HEADER TRANSCRIPTION REGULATOR 19-DEC-13 4O5A TITLE THE CRYSTAL STRUCTURE OF A LACI FAMILY TRANSCRIPTIONAL REGULATOR FROM TITLE 2 BIFIDOBACTERIUM ANIMALIS SUBSP. LACTIS DSM 10140 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LACI FAMILY TRANSCRIPTION REGULATOR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BIFIDOBACTERIUM ANIMALIS SUBSP. LACTIS; SOURCE 3 ORGANISM_TAXID: 555970; SOURCE 4 STRAIN: DSM 10140; SOURCE 5 GENE: BALAT_0153; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, TRANSCRIPTION KEYWDS 3 REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,H.LI,M.ENDRES,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 1 15-JAN-14 4O5A 0 JRNL AUTH K.TAN,H.LI,M.ENDRES,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF A LACI FAMILY TRANSCRIPTIONAL JRNL TITL 2 REGULATOR FROM BIFIDOBACTERIUM ANIMALIS SUBSP. LACTIS DSM JRNL TITL 3 10140. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 32085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1616 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.9698 - 4.0648 0.95 2541 132 0.1493 0.1773 REMARK 3 2 4.0648 - 3.2281 0.99 2578 143 0.1456 0.1564 REMARK 3 3 3.2281 - 2.8205 0.98 2602 141 0.1722 0.2147 REMARK 3 4 2.8205 - 2.5629 0.98 2559 132 0.1731 0.1964 REMARK 3 5 2.5629 - 2.3793 0.98 2564 141 0.1730 0.2325 REMARK 3 6 2.3793 - 2.2391 0.98 2546 145 0.1729 0.1986 REMARK 3 7 2.2391 - 2.1270 0.97 2530 133 0.1716 0.2002 REMARK 3 8 2.1270 - 2.0344 0.97 2534 126 0.1730 0.2271 REMARK 3 9 2.0344 - 1.9561 0.97 2518 143 0.1707 0.2000 REMARK 3 10 1.9561 - 1.8887 0.97 2530 127 0.1861 0.2430 REMARK 3 11 1.8887 - 1.8296 0.96 2526 135 0.2205 0.2728 REMARK 3 12 1.8296 - 1.7773 0.94 2441 118 0.2511 0.3385 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.31 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2150 REMARK 3 ANGLE : 1.092 2930 REMARK 3 CHIRALITY : 0.074 343 REMARK 3 PLANARITY : 0.005 377 REMARK 3 DIHEDRAL : 12.749 804 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: chain 'A' and (resid 63 through 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.7508 65.7724 19.2812 REMARK 3 T TENSOR REMARK 3 T11: 0.1761 T22: 0.2336 REMARK 3 T33: 0.2402 T12: -0.0299 REMARK 3 T13: -0.0300 T23: 0.0464 REMARK 3 L TENSOR REMARK 3 L11: 2.4404 L22: 3.1605 REMARK 3 L33: 3.9288 L12: -0.4345 REMARK 3 L13: -0.6482 L23: 0.6454 REMARK 3 S TENSOR REMARK 3 S11: -0.0948 S12: 0.3277 S13: 0.1167 REMARK 3 S21: -0.2975 S22: 0.0367 S23: 0.4609 REMARK 3 S31: -0.1666 S32: -0.5430 S33: 0.0489 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: chain 'A' and (resid 172 through 289 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3917 35.1897 14.8135 REMARK 3 T TENSOR REMARK 3 T11: 0.1209 T22: 0.1289 REMARK 3 T33: 0.1441 T12: -0.0282 REMARK 3 T13: 0.0025 T23: -0.0317 REMARK 3 L TENSOR REMARK 3 L11: 2.0729 L22: 1.3247 REMARK 3 L33: 4.3184 L12: -0.0277 REMARK 3 L13: 0.0630 L23: -0.5849 REMARK 3 S TENSOR REMARK 3 S11: -0.0576 S12: 0.2073 S13: -0.0459 REMARK 3 S21: -0.0509 S22: 0.0074 S23: 0.1249 REMARK 3 S31: 0.0070 S32: -0.1741 S33: 0.0355 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: chain 'A' and (resid 290 through 