HEADER TRANSPORT PROTEIN 11-OCT-13 4N6D TITLE CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM TITLE 2 DESULFOVIBRIO SALEXIGENS DSM2638 (DESAL_3247), TARGET EFI-510112, TITLE 3 PHASED WITH I3C, OPEN COMPLEX, C-TERMINUS OF SYMMETRY MATE BOUND IN TITLE 4 LIGAND BINDING SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRAP DICARBOXYLATE TRANSPORTER-DCTP SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TRAP PERIPLASMIC SOLUTE BINDING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO SALEXIGENS; SOURCE 3 ORGANISM_TAXID: 526222; SOURCE 4 STRAIN: ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763; SOURCE 5 GENE: DESAL_3247; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS TRAP PERIPLASMIC SOLUTE BINDING FAMILY, ENZYME FUNCTION INITIATIVE, KEYWDS 2 EFI, STRUCTURAL GENOMICS, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,N.F.AL OBAIDI,M.STEAD,J.D.ATTONITO,A.SCOTT GLENN, AUTHOR 2 S.CHOWDHURY,B.EVANS,B.HILLERICH,J.LOVE,R.D.SEIDEL,H.J.IMKER, AUTHOR 3 J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) REVDAT 3 15-NOV-17 4N6D 1 REMARK REVDAT 2 25-FEB-15 4N6D 1 JRNL REVDAT 1 30-OCT-13 4N6D 0 JRNL AUTH M.W.VETTING,N.AL-OBAIDI,S.ZHAO,B.SAN FRANCISCO,J.KIM, JRNL AUTH 2 D.J.WICHELECKI,J.T.BOUVIER,J.O.SOLBIATI,H.VU,X.ZHANG, JRNL AUTH 3 D.A.RODIONOV,J.D.LOVE,B.S.HILLERICH,R.D.SEIDEL,R.J.QUINN, JRNL AUTH 4 A.L.OSTERMAN,J.E.CRONAN,M.P.JACOBSON,J.A.GERLT,S.C.ALMO JRNL TITL EXPERIMENTAL STRATEGIES FOR FUNCTIONAL ANNOTATION AND JRNL TITL 2 METABOLISM DISCOVERY: TARGETED SCREENING OF SOLUTE BINDING JRNL TITL 3 PROTEINS AND UNBIASED PANNING OF METABOLOMES. JRNL REF BIOCHEMISTRY V. 54 909 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 25540822 JRNL DOI 10.1021/BI501388Y REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 36641 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1834 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.9835 - 3.9911 1.00 2877 181 0.1569 0.1898 REMARK 3 2 3.9911 - 3.1709 1.00 2796 143 0.1422 0.1735 REMARK 3 3 3.1709 - 2.7710 1.00 2774 122 0.1508 0.1572 REMARK 3 4 2.7710 - 2.5180 1.00 2714 154 0.1475 0.1793 REMARK 3 5 2.5180 - 2.3378 1.00 2723 134 0.1315 0.1859 REMARK 3 6 2.3378 - 2.2001 1.00 2709 135 0.1316 0.1629 REMARK 3 7 2.2001 - 2.0900 0.99 2686 147 0.1319 0.1726 REMARK 3 8 2.0900 - 1.9991 0.99 2666 142 0.1384 0.1872 REMARK 3 9 1.9991 - 1.9222 0.99 2707 139 0.1488 0.2257 REMARK 3 10 1.9222 - 1.8559 0.99 2638 125 0.1497 0.1955 REMARK 3 11 1.8559 - 1.7979 0.99 2670 137 0.1499 0.2156 REMARK 3 12 1.7979 - 1.7465 0.96 2583 137 0.1576 0.2115 REMARK 3 13 1.7465 - 1.7000 0.85 2264 138 0.1607 0.2085 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2613 REMARK 3 ANGLE : 1.213 3543 REMARK 3 CHIRALITY : 0.068 389 REMARK 3 PLANARITY : 0.006 452 REMARK 3 DIHEDRAL : 12.271 984 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.7547 36.2962 -0.3152 REMARK 3 T TENSOR REMARK 3 T11: 0.0703 T22: 0.0665 REMARK 3 T33: 0.0715 T12: -0.0068 REMARK 3 T13: 0.0008 T23: -0.0131 REMARK 3 L TENSOR REMARK 3 L11: 0.9631 L22: 0.8302 REMARK 3 L33: 0.3457 L12: -0.3867 REMARK 3 L13: 0.1323 L23: -0.3123 REMARK 3 S TENSOR REMARK 3 S11: -0.0245 S12: -0.0225 S13: 