HEADER TRANSFERASE 04-FEB-14 4OWU TITLE ANTHRANILATE PHOSPHORIBOSYL TRANSFERASE FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS IN COMPLEX WITH 5-METHYLANTHRANILATE, PRPP AND MAGNESIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.4.2.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: MT2248,MTCY190.03C,RV2192C,TRPD; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET23A KEYWDS ANTHRANILIC ACIDS, MAGNESIUM, TRYPTOPHAN, INHIBITOR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.CASTELL,T.V.M.COOKSON,F.L.SHORT,J.S.LOTT REVDAT 6 29-JUL-20 4OWU 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE REVDAT 5 07-MAR-18 4OWU 1 REMARK REVDAT 4 27-SEP-17 4OWU 1 SOURCE JRNL REMARK REVDAT 3 17-DEC-14 4OWU 1 REMARK REVDAT 2 01-OCT-14 4OWU 1 JRNL REVDAT 1 23-APR-14 4OWU 0 JRNL AUTH T.V.COOKSON,A.CASTELL,E.M.BULLOCH,G.L.EVANS,F.L.SHORT, JRNL AUTH 2 E.N.BAKER,J.S.LOTT,E.J.PARKER JRNL TITL ALTERNATIVE SUBSTRATES REVEAL CATALYTIC CYCLE AND KEY JRNL TITL 2 BINDING EVENTS IN THE REACTION CATALYSED BY ANTHRANILATE JRNL TITL 3 PHOSPHORIBOSYLTRANSFERASE FROM MYCOBACTERIUM TUBERCULOSIS. JRNL REF BIOCHEM.J. V. 461 87 2014 JRNL REFN ESSN 1470-8728 JRNL PMID 24712732 JRNL DOI 10.1042/BJ20140209 REMARK 2 REMARK 2 RESOLUTION. 1.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 71392 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3621 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.89 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.94 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4934 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE SET COUNT : 266 REMARK 3 BIN FREE R VALUE : 0.2660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4989 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 98 REMARK 3 SOLVENT ATOMS : 516 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.23000 REMARK 3 B22 (A**2) : 1.67000 REMARK 3 B33 (A**2) : -0.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.111 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.108 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.555 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5176 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4959 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7071 ; 1.475 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11288 ; 0.789 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 693 ; 5.651 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 197 ;34.218 ;22.589 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 708 ;12.513 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;18.356 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 824 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6005 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1183 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 420 REMARK 3 ORIGIN FOR THE GROUP (A): -20.9527 -21.0368 9.2388 REMARK 3 T TENSOR REMARK 3 T11: 0.0114 T22: 0.0254 REMARK 3 T33: 0.0036 T12: 0.0111 REMARK 3 T13: -0.0018 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.8648 L22: 0.2360 REMARK 3 L33: 0.7635 L12: -0.2179 REMARK 3 L13: 0.6319 L23: -0.2869 REMARK 3 S TENSOR REMARK 3 S11: -0.0477 S12: -0.1390 S13: 0.0129 REMARK 3 S21: 0.0085 S22: 0.0310 S23: 0.0063 REMARK 3 S31: -0.0015 S32: -0.0996 S33: 0.0166 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 420 REMARK 3 ORIGIN FOR THE GROUP (A): 7.7407 -24.0675 51.2058 REMARK 3 T TENSOR REMARK 3 T11: 0.0211 T22: 0.0091 REMARK 3 T33: 0.0124 T12: 0.0072 REMARK 3 T13: -0.0012 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 1.0176 L22: 0.1762 REMARK 3 L33: 0.6003 L12: -0.2202 REMARK 3 L13: 0.5309 L23: -0.0387 REMARK 3 S TENSOR REMARK 3 S11: -0.0227 S12: 0.0719 S13: 0.0703 REMARK 3 S21: -0.0071 S22: -0.0199 S23: -0.0414 REMARK 3 S31: -0.0741 S32: 0.0061 S33: 0.0426 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 4OWU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000200160. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.95369 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71474 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.890 REMARK 200 RESOLUTION RANGE LOW (A) : 120.801 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06500 REMARK 200 FOR THE DATA SET : 20.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.48500 REMARK 200 R SYM FOR SHELL (I) : 0.48500 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: IMIDAZOLE/MALATE, PEG 4000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.74300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.40050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.89600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.40050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.74300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.89600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 GLY A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 GLY A 10 REMARK 465 GLY A 11 REMARK 465 SER A 12 REMARK 465 ARG A 13 REMARK 465 GLY A 14 REMARK 465 GLY A 15 REMARK 465 SER A 16 REMARK 465 PRO A 17 REMARK 465 LYS A 18 REMARK 465 ALA A 19 REMARK 465 GLU A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 SER A 23 REMARK 465 LEU A 371 REMARK 465 GLU A 372 REMARK 465 HIS A 373 REMARK 465 HIS A 374 REMARK 465 HIS A 375 REMARK 465 HIS A 376 REMARK 465 HIS A 377 REMARK 465 HIS A 378 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LEU B 3 REMARK 465 SER B 4 REMARK 465 ALA B 5 REMARK 465 GLU B 6 REMARK 465 GLY B 7 REMARK 465 SER B 8 REMARK 465 SER B 9 REMARK 465 GLY B 10 REMARK 465 GLY B 11 REMARK 465 SER B 12 REMARK 465 ARG B 13 REMARK 465 GLY B 14 REMARK 465 GLY B 15 REMARK 465 SER B 16 REMARK 465 PRO B 17 REMARK 465 LYS B 18 REMARK 465 ALA B 19 