 N ASP A 68 O GLY A 88 SHEET 3 AA2 6 ILE A 35 GLY A 38 1 N LEU A 36 O GLY A 65 SHEET 4 AA2 6 LYS A 99 LEU A 107 1 O ILE A 101 N ILE A 35 SHEET 5 AA2 6 SER A 128 ASP A 136 1 O ALA A 132 N LEU A 102 SHEET 6 AA2 6 TYR A 148 ASN A 152 1 O TYR A 148 N VAL A 133 SHEET 1 AA3 3 LYS B 4 LEU B 8 0 SHEET 2 AA3 3 LEU B 173 TYR B 177 -1 O ILE B 176 N ALA B 5 SHEET 3 AA3 3 LYS B 160 GLN B 164 -1 N LYS B 160 O TYR B 177 SHEET 1 AA4 6 LEU B 85 ASP B 90 0 SHEET 2 AA4 6 VAL B 64 THR B 70 -1 N THR B 70 O LEU B 85 SHEET 3 AA4 6 ILE B 35 ILE B 39 1 N LEU B 36 O GLY B 65 SHEET 4 AA4 6 LYS B 99 LEU B 107 1 O ILE B 101 N VAL B 37 SHEET 5 AA4 6 SER B 128 ASP B 136 1 O GLN B 130 N LEU B 102 SHEET 6 AA4 6 TYR B 148 ASN B 152 1 O TYR B 148 N VAL B 133 SITE 1 AC1 7 ARG A 14 ARG A 15 HOH A 301 HOH A 320 SITE 2 AC1 7 HIS B 139 LYS B 157 HOH B 306 SITE 1 AC2 11 LYS A 40 ASP A 104 VAL A 106 LEU A 107 SITE 2 AC2 11 TYR A 108 THR A 109 GLY A 110 ARG A 111 SITE 3 AC2 11 THR A 112 VAL A 113 HOH A 349 SITE 1 AC3 7 HIS A 139 SER A 156 LYS A 157 HOH A 311 SITE 2 AC3 7 GLN B 11 ARG B 14 ARG B 15 SITE 1 AC4 11 LYS B 40 ASP B 104 VAL B 106 LEU B 107 SITE 2 AC4 11 TYR B 108 THR B 109 GLY B 110 ARG B 111 SITE 3 AC4 11 THR B 112 VAL B 113 HOH B 346 CRYST1 123.430 67.030 56.820 90.00 101.06 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008102 0.000000 0.001584 0.00000 SCALE2 0.000000 0.014919 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017933 0.00000 MASTER 421 0 4 8 18 0 10 6 0 0 0 28 END