0.0565 REMARK 3 S21: -0.0048 S22: 0.0267 S23: 0.0099 REMARK 3 S31: -0.0125 S32: -0.0329 S33: -0.0046 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2722 19.3545 21.9447 REMARK 3 T TENSOR REMARK 3 T11: 0.1452 T22: 0.1707 REMARK 3 T33: 0.1479 T12: -0.0156 REMARK 3 T13: 0.0473 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 0.3008 L22: 1.2261 REMARK 3 L33: 0.9528 L12: 0.2517 REMARK 3 L13: 0.3010 L23: 0.1494 REMARK 3 S TENSOR REMARK 3 S11: -0.0043 S12: -0.1216 S13: -0.0148 REMARK 3 S21: 0.1745 S22: -0.0525 S23: 0.3384 REMARK 3 S31: 0.1373 S32: -0.2534 S33: 0.0394 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 216 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1538 32.1998 9.1118 REMARK 3 T TENSOR REMARK 3 T11: 0.0695 T22: 0.0812 REMARK 3 T33: 0.0819 T12: -0.0045 REMARK 3 T13: 0.0006 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 0.2889 L22: 0.4239 REMARK 3 L33: 0.7634 L12: -0.2063 REMARK 3 L13: 0.2885 L23: -0.2812 REMARK 3 S TENSOR REMARK 3 S11: -0.0296 S12: -0.0668 S13: 0.0568 REMARK 3 S21: 0.0103 S22: 0.0133 S23: -0.0081 REMARK 3 S31: 0.0278 S32: -0.0662 S33: 0.0200 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 249 THROUGH 285 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2593 40.4820 11.0295 REMARK 3 T TENSOR REMARK 3 T11: 0.1165 T22: 0.0838 REMARK 3 T33: 0.1130 T12: -0.0056 REMARK 3 T13: -0.0065 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 0.3741 L22: 0.6577 REMARK 3 L33: 2.8819 L12: -0.0391 REMARK 3 L13: -0.0514 L23: -1.0926 REMARK 3 S TENSOR REMARK 3 S11: -0.0284 S12: -0.0508 S13: 0.0954 REMARK 3 S21: 0.1838 S22: -0.0337 S23: -0.0375 REMARK 3 S31: -0.2721 S32: 0.1116 S33: 0.0266 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 286 THROUGH 318 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.2282 15.4680 12.0293 REMARK 3 T TENSOR REMARK 3 T11: 0.1049 T22: 0.1391 REMARK 3 T33: 0.1111 T12: 0.0311 REMARK 3 T13: 0.0070 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.0311 L22: 0.1221 REMARK 3 L33: 0.5535 L12: -0.0687 REMARK 3 L13: -0.0444 L23: 0.0791 REMARK 3 S TENSOR REMARK 3 S11: -0.0621 S12: -0.0077 S13: -0.0000 REMARK 3 S21: 0.1007 S22: 0.0358 S23: 0.0380 REMARK 3 S31: 0.1704 S32: 0.2757 S33: 0.0108 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 319 THROUGH 346 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.5191 25.0978 4.2769 REMARK 3 T TENSOR REMARK 3 T11: 0.0882 T22: 0.1391 REMARK 3 T33: 0.1621 T12: 0.0110 REMARK 3 T13: -0.0077 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 1.3272 L22: 0.9504 REMARK 3 L33: 0.1284 L12: 0.3638 REMARK 3 L13: -0.2584 L23: -0.0583 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: -0.1270 S13: 0.0241 REMARK 3 S21: 0.1146 S22: 0.0525 S23: -0.2471 REMARK 3 S31: -0.0251 S32: 0.1991 S33: -0.0528 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4N6D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082808. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36699 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : 0.05300 REMARK 200 FOR THE DATA SET : 22.