REMARK 465 GLU B 20 REMARK 465 ALA B 21 REMARK 465 ALA B 22 REMARK 465 SER B 23 REMARK 465 GLU B 372 REMARK 465 HIS B 373 REMARK 465 HIS B 374 REMARK 465 HIS B 375 REMARK 465 HIS B 376 REMARK 465 HIS B 377 REMARK 465 HIS B 378 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 24 CG1 CG2 REMARK 470 ARG A 238 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 333 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 369 CG CD OE1 NE2 REMARK 470 VAL B 24 CG1 CG2 REMARK 470 ARG B 42 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 144 CG CD1 CD2 REMARK 470 GLN B 295 CD OE1 NE2 REMARK 470 SER B 332 OG REMARK 470 ARG B 333 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 335 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY B 307 NH1 ARG B 309 2.10 REMARK 500 NH2 ARG B 362 O HOH B 728 2.17 REMARK 500 O VAL B 113 O HOH B 734 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 73 103.20 95.19 REMARK 500 ASN A 114 78.02 48.40 REMARK 500 ASP A 159 30.26 -99.21 REMARK 500 ASP A 251 46.04 -85.31 REMARK 500 THR A 257 -163.63 -167.71 REMARK 500 ALA B 73 105.25 106.78 REMARK 500 VAL B 106 148.23 -170.18 REMARK 500 ASP B 159 57.05 -102.41 REMARK 500 ASP B 251 44.36 -86.91 REMARK 500 THR B 257 -160.98 -168.78 REMARK 500 SER B 331 64.95 -108.72 REMARK 500 ALA B 334 77.00 -109.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 119 OG REMARK 620 2 GLU A 252 OE2 91.4 REMARK 620 3 PRP A 403 O2A 95.0 173.4 REMARK 620 4 PRP A 403 O2B 92.3 88.0 90.2 REMARK 620 5 HOH A 670 O 176.5 87.4 86.3 91.0 REMARK 620 6 HOH A 723 O 81.8 84.6 97.9 170.3 94.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 251 OD1 REMARK 620 2 GLU A 252 OE2 98.4 REMARK 620 3 HOH A 670 O 85.2 74.3 REMARK 620 4 HOH A 736 O 168.2 78.2 104.5 REMARK 620 5 HOH A 738 O 91.3 114.3 171.2 80.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 119 OG REMARK 620 2 GLU B 252 OE2 92.9 REMARK 620 3 PRP B 403 O1A 96.4 170.6 REMARK 620 4 PRP B 403 O3B 92.2 90.2 91.3 REMARK 620 5 HOH B 603 O 175.1 84.0 86.7 91.6 REMARK 620 6 HOH B 610 O 80.7 81.9 97.7 169.1 95.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 251 OD1 REMARK 620 2 GLU B 252 OE2 98.6 REMARK 620 3 HOH B 603 O 84.3 74.2 REMARK 620 4 HOH B 657 O 169.8 75.5 101.6 REMARK 620 5 HOH B 738 O 89.3 119.3 166.0 86.6 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OWM RELATED DB: PDB REMARK 900 RELATED ID: 4OWN RELATED DB: PDB REMARK 900 RELATED ID: 4OWO RELATED DB: PDB REMARK 900 RELATED ID: 4OWQ RELATED DB: PDB REMARK 900 RELATED ID: 4OWS RELATED DB: PDB REMARK 900 RELATED ID: 4OWV RELATED DB: PDB DBREF 4OWU A 1 370 UNP P66992 TRPD_MYCTU 1 370 DBREF 4OWU B 1 370 UNP P66992 TRPD_MYCTU 1 370 SEQADV 4OWU LEU A 371 UNP P66992 EXPRESSION TAG SEQADV 4OWU GLU A 372 UNP P66992 EXPRESSION TAG SEQADV 4OWU HIS A 373 UNP P66992 EXPRESSION TAG SEQADV 4OWU HIS A 374 UNP P66992 EXPRESSION TAG