HEADER ISOMERASE, CHAPERONE 10-JAN-14 4ODL TITLE STRUCTURE OF SLYD FROM THERMUS THERMOPHILUS IN COMPLEX WITH S2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE SLYD; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TTSLYD; COMPND 5 EC: 5.2.1.8; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 30S RIBOSOMAL PROTEIN S2; COMPND 9 CHAIN: C, D, E, F; COMPND 10 FRAGMENT: S2 PEPTIDE (UNP RESIDUES 20-34); COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 GENE: TTHA0346; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 10 ORGANISM_TAXID: 83333 KEYWDS FKBP DOMAIN, IF DOMAIN, CHAPERONE, PEPTIDYL-PROLYL ISOMERASE, PPIASE, KEYWDS 2 ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.M.QUISTGAARD,C.LOW,P.NORDLUND REVDAT 2 04-OCT-17 4ODL 1 JRNL REVDAT 1 14-JAN-15 4ODL 0 JRNL AUTH E.M.QUISTGAARD,U.WEININGER,Y.URAL-BLIMKE,K.MODIG,P.NORDLUND, JRNL AUTH 2 M.AKKE,C.LOW JRNL TITL MOLECULAR INSIGHTS INTO SUBSTRATE RECOGNITION AND CATALYTIC JRNL TITL 2 MECHANISM OF THE CHAPERONE AND FKBP PEPTIDYL-PROLYL JRNL TITL 3 ISOMERASE SLYD. JRNL REF BMC BIOL. V. 14 82 2016 JRNL REFN ESSN 1741-7007 JRNL PMID 27664121 JRNL DOI 10.1186/S12915-016-0300-3 REMARK 2 REMARK 2 RESOLUTION. 2.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 14954 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 753 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0189 - 4.9855 0.99 3041 158 0.2036 0.1936 REMARK 3 2 4.9855 - 3.9577 1.00 2849 155 0.1828 0.2080 REMARK 3 3 3.9577 - 3.4576 0.98 2795 125 0.2312 0.2999 REMARK 3 4 3.4576 - 3.1415 0.99 2773 146 0.2379 0.2280 REMARK 3 5 3.1415 - 2.9160 0.99 2743 169 0.2660 0.3042 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 84.82 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2859 REMARK 3 ANGLE : 0.759 3886 REMARK 3 CHIRALITY : 0.051 409 REMARK 3 PLANARITY : 0.004 525 REMARK 3 DIHEDRAL : 13.228 1054 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESSEQ 1:150) REMARK 3 ORIGIN FOR THE GROUP (A): 40.8883 -41.4871 53.8650 REMARK 3 T TENSOR REMARK 3 T11: 0.2623 T22: 0.6907 REMARK 3 T33: 0.3227 T12: -0.0824 REMARK 3 T13: 0.0017 T23: -0.0662 REMARK 3 L TENSOR REMARK 3 L11: 3.6046 L22: 1.2452 REMARK 3 L33: 2.2401 L12: 0.4612 REMARK 3 L13: 1.9363 L23: -0.2610 REMARK 3 S TENSOR REMARK 3 S11: -0.0477 S12: -0.4446 S13: 0.2214 REMARK 3 S21: 0.2182 S22: -0.0100 S23: -0.2521 REMARK 3 S31: -0.2125 S32: 0.2168 S33: 0.0307 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESSEQ 1:150) REMARK 3 ORIGIN FOR THE GROUP (A): 59.2681 -14.8639 -23.4730 REMARK 3 T TENSOR REMARK 3 T11: 0.9462 T22: 0.2615 REMARK 3 T33: 0.4622 T12: 0.1383 REMARK 3 T13: -0.0349 T23: -0.0431 REMARK 3 L TENSOR REMARK 3 L11: 2.1352 L22: 2.8334 REMARK 3 L33: 1.8368 L12: -2.0951 REMARK 3 L13: -1.0147 L23: 1.4783 REMARK 3 S TENSOR REMARK 3 S11: 0.3622 S12: 0.3458 S13: -0.5012 REMARK 3 S21: -0.7677 S22: -0.4254 S23: 0.2880 REMARK 3 S31: 0.5611 S32: -0.1285 S33: 0.1682 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'C' AND RESSEQ 26:35) REMARK 3 ORIGIN FOR THE GROUP (A): 84.7084 -18.3854 -23.1200 REMARK 3 T TENSOR REMARK 3 T11: 0.5330 T22: 1.1458 REMARK 3 T33: 0.6298 T12: 0.0723 REMARK 3 T13: 0.1413 T23: -0.2791 REMARK 3 L TENSOR REMARK 3 L11: 0.0382 L22: 2.0696 REMARK 3 L33: 0.1082 L12: -0.0681 REMARK 3 L13: -0.0412 L23: 0.4400 REMARK 3 S TENSOR REMARK 