HEADER TRANSFERASE 20-MAY-13 4KT7 TITLE THE CRYSTAL STRUCTURE OF 4-DIPHOSPHOCYTIDYL-2C-METHYL-D- TITLE 2 ERYTHRITOLSYNTHASE FROM ANAEROCOCCUS PREVOTII DSM 20548 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL SYNTHASE, MEP COMPND 5 CYTIDYLYLTRANSFERASE; COMPND 6 EC: 2.7.7.60; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANAEROCOCCUS PREVOTII; SOURCE 3 ORGANISM_COMMON: PEPTOSTREPTOCOCCUS PREVOTII; SOURCE 4 ORGANISM_TAXID: 525919; SOURCE 5 STRAIN: DSM 20548; SOURCE 6 GENE: APRE_0175, ISPD; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.BOREK,K.TAN,L.STOLS,W.H.ESCHENFEIDT,Z.OTWINOSKI,A.JOACHIMIAK, AUTHOR 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 2 17-JUL-19 4KT7 1 REMARK LINK REVDAT 1 05-JUN-13 4KT7 0 JRNL AUTH D.BOREK,K.TAN,L.STOLS,W.H.ESCHENFEIDT,Z.OTWINOSKI, JRNL AUTH 2 A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF JRNL TITL 2 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOLSYNTHASE FROM JRNL TITL 3 ANAEROCOCCUS PREVOTII DSM 20548 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 3 NUMBER OF REFLECTIONS : 29845 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1494 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.6149 - 4.4479 0.99 3026 159 0.1761 0.1951 REMARK 3 2 4.4479 - 3.5317 1.00 2888 143 0.1530 0.2206 REMARK 3 3 3.5317 - 3.0856 1.00 2811 159 0.1678 0.2051 REMARK 3 4 3.0856 - 2.8037 1.00 2821 152 0.1939 0.2783 REMARK 3 5 2.8037 - 2.6028 1.00 2801 158 0.2005 0.2427 REMARK 3 6 2.6028 - 2.4494 1.00 2798 137 0.1925 0.2253 REMARK 3 7 2.4494 - 2.3267 0.99 2800 133 0.1957 0.2508 REMARK 3 8 2.3267 - 2.2255 0.96 2686 148 0.2042 0.2542 REMARK 3 9 2.2255 - 2.1398 0.87 2382 121 0.2121 0.2890 REMARK 3 10 2.1398 - 2.0660 0.71 1960 109 0.2057 0.2643 REMARK 3 11 2.0660 - 2.0014 0.50 1378 75 0.2159 0.2515 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.13000 REMARK 3 B22 (A**2) : 0.79000 REMARK 3 B33 (A**2) : -0.65000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3699 REMARK 3 ANGLE : 1.082 4993 REMARK 3 CHIRALITY : 0.078 578 REMARK 3 PLANARITY : 0.003 635 REMARK 3 DIHEDRAL : 14.082 1402 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.0681 -19.0568 16.5456 REMARK 3 T TENSOR REMARK 3 T11: 0.4162 T22: 0.2564 REMARK 3 T33: 0.2139 T12: 0.0924 REMARK 3 T13: 0.0236 T23: 0.0490 REMARK 3 L TENSOR REMARK 3 L11: 4.4342 L22: 1.3341 REMARK 3 L33: 3.2371 L12: -0.5080 REMARK 3 L13: -0.6596 L23: 1.1660 REMARK 3 S TENSOR REMARK 3 S11: -0.1869 S12: -0.8759 S13: -0.1498 REMARK 3 S21: 0.8856 S22: -0.0683 S23: 0.0160 REMARK 3 S31: -0.3108 S32: 0.2460 S33: 0.1431 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.8178 -4.3928 1.5750 REMARK 3 T TENSOR REMARK 3 T11: 0.4353 T22: 1.0314 