SEQADV 4OWU HIS A 375 UNP P66992 EXPRESSION TAG SEQADV 4OWU HIS A 376 UNP P66992 EXPRESSION TAG SEQADV 4OWU HIS A 377 UNP P66992 EXPRESSION TAG SEQADV 4OWU HIS A 378 UNP P66992 EXPRESSION TAG SEQADV 4OWU LEU B 371 UNP P66992 EXPRESSION TAG SEQADV 4OWU GLU B 372 UNP P66992 EXPRESSION TAG SEQADV 4OWU HIS B 373 UNP P66992 EXPRESSION TAG SEQADV 4OWU HIS B 374 UNP P66992 EXPRESSION TAG SEQADV 4OWU HIS B 375 UNP P66992 EXPRESSION TAG SEQADV 4OWU HIS B 376 UNP P66992 EXPRESSION TAG SEQADV 4OWU HIS B 377 UNP P66992 EXPRESSION TAG SEQADV 4OWU HIS B 378 UNP P66992 EXPRESSION TAG SEQRES 1 A 378 MET ALA LEU SER ALA GLU GLY SER SER GLY GLY SER ARG SEQRES 2 A 378 GLY GLY SER PRO LYS ALA GLU ALA ALA SER VAL PRO SER SEQRES 3 A 378 TRP PRO GLN ILE LEU GLY ARG LEU THR ASP ASN ARG ASP SEQRES 4 A 378 LEU ALA ARG GLY GLN ALA ALA TRP ALA MET ASP GLN ILE SEQRES 5 A 378 MET THR GLY ASN ALA ARG PRO ALA GLN ILE ALA ALA PHE SEQRES 6 A 378 ALA VAL ALA MET THR MET LYS ALA PRO THR ALA ASP GLU SEQRES 7 A 378 VAL GLY GLU LEU ALA GLY VAL MET LEU SER HIS ALA HIS SEQRES 8 A 378 PRO LEU PRO ALA ASP THR VAL PRO ASP ASP ALA VAL ASP SEQRES 9 A 378 VAL VAL GLY THR GLY GLY ASP GLY VAL ASN THR VAL ASN SEQRES 10 A 378 LEU SER THR MET ALA ALA ILE VAL VAL ALA ALA ALA GLY SEQRES 11 A 378 VAL PRO VAL VAL LYS HIS GLY ASN ARG ALA ALA SER SER SEQRES 12 A 378 LEU SER GLY GLY ALA ASP THR LEU GLU ALA LEU GLY VAL SEQRES 13 A 378 ARG ILE ASP LEU GLY PRO ASP LEU VAL ALA ARG SER LEU SEQRES 14 A 378 ALA GLU VAL GLY ILE GLY PHE CYS PHE ALA PRO ARG PHE SEQRES 15 A 378 HIS PRO SER TYR ARG HIS ALA ALA ALA VAL ARG ARG GLU SEQRES 16 A 378 ILE GLY VAL PRO THR VAL PHE ASN LEU LEU GLY PRO LEU SEQRES 17 A 378 THR ASN PRO ALA ARG PRO ARG ALA GLY LEU ILE GLY CYS SEQRES 18 A 378 ALA PHE ALA ASP LEU ALA GLU VAL MET ALA GLY VAL PHE SEQRES 19 A 378 ALA ALA ARG ARG SER SER VAL LEU VAL VAL HIS GLY ASP SEQRES 20 A 378 ASP GLY LEU ASP GLU LEU THR THR THR THR THR SER THR SEQRES 21 A 378 ILE TRP ARG VAL ALA ALA GLY SER VAL ASP LYS LEU THR SEQRES 22 A 378 PHE ASP PRO ALA GLY PHE GLY PHE ALA ARG ALA GLN LEU SEQRES 23 A 378 ASP GLN LEU ALA GLY GLY ASP ALA GLN ALA ASN ALA ALA SEQRES 24 A 378 ALA VAL ARG ALA VAL LEU GLY GLY ALA ARG GLY PRO VAL SEQRES 25 A 378 ARG ASP ALA VAL VAL LEU ASN ALA ALA GLY ALA ILE VAL SEQRES 26 A 378 ALA HIS ALA GLY LEU SER SER ARG ALA GLU TRP LEU PRO SEQRES 27 A 378 ALA TRP GLU GLU GLY LEU ARG ARG ALA SER ALA ALA ILE SEQRES 28 A 378 ASP THR GLY ALA ALA GLU GLN LEU LEU ALA ARG TRP VAL SEQRES 29 A 378 ARG PHE GLY ARG GLN ILE LEU GLU HIS HIS HIS HIS HIS SEQRES 30 A 378 HIS SEQRES 1 B 378 MET ALA LEU SER ALA GLU GLY SER SER GLY GLY SER ARG SEQRES 2 B 378 GLY GLY SER PRO LYS ALA GLU ALA ALA SER VAL PRO SER SEQRES 3 B 378 TRP PRO GLN ILE LEU GLY ARG LEU THR ASP ASN ARG ASP SEQRES 4 B 378 LEU ALA ARG GLY GLN ALA ALA TRP ALA MET ASP GLN ILE SEQRES 5 B 378 MET THR