HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03-SEP-13 4MJG TITLE CRYSTAL STRUCTURE OF A DUF4853 FAMILY PROTEIN (ACTODO_00621) FROM TITLE 2 ACTINOMYCES ODONTOLYTICUS ATCC 17982 AT 2.65 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACTINOMYCES ODONTOLYTICUS; SOURCE 3 ORGANISM_TAXID: 411466; SOURCE 4 STRAIN: ATCC 17982; SOURCE 5 GENE: ACTODO_00621, ZP_02043769.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PF16145 FAMILY, DUF4853, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, UNKNOWN FUNCTION, STRUCTURAL GENOMICS UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 24-JAN-18 4MJG 1 JRNL REVDAT 3 15-NOV-17 4MJG 1 REMARK REVDAT 2 24-DEC-14 4MJG 1 TITLE REVDAT 1 16-OCT-13 4MJG 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (ACTODO_00621) JRNL TITL 2 FROM ACTINOMYCES ODONTOLYTICUS ATCC 17982 AT 2.65 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.7 REMARK 3 NUMBER OF REFLECTIONS : 15135 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 768 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1106 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.3840 REMARK 3 BIN FREE R VALUE SET COUNT : 68 REMARK 3 BIN FREE R VALUE : 0.4630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2696 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 7 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.57000 REMARK 3 B22 (A**2) : 1.57000 REMARK 3 B33 (A**2) : -5.11000 REMARK 3 B12 (A**2) : 1.57000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.589 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.320 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.262 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 27.395 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2788 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2594 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3813 ; 1.023 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5998 ; 0.782 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 352 ; 6.079 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 119 ;33.549 ;24.958 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 409 ;14.511 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;13.451 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 445 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3135 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 568 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1414 ; 4.491 ;10.800 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1413 ; 4.487 ;10.795 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1764 ; 7.081 ;20.221 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 34 A 210 REMARK 3 ORIGIN FOR THE GROUP (A): -37.2020 23.9980 32.1280 REMARK 3 T TENSOR REMARK 3 T11: 0.0973 T22: 0.0830 REMARK 3 T33: 0.1260 T12: 0.0072 REMARK 3 T13: 0.0098 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 2.5620 L22: 3.6211 REMARK 3 L33: 2.6828 L12: 0.9920 REMARK 3 L13: 0.2047 L23: -0.5453 REMARK 3 S TENSOR REMARK 3 S11: -0.0878 S12: -0.0494 S13: 0.0693 REMARK 3 S21: -0.0464 S22: -0.1151 S23: -0.3233 REMARK 3 S31: 0.0271 S32: 0.3732 S33: 0.2030 