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.9 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : 0.23700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40 MG/ML PROTEIN IN 10 MM HEPES, PH REMARK 280 7.5, 5 MM DTT, 10 MM D-TRYPTOPHAN, RESERVOIR: 0.1 M TRI-SODIUM REMARK 280 CITRATE, PH 5.5, 20% W/V PEG3000, SOAK FOR 5 MINUTES IN 250 MM REMARK 280 IC3, 20% PEG3350, 100 MM HEPES, PH 7.0, 20% ETHYLENE GLYCOL, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.35150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.34350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.12450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.34350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.35150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.12450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 THR A 3 REMARK 465 GLY A 4 REMARK 465 LYS A 5 REMARK 465 THR A 6 REMARK 465 ALA A 7 REMARK 465 GLY A 8 REMARK 465 LEU A 9 REMARK 465 LEU A 10 REMARK 465 ALA A 11 REMARK 465 VAL A 12 REMARK 465 PHE A 13 REMARK 465 MET A 14 REMARK 465 LEU A 15 REMARK 465 CYS A 16 REMARK 465 ALA A 17 REMARK 465 ALA A 18 REMARK 465 LEU A 19 REMARK 465 PHE A 20 REMARK 465 SER A 21 REMARK 465 ALA A 22 REMARK 465 SER A 23 REMARK 465 VAL A 24 REMARK 465 VAL A 25 REMARK 465 SER A 26 REMARK 465 ALA A 27 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE22 GLN A 87 O HOH A 708 1.56 REMARK 500 O HOH A 708 O HOH A 801 1.95 REMARK 500 O HOH A 757 O HOH A 767 1.98 REMARK 500 OE1 GLU A 261 O HOH A 702 2.00 REMARK 500 O HOH A 712 O HOH A 798 2.06 REMARK 500 NH1 ARG A 333 O HOH A 593 2.10 REMARK 500 O HOH A 874 O HOH A 892 2.10 REMARK 500 O HOH A 760 O HOH A 891 2.13 REMARK 500 O HOH A 836 O HOH A 860 2.17 REMARK 500 O HOH A 764 O HOH A 857 2.19 REMARK 500 O HOH A 739 O HOH A 892 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 78 20.58 -146.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE I3C A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE I3C A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-510112 RELATED DB: TARGETTRACK DBREF 4N6D A 1 339 UNP C6C297 C6C297_DESAD 1 339 SEQADV 4N6D ALA A 340 UNP C6C297 EXPRESSION TAG SEQADV 4N6D GLU A 341 UNP C6C297 EXPRESSION TAG SEQADV 4N6D ASN A 342 UNP C6C297 EXPRESSION TAG SEQADV 4N6D LEU A 343 UNP C6C297 EXPRESSION TAG SEQADV 4N6D TYR A 344 UNP C6C297 EXPRESSION TAG SEQADV 4N6D PHE A 345 UNP C6C297 EXPRESSION TAG SEQADV 4N6D GLN A 346 UNP C6C297 EXPRESSION TAG SEQRES 1 A 346 MET ARG THR GLY LYS THR ALA GLY LEU LEU ALA VAL PHE SEQRES 2 A 346 MET LEU CYS ALA ALA LEU PHE SER ALA SER VAL VAL SER SEQRES 3 A 346 ALA ALA ASP ILE SER LEU SER TYR ALA ASN PHE PRO PRO SEQRES 4 A 346 ALA LYS THR PHE PRO CYS VAL GLN MET GLU ARG TRP LYS SEQRES 5 A 346 GLN GLU VAL GLU LYS ARG THR ALA GLY LYS VAL GLN VAL SEQRES 6 A 346 GLN THR TYR PRO GLY SER THR LEU LEU GLY ALA LYS ASN SEQRES 7 A 346 THR LEU ARG GLY VAL MET GLN GLY GLN ALA ASP ILE GLY SEQRES 8 A 346 CYS VAL SER LEU ALA TYR HIS PRO GLY VAL PHE PRO LEU SEQRES 9 A 346 SER SER VAL PHE GLU LEU PRO LEU GLY PHE THR SER SER SEQRES 10 A 346 THR SER ALA SER LEU ALA LEU TRP ASP LEU TYR THR LYS SEQRES 11 A 346 TYR GLN PRO LYS GLU PHE LYS ARG PHE LYS VAL LEU THR SEQRES 12 A 346 MET PHE ALA SER ALA PRO SER ASN ILE MET THR