HEADER LYASE 05-MAR-14 4P2X TITLE SWAPPED DIMER OF MYCOBACTERIAL ADENYLYL CYCLASE RV1625C: FORM 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLATE CYCLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ATP PYROPHOSPHATE-LYASE,ADENYLYL CYCLASE; COMPND 5 EC: 4.6.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: CYA, RV1625C, MT1661, MTCY01B2.17C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: P-PROEXHT KEYWDS ADENYLYL CYCLASE, BETA-ALPHA-BETA SANDWICH, DOMAIN SWAPPING, SIGNAL KEYWDS 2 TRANSDUCTION, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR D.V.BARATHY,R.MATTOO,S.S.VISWESWARIAH,K.SUGUNA REVDAT 3 01-NOV-17 4P2X 1 SOURCE KEYWDS REMARK REVDAT 2 22-OCT-14 4P2X 1 JRNL REVDAT 1 17-SEP-14 4P2X 0 JRNL AUTH D.BARATHY,R.MATTOO,S.VISWESWARIAH,K.SUGUNA JRNL TITL NEW STRUCTURAL FORMS OF A MYCOBACTERIAL ADENYLYL CYCLASE JRNL TITL 2 RV1625C. JRNL REF IUCRJ V. 1 338 2014 JRNL REFN ESSN 2052-2525 JRNL PMID 25295175 JRNL DOI 10.1107/S2052252514016741 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 15982 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 849 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1185 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2535 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 53 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.33000 REMARK 3 B22 (A**2) : -0.33000 REMARK 3 B33 (A**2) : 1.07000 REMARK 3 B12 (A**2) : -0.33000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.334 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.258 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.179 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.476 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2622 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2509 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3555 ; 1.151 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5728 ; 0.705 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 333 ; 5.610 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;32.391 ;23.684 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 375 ;16.873 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;14.128 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 407 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2971 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 587 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4P2X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000200570. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.978565 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : BENT COLLIMATING MIRROR AND REMARK 200 TOROID REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM 1.0.7 REMARK 200 DATA SCALING SOFTWARE : SCALA CCP4 6.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16832 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 37.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.50 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 11.50 REMARK 200 R MERGE FOR SHELL (I) : 0.52600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 4P2M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULPHATE, TRIS PH 8.5, REMARK 280 25% PEG 3350, EVAPORATION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.78000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.39000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 66.58500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 22.19500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 