GLY ASN ALA ARG PRO ALA GLN ILE ALA ALA PHE SEQRES 6 B 378 ALA VAL ALA MET THR MET LYS ALA PRO THR ALA ASP GLU SEQRES 7 B 378 VAL GLY GLU LEU ALA GLY VAL MET LEU SER HIS ALA HIS SEQRES 8 B 378 PRO LEU PRO ALA ASP THR VAL PRO ASP ASP ALA VAL ASP SEQRES 9 B 378 VAL VAL GLY THR GLY GLY ASP GLY VAL ASN THR VAL ASN SEQRES 10 B 378 LEU SER THR MET ALA ALA ILE VAL VAL ALA ALA ALA GLY SEQRES 11 B 378 VAL PRO VAL VAL LYS HIS GLY ASN ARG ALA ALA SER SER SEQRES 12 B 378 LEU SER GLY GLY ALA ASP THR LEU GLU ALA LEU GLY VAL SEQRES 13 B 378 ARG ILE ASP LEU GLY PRO ASP LEU VAL ALA ARG SER LEU SEQRES 14 B 378 ALA GLU VAL GLY ILE GLY PHE CYS PHE ALA PRO ARG PHE SEQRES 15 B 378 HIS PRO SER TYR ARG HIS ALA ALA ALA VAL ARG ARG GLU SEQRES 16 B 378 ILE GLY VAL PRO THR VAL PHE ASN LEU LEU GLY PRO LEU SEQRES 17 B 378 THR ASN PRO ALA ARG PRO ARG ALA GLY LEU ILE GLY CYS SEQRES 18 B 378 ALA PHE ALA ASP LEU ALA GLU VAL MET ALA GLY VAL PHE SEQRES 19 B 378 ALA ALA ARG ARG SER SER VAL LEU VAL VAL HIS GLY ASP SEQRES 20 B 378 ASP GLY LEU ASP GLU LEU THR THR THR THR THR SER THR SEQRES 21 B 378 ILE TRP ARG VAL ALA ALA GLY SER VAL ASP LYS LEU THR SEQRES 22 B 378 PHE ASP PRO ALA GLY PHE GLY PHE ALA ARG ALA GLN LEU SEQRES 23 B 378 ASP GLN LEU ALA GLY GLY ASP ALA GLN ALA ASN ALA ALA SEQRES 24 B 378 ALA VAL ARG ALA VAL LEU GLY GLY ALA ARG GLY PRO VAL SEQRES 25 B 378 ARG ASP ALA VAL VAL LEU ASN ALA ALA GLY ALA ILE VAL SEQRES 26 B 378 ALA HIS ALA GLY LEU SER SER ARG ALA GLU TRP LEU PRO SEQRES 27 B 378 ALA TRP GLU GLU GLY LEU ARG ARG ALA SER ALA ALA ILE SEQRES 28 B 378 ASP THR GLY ALA ALA GLU GLN LEU LEU ALA ARG TRP VAL SEQRES 29 B 378 ARG PHE GLY ARG GLN ILE LEU GLU HIS HIS HIS HIS HIS SEQRES 30 B 378 HIS HET MG A 401 1 HET MG A 402 1 HET PRP A 403 22 HET 5M0 A 404 11 HET GOL A 405 6 HET IMD A 406 5 HET GOL A 407 6 HET MG B 401 1 HET MG B 402 1 HET PRP B 403 22 HET 5M0 B 404 11 HET GOL B 405 6 HET IMD B 406 5 HETNAM MG MAGNESIUM ION HETNAM PRP 1-O-PYROPHOSPHONO-5-O-PHOSPHONO-ALPHA-D-RIBOFURANOSE HETNAM 5M0 2-AZANYL-5-METHYL-BENZOIC ACID HETNAM GOL GLYCEROL HETNAM IMD IMIDAZOLE HETSYN 5M0 5-METHYLANTHRANILATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 MG 4(MG 2+) FORMUL 5 PRP 2(C5 H13 O14 P3) FORMUL 6 5M0 2(C8 H9 N O2) FORMUL 7 GOL 3(C3 H8 O3) FORMUL 8 IMD 2(C3 H5 N2 1+) FORMUL 16 HOH *516(H2 O) HELIX 1 AA1 SER A 26 ASP A 36 1 11 HELIX 2 AA2 GLY A 43 THR A 54 1 12 HELIX 3 AA3 ARG A 58 ALA A 73 1 16 HELIX 4 AA4 THR A 75 HIS A 89 1 15 HELIX 5 AA5 ASN A 117 ALA A 129 1 13 HELIX 6 AA6 GLY A 146 LEU A 154 1 9 HELIX 7 AA7 GLY A 161 GLY A 173 1 13 HELIX 8 AA8 ALA A 179 HIS A 183 1 5 HELIX 9 AA9 TYR A 186 GLY A 197 1 12 HELIX 10 AB1 THR A 200 ASN A 203 5 4 HELIX 11 AB2 LEU A 204 THR A 209 1 6 HELIX 12 AB3 LEU A 226 ALA A 236 1 11 HELIX 13 AB4 ASP A 275 GLY A 280 5 6 HELIX 14 AB5 GLN A 285 ALA A 290 5 6 HELIX 15 AB6 ASP A 293 GLY A 306 1 14 