HEADER METAL/DNA BINDING PROTEIN 20-DEC-13 4O62 TITLE CW-TYPE ZINC FINGER OF ZCWPW2 IN COMPLEX WITH THE AMINO TERMINUS OF TITLE 2 HISTONE H3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER CW-TYPE PWWP DOMAIN PROTEIN 2; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 21-78; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HISTONE H3.3; COMPND 8 CHAIN: D; COMPND 9 FRAGMENT: UNP RESIDUES 2-12; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZCWPW2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3)-V2R-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A-MHL; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS ZINC FINGER, HISTONE, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, METAL-DNA BINDING PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.LIU,W.TEMPEL,A.DONG,P.LOPPNAU,C.BOUNTRA,J.WEIGELT,C.H.ARROWSMITH, AUTHOR 2 A.M.EDWARDS,J.MIN,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 2 08-JUN-16 4O62 1 JRNL REVDAT 1 26-MAR-14 4O62 0 JRNL AUTH Y.LIU,W.TEMPEL,Q.ZHANG,X.LIANG,P.LOPPNAU,S.QIN,J.MIN JRNL TITL FAMILY-WIDE CHARACTERIZATION OF HISTONE BINDING ABILITIES OF JRNL TITL 2 HUMAN CW DOMAIN-CONTAINING PROTEINS. JRNL REF J.BIOL.CHEM. V. 291 9000 2016 JRNL REFN ISSN 0021-9258 JRNL PMID 26933034 JRNL DOI 10.1074/JBC.M116.718973 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 36369 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : THIN SHELLS (SFTOOLS) REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1587 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2487 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 181 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1462 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 169 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.01000 REMARK 3 B22 (A**2) : -1.01000 REMARK 3 B33 (A**2) : 3.27000 REMARK 3 B12 (A**2) : -0.50000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.073 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.074 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.062 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.963 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1518 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1300 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2067 ; 1.370 ; 1.909 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3002 ; 0.747 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 181 ; 6.334 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 89 ;30.335 ;25.618 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 254 ;10.110 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;16.769 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 213 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1763 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 374 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 708 ; 2.489 ; 2.204 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 707 ; 2.448 ; 2.193 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 880 ; 3.334 ; 3.254 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 1001 REMARK 3 ORIGIN FOR THE GROUP (A): 2.5098 25.5864 33.5332 REMARK 3 T TENSOR REMARK 3 T11: 0.0112 T22: 0.1434 REMARK 3 T33: 0.0724 T12: -0.0210 REMARK 3 T13: -0.0199 T23: -0.0056 REMARK 3 L TENSOR REMARK 3 L11: 5.5171 L22: 5.0101 REMARK 3 L33: 1.5066 L12: 3.9482 REMARK 3 L13: -0.2810 L23: 0.6302 REMARK 3 S TENSOR REMARK 3 S11: 0.0757 S12: -0.2547 S13: 0.1483 REMARK 3 S21: 0.0271 S22: -0.1686 S23: 0.3071 REMARK 3 S31: 0.0283 S32: -0.3733 S33: 0.0929 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 22 B 1001 REMARK 3 ORIGIN FOR THE GROUP (A): 19.0196 10.4628 29.5110 REMARK 3 T TENSOR REMARK 3 T11: 0.1704 T22: 0.0482 REMARK 