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.9513 50.8706 15.1787 REMARK 3 T TENSOR REMARK 3 T11: 0.2545 T22: 0.2244 REMARK 3 T33: 0.1679 T12: -0.0481 REMARK 3 T13: 0.0395 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 0.4955 L22: 5.5637 REMARK 3 L33: 0.2636 L12: -0.1375 REMARK 3 L13: -0.0059 L23: -0.0279 REMARK 3 S TENSOR REMARK 3 S11: -0.0395 S12: 0.1265 S13: 0.0840 REMARK 3 S21: -0.6218 S22: 0.0039 S23: -0.3029 REMARK 3 S31: -0.0798 S32: 0.1074 S33: 0.0316 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4O5A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JAN-14. REMARK 100 THE RCSB ID CODE IS RCSB084059. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97921 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32091 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 27.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.75100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD/MLPHARE/DM/ARP/WARP/HKL3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1M TRIS:HCL, REMARK 280 25% (W/V) PEG3350, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 32.60700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.45650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 32.60700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 44.45650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: EXPERIMENTALLY UNKNOWN. IT IS PREDICTED THAT THE CHAIN A REMARK 300 AND ITS SYMMETRY-RELATED MOLECULE BY AN OPERATOR (-X+1,Y,-Z+1) FORM REMARK 300 A DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 60.30740 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 60.32479 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 504 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 673 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 VAL A 2 REMARK 465 ALA A 3 REMARK 465 GLN A 4 REMARK 465 LYS A 5 REMARK 465 ALA A 6 REMARK 465 LYS A 7 REMARK 465 VAL A 8 REMARK 465 THR A 9 REMARK 465 ILE A 10 REMARK 465 PHE A 11 REMARK 465 ASP A 12 REMARK 465 VAL A 13 REMARK 465 ALA A 14 REMARK 465 LYS A 15 REMARK 465 ALA A 16 REMARK 465 SER A 17 REMARK 465 GLY A 18 REMARK 465 VAL A 19 REMARK 465 SER A 20 REMARK 465 SER A 21 REMARK 465 SER A 22 REMARK 465 ALA A 23 REMARK 465 VAL A 24 REMARK 465 SER A 25 REMARK 465 TYR A 26 REMARK 465 ALA A 27 REMARK 465 LEU A 28 REMARK 465 ASN A 29 REMARK 465 GLY A 30 REMARK 465 LYS A 31 REMARK 465 PRO A 32 REMARK 465 GLY A 33 REMARK 465 VAL A 34 REMARK 465 SER A 35 REMARK 465 ASP A 36 REMARK 465 ALA A 37 REMARK 465 THR A 38 REMARK 465 ARG A 39 REMARK 465 GLU A 40 REMARK 465 LYS A 41 REMARK 465 VAL A 42 REMARK 465 LEU A 43 REMARK 465 GLN A 44 REMARK 465 VAL A 45 REMARK 465 ALA A 46 REMARK 465 ARG A 47 REMARK 465 LYS A 48 REMARK 465 LEU A 49 REMARK 465 GLY A 50 REMARK 465 TRP A 51 REMARK 465 ARG A 52 REMARK 465 PRO A 53 REMARK 465 ASN A 54 REMARK 465 GLY A 55 REMARK 465 ALA A 56 REMARK 465 ALA A 57 REMARK 465 GLN A 58 REMARK 465 SER A 59 REMARK 465 LEU A 60 REMARK 465 ALA A 61 REMARK 465 GLN A 62 REMARK 465 PRO A 76 REMARK 465 GLN A 77 REMARK 465 LEU A 78 REMARK 465 LEU A 79 REMARK 465 SER A 80 REMARK 465 ALA A 81 REMARK 465 GLU A 82 REMARK 465 PRO A 83 REMARK 465 GLN A 342 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 110 CG OD1 OD2 REMARK 470 ASP A 111 CG OD1 OD2 REMARK 470 ASP A 112 CG OD1 OD2 REMARK 470 GLU A 143 CG CD OE1 OE2 REMARK 470 LYS A 189 CD CE NZ REMARK 470 GLU A 198 CG CD OE1 OE2 REMARK 470 GLU A 199 CG CD OE1 OE2 REMARK 470 GLU A 244 CG CD OE1 OE2 REMARK 470 GLU A 325 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 228 -4.60 79.40 REMARK 500 ARG A 334 -167.20 -126.