HEADER LYASE 04-MAR-14 4P2M TITLE SWAPPED DIMER OF MYCOBACTERIAL ADENYLYL CYCLASE RV1625C: FORM 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLATE CYCLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ATP PYROPHOSPHATE-LYASE, ADENYLYL CYCLASE; COMPND 5 EC: 4.6.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: CYA, RV1625C, MT1661, MTCY01B2.17C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: P-PROEX-HT KEYWDS BETA-ALPHA-BETA SANDWICH, DOMAIN SWAPPING, ADENYLYL CYCLASE, SIGNAL KEYWDS 2 TRANSDUCTION, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR D.V.BARATHY,R.MATTOO,S.S.VISWESWARIAH,K.SUGUNA REVDAT 3 01-NOV-17 4P2M 1 SOURCE KEYWDS REMARK REVDAT 2 22-OCT-14 4P2M 1 JRNL REVDAT 1 17-SEP-14 4P2M 0 JRNL AUTH D.BARATHY,R.MATTOO,S.VISWESWARIAH,K.SUGUNA JRNL TITL NEW STRUCTURAL FORMS OF A MYCOBACTERIAL ADENYLYL CYCLASE JRNL TITL 2 RV1625C. JRNL REF IUCRJ V. 1 338 2014 JRNL REFN ESSN 2052-2525 JRNL PMID 25295175 JRNL DOI 10.1107/S2052252514016741 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 11085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.400 REMARK 3 FREE R VALUE TEST SET COUNT : 513 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 838 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.2670 REMARK 3 BIN FREE R VALUE SET COUNT : 31 REMARK 3 BIN FREE R VALUE : 0.3290 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2529 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 73 REMARK 3 SOLVENT ATOMS : 65 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.14000 REMARK 3 B22 (A**2) : 0.14000 REMARK 3 B33 (A**2) : -0.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.295 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.072 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.223 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.915 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.875 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2636 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3548 ; 1.178 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 340 ; 5.644 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 106 ;34.372 ;23.208 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 365 ;19.167 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;18.925 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 393 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1983 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4P2M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000200575. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : BENT COLLIMATING MIRROR AND REMARK 200 TOROID REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM CCP4 VERSION 6.3 REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11639 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 46.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 23.00 REMARK 200 R MERGE (I) : 0.13900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 23.00 REMARK 200 R MERGE FOR SHELL (I) : 0.55600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 4P2F REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULPHATE, TRIS PH 8.5, REMARK 280 25% PEG 3350, EVAPORATION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.16000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.58000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 66.87000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 22.29000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 