3 S11: 0.4635 S12: 0.4470 S13: -0.2409 REMARK 3 S21: 0.1208 S22: 0.2184 S23: -0.5974 REMARK 3 S31: 0.2793 S32: 0.6173 S33: 0.0099 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'D' AND RESSEQ 20:35) REMARK 3 ORIGIN FOR THE GROUP (A): 55.0623 -57.8751 53.3148 REMARK 3 T TENSOR REMARK 3 T11: 0.5989 T22: 0.7109 REMARK 3 T33: 0.3392 T12: 0.0576 REMARK 3 T13: -0.1560 T23: -0.0733 REMARK 3 L TENSOR REMARK 3 L11: 3.8476 L22: 3.3391 REMARK 3 L33: 2.1307 L12: -0.1926 REMARK 3 L13: -2.0724 L23: 1.9343 REMARK 3 S TENSOR REMARK 3 S11: 0.0030 S12: -0.4608 S13: 0.4157 REMARK 3 S21: 0.0316 S22: -0.0682 S23: 0.7153 REMARK 3 S31: 1.6001 S32: -0.1618 S33: -0.0370 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN 'E' AND RESSEQ 20:35) REMARK 3 ORIGIN FOR THE GROUP (A): 63.6281 -9.6285 -23.5784 REMARK 3 T TENSOR REMARK 3 T11: 1.0389 T22: 0.3877 REMARK 3 T33: 0.4864 T12: 0.5007 REMARK 3 T13: 0.2223 T23: -0.2259 REMARK 3 L TENSOR REMARK 3 L11: 1.5479 L22: 0.1165 REMARK 3 L33: 1.3184 L12: 0.0298 REMARK 3 L13: -0.4718 L23: 0.3579 REMARK 3 S TENSOR REMARK 3 S11: 0.0519 S12: 0.1986 S13: -0.1089 REMARK 3 S21: -0.3185 S22: 0.1866 S23: -0.6053 REMARK 3 S31: -0.0719 S32: 0.2551 S33: -0.2016 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN 'F' AND RESSEQ 20:35) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9790 -47.5456 54.1295 REMARK 3 T TENSOR REMARK 3 T11: 0.3060 T22: 1.0438 REMARK 3 T33: 0.6369 T12: 0.0128 REMARK 3 T13: -0.0380 T23: -0.1392 REMARK 3 L TENSOR REMARK 3 L11: 0.6236 L22: 3.2664 REMARK 3 L33: 4.7463 L12: -0.7673 REMARK 3 L13: 1.2078 L23: -2.3522 REMARK 3 S TENSOR REMARK 3 S11: 0.1615 S12: -0.2550 S13: -0.5171 REMARK 3 S21: -0.1295 S22: -0.2035 S23: -0.5470 REMARK 3 S31: 0.7472 S32: 0.3141 S33: -0.0648 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: PDB ENTRY 3LUO REMARK 4 REMARK 4 4ODL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000084358. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-SEP-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14963 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.916 REMARK 200 RESOLUTION RANGE LOW (A) : 48.012 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04700 REMARK 200 FOR THE DATA SET : 30.6800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 8.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.67900 REMARK 200 FOR SHELL : 3.270 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.1 M BIS-TRIS, PH 5.5, REMARK 280 0.2 M AMMONIUM SULFATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 121.54000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 60.77000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 121.54000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 60.77000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 121.54000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 60.77000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 121.54000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 60.77000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 151 REMARK 465 GLY A 152 REMARK 465 HIS A 153 REMARK 465 HIS A 154 REMARK 465 HIS A 155 REMARK 465 HIS A 156 REMARK 465 HIS A 157 REMARK 465 HIS A 158 REMARK 465 SER B 151 REMARK 465 GLY B 152 REMARK 465 HIS B 153 REMARK 465 HIS B 154 REMARK 465 HIS B 155 REMARK 465 HIS B 156 REMARK 465 