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 34 B 210 REMARK 3 ORIGIN FOR THE GROUP (A): -42.2240 50.5390 57.5970 REMARK 3 T TENSOR REMARK 3 T11: 0.1567 T22: 0.1255 REMARK 3 T33: 0.2002 T12: 0.1215 REMARK 3 T13: -0.0955 T23: -0.0754 REMARK 3 L TENSOR REMARK 3 L11: 5.2556 L22: 2.6145 REMARK 3 L33: 2.6959 L12: 1.2156 REMARK 3 L13: 0.3433 L23: -0.3449 REMARK 3 S TENSOR REMARK 3 S11: -0.1431 S12: -0.1681 S13: 0.2202 REMARK 3 S21: 0.0436 S22: 0.1883 S23: -0.0711 REMARK 3 S31: 0.0032 S32: 0.1180 S33: -0.0451 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORDS CONTAIN SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. 3. ANISOU RECORDS CONTAIN SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS REMARK 3 ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 6. CHLORIDE (CL),SULFATE (SO4) AND GLYCEROL (GOL) REMARK 3 MOLECULES FROM THE PURIFICATION/CRYSTALLIZATION/CRYOPROTECTION REMARK 3 SOLUTION ARE MODELED. 7. DUE TO STRONG ICE RINGS, REFLECTIONS REMARK 3 WERE OMITTED IN THE 3.91-3.86 AND 3.70-3.64 RESOLUTION SHELLS REMARK 3 LOWERING THE OVERALL COMPLETENESS TO 88.7%. THE NOMINAL REMARK 3 RESOLUTION OF THE RESULTING DATASET IS 2.80 A WITH 2358 OBSERVED REMARK 3 REFLECTIONS BETWEEN 2.80-2.65 (92.4% COMPLETE FOR THIS SHELL) REMARK 3 INCLUDED IN THE REFINEMENT. REMARK 4 REMARK 4 4MJG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000081986. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97941,0.97868 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15164 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 44.544 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.81100 REMARK 200 R SYM FOR SHELL (I) : 0.81100 REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4M AMMONIUM SULFATE, 0.1M BICINE PH REMARK 280 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.02933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 35.01467 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 35.01467 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 70.02933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A REMARK 300 MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 B 303 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ALA A 29 REMARK 465 LYS A 30 REMARK 465 SER A 31 REMARK 465 ARG A 32 REMARK 465 ASP A 33 REMARK 465 HIS A 211 REMARK 465 VAL A 212 REMARK 465 THR A 213 REMARK 465 PRO A 214 REMARK 465 GLN A 215 REMARK 465 SER A 216 REMARK 465 GLY A 217 REMARK 465 THR A 218 REMARK 465 GLN A 219 REMARK 465 SER A 220 REMARK 465 GLY A 221 REMARK 465 THR A 222 REMARK 465 GLN A 223 REMARK 465 SER A 224 REMARK 465 GLY A 225 REMARK 465 SER A 226 REMARK 465 GLY B 0 REMARK 465 ALA B 29 REMARK 465 LYS B 30 REMARK 465 SER B 31 REMARK 465 ARG B 32 REMARK 465 ASP B 33 REMARK 465 HIS B 211 REMARK 465 VAL B 212 REMARK 465 THR B 213 REMARK 465 PRO B 214 REMARK 465 GLN B 215 REMARK 465 SER B 216 REMARK 465 GLY B 217 REMARK 465 THR B 218 REMARK 465 GLN B 219 REMARK 465 SER B 220 REMARK 465 GLY B 221 REMARK 465 THR B 222 REMARK 465 GLN B 223 REMARK 465 SER B 224 REMARK 465 GLY B 225 REMARK 465 SER B 226 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 106 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 35 41.85 -107.07 REMARK 500 ASP A 172 66.42 -155.92 REMARK 500 PRO A 198 56.16 -63.99 REMARK 500 LEU A 200 -178.26 69.99 REMARK 500 GLU B 35 42.46 -107.04 REMARK 500 ASP B 172 66.90 -155.50 REMARK 500 LEU B 200 161.24 75.