111.45000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MONOMER IN SOLUTION CONFIRMED BY GEL FILTRATION REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 210 REMARK 465 ALA A 211 REMARK 465 MET A 212 REMARK 465 GLU A 213 REMARK 465 ALA A 214 REMARK 465 GLU A 215 REMARK 465 HIS A 216 REMARK 465 ASP A 217 REMARK 465 ARG A 218 REMARK 465 SER A 219 REMARK 465 GLU A 220 REMARK 465 ALA A 221 REMARK 465 LEU A 222 REMARK 465 LEU A 223 REMARK 465 ALA A 224 REMARK 465 ASN A 225 REMARK 465 MET A 226 REMARK 465 LEU A 227 REMARK 465 PRO A 228 REMARK 465 ALA A 229 REMARK 465 SER A 230 REMARK 465 ILE A 231 REMARK 465 ALA A 232 REMARK 465 GLU A 233 REMARK 465 ARG A 234 REMARK 465 LEU A 235 REMARK 465 LYS A 236 REMARK 465 GLU A 237 REMARK 465 PRO A 238 REMARK 465 GLU A 239 REMARK 465 GLY A 259 REMARK 465 PHE A 260 REMARK 465 THR A 261 REMARK 465 GLU A 262 REMARK 465 ARG A 263 REMARK 465 ALA A 264 REMARK 465 SER A 265 REMARK 465 SER A 266 REMARK 465 THR A 267 REMARK 465 ALA A 268 REMARK 465 PRO A 269 REMARK 465 ALA A 270 REMARK 465 ASP A 271 REMARK 465 LEU A 272 REMARK 465 LYS A 334 REMARK 465 PRO A 340 REMARK 465 GLY A 412 REMARK 465 LYS A 413 REMARK 465 ALA A 427 REMARK 465 ALA A 428 REMARK 465 ASP A 429 REMARK 465 PRO A 430 REMARK 465 GLY A 431 REMARK 465 GLU A 432 REMARK 465 VAL A 433 REMARK 465 ARG A 434 REMARK 465 GLY A 435 REMARK 465 ALA A 436 REMARK 465 GLU A 437 REMARK 465 PRO A 438 REMARK 465 ARG A 439 REMARK 465 THR A 440 REMARK 465 ALA A 441 REMARK 465 GLY A 442 REMARK 465 VAL A 443 REMARK 465 GLY B 210 REMARK 465 ALA B 211 REMARK 465 MET B 212 REMARK 465 GLU B 213 REMARK 465 ALA B 214 REMARK 465 GLU B 215 REMARK 465 HIS B 216 REMARK 465 ASP B 217 REMARK 465 ARG B 218 REMARK 465 SER B 219 REMARK 465 GLU B 220 REMARK 465 ALA B 221 REMARK 465 LEU B 222 REMARK 465 LEU B 223 REMARK 465 ALA B 224 REMARK 465 ASN B 225 REMARK 465 MET B 226 REMARK 465 LEU B 227 REMARK 465 PRO B 228 REMARK 465 ALA B 229 REMARK 465 SER B 230 REMARK 465 ILE B 231 REMARK 465 ALA B 232 REMARK 465 GLU B 233 REMARK 465 ARG B 234 REMARK 465 LEU B 235 REMARK 465 LYS B 236 REMARK 465 GLU B 237 REMARK 465 PRO B 238 REMARK 465 GLU B 239 REMARK 465 GLU B 262 REMARK 465 ARG B 263 REMARK 465 ALA B 264 REMARK 465 SER B 265 REMARK 465 SER B 266 REMARK 465 THR B 267 REMARK 465 ALA B 268 REMARK 465 PRO B 269 REMARK 465 ALA B 270 REMARK 465 VAL B 410 REMARK 465 ASP B 429 REMARK 465 PRO B 430 REMARK 465 GLY B 431 REMARK 465 GLU B 432 REMARK 465 VAL B 433 REMARK 465 ARG B 434 REMARK 465 GLY B 435 REMARK 465 ALA B 436 REMARK 465 GLU B 437 REMARK 465 PRO B 438 REMARK 465 ARG B 439 REMARK 465 THR B 440 REMARK 465 ALA B 441 REMARK 465 GLY B 442 REMARK 465 VAL B 443 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 240 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 249 CG CD OE1 OE2 REMARK 470 ILE A 257 CB CG1 CG2 CD1 REMARK 470 VAL A 258 CB CG1 CG2 REMARK 470 VAL A 273 CB CG1 CG2 REMARK 470 PHE A 275 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 276 CG CD1 CD2 REMARK 470 ASP A 277 CB CG OD1 OD2 REMARK 470 GLU A 285 CG CD OE1 OE2 REMARK 470 ASP A 288 CG OD1 OD2 REMARK 470 ALA A 331 CB REMARK 470 GLN A 332 CB CG CD OE1 NE2 REMARK 470 LEU A 333 CG CD1 CD2 REMARK 470 ASP A 335 CB CG OD1 OD2 REMARK 470 ARG A 337 CB CG CD NE CZ NH1 NH2 REMARK 470 ASN A 339 CG OD1 ND2 REMARK 470 VAL A 341 CG1 CG2 REMARK 470 LEU A 343 CB CG CD1 CD2 REMARK 470 ARG A 344 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 363 