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC108884 RELATED DB: TARGETTRACK DBREF 4O5A A 1 342 UNP C6AGK7 C6AGK7_BIFAS 1 342 SEQADV 4O5A SER A -2 UNP C6AGK7 EXPRESSION TAG SEQADV 4O5A ASN A -1 UNP C6AGK7 EXPRESSION TAG SEQADV 4O5A ALA A 0 UNP C6AGK7 EXPRESSION TAG SEQRES 1 A 345 SER ASN ALA MSE VAL ALA GLN LYS ALA LYS VAL THR ILE SEQRES 2 A 345 PHE ASP VAL ALA LYS ALA SER GLY VAL SER SER SER ALA SEQRES 3 A 345 VAL SER TYR ALA LEU ASN GLY LYS PRO GLY VAL SER ASP SEQRES 4 A 345 ALA THR ARG GLU LYS VAL LEU GLN VAL ALA ARG LYS LEU SEQRES 5 A 345 GLY TRP ARG PRO ASN GLY ALA ALA GLN SER LEU ALA GLN SEQRES 6 A 345 SER ARG THR ARG ARG ILE GLY LEU VAL LEU GLY TYR ASP SEQRES 7 A 345 PRO GLN LEU LEU SER ALA GLU PRO TYR ILE MSE ARG LEU SEQRES 8 A 345 ILE SER GLY LEU GLY SER ALA LEU GLU GLU ARG ASP TYR SEQRES 9 A 345 SER LEU LEU VAL ARG MSE SER MSE ASP ASP ASP ASP GLU SEQRES 10 A 345 VAL SER ILE LEU GLU ASP TRP ILE ALA THR GLY ASN VAL SEQRES 11 A 345 ASP ALA LEU LEU LEU LEU ASN LEU GLU ILE GLY ASP PRO SEQRES 12 A 345 ARG ILE GLU LEU MSE LYS ASN ASN PRO GLN MSE PRO CYS SEQRES 13 A 345 LEU ALA LEU ALA ASP SER SER LEU THR SER GLY LEU PRO SEQRES 14 A 345 THR LEU MSE SER ASP ASP ALA ALA ALA SER GLY THR MSE SEQRES 15 A 345 ILE ARG HIS LEU ALA LEU PHE GLY HIS LYS ASN ILE ALA SEQRES 16 A 345 ARG VAL ALA GLY PRO GLU GLU LEU GLY HIS SER TYR ILE SEQRES 17 A 345 ARG ASP ALA ALA PHE SER GLU ILE THR THR GLU LEU GLY SEQRES 18 A 345 MSE ARG TYR ARG OCS LEU HIS THR ASP TYR THR PRO GLU SEQRES 19 A 345 SER GLY ALA GLU ALA THR LYS ARG LEU LEU SER VAL GLU SEQRES 20 A 345 PRO ARG PRO THR ALA ILE ILE TYR ASP ASN ASP VAL MSE SEQRES 21 A 345 ALA LEU ALA GLY GLU SER VAL ALA SER VAL LYS GLY VAL SEQRES 22 A 345 ARG VAL PRO GLU ASP LEU SER ILE ILE SER TRP GLY ASP SEQRES 23 A 345 SER PHE MSE ASN VAL ALA ALA HIS PRO PRO ILE THR ALA SEQRES 24 A 345 LEU SER ARG ASN ILE LEU GLU SER GLY ARG LEU ALA ALA SEQRES 25 A 345 GLN LEU MSE LEU LYS LEU ILE ASP GLY GLU ASP VAL GLU SEQRES 26 A 345 ASN VAL GLU GLU PRO PRO TYR GLU LEU ILE GLU ARG ALA SEQRES 27 A 345 SER THR ALA PRO ALA ALA GLN MODRES 4O5A MSE A 86 MET SELENOMETHIONINE MODRES 4O5A MSE A 107 MET SELENOMETHIONINE MODRES 4O5A MSE A 109 MET SELENOMETHIONINE MODRES 4O5A MSE A 145 MET SELENOMETHIONINE MODRES 4O5A MSE A 151 MET SELENOMETHIONINE MODRES 4O5A MSE A 169 MET SELENOMETHIONINE MODRES 4O5A MSE A 179 MET SELENOMETHIONINE MODRES 4O5A MSE A 219 MET SELENOMETHIONINE MODRES 4O5A OCS A 223 CYS CYSTEINESULFONIC ACID MODRES 4O5A MSE A 257 MET SELENOMETHIONINE MODRES 4O5A MSE A 286 MET SELENOMETHIONINE MODRES 4O5A MSE A 312 MET SELENOMETHIONINE HET MSE A 86 8 HET MSE A 107 8 HET MSE A 109 8 HET MSE A 145 8 HET MSE A 151 8 