LYS VAL SEQRES 13 A 346 PRO VAL ARG ASN LEU ASP ASP LEU LYS GLY LEU GLU VAL SEQRES 14 A 346 ARG ALA SER GLY ILE LEU SER LYS ILE LEU GLU SER LEU SEQRES 15 A 346 GLY ALA THR PRO VAL SER MET PRO MET SER ALA THR PRO SEQRES 16 A 346 GLU ALA LEU GLN LYS GLY VAL VAL LYS GLY LEU PHE SER SEQRES 17 A 346 SER PHE GLU VAL LEU LYS ASP LEU ASN PHE ALA GLU ILE SEQRES 18 A 346 CYS ARG TYR GLU THR GLU THR ASN THR ALA VAL TYR PRO SEQRES 19 A 346 PHE ALA ILE ILE MET ASN MET ASN SER TRP ASN SER LEU SEQRES 20 A 346 PRO ASP ASP VAL LYS LYS VAL LEU ASN ASP LEU GLY ARG SEQRES 21 A 346 GLU GLN ALA GLU TRP THR GLY LYS TYR MET ASP GLU HIS SEQRES 22 A 346 VAL LYS ARG SER LEU ALA TRP ALA LYS ASP LYS TYR SER SEQRES 23 A 346 ILE GLU MET ILE LYS MET SER ASP ALA ASP MET GLN ALA SEQRES 24 A 346 ILE LYS ASP LYS THR LEU PRO LEU ILE GLU ASP TRP LYS SEQRES 25 A 346 GLU LYS ALA ALA ALA LYS GLY VAL ASP GLY ALA ALA VAL SEQRES 26 A 346 LEU SER ASP VAL GLU GLU LEU ARG ILE LYS TYR GLU GLY SEQRES 27 A 346 LYS ALA GLU ASN LEU TYR PHE GLN HET I3C A 401 16 HET I3C A 402 16 HET CL A 403 1 HET EDO A 404 10 HETNAM I3C 5-AMINO-2,4,6-TRIIODOBENZENE-1,3-DICARBOXYLIC ACID HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN I3C 5-AMINO-2,4,6-TRIIODOISOPHTHALIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 2 I3C 2(C8 H4 I3 N O4) FORMUL 4 CL CL 1- FORMUL 5 EDO C2 H6 O2 FORMUL 6 HOH *421(H2 O) HELIX 1 1 THR A 42 THR A 59 1 18 HELIX 2 2 ASN A 78 GLN A 85 1 8 HELIX 3 3 ALA A 96 HIS A 98 5 3 HELIX 4 4 LEU A 104 LEU A 110 5 7 HELIX 5 5 SER A 116 GLN A 132 1 17 HELIX 6 6 PRO A 133 LYS A 137 5 5 HELIX 7 7 ASN A 160 LYS A 165 5 6 HELIX 8 8 SER A 172 LEU A 182 1 11 HELIX 9 9 PRO A 190 SER A 192 5 3 HELIX 10 10 ALA A 193 LYS A 200 1 8 HELIX 11 11 GLU A 211 LEU A 216 1 6 HELIX 12 12 ASN A 217 ILE A 221 5 5 HELIX 13 13 MET A 241 SER A 246 1 6 HELIX 14 14 PRO A 248 SER A 286 1 39 HELIX 15 15 SER A 293 LYS A 318 1 26 HELIX 16 16 ASP A 321 GLY A 338 1 18 HELIX 17 17 ASN A 342 GLN A 346 5 5 SHEET 1 A 5 VAL A 63 TYR A 68 0 SHEET 2 A 5 ILE A 30 ALA A 35 1 N LEU A 32 O GLN A 66 SHEET 3 A 5 ILE A 90 SER A 94 1 O ILE A 90 N ALA A 35 SHEET 4 A 5 PRO A 234 ASN A 240 -1 O ALA A 236 N VAL A 93 SHEET 5 A 5 PHE A 139 ALA A 146 -1 N PHE A 145 O PHE A 235 SHEET 1 B 4 GLY A 205 SER A 208 0 SHEET 2 B 4 ASN A 151 THR A 154 -1 N ASN A 151 O SER A 208 SHEET 3 B 4 TYR A 224 THR A 226 -1 O THR A 226 N ILE A 152 SHEET 4 B 4 GLU A 288 ILE A 290 1 O ILE A 290 N GLU A 225 SHEET 1 C 2 GLU A 168 ARG A 170 0 SHEET 2 C 2 THR A 185 VAL A 187 1 O VAL A 187 N VAL A 169 SITE 1 AC1 9 ALA A 60 SER A 71 THR A 72 ARG A 260 SITE 2 AC1 9 TYR A 336 HOH A 716 HOH A 719 HOH A 742 SITE 3 AC1 9 HOH A 803 SITE 1 AC2 8 ARG A 81 ARG A 138 LYS A 282 ASP A 283 SITE 2 AC2 8 LYS A 303 HOH A 530 HOH A 732 HOH A 754 SITE 1 AC3 4 SER A 33 LYS A 57 GLN A 66 TYR A 68 SITE 1 AC4 7 PHE A 37 THR A 79 CYS A 92 SER A 94 SITE 2 AC4 7 HIS A 98 LEU A 343 HOH A 620 CRYST1 44.703 68.249 108.687 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022370 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014652 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009201 0.00000 MASTER 386 0 4 17 11 0 8 6 0 0 0 27 END