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 369 CG OD1 OD2 REMARK 470 ARG A 376 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 399 CG OD1 OD2 REMARK 470 ARG A 403 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 410 CG1 CG2 REMARK 470 LYS A 411 CG CD CE NZ REMARK 470 VAL A 426 CG1 CG2 REMARK 470 ARG B 240 CB CG CD NE CZ NH1 NH2 REMARK 470 PHE B 260 CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR B 261 CB OG1 CG2 REMARK 470 ASP B 271 CG OD1 OD2 REMARK 470 VAL B 273 CG1 CG2 REMARK 470 LEU B 276 CB CG CD1 CD2 REMARK 470 GLU B 285 CG CD OE1 OE2 REMARK 470 GLN B 289 CG CD OE1 NE2 REMARK 470 ASP B 300 CB CG OD1 OD2 REMARK 470 ARG B 310 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 332 CG CD OE1 NE2 REMARK 470 LYS B 334 CG CD CE NZ REMARK 470 ARG B 337 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 369 CG OD1 OD2 REMARK 470 ARG B 376 CG CD NE CZ NH1 NH2 REMARK 470 SER B 379 OG REMARK 470 THR B 380 OG1 CG2 REMARK 470 SER B 382 CB OG REMARK 470 ASP B 398 CG OD1 OD2 REMARK 470 ARG B 403 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 405 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 411 CB CG CD CE NZ REMARK 470 LYS B 413 CG CD CE NZ REMARK 470 VAL B 415 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 300 -17.12 67.04 REMARK 500 GLN A 332 114.32 176.55 REMARK 500 PRO A 336 -83.20 -56.63 REMARK 500 ARG A 337 -96.90 -85.21 REMARK 500 LEU B 292 -168.00 -114.01 REMARK 500 ASP B 335 -161.47 -64.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 504 DBREF 4P2M A 212 443 UNP P0A4Y0 CYA1_MYCTU 212 443 DBREF 4P2M B 212 443 UNP P0A4Y0 CYA1_MYCTU 212 443 SEQADV 4P2M GLY A 210 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2M ALA A 211 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2M GLY B 210 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2M ALA B 211 UNP P0A4Y0 EXPRESSION TAG SEQRES 1 A 234 GLY ALA MET GLU ALA GLU HIS ASP ARG SER GLU ALA LEU SEQRES 2 A 234 LEU ALA ASN MET LEU PRO ALA SER ILE ALA GLU ARG LEU SEQRES 3 A 234 LYS GLU PRO GLU ARG ASN ILE ILE ALA ASP LYS TYR ASP SEQRES 4 A 234 GLU ALA SER VAL LEU PHE ALA ASP ILE VAL GLY PHE THR SEQRES 5 A 234 GLU ARG ALA SER SER THR ALA PRO ALA ASP LEU VAL ARG SEQRES 6 A 234 PHE LEU ASP ARG LEU TYR SER ALA PHE ASP GLU LEU VAL SEQRES 7 A 234 ASP GLN HIS GLY LEU GLU LYS ILE LYS VAL SER GLY ASP SEQRES 8 A 234 SER TYR MET VAL VAL SER GLY VAL PRO ARG PRO ARG PRO SEQRES 9 A 234 ASP HIS THR GLN ALA LEU ALA ASP PHE ALA LEU ASP MET SEQRES 10 A 234 THR ASN VAL ALA ALA GLN LEU LYS ASP PRO ARG GLY ASN SEQRES 11 A 234 PRO VAL PRO LEU ARG VAL GLY LEU ALA THR GLY PRO VAL SEQRES 12 A 234 VAL ALA GLY VAL VAL GLY SER ARG ARG PHE PHE TYR ASP SEQRES 13 A 234 VAL TRP GLY ASP ALA VAL ASN VAL ALA SER ARG MET GLU SEQRES 14 A 234 SER THR ASP SER VAL GLY GLN ILE GLN VAL PRO ASP GLU SEQRES 15 A 234 VAL TYR GLU ARG LEU LYS ASP ASP PHE VAL LEU ARG GLU SEQRES 16 A 234 ARG GLY HIS ILE ASN VAL LYS GLY LYS GLY VAL MET ARG SEQRES 17 A 234 THR TRP TYR LEU ILE GLY ARG LYS VAL ALA ALA ASP PRO SEQRES 18 A 234 GLY GLU VAL ARG GLY ALA GLU PRO ARG THR ALA GLY VAL SEQRES 1 B 234 GLY ALA MET GLU ALA GLU HIS ASP ARG SER GLU ALA LEU SEQRES 2 B 234 LEU ALA ASN MET LEU PRO ALA SER ILE ALA GLU ARG LEU SEQRES 3 B 234 LYS GLU PRO GLU ARG ASN ILE ILE ALA ASP LYS TYR ASP SEQRES 4 B 234 GLU ALA SER VAL LEU PHE ALA ASP ILE VAL GLY PHE THR SEQRES 5 B 234 GLU ARG ALA SER SER THR ALA PRO ALA ASP LEU VAL ARG SEQRES 6 B 234 PHE LEU ASP ARG