HELIX 16 AB7 GLY A 310 GLY A 329 1 20 HELIX 17 AB8 GLU A 335 THR A 353 1 19 HELIX 18 AB9 GLY A 354 GLN A 369 1 16 HELIX 19 AC1 SER B 26 ASP B 36 1 11 HELIX 20 AC2 GLY B 43 THR B 54 1 12 HELIX 21 AC3 ARG B 58 ALA B 73 1 16 HELIX 22 AC4 THR B 75 HIS B 89 1 15 HELIX 23 AC5 ASN B 117 ALA B 129 1 13 HELIX 24 AC6 GLY B 146 LEU B 154 1 9 HELIX 25 AC7 GLY B 161 GLY B 173 1 13 HELIX 26 AC8 ALA B 179 HIS B 183 1 5 HELIX 27 AC9 TYR B 186 GLY B 197 1 12 HELIX 28 AD1 THR B 200 ASN B 203 5 4 HELIX 29 AD2 LEU B 204 THR B 209 1 6 HELIX 30 AD3 PHE B 223 ASP B 225 5 3 HELIX 31 AD4 LEU B 226 ARG B 237 1 12 HELIX 32 AD5 ASP B 275 GLY B 280 5 6 HELIX 33 AD6 GLN B 285 ALA B 290 5 6 HELIX 34 AD7 ASP B 293 GLY B 306 1 14 HELIX 35 AD8 GLY B 310 GLY B 329 1 20 HELIX 36 AD9 LEU B 330 SER B 332 5 3 HELIX 37 AE1 GLU B 335 THR B 353 1 19 HELIX 38 AE2 GLY B 354 ILE B 370 1 17 SHEET 1 AA1 5 VAL A 103 GLY A 107 0 SHEET 2 AA1 5 ALA A 216 GLY A 220 1 O LEU A 218 N ASP A 104 SHEET 3 AA1 5 SER A 240 GLY A 246 1 O LEU A 242 N ILE A 219 SHEET 4 AA1 5 SER A 259 ALA A 265 -1 O VAL A 264 N VAL A 241 SHEET 5 AA1 5 SER A 268 PHE A 274 -1 O PHE A 274 N SER A 259 SHEET 1 AA2 2 VAL A 133 GLY A 137 0 SHEET 2 AA2 2 ILE A 174 PHE A 178 1 O CYS A 177 N LYS A 135 SHEET 1 AA3 5 VAL B 103 GLY B 107 0 SHEET 2 AA3 5 ALA B 216 GLY B 220 1 O LEU B 218 N ASP B 104 SHEET 3 AA3 5 SER B 240 GLY B 246 1 O LEU B 242 N ILE B 219 SHEET 4 AA3 5 SER B 259 ALA B 265 -1 O THR B 260 N HIS B 245 SHEET 5 AA3 5 SER B 268 PHE B 274 -1 O PHE B 274 N SER B 259 SHEET 1 AA4 2 VAL B 133 GLY B 137 0 SHEET 2 AA4 2 ILE B 174 PHE B 178 1 O CYS B 177 N LYS B 135 LINK OG SER A 119 MG MG A 402 1555 1555 2.06 LINK OD1 ASP A 251 MG MG A 401 1555 1555 2.37 LINK OE2 GLU A 252 MG MG A 401 1555 1555 2.27 LINK OE2 GLU A 252 MG MG A 402 1555 1555 2.08 LINK MG MG A 401 O HOH A 670 1555 1555 2.54 LINK MG MG A 401 O HOH A 736 1555 1555 2.30 LINK MG MG A 401 O HOH A 738 1555 1555 2.31 LINK MG MG A 402 O2A PRP A 403 1555 1555 1.95 LINK MG MG A 402 O2B PRP A 403 1555 1555 2.02 LINK MG MG A 402 O HOH A 670 1555 1555 2.13 LINK MG MG A 402 O HOH A 723 1555 1555 2.00 LINK OG SER B 119 MG MG B 401 1555 1555 2.04 LINK OD1 ASP B 251 MG MG B 402 1555 1555 2.35 LINK OE2 GLU B 252 MG MG B 401 1555 1555 2.13 LINK OE2 GLU B 252 MG MG B 402 1555 1555 2.27 LINK MG MG B 401 O1A PRP B 403 1555 1555 1.98 LINK MG MG B 401 O3B PRP B 403 1555 1555 1.98 LINK MG MG B 401 O HOH B 603 1555 1555 2.13 LINK MG MG B 401 O HOH B 610 1555 1555 2.16 LINK MG MG B 402 O HOH B 603 1555 1555 2.46 LINK MG MG B 402 O HOH B 657 1555 1555 2.54 LINK MG MG B 402 O HOH B 738 1555 1555 2.37 CRYST1 79.486 91.792 120.801 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012581 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010894 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008278 0.00000 MASTER 456 0 13 38 14 0 0 6 0 0 0 60 END