REMARK 3 T33: 0.8126 T12: -0.1751 REMARK 3 T13: 0.1586 T23: 0.1581 REMARK 3 L TENSOR REMARK 3 L11: 6.0135 L22: 6.5167 REMARK 3 L33: 1.5141 L12: 2.3662 REMARK 3 L13: -0.9174 L23: 2.4229 REMARK 3 S TENSOR REMARK 3 S11: 0.1831 S12: 0.8442 S13: 0.1459 REMARK 3 S21: -0.8540 S22: 0.5287 S23: -0.2337 REMARK 3 S31: -1.1642 S32: 0.4016 S33: -0.7236 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.5157 -14.9452 6.5832 REMARK 3 T TENSOR REMARK 3 T11: 0.1533 T22: 0.4911 REMARK 3 T33: 0.3646 T12: 0.0481 REMARK 3 T13: -0.0144 T23: 0.0374 REMARK 3 L TENSOR REMARK 3 L11: 2.9559 L22: 2.1165 REMARK 3 L33: 0.8246 L12: 0.9883 REMARK 3 L13: -0.2405 L23: -0.0335 REMARK 3 S TENSOR REMARK 3 S11: 0.2669 S12: -0.0090 S13: -0.3192 REMARK 3 S21: 0.0494 S22: -0.2308 S23: -0.5477 REMARK 3 S31: 0.1320 S32: 0.9927 S33: -0.0757 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 72 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.0491 -17.3416 4.0557 REMARK 3 T TENSOR REMARK 3 T11: 0.1312 T22: 0.2773 REMARK 3 T33: 0.1894 T12: 0.0173 REMARK 3 T13: -0.0007 T23: 0.0285 REMARK 3 L TENSOR REMARK 3 L11: 2.8987 L22: 2.9990 REMARK 3 L33: 2.2843 L12: 0.7444 REMARK 3 L13: -0.2270 L23: 0.9658 REMARK 3 S TENSOR REMARK 3 S11: 0.0610 S12: 0.0211 S13: -0.3900 REMARK 3 S21: 0.2136 S22: -0.1498 S23: -0.2306 REMARK 3 S31: 0.3628 S32: 0.6956 S33: 0.0323 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2511 -1.5601 14.9726 REMARK 3 T TENSOR REMARK 3 T11: 0.1140 T22: 0.1560 REMARK 3 T33: 0.0833 T12: -0.0413 REMARK 3 T13: -0.0347 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 1.7851 L22: 1.5475 REMARK 3 L33: 0.9333 L12: -0.4264 REMARK 3 L13: 0.1667 L23: -0.1899 REMARK 3 S TENSOR REMARK 3 S11: -0.0399 S12: -0.2041 S13: 0.0074 REMARK 3 S21: 0.3660 S22: -0.0653 S23: -0.2312 REMARK 3 S31: -0.1313 S32: 0.1783 S33: 0.0735 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0414 10.9010 10.2566 REMARK 3 T TENSOR REMARK 3 T11: 0.2027 T22: 0.1444 REMARK 3 T33: 0.2329 T12: -0.0448 REMARK 3 T13: -0.0210 T23: -0.0712 REMARK 3 L TENSOR REMARK 3 L11: 2.5171 L22: 3.8209 REMARK 3 L33: 0.7450 L12: -2.4319 REMARK 3 L13: 0.0121 L23: -1.0851 REMARK 3 S TENSOR REMARK 3 S11: 0.0953 S12: 0.0805 S13: 0.0796 REMARK 3 S21: 0.2339 S22: -0.1894 S23: 0.2884 REMARK 3 S31: -0.1752 S32: 0.0208 S33: 0.0999 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 166 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7211 -10.7880 3.1419 REMARK 3 T TENSOR REMARK 3 T11: 0.1409 T22: 0.2024 REMARK 3 T33: 0.1301 T12: -0.0186 REMARK 3 T13: 0.0071 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 3.7236 L22: 3.2548 REMARK 3 L33: 3.1294 L12: -0.9779 REMARK 3 L13: 0.4283 L23: 1.7741 REMARK 3 S TENSOR