HET MSE A 169 8 HET MSE A 179 8 HET MSE A 219 8 HET OCS A 223 9 HET MSE A 257 8 HET MSE A 286 8 HET MSE A 312 8 HET GOL A 401 6 HET GOL A 402 6 HET GOL A 403 6 HET SO4 A 404 5 HET SO4 A 405 5 HETNAM MSE SELENOMETHIONINE HETNAM OCS CYSTEINESULFONIC ACID HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 11(C5 H11 N O2 SE) FORMUL 1 OCS C3 H7 N O5 S FORMUL 2 GOL 3(C3 H8 O3) FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 HOH *195(H2 O) HELIX 1 1 ILE A 85 GLU A 97 1 13 HELIX 2 2 GLU A 98 ASP A 100 5 3 HELIX 3 3 ASP A 112 GLY A 125 1 14 HELIX 4 4 ASP A 139 ASN A 147 1 9 HELIX 5 5 ASP A 158 THR A 162 5 5 HELIX 6 6 ASP A 171 PHE A 186 1 16 HELIX 7 7 HIS A 202 LEU A 217 1 16 HELIX 8 8 THR A 229 VAL A 243 1 15 HELIX 9 9 ASN A 254 GLY A 269 1 16 HELIX 10 10 SER A 284 ALA A 290 1 7 HELIX 11 11 ASN A 300 GLY A 318 1 19 SHEET 1 A 6 SER A 102 SER A 108 0 SHEET 2 A 6 ARG A 67 GLY A 73 1 N ILE A 68 O LEU A 104 SHEET 3 A 6 ALA A 129 LEU A 132 1 O ALA A 129 N GLY A 69 SHEET 4 A 6 CYS A 153 ALA A 157 1 O LEU A 154 N LEU A 132 SHEET 5 A 6 THR A 167 MSE A 169 1 O LEU A 168 N ALA A 155 SHEET 6 A 6 VAL A 324 GLU A 325 1 O VAL A 324 N MSE A 169 SHEET 1 B 6 ARG A 220 HIS A 225 0 SHEET 2 B 6 ASN A 190 ALA A 195 1 N ILE A 191 O ARG A 220 SHEET 3 B 6 ALA A 249 TYR A 252 1 O ILE A 251 N VAL A 194 SHEET 4 B 6 SER A 277 TRP A 281 1 O TRP A 281 N TYR A 252 SHEET 5 B 6 THR A 295 SER A 298 1 O THR A 295 N SER A 280 SHEET 6 B 6 GLU A 330 ILE A 332 -1 O GLU A 330 N SER A 298 LINK C ILE A 85 N MSE A 86 1555 1555 1.34 LINK C MSE A 86 N ARG A 87 1555 1555 1.32 LINK C ARG A 106 N MSE A 107 1555 1555 1.32 LINK C MSE A 107 N SER A 108 1555 1555 1.33 LINK C SER A 108 N MSE A 109 1555 1555 1.33 LINK C MSE A 109 N ASP A 110 1555 1555 1.33 LINK C LEU A 144 N MSE A 145 1555 1555 1.33 LINK C MSE A 145 N LYS A 146 1555 1555 1.33 LINK C GLN A 150 N MSE A 151 1555 1555 1.33 LINK C MSE A 151 N PRO A 152 1555 1555 1.35 LINK C LEU A 168 N MSE A 169 1555 1555 1.33 LINK C MSE A 169 N SER A 170 1555 1555 1.33 LINK C THR A 178 N MSE A 179 1555 1555 1.33 LINK C MSE A 179 N ILE A 180 1555 1555 1.32 LINK C GLY A 218 N MSE A 219 1555 1555 1.33 LINK C MSE A 219 N ARG A 220 1555 1555 1.33 LINK C ARG A 222 N OCS A 223 1555 1555 1.33 LINK C OCS A 223 N LEU A 224 1555 1555 1.33 LINK C VAL A 256 N MSE A 257 1555 1555 1.33 LINK C MSE A 257 N ALA A 258 1555 1555 1.34 LINK C PHE A 285 N MSE A 286 1555 1555 1.33 LINK C MSE A 286 N ASN A 287 1555 1555 1.32 LINK C LEU A 311 N MSE A 312 1555 1555 1.33 LINK C MSE A 312 N LEU A 313 1555 1555 1.33 CISPEP 1 GLU A 244 PRO A 245 0 -3.02 CISPEP 2 VAL A 272 PRO A 273 0 8.92 CISPEP 3 HIS A 291 PRO A 292 0 1.68 SITE 1 AC1 4 ASP A 158 SER A 159 SER A 170 ASP A 171 SITE 1 AC2 3 ARG A 64 ARG A 239 ASP A 317 SITE 1 AC3 4 ARG A 87 SER A 284 PHE A 285 HOH A 674 SITE 1 AC4 3 GLU A 303 ARG A 306 GLN A 310 SITE 1 AC5 4 ARG A 220 ARG A 222 HOH A 533 HOH A 695 CRYST1 65.214 88.913 60.524 90.00 94.65 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015334 0.000000 0.001247 0.00000 SCALE2 0.000000 0.011247 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016577 0.00000 MASTER 404 0 17 11 12 0 5 6 0 0 0 27 END