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 306 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-418621 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 29-226 OF THE TARGET REMARK 999 SEQUENCE. DBREF 4MJG A 29 226 UNP A7BAF7 A7BAF7_9ACTO 29 226 DBREF 4MJG B 29 226 UNP A7BAF7 A7BAF7_9ACTO 29 226 SEQADV 4MJG GLY A 0 UNP A7BAF7 LEADER SEQUENCE SEQADV 4MJG GLY B 0 UNP A7BAF7 LEADER SEQUENCE SEQRES 1 A 199 GLY ALA LYS SER ARG ASP ALA GLU PHE VAL PRO PHE PRO SEQRES 2 A 199 GLU ARG VAL SER ILE GLU GLU TYR ILE SER ARG GLN LEU SEQRES 3 A 199 PRO GLU ILE SER SER VAL ALA VAL PRO VAL ALA ALA GLU SEQRES 4 A 199 THR GLY GLY GLU LEU THR VAL MSE GLY LEU PRO TYR VAL SEQRES 5 A 199 GLN VAL CYS GLY THR GLY ASP THR GLN GLY TYR ARG VAL SEQRES 6 A 199 VAL GLY TYR THR THR VAL ALA PRO SER MSE SER PHE GLU SEQRES 7 A 199 ARG LEU GLU LYS LEU VAL THR GLU ASN LYS PRO ASP TRP SEQRES 8 A 199 ALA VAL ALA VAL GLN VAL ASP LYS GLN ILE ASP ARG ASP SEQRES 9 A 199 ALA THR ARG GLY ILE GLN LEU ILE ASP ASN TYR GLY GLY SEQRES 10 A 199 LEU VAL GLU PHE LYS PHE SER GLU ASP SER ILE ALA VAL SEQRES 11 A 199 ARG SER ARG SER ALA CYS LEU PRO THR ASN LYS PRO LEU SEQRES 12 A 199 ASP ASP PRO GLY GLN PHE VAL LEU PRO SER VAL GLU GLU SEQRES 13 A 199 ALA PHE PRO GLY MSE HIS VAL THR ILE SER ASP ASN THR SEQRES 14 A 199 ASN PRO ASP LEU HIS PRO VAL PRO THR LEU THR THR GLY SEQRES 15 A 199 ALA HIS VAL THR PRO GLN SER GLY THR GLN SER GLY THR SEQRES 16 A 199 GLN SER GLY SER SEQRES 1 B 199 GLY ALA LYS SER ARG ASP ALA GLU PHE VAL PRO PHE PRO SEQRES 2 B 199 GLU ARG VAL SER ILE GLU GLU TYR ILE SER ARG GLN LEU SEQRES 3 B 199 PRO GLU ILE SER SER VAL ALA VAL PRO VAL ALA ALA GLU SEQRES 4 B 199 THR GLY GLY GLU LEU THR VAL MSE GLY LEU PRO TYR VAL SEQRES 5 B 199 GLN VAL CYS GLY THR GLY ASP THR GLN GLY TYR ARG VAL SEQRES 6 B 199 VAL GLY TYR THR THR VAL ALA PRO SER MSE SER PHE GLU SEQRES 7 B 199 ARG LEU GLU LYS LEU VAL THR GLU ASN LYS PRO ASP TRP SEQRES 8 B 199 ALA VAL ALA VAL GLN VAL ASP LYS GLN ILE ASP ARG ASP SEQRES 9 B 199 ALA THR ARG GLY ILE GLN LEU ILE ASP ASN TYR GLY GLY SEQRES 10 B 199 LEU VAL GLU PHE LYS PHE SER GLU ASP SER ILE ALA VAL SEQRES 11 B 199 ARG SER ARG SER ALA CYS LEU PRO THR ASN LYS PRO LEU SEQRES 12 B 199 ASP ASP PRO GLY GLN PHE VAL LEU PRO SER VAL GLU GLU SEQRES 13 B 199 ALA PHE PRO GLY MSE HIS VAL THR ILE SER ASP ASN THR SEQRES 14 B 199 ASN PRO ASP LEU HIS PRO VAL PRO THR LEU THR THR GLY SEQRES 15 B 199 ALA HIS VAL THR PRO GLN SER GLY THR GLN SER GLY THR SEQRES 16 B 199 GLN SER GLY SER MODRES 4MJG MSE A 74 MET SELENOMETHIONINE MODRES 4MJG MSE A 102 MET SELENOMETHIONINE MODRES 4MJG MSE A 188 MET SELENOMETHIONINE MODRES 4MJG MSE B 74 MET SELENOMETHIONINE MODRES 4MJG MSE B 102 MET SELENOMETHIONINE MODRES 4MJG MSE B 188 MET SELENOMETHIONINE HET MSE A 74 8 HET MSE A 102 8 HET MSE A 188 8 HET MSE B 74 8 HET MSE B 102 8 HET MSE B 188 8 HET SO4 A 301 5 HET SO4 A 302 5 HET GOL A 303 6 HET SO4 B 301 5 HET