LEU TYR SER ALA PHE ASP GLU LEU VAL SEQRES 7 B 234 ASP GLN HIS GLY LEU GLU LYS ILE LYS VAL SER GLY ASP SEQRES 8 B 234 SER TYR MET VAL VAL SER GLY VAL PRO ARG PRO ARG PRO SEQRES 9 B 234 ASP HIS THR GLN ALA LEU ALA ASP PHE ALA LEU ASP MET SEQRES 10 B 234 THR ASN VAL ALA ALA GLN LEU LYS ASP PRO ARG GLY ASN SEQRES 11 B 234 PRO VAL PRO LEU ARG VAL GLY LEU ALA THR GLY PRO VAL SEQRES 12 B 234 VAL ALA GLY VAL VAL GLY SER ARG ARG PHE PHE TYR ASP SEQRES 13 B 234 VAL TRP GLY ASP ALA VAL ASN VAL ALA SER ARG MET GLU SEQRES 14 B 234 SER THR ASP SER VAL GLY GLN ILE GLN VAL PRO ASP GLU SEQRES 15 B 234 VAL TYR GLU ARG LEU LYS ASP ASP PHE VAL LEU ARG GLU SEQRES 16 B 234 ARG GLY HIS ILE ASN VAL LYS GLY LYS GLY VAL MET ARG SEQRES 17 B 234 THR TRP TYR LEU ILE GLY ARG LYS VAL ALA ALA ASP PRO SEQRES 18 B 234 GLY GLU VAL ARG GLY ALA GLU PRO ARG THR ALA GLY VAL HET SO4 A 501 5 HET SO4 A 502 5 HET PEG A 503 7 HET PEG A 504 7 HET PEG A 505 7 HET PEG A 506 7 HET PEG A 507 7 HET PEG B 501 7 HET PEG B 502 7 HET PEG B 503 7 HET PEG B 504 7 HETNAM SO4 SULFATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 PEG 9(C4 H10 O3) FORMUL 14 HOH *65(H2 O) HELIX 1 AA1 ARG A 274 HIS A 290 1 17 HELIX 2 AA2 ASP A 314 ALA A 331 1 18 HELIX 3 AA3 GLY A 368 THR A 380 1 13 HELIX 4 AA4 PRO A 389 LYS A 397 1 9 HELIX 5 AA5 VAL B 273 HIS B 290 1 18 HELIX 6 AA6 ASP B 314 LEU B 333 1 20 HELIX 7 AA7 GLY B 368 THR B 380 1 13 HELIX 8 AA8 ASP B 390 LYS B 397 1 8 SHEET 1 AA1 8 GLU A 293 LYS A 294 0 SHEET 2 AA1 8 TYR A 302 SER A 306 -1 O VAL A 305 N GLU A 293 SHEET 3 AA1 8 ILE A 242 ASP A 256 -1 N ALA A 255 O TYR A 302 SHEET 4 AA1 8 ARG A 344 TRP A 367 -1 O ALA A 348 N VAL A 252 SHEET 5 AA1 8 LEU B 343 TRP B 367 -1 O ASP B 365 N GLY A 355 SHEET 6 AA1 8 ILE B 242 ILE B 257 -1 N TYR B 247 O VAL B 352 SHEET 7 AA1 8 TYR B 302 SER B 306 -1 O VAL B 304 N LEU B 253 SHEET 8 AA1 8 GLU B 293 ILE B 295 -1 N ILE B 295 O MET B 303 SHEET 1 AA2 8 PHE A 400 ASN A 409 0 SHEET 2 AA2 8 VAL A 415 ARG A 424 -1 O TYR A 420 N ARG A 403 SHEET 3 AA2 8 ILE A 386 VAL A 388 -1 N VAL A 388 O TRP A 419 SHEET 4 AA2 8 LEU B 343 TRP B 367 1 O VAL B 345 N GLN A 387 SHEET 5 AA2 8 ARG A 344 TRP A 367 -1 N GLY A 355 O ASP B 365 SHEET 6 AA2 8 ILE B 386 PRO B 389 1 O GLN B 387 N LEU A 347 SHEET 7 AA2 8 MET B 416 ARG B 424 -1 O TRP B 419 N VAL B 388 SHEET 8 AA2 8 PHE B 400 ILE B 408 -1 N ARG B 403 O TYR B 420 CISPEP 1 ILE A 257 VAL A 258 0 3.21 CISPEP 2 VAL A 308 PRO A 309 0 -0.31 CISPEP 3 GLN A 332 LEU A 333 0 0.08 CISPEP 4 VAL B 308 PRO B 309 0 1.38 CISPEP 5 GLY B 412 LYS B 413 0 -11.65 SITE 1 AC1 4 ARG A 274 ARG A 278 ARG B 274 ARG B 278 SITE 1 AC2 6 ARG A 405 HOH A 602 HOH A 607 HOH A 610 SITE 2 AC2 6 LYS B 411 VAL B 426 SITE 1 AC3 3 VAL B 356 PHE B 362 PEG B 504 SITE 1 AC4 4 GLU A 391 ARG A 395 THR B 349 GLY B 350 SITE 1 AC5 1 ARG A 417 SITE 1 AC6 6 LYS A 246 ASP A 248 PRO A 351 VAL A 353 SITE 2 AC6 6 GLY B 368 ASP B 369 SITE 1 AC7 5 HIS A 290 ARG A 312 ASP A 314 ALA A 318 SITE 2 AC7 5 ASP A 321 SITE 1 AC8 3 ASP B 314 ALA B 318 ASP B 321 SITE 1 AC9 6 ASP B 284 VAL B 287 ASP B 288 LEU B 292 SITE 2 AC9 6 GLU B 293 LYS B 294 SITE 1 AD1 5 LYS B 246 TYR B 247 ASP B 248 PRO B 351 SITE 2 AD1 5 VAL B 352 SITE 1 AD2 3 PEG A 503 ARG B 360 PHE B 362 CRYST1 74.570 74.570 133.740 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013410 0.007742 0.000000 0.00000 SCALE2 0.000000 0.015485 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007477 0.00000 MASTER 502 0 11 8 16 0 16 6 0 0 0 36 END