3 T33: 0.1691 T12: 0.0182 REMARK 3 T13: -0.0454 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 2.4753 L22: 7.3716 REMARK 3 L33: 2.1192 L12: -1.2657 REMARK 3 L13: 0.6308 L23: -2.1173 REMARK 3 S TENSOR REMARK 3 S11: 0.0013 S12: -0.1092 S13: -0.1149 REMARK 3 S21: 0.2519 S22: -0.0107 S23: -0.3406 REMARK 3 S31: 0.2406 S32: 0.2180 S33: 0.0094 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 21 C 1001 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8601 34.2601 19.9439 REMARK 3 T TENSOR REMARK 3 T11: 0.0313 T22: 0.0147 REMARK 3 T33: 0.0239 T12: 0.0022 REMARK 3 T13: -0.0122 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 2.6500 L22: 6.6815 REMARK 3 L33: 2.8272 L12: 3.0707 REMARK 3 L13: -1.9472 L23: -2.6384 REMARK 3 S TENSOR REMARK 3 S11: 0.0230 S12: 0.0550 S13: -0.1315 REMARK 3 S21: -0.1589 S22: -0.1088 S23: -0.0963 REMARK 3 S31: 0.1567 S32: -0.0738 S33: 0.0858 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MODEL AUTO BUILDING WAS PERFORMED WIT REMARK 3 ARP/WARP. MANUAL MODEL BUILDING WAS DONE IN COOT. MODEL GEOMETRY REMARK 3 WAS VALIDATED WITH MOLPROBITY. REMARK 4 REMARK 4 4O62 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-DEC-13. REMARK 100 THE RCSB ID CODE IS RCSB084087. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.28303 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36371 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 41.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.01100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULFATE, 2% PEG400, 0.1 M REMARK 280 SODIUM HEPES, PH 7.5, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 63.54750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.68917 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 21.01533 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 63.54750 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 36.68917 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 21.01533 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 63.54750 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 36.68917 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.01533 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 73.37833 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 42.03067 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 73.37833 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 42.03067 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 73.37833 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 42.03067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AS PER THE AUTHORS THE BIOLOGICAL ASSEMBLY IS UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 20 REMARK 465 VAL A 21 REMARK 465 PHE A 78 REMARK 465 GLY B 20 REMARK 465 VAL B 21 REMARK 465 GLY C 20 REMARK 465 PHE C 78 REMARK 465 ALA D 7 REMARK 465 ARG D 8 REMARK 465 LYS D 9 REMARK 465 SER D 10 REMARK 465 THR D 11 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 36 CG CD OE1 OE2 REMARK 470 LYS A 51 NZ REMARK 470 GLU B 22 CG CD OE1 OE2 REMARK 470 GLU B 36 CG CD OE1 OE2 REMARK 470 VAL C 21 N CA CB CG1 CG2 REMARK 470 ASP C 55 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 38 -71.51 -115.65 REMARK 500 CYS B 38 -75.86 -113.31 REMARK 500 TYR B 68 36.15 -144.09 REMARK 500 CYS C 38 -73.26 -118.10 REMARK 500 TYR C 68 42.72 -140.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 38 SG REMARK 620 2 CYS C 33 SG 113.3 REMARK 620 3 CYS C 71 SG 107.1 108.6 REMARK 620 4 CYS C 60 SG 108.2 106.1 113.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 71 SG REMARK 620 2 CYS B 60 SG 113.0 REMARK 620 3 CYS B 38 SG 108.7 109.4 REMARK 620 4 CYS B 33 SG 107.1 106.4 112.