HIS B 157 REMARK 465 HIS B 158 REMARK 465 THR C 20 REMARK 465 ARG C 21 REMARK 465 TYR C 22 REMARK 465 TRP C 23 REMARK 465 ASN C 24 REMARK 465 PRO C 25 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 62 -95.60 -109.83 REMARK 500 ASP A 95 -159.27 -140.42 REMARK 500 VAL A 106 -61.21 -90.99 REMARK 500 ALA B 62 -94.25 -111.27 REMARK 500 LYS C 28 110.61 76.88 REMARK 500 PHE C 30 -130.27 56.52 REMARK 500 ASN D 24 85.28 58.88 REMARK 500 MET D 27 -124.49 -123.98 REMARK 500 LYS D 28 74.78 -152.58 REMARK 500 ARG E 21 114.20 -162.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ODK RELATED DB: PDB REMARK 900 RELATED ID: 4ODM RELATED DB: PDB REMARK 900 RELATED ID: 4ODN RELATED DB: PDB REMARK 900 RELATED ID: 4ODO RELATED DB: PDB REMARK 900 RELATED ID: 4ODP RELATED DB: PDB REMARK 900 RELATED ID: 4ODQ RELATED DB: PDB REMARK 900 RELATED ID: 4ODR RELATED DB: PDB DBREF 4ODL A 1 149 UNP Q5SLE7 Q5SLE7_THET8 1 149 DBREF 4ODL B 1 149 UNP Q5SLE7 Q5SLE7_THET8 1 149 DBREF 4ODL C 20 34 UNP P0A7V0 RS2_ECOLI 20 34 DBREF 4ODL D 20 34 UNP P0A7V0 RS2_ECOLI 20 34 DBREF 4ODL E 20 34 UNP P0A7V0 RS2_ECOLI 20 34 DBREF 4ODL F 20 34 UNP P0A7V0 RS2_ECOLI 20 34 SEQADV 4ODL PRO A 150 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL SER A 151 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL GLY A 152 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL HIS A 153 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL HIS A 154 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL HIS A 155 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL HIS A 156 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL HIS A 157 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL HIS A 158 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL PRO B 150 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL SER B 151 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL GLY B 152 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL HIS B 153 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL HIS B 154 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL HIS B 155 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL HIS B 156 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL HIS B 157 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL HIS B 158 UNP Q5SLE7 EXPRESSION TAG SEQADV 4ODL NH2 C 35 UNP P0A7V0 AMIDATION SEQADV 4ODL NH2 D 35 UNP P0A7V0 AMIDATION SEQADV 4ODL NH2 E 35 UNP P0A7V0 AMIDATION SEQADV 4ODL NH2 F 35 UNP P0A7V0 AMIDATION SEQRES 1 A 158 MET LYS VAL GLY GLN ASP LYS VAL VAL THR ILE ARG TYR SEQRES 2 A 158 THR LEU GLN VAL GLU GLY GLU VAL LEU ASP GLN GLY GLU SEQRES 3 A 158 LEU SER TYR LEU HIS GLY HIS ARG ASN LEU ILE PRO GLY SEQRES 4 A 158 LEU GLU GLU ALA LEU GLU GLY ARG GLU GLU GLY GLU ALA SEQRES 5 A 158 PHE GLN ALA HIS VAL PRO ALA GLU LYS ALA TYR GLY PRO SEQRES 6 A 158 HIS ASP PRO GLU GLY VAL GLN VAL VAL PRO LEU SER ALA SEQRES 7 A 158 PHE PRO GLU ASP ALA GLU VAL VAL PRO GLY ALA GLN PHE SEQRES 8 A 158 TYR ALA GLN ASP MET GLU GLY ASN PRO MET PRO LEU THR SEQRES 9 A 158 VAL VAL ALA VAL GLU GLY GLU GLU VAL THR VAL ASP PHE SEQRES 10 A 158 ASN HIS PRO LEU ALA GLY LYS ASP LEU ASP PHE GLN VAL SEQRES 11 A 158 GLU VAL VAL LYS VAL ARG GLU ALA THR PRO GLU GLU LEU SEQRES 12 A 158 LEU HIS GLY HIS ALA HIS PRO SER GLY HIS HIS HIS HIS SEQRES 13 A 158 HIS HIS SEQRES 