110.97500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: DIMER IN SOLUTION CONFIRMED BY GEL FILTRATION REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 187 REMARK 465 SER A 188 REMARK 465 TYR A 189 REMARK 465 TYR A 190 REMARK 465 HIS A 191 REMARK 465 HIS A 192 REMARK 465 HIS A 193 REMARK 465 HIS A 194 REMARK 465 HIS A 195 REMARK 465 HIS A 196 REMARK 465 ASP A 197 REMARK 465 TYR A 198 REMARK 465 ASP A 199 REMARK 465 ILE A 200 REMARK 465 PRO A 201 REMARK 465 THR A 202 REMARK 465 THR A 203 REMARK 465 GLU A 204 REMARK 465 ASN A 205 REMARK 465 LEU A 206 REMARK 465 TYR A 207 REMARK 465 PHE A 208 REMARK 465 GLN A 209 REMARK 465 GLY A 210 REMARK 465 ALA A 211 REMARK 465 MET A 212 REMARK 465 GLU A 213 REMARK 465 ALA A 214 REMARK 465 GLU A 215 REMARK 465 HIS A 216 REMARK 465 ASP A 217 REMARK 465 ARG A 218 REMARK 465 SER A 219 REMARK 465 GLU A 220 REMARK 465 ALA A 221 REMARK 465 LEU A 222 REMARK 465 LEU A 223 REMARK 465 ALA A 224 REMARK 465 ASN A 225 REMARK 465 MET A 226 REMARK 465 LEU A 227 REMARK 465 PRO A 228 REMARK 465 ALA A 229 REMARK 465 SER A 230 REMARK 465 ILE A 231 REMARK 465 ALA A 232 REMARK 465 GLU A 233 REMARK 465 ARG A 234 REMARK 465 LEU A 235 REMARK 465 LYS A 236 REMARK 465 GLU A 237 REMARK 465 PRO A 238 REMARK 465 GLU A 239 REMARK 465 GLY A 259 REMARK 465 PHE A 260 REMARK 465 THR A 261 REMARK 465 GLU A 262 REMARK 465 ARG A 263 REMARK 465 ALA A 264 REMARK 465 SER A 265 REMARK 465 SER A 266 REMARK 465 THR A 267 REMARK 465 ALA A 268 REMARK 465 ASP A 271 REMARK 465 VAL A 297 REMARK 465 SER A 298 REMARK 465 GLY A 338 REMARK 465 VAL A 410 REMARK 465 LYS A 411 REMARK 465 GLY A 412 REMARK 465 LYS A 413 REMARK 465 GLY A 414 REMARK 465 VAL A 426 REMARK 465 ALA A 427 REMARK 465 ALA A 428 REMARK 465 ASP A 429 REMARK 465 PRO A 430 REMARK 465 GLY A 431 REMARK 465 GLU A 432 REMARK 465 VAL A 433 REMARK 465 ARG A 434 REMARK 465 GLY A 435 REMARK 465 ALA A 436 REMARK 465 GLU A 437 REMARK 465 PRO A 438 REMARK 465 ARG A 439 REMARK 465 THR A 440 REMARK 465 ALA A 441 REMARK 465 GLY A 442 REMARK 465 VAL A 443 REMARK 465 MET B 187 REMARK 465 SER B 188 REMARK 465 TYR B 189 REMARK 465 TYR B 190 REMARK 465 HIS B 191 REMARK 465 HIS B 192 REMARK 465 HIS B 193 REMARK 465 HIS B 194 REMARK 465 HIS B 195 REMARK 465 HIS B 196 REMARK 465 ASP B 197 REMARK 465 TYR B 198 REMARK 465 ASP B 199 REMARK 465 ILE B 200 REMARK 465 PRO B 201 REMARK 465 THR B 202 REMARK 465 THR B 203 REMARK 465 GLU B 204 REMARK 465 ASN B 205 REMARK 465 LEU B 206 REMARK 465 TYR B 207 REMARK 465 PHE B 208 REMARK 465 GLN B 209 REMARK 465 GLY B 210 REMARK 465 ALA B 211 REMARK 465 MET B 212 REMARK 465 GLU B 213 REMARK 465 ALA B 214 REMARK 465 GLU B 215 REMARK 465 HIS B 216 REMARK 465 ASP B 217 REMARK 465 ARG B 218 REMARK 465 SER B 219 REMARK 465 GLU B 220 REMARK 465 ALA B 221 REMARK 465 LEU B 222 REMARK 465 LEU B 223 REMARK 465 ALA B 224 REMARK 465 ASN B 225 REMARK 465 MET B 226 REMARK 465 LEU B 227 REMARK 465 PRO B 228 REMARK 465 ALA B 229 REMARK 465 SER B 230 REMARK 465 ILE B 231 REMARK 465 ALA B 232 REMARK 465 GLU B 233 REMARK 465 ARG B 234 REMARK 465 LEU B 235 REMARK 465 LYS B 236 REMARK 465 GLU B 237 REMARK 465 PRO B 238 REMARK 465 GLY B 259 REMARK 465 PHE B 260 REMARK 465 THR B 261 REMARK 465 GLU B 262 REMARK 465 ARG B 263 REMARK 465 ALA B 264 REMARK 465 SER B 265 REMARK 465 SER B 266 REMARK 465 THR B 267 REMARK 465 ALA B 268 REMARK 465 PRO B 269 REMARK 465 ALA B 270 REMARK 465 ASP B 271 REMARK 465 LEU B 272 REMARK 465 VAL B 273 REMARK 465 PRO