SO4 B 302 5 HET SO4 B 303 5 HET CL B 304 1 HET CL B 305 1 HET GOL B 306 6 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 SO4 5(O4 S 2-) FORMUL 5 GOL 2(C3 H8 O3) FORMUL 9 CL 2(CL 1-) FORMUL 12 HOH *7(H2 O) HELIX 1 1 PRO A 38 ARG A 42 5 5 HELIX 2 2 SER A 44 GLN A 52 1 9 HELIX 3 3 GLN A 52 VAL A 59 1 8 HELIX 4 4 ALA A 60 GLY A 68 1 9 HELIX 5 5 THR A 84 GLN A 88 5 5 HELIX 6 6 SER A 103 ASN A 114 1 12 HELIX 7 7 ASP A 172 PHE A 176 5 5 HELIX 8 8 SER A 180 PHE A 185 1 6 HELIX 9 9 PRO B 38 ARG B 42 5 5 HELIX 10 10 SER B 44 GLN B 52 1 9 HELIX 11 11 GLN B 52 VAL B 59 1 8 HELIX 12 12 ALA B 60 GLY B 68 1 9 HELIX 13 13 THR B 84 GLN B 88 5 5 HELIX 14 14 SER B 103 ASN B 114 1 12 HELIX 15 15 ASP B 172 PHE B 176 5 5 HELIX 16 16 SER B 180 PHE B 185 1 6 SHEET 1 A 8 ALA A 119 VAL A 124 0 SHEET 2 A 8 ARG A 134 ASP A 140 -1 O GLN A 137 N GLN A 123 SHEET 3 A 8 LEU A 145 PHE A 150 -1 O PHE A 150 N ARG A 134 SHEET 4 A 8 SER A 154 ARG A 160 -1 O ARG A 158 N GLU A 147 SHEET 5 A 8 THR A 96 PRO A 100 -1 N THR A 97 O VAL A 157 SHEET 6 A 8 LEU A 71 GLY A 75 -1 N THR A 72 O VAL A 98 SHEET 7 A 8 VAL A 203 THR A 208 -1 O LEU A 206 N LEU A 71 SHEET 8 A 8 MSE A 188 SER A 193 -1 N THR A 191 O THR A 205 SHEET 1 B 2 TYR A 78 CYS A 82 0 SHEET 2 B 2 GLY A 89 VAL A 93 -1 O ARG A 91 N GLN A 80 SHEET 1 C 8 ALA B 119 VAL B 124 0 SHEET 2 C 8 ARG B 134 ASP B 140 -1 O GLN B 137 N GLN B 123 SHEET 3 C 8 LEU B 145 PHE B 150 -1 O PHE B 150 N ARG B 134 SHEET 4 C 8 SER B 154 ARG B 160 -1 O ALA B 156 N LYS B 149 SHEET 5 C 8 THR B 96 PRO B 100 -1 N THR B 97 O VAL B 157 SHEET 6 C 8 LEU B 71 GLY B 75 -1 N THR B 72 O VAL B 98 SHEET 7 C 8 VAL B 203 THR B 208 -1 O LEU B 206 N LEU B 71 SHEET 8 C 8 MSE B 188 SER B 193 -1 N THR B 191 O THR B 205 SHEET 1 D 2 TYR B 78 CYS B 82 0 SHEET 2 D 2 GLY B 89 VAL B 93 -1 O ARG B 91 N GLN B 80 SSBOND 1 CYS A 82 CYS A 163 1555 1555 2.05 SSBOND 2 CYS B 82 CYS B 163 1555 1555 2.04 LINK C VAL A 73 N MSE A 74 1555 1555 1.33 LINK C MSE A 74 N GLY A 75 1555 1555 1.33 LINK C SER A 101 N MSE A 102 1555 1555 1.33 LINK C MSE A 102 N SER A 103 1555 1555 1.33 LINK C GLY A 187 N MSE A 188 1555 1555 1.33 LINK C MSE A 188 N HIS A 189 1555 1555 1.33 LINK C VAL B 73 N MSE B 74 1555 1555 1.33 LINK C MSE B 74 N GLY B 75 1555 1555 1.33 LINK C SER B 101 N MSE B 102 1555 1555 1.33 LINK C MSE B 102 N SER B 103 1555 1555 1.33 LINK C GLY B 187 N MSE B 188 1555 1555 1.33 LINK C MSE B 188 N HIS B 189 1555 1555 1.34 SITE 1 AC1 4 ARG A 42 ARG A 91 ALA A 162 CYS A 163 SITE 1 AC2 6 GLN A 80 ARG A 158 ARG A 160 GLU B 66 SITE 2 AC2 6 THR B 67 ARG B 106 SITE 1 AC3 6 TYR A 48 GLN A 52 ILE A 56 ASP A 140 SITE 2 AC3 6 ASN A 141 TYR A 142 SITE 1 AC4 5 CYS A 82 GLY A 83 ARG A 91 SER B 103 SITE 2 AC4 5 ARG B 106 SITE 1 AC5 4 ARG B 42 ARG B 91 ALA B 162 CYS B 163 SITE 1 AC6 4 ASP B 129 ARG B 130 ALA B 132 HOH B 402 SITE 1 AC7 1 ARG B 134 SITE 1 AC8 1 ARG B 91 SITE 1 AC9 4 GLN B 52 ASP B 140 ASN B 141 TYR B 142 CRYST1 97.080 97.080 105.044 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010301 0.005947 0.000000 0.00000 SCALE2 0.000000 0.011894 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009520 0.00000 MASTER 439 0 15 16 20 0 12 6 0 0 0 32 END