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 33 SG REMARK 620 2 CYS A 38 SG 114.3 REMARK 620 3 CYS A 60 SG 107.7 107.5 REMARK 620 4 CYS A 71 SG 107.4 107.0 113.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 1001 DBREF 4O62 A 21 78 UNP Q504Y3 ZCPW2_HUMAN 21 78 DBREF 4O62 B 21 78 UNP Q504Y3 ZCPW2_HUMAN 21 78 DBREF 4O62 C 21 78 UNP Q504Y3 ZCPW2_HUMAN 21 78 DBREF 4O62 D 1 11 UNP K7ES00 K7ES00_HUMAN 2 12 SEQADV 4O62 GLY A 20 UNP Q504Y3 EXPRESSION TAG SEQADV 4O62 GLY B 20 UNP Q504Y3 EXPRESSION TAG SEQADV 4O62 GLY C 20 UNP Q504Y3 EXPRESSION TAG SEQRES 1 A 59 GLY VAL GLU ASN MET TYR VAL ASN LYS VAL TRP VAL GLN SEQRES 2 A 59 CYS GLU ASN GLU ASN CYS LEU LYS TRP ARG LEU LEU SER SEQRES 3 A 59 SER GLU ASP SER ALA LYS VAL ASP HIS ASP GLU PRO TRP SEQRES 4 A 59 TYR CYS PHE MET ASN THR ASP SER ARG TYR ASN ASN CYS SEQRES 5 A 59 SER ILE SER GLU GLU ASP PHE SEQRES 1 B 59 GLY VAL GLU ASN MET TYR VAL ASN LYS VAL TRP VAL GLN SEQRES 2 B 59 CYS GLU ASN GLU ASN CYS LEU LYS TRP ARG LEU LEU SER SEQRES 3 B 59 SER GLU ASP SER ALA LYS VAL ASP HIS ASP GLU PRO TRP SEQRES 4 B 59 TYR CYS PHE MET ASN THR ASP SER ARG TYR ASN ASN CYS SEQRES 5 B 59 SER ILE SER GLU GLU ASP PHE SEQRES 1 C 59 GLY VAL GLU ASN MET TYR VAL ASN LYS VAL TRP VAL GLN SEQRES 2 C 59 CYS GLU ASN GLU ASN CYS LEU LYS TRP ARG LEU LEU SER SEQRES 3 C 59 SER GLU ASP SER ALA LYS VAL ASP HIS ASP GLU PRO TRP SEQRES 4 C 59 TYR CYS PHE MET ASN THR ASP SER ARG TYR ASN ASN CYS SEQRES 5 C 59 SER ILE SER GLU GLU ASP PHE SEQRES 1 D 11 ALA ARG THR M3L GLN THR ALA ARG LYS SER THR MODRES 4O62 M3L D 4 LYS N-TRIMETHYLLYSINE HET M3L D 4 12 HET ZN A1001 1 HET UNX A1002 1 HET UNX A1003 1 HET UNX A1004 1 HET UNX A1005 1 HET UNX A1006 1 HET UNX A1007 1 HET UNX A1008 1 HET UNX A1009 1 HET UNX A1010 1 HET UNX A1011 1 HET UNX A1012 1 HET ZN B1001 1 HET UNX B1002 1 HET UNX B1003 1 HET UNX B1004 1 HET UNX B1005 1 HET UNX B1006 1 HET UNX B1007 1 HET UNX B1008 1 HET ZN C1001 1 HET UNX C1002 1 HET UNX C1003 1 HET UNX C1004 1 HET UNX C1005 1 HET UNX C1006 1 HET UNX C1007 1 HET UNX C1008 1 HET UNX C1009 1 HET UNX C1010 1 HETNAM M3L N-TRIMETHYLLYSINE HETNAM ZN ZINC ION HETNAM UNX UNKNOWN ATOM OR ION FORMUL 4 M3L C9 H21 N2 O2 1+ FORMUL 5 ZN 3(ZN 2+) FORMUL 6 UNX 27(X) FORMUL 35 HOH *169(H2 O) HELIX 1 1 SER A 45 VAL A 52 1 8 HELIX 2 2 TYR A 59 ASN A 63 5 5 HELIX 3 3 SER B 45 VAL B 52 1 8 HELIX 4 4 TYR B 59 ASN B 63 5 5 HELIX 5 5 SER C 45 VAL C 52 1 8 HELIX 6 6 TYR C 59 ASN C 63 5 5 SHEET 1 A 2 TRP A 30 GLN A 32 0 SHEET 2 A 2 TRP A 41 LEU A 43 -1 O ARG A 42 N VAL A 31 SHEET 1 B 3 TRP B 41 LEU B 43 0 SHEET 2 B 3 VAL B 29 GLN B 32 -1 N VAL B 31 O ARG B 42 SHEET 3 B 3 THR D 3 GLN D 5 -1 O M3L D 4 N TRP B 30 SHEET 1 C 2 TRP C 30 GLN C 32 0 SHEET 2 C 2 TRP C 41 LEU C 43 -1 O ARG C 42 N VAL C 31 LINK C THR D 3 N M3L D 4 1555 1555 1.34 LINK C M3L D 4 N GLN D 5 1555 1555 1.34 LINK SG CYS C 38 ZN ZN C1001 1555 1555 2.30 LINK SG CYS B 71 ZN ZN B1001 1555 1555 2.31 LINK SG CYS A 33 ZN ZN A1001 1555 1555 2.31 LINK SG CYS C 33 ZN ZN C1001 1555 1555 2.32 LINK SG CYS C 71 ZN ZN C1001 1555 1555 2.32 LINK SG CYS B 60 ZN ZN B1001 1555 1555 2.33 LINK SG CYS B 38 ZN ZN B1001 1555 1555 2.34 LINK SG CYS C 60 ZN ZN C1001 1555 1555 2.34 LINK SG CYS A 38 ZN ZN A1001 1555 1555 2.34 LINK SG CYS A 60 ZN ZN A1001 1555 1555 2.36 LINK SG CYS A 71 ZN ZN A1001 1555 1555 2.37 LINK SG CYS B 33 ZN ZN B1001 1555 1555 2.37 SITE 1 AC1 4 CYS A 33 CYS A 38 CYS A 60 CYS A 71 SITE 1 AC2 4 CYS B 33 CYS B 38 CYS B 60 CYS B 71 SITE 1 AC3 4 CYS C 33 CYS C 38 CYS C 60 CYS C 71 CRYST1 127.095 127.095 63.046 90.00 90.00 120.00 H 3 27 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007868 0.004543 0.000000 0.00000 SCALE2 0.000000 0.009085 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015861 0.00000 MASTER 407 0 31 6 7 0 3 6 0 0 0 16 END