B 336 REMARK 465 ASP B 381 REMARK 465 SER B 382 REMARK 465 ASP B 429 REMARK 465 PRO B 430 REMARK 465 GLY B 431 REMARK 465 GLU B 432 REMARK 465 VAL B 433 REMARK 465 ARG B 434 REMARK 465 GLY B 435 REMARK 465 ALA B 436 REMARK 465 GLU B 437 REMARK 465 PRO B 438 REMARK 465 ARG B 439 REMARK 465 THR B 440 REMARK 465 ALA B 441 REMARK 465 GLY B 442 REMARK 465 VAL B 443 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 272 CG CD1 CD2 REMARK 470 LEU A 276 CG CD1 CD2 REMARK 470 ARG A 278 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 285 CG CD OE1 OE2 REMARK 470 LYS A 296 CG CD CE NZ REMARK 470 LEU A 333 CG CD1 CD2 REMARK 470 LYS A 334 CG CD CE NZ REMARK 470 ARG A 337 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 344 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 361 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 376 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 403 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 409 CG OD1 ND2 REMARK 470 VAL A 415 CG1 CG2 REMARK 470 GLU B 239 CG CD OE1 OE2 REMARK 470 ARG B 240 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 246 CG CD CE NZ REMARK 470 ARG B 274 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 276 CG CD1 CD2 REMARK 470 ARG B 278 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 285 CG CD OE1 OE2 REMARK 470 GLN B 289 CG CD OE1 NE2 REMARK 470 LYS B 296 CG CD CE NZ REMARK 470 ASP B 300 CB CG OD1 OD2 REMARK 470 GLN B 332 CG CD OE1 NE2 REMARK 470 LYS B 334 CG CD CE NZ REMARK 470 ARG B 337 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 378 CG CD OE1 OE2 REMARK 470 THR B 380 OG1 CG2 REMARK 470 GLU B 391 CG CD OE1 OE2 REMARK 470 ARG B 403 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 411 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 300 39.60 -98.84 REMARK 500 ASP A 314 31.49 -96.03 REMARK 500 SER B 379 174.56 58.83 REMARK 500 LYS B 413 -60.72 -131.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 504 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 245 OD1 REMARK 620 2 TYR A 247 OH 96.2 REMARK 620 3 ALA A 354 O 109.4 108.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 503 DBREF 4P2X A 212 443 UNP P0A4Y0 CYA1_MYCTU 212 443 DBREF 4P2X B 212 443 UNP P0A4Y0 CYA1_MYCTU 212 443 SEQADV 4P2X MET A 187 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X SER A 188 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR A 189 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR A 190 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS A 191 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS A 192 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS A 193 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS A 194 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS A 195 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS A 196 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ASP A 197 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR A 198 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ASP A 199 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ILE A 200 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X PRO A 201 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X THR A 202 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X THR A 203 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X GLU A 204 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ASN A 205 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X LEU A 206 