1 B 158 MET LYS VAL GLY GLN ASP LYS VAL VAL THR ILE ARG TYR SEQRES 2 B 158 THR LEU GLN VAL GLU GLY GLU VAL LEU ASP GLN GLY GLU SEQRES 3 B 158 LEU SER TYR LEU HIS GLY HIS ARG ASN LEU ILE PRO GLY SEQRES 4 B 158 LEU GLU GLU ALA LEU GLU GLY ARG GLU GLU GLY GLU ALA SEQRES 5 B 158 PHE GLN ALA HIS VAL PRO ALA GLU LYS ALA TYR GLY PRO SEQRES 6 B 158 HIS ASP PRO GLU GLY VAL GLN VAL VAL PRO LEU SER ALA SEQRES 7 B 158 PHE PRO GLU ASP ALA GLU VAL VAL PRO GLY ALA GLN PHE SEQRES 8 B 158 TYR ALA GLN ASP MET GLU GLY ASN PRO MET PRO LEU THR SEQRES 9 B 158 VAL VAL ALA VAL GLU GLY GLU GLU VAL THR VAL ASP PHE SEQRES 10 B 158 ASN HIS PRO LEU ALA GLY LYS ASP LEU ASP PHE GLN VAL SEQRES 11 B 158 GLU VAL VAL LYS VAL ARG GLU ALA THR PRO GLU GLU LEU SEQRES 12 B 158 LEU HIS GLY HIS ALA HIS PRO SER GLY HIS HIS HIS HIS SEQRES 13 B 158 HIS HIS SEQRES 1 C 16 THR ARG TYR TRP ASN PRO LYS MET LYS PRO PHE ILE PHE SEQRES 2 C 16 GLY ALA NH2 SEQRES 1 D 16 THR ARG TYR TRP ASN PRO LYS MET LYS PRO PHE ILE PHE SEQRES 2 D 16 GLY ALA NH2 SEQRES 1 E 16 THR ARG TYR TRP ASN PRO LYS MET LYS PRO PHE ILE PHE SEQRES 2 E 16 GLY ALA NH2 SEQRES 1 F 16 THR ARG TYR TRP ASN PRO LYS MET LYS PRO PHE ILE PHE SEQRES 2 F 16 GLY ALA NH2 HET NH2 C 35 1 HET NH2 D 35 1 HET NH2 E 35 1 HET NH2 F 35 1 HET CL A 201 1 HET CL B 201 1 HETNAM NH2 AMINO GROUP HETNAM CL CHLORIDE ION FORMUL 3 NH2 4(H2 N) FORMUL 7 CL 2(CL 1-) FORMUL 9 HOH *6(H2 O) HELIX 1 1 ILE A 37 GLU A 45 1 9 HELIX 2 2 PRO A 58 ALA A 62 5 5 HELIX 3 3 ASP A 67 GLU A 69 5 3 HELIX 4 4 SER A 77 PHE A 79 5 3 HELIX 5 5 THR A 139 GLY A 146 1 8 HELIX 6 6 ILE B 37 GLU B 45 1 9 HELIX 7 7 PRO B 58 ALA B 62 5 5 HELIX 8 8 ASP B 67 GLU B 69 5 3 HELIX 9 9 SER B 77 PHE B 79 5 3 HELIX 10 10 THR B 139 GLY B 146 1 8 SHEET 1 A 4 GLU A 20 LEU A 30 0 SHEET 2 A 4 LYS A 7 VAL A 17 -1 N LEU A 15 O ASP A 23 SHEET 3 A 4 LEU A 126 GLU A 137 -1 O ASP A 127 N GLN A 16 SHEET 4 A 4 ALA A 52 VAL A 57 -1 N VAL A 57 O LEU A 126 SHEET 1 B 5 VAL A 71 PRO A 75 0 SHEET 2 B 5 GLU A 112 ASP A 116 -1 O VAL A 113 N VAL A 74 SHEET 3 B 5 MET A 101 GLU A 109 -1 N VAL A 106 O THR A 114 SHEET 4 B 5 GLN A 90 GLN A 94 -1 N ALA A 93 O MET A 101 SHEET 5 B 5 PHE D 30 PHE D 32 -1 O PHE D 32 N TYR A 92 SHEET 1 C 4 GLU B 20 LEU B 30 0 SHEET 2 C 4 LYS B 7 VAL B 17 -1 N LEU B 15 O ASP B 23 SHEET 3 C 4 LEU B 126 GLU B 137 -1 O GLU B 131 N ARG B 12 SHEET 4 C 4 ALA B 52 VAL B 57 -1 N VAL B 57 O LEU B 126 SHEET 1 D 4 VAL B 71 PRO B 75 0 SHEET 2 D 4 GLU B 112 ASP B 116 -1 O VAL B 115 N GLN B 72 SHEET 3 D 4 PRO B 100 GLU B 109 -1 N VAL B 106 O THR B 114 SHEET 4 D 4 GLN B 90 GLN B 94 -1 N ALA B 93 O MET B 101 LINK C ALA C 34 N NH2 C 35 1555 1555 1.33 LINK C ALA D 34 N NH2 D 35 1555 1555 1.33 LINK C ALA E 34 N NH2 E 35 1555 1555 1.33 LINK C ALA F 34 N NH2 F 35 1555 1555 1.33 CISPEP 1 LYS C 28 PRO C 29 0 7.88 CISPEP 2 THR D 20 ARG D 21 0 0.00 CISPEP 3 LYS E 28 PRO E 29 0 7.42 CISPEP 4 LYS F 28 PRO F 29 0 6.76 SITE 1 AC1 5 TYR A 29 LEU A 30 ASN A 35 ALA A 148 SITE 2 AC1 5 LYS F 28 SITE 1 AC2 5 ASP A 82 LEU B 30 ASN B 35 ALA B 148 SITE 2 AC2 5 LYS E 28 CRYST1 110.880 110.880 182.310 90.00 90.00 120.00 P 62 2 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009019 0.005207 0.000000 0.00000 SCALE2 0.000000 0.010414 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005485 0.00000 MASTER 405 0 6 10 17 0 4 6 0 0 0 34 END