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR A 207 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X PHE A 208 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X GLN A 209 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X GLY A 210 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ALA A 211 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X MET B 187 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X SER B 188 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR B 189 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR B 190 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS B 191 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS B 192 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS B 193 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS B 194 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS B 195 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS B 196 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ASP B 197 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR B 198 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ASP B 199 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ILE B 200 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X PRO B 201 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X THR B 202 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X THR B 203 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X GLU B 204 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ASN B 205 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X LEU B 206 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR B 207 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X PHE B 208 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X GLN B 209 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X GLY B 210 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ALA B 211 UNP P0A4Y0 EXPRESSION TAG SEQRES 1 A 257 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 A 257 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 A 257 GLU ALA GLU HIS ASP ARG SER GLU ALA LEU LEU ALA ASN SEQRES 4 A 257 MET LEU PRO ALA SER ILE ALA GLU ARG LEU LYS GLU PRO SEQRES 5 A 257 GLU ARG ASN ILE ILE ALA ASP LYS TYR ASP GLU ALA SER SEQRES 6 A 257 VAL LEU PHE ALA ASP ILE VAL GLY PHE THR GLU ARG ALA SEQRES 7 A 257 SER SER THR ALA PRO ALA ASP LEU VAL ARG PHE LEU ASP SEQRES 8 A 257 ARG LEU TYR SER ALA PHE ASP GLU LEU VAL ASP GLN HIS SEQRES 9 A 257 GLY LEU GLU LYS ILE LYS VAL SER GLY ASP SER TYR MET SEQRES 10 A 257 VAL VAL SER GLY VAL PRO ARG PRO ARG PRO ASP HIS THR SEQRES 11 A 257 GLN ALA LEU ALA ASP PHE ALA LEU ASP MET THR ASN VAL SEQRES 12 A 257 ALA ALA GLN LEU LYS ASP PRO ARG GLY ASN PRO VAL PRO SEQRES 13 A 257 LEU ARG VAL GLY LEU ALA THR GLY PRO VAL VAL ALA GLY SEQRES 14 A 257 VAL VAL GLY SER ARG ARG PHE PHE TYR ASP VAL TRP GLY SEQRES 15 A 257 ASP ALA VAL ASN VAL ALA SER ARG MET GLU SER THR ASP SEQRES 16 A 257 SER VAL GLY GLN ILE GLN VAL PRO ASP GLU VAL TYR GLU SEQRES 17 A 257 ARG LEU LYS ASP ASP PHE VAL LEU ARG GLU ARG GLY HIS SEQRES 18 A 257 ILE ASN VAL LYS GLY LYS GLY VAL MET ARG THR TRP TYR SEQRES 19 A 257 LEU ILE GLY ARG LYS VAL ALA ALA ASP PRO GLY GLU VAL SEQRES 20 A 257 ARG GLY ALA GLU PRO ARG THR ALA GLY VAL SEQRES 1 B 257 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 B 257 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 B 257 GLU ALA GLU HIS ASP ARG SER GLU ALA LEU LEU ALA ASN SEQRES 4 B 257 MET LEU PRO ALA SER ILE ALA GLU ARG LEU LYS GLU PRO SEQRES 5 B 257 GLU ARG ASN ILE ILE ALA ASP LYS TYR ASP GLU ALA SER SEQRES 6 B 257 VAL LEU PHE ALA ASP ILE VAL GLY PHE THR GLU ARG ALA SEQRES 7 B 257 SER SER THR ALA PRO ALA ASP LEU VAL ARG PHE LEU ASP SEQRES 8 B 257 ARG LEU TYR SER ALA PHE ASP GLU LEU VAL ASP GLN HIS SEQRES 9 B 257 GLY LEU GLU LYS ILE LYS VAL SER GLY ASP SER TYR MET SEQRES 10 B 257 VAL VAL SER GLY VAL PRO ARG PRO ARG PRO ASP HIS THR SEQRES 11 B 257 GLN ALA LEU ALA ASP PHE ALA LEU ASP MET THR ASN VAL SEQRES 12 B 257 ALA ALA GLN LEU LYS ASP PRO ARG GLY ASN PRO VAL PRO SEQRES 13 B 257 LEU ARG VAL GLY LEU ALA THR GLY PRO VAL VAL ALA GLY SEQRES 14 B 257 VAL VAL GLY SER ARG ARG PHE PHE TYR ASP VAL TRP GLY SEQRES 15 B 257 ASP ALA VAL ASN VAL ALA SER ARG MET GLU SER THR ASP SEQRES 16 B 257 SER VAL GLY GLN ILE GLN VAL PRO ASP GLU VAL TYR GLU SEQRES 17 B 257 ARG LEU LYS ASP ASP PHE VAL LEU ARG GLU ARG GLY HIS SEQRES 18 B 257 ILE ASN VAL LYS GLY LYS GLY VAL MET ARG THR TRP TYR SEQRES 19 B 257 LEU ILE GLY ARG LYS VAL ALA ALA ASP PRO GLY GLU VAL SEQRES 20 B 257 ARG GLY ALA GLU PRO ARG THR ALA GLY VAL HET SO4 A 501 5 HET PEG A 502 7 HET PEG A 503 7 HET MG A 504 1 HET PEG B 501 7 HET PEG B 502 7 HET CL B 503 1 HETNAM SO4 SULFATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION FORMUL 3 SO4 O4 S 2- FORMUL 4 PEG 4(C4 H10 O3) FORMUL 6 MG MG 2+ FORMUL 9 CL CL 1- FORMUL 10 HOH *53(H2 O) HELIX 1 AA1 VAL A 273 HIS A 290 1 18 HELIX 2 AA2 ASP A 314 LEU A 333 1 20 HELIX 3 AA3 GLY A 368 THR A 380 1 13 HELIX 4 AA4 ASP A 390 LYS A 397 1 8 HELIX 5 AA5 PHE B 275 GLY B 291 1 17 HELIX 6 AA6 ASP B 314 LEU B 333 1 20 HELIX 7 AA7 GLY B 368 ARG B 376 1 9 HELIX 8 AA8 ASP B 390 LYS B 397 1 8 SHEET 1 AA1 8 GLU A 293 ILE A 295 0 SHEET 2 AA1 8 SER A 301 SER A 306 -1 O VAL A 305 N GLU A 293 SHEET 3 AA1 8 ILE A 242 ILE A 257 -1 N ALA A 255 O TYR A 302 SHEET 4 AA1 8 LEU A 343 TRP A 367 -1 O VAL A 352 N TYR A 247 SHEET 5 AA1 8 LEU B 343 TRP B 367 -1 O ARG B 361 N SER A 359 SHEET 6 AA1 8 ILE B 242 ILE B 257 -1 N TYR B 247 O VAL B 352 SHEET 7 AA1 8 TYR B 302 SER B 306 -1 O VAL B 304 N LEU B 253 SHEET 8 AA1 8 GLU B 293 ILE B 295 -1 N GLU B 293 O VAL B 305 SHEET 1 AA2 8 PHE A 400 ILE A 408 0 SHEET 2 AA2 8 MET A 416 ARG A 424 -1 O MET A 416 N ILE A 408 SHEET 3 AA2 8 ILE A 386 PRO A 389 -1 N VAL A 388 O TRP A 419 SHEET 4 AA2 8 LEU B 343 TRP B 367 1 O VAL B 345 N GLN A 387 SHEET 5 AA2 8 LEU A 343 TRP A 367 -1 N SER A 359 O ARG B 361 SHEET 6 AA2 8 ILE B 386 PRO B 389 1 O GLN B 387 N VAL A 345 SHEET 7 AA2 8 GLY B 414 ARG B 424 -1 O LEU B 421 N ILE B 386 SHEET 8 AA2 8 PHE B 400 VAL B 410 -1 N ARG B 403 O TYR B 420 LINK OD1 ASP A 245 MG MG A 504 1555 1555 2.40 LINK OH TYR A 247 MG MG A 504 1555 1555 2.84 LINK O ALA A 354 MG MG A 504 1555 1555 2.74 CISPEP 1 VAL A 308 PRO A 309 0 -1.12 CISPEP 2 VAL B 308 PRO B 309 0 -0.11 SITE 1 AC1 5 ARG A 405 LYS B 411 GLY B 412 ARG B 424 SITE 2 AC1 5 ALA B 427 SITE 1 AC2 3 LEU A 421 ILE A 422 THR B 327 SITE 1 AC3 7 ARG A 240 TYR A 247 ASP A 248 GLU A 249 SITE 2 AC3 7 GLY A 307 PRO A 311 ARG A 312 SITE 1 AC4 4 ASP A 245 TYR A 247 ALA A 354 GLY A 355 SITE 1 AC5 6 GLY B 291 GLY B 307 VAL B 308 PRO B 309 SITE 2 AC5 6 ARG B 310 ARG B 312 SITE 1 AC6 4 ARG A 395 ASP B 314 THR B 316 GLN B 317 CRYST1 75.570 75.570 133.170 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013233 0.007640 0.000000 0.00000 SCALE2 0.000000 0.015280 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007509 0.00000 MASTER 526 0 7 8 16 0 9 6 0 0 0 40 END