REMARK 3 S11: 0.1136 S12: 0.2794 S13: 0.0997 REMARK 3 S21: -0.1607 S22: -0.2834 S23: 0.3482 REMARK 3 S31: -0.0889 S32: -0.2508 S33: 0.1525 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 197 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1635 -2.8564 12.2480 REMARK 3 T TENSOR REMARK 3 T11: 0.1867 T22: 0.2041 REMARK 3 T33: 0.1957 T12: -0.1232 REMARK 3 T13: -0.0399 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 2.1374 L22: 1.5877 REMARK 3 L33: 1.0641 L12: 0.4230 REMARK 3 L13: 0.4974 L23: 0.1913 REMARK 3 S TENSOR REMARK 3 S11: -0.2530 S12: -0.0760 S13: -0.0743 REMARK 3 S21: -0.1011 S22: -0.0210 S23: -0.0447 REMARK 3 S31: -0.4785 S32: 0.0942 S33: 0.1047 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 218 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.8076 6.5216 10.1730 REMARK 3 T TENSOR REMARK 3 T11: 0.6439 T22: 0.6269 REMARK 3 T33: 0.5933 T12: -0.3479 REMARK 3 T13: 0.0223 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 6.4007 L22: 5.6496 REMARK 3 L33: 8.3418 L12: 0.6157 REMARK 3 L13: -0.8061 L23: -0.7837 REMARK 3 S TENSOR REMARK 3 S11: -0.3391 S12: -0.3894 S13: 0.1580 REMARK 3 S21: -0.3306 S22: 0.1098 S23: -0.8284 REMARK 3 S31: -1.2276 S32: 0.7469 S33: 0.2184 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.1060 31.9426 11.5034 REMARK 3 T TENSOR REMARK 3 T11: 0.4882 T22: 0.3655 REMARK 3 T33: 0.3541 T12: -0.0454 REMARK 3 T13: -0.0686 T23: -0.1197 REMARK 3 L TENSOR REMARK 3 L11: 3.4922 L22: 3.9856 REMARK 3 L33: 1.8038 L12: -0.4119 REMARK 3 L13: -2.0536 L23: 0.8741 REMARK 3 S TENSOR REMARK 3 S11: -0.1253 S12: 0.0527 S13: 0.1183 REMARK 3 S21: -0.1209 S22: 0.2742 S23: -0.8254 REMARK 3 S31: -0.3423 S32: 1.1455 S33: -0.2300 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 36 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9555 36.3461 12.2301 REMARK 3 T TENSOR REMARK 3 T11: 0.5060 T22: 0.4052 REMARK 3 T33: 0.5102 T12: -0.4253 REMARK 3 T13: 0.0046 T23: -0.2273 REMARK 3 L TENSOR REMARK 3 L11: 2.6899 L22: 2.6337 REMARK 3 L33: 2.3140 L12: -0.9244 REMARK 3 L13: -1.1863 L23: -1.6066 REMARK 3 S TENSOR REMARK 3 S11: -0.2305 S12: -0.5117 S13: 0.5227 REMARK 3 S21: -0.1435 S22: 0.5965 S23: -0.9556 REMARK 3 S31: -1.1564 S32: 1.1422 S33: 0.3143 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 72 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3347 37.5678 14.9647 REMARK 3 T TENSOR REMARK 3 T11: 0.5642 T22: 0.1234 REMARK 3 T33: 0.3243 T12: -0.0598 REMARK 3 T13: -0.0207 T23: -0.0422 REMARK 3 L TENSOR REMARK 3 L11: 2.6263 L22: 2.8184 REMARK 3 L33: 2.9221 L12: -0.6692 REMARK 3 L13: -0.0373 L23: 0.8516 REMARK 3 S TENSOR REMARK 3 S11: 0.1864 S12: -0.2201 S13: 0.5441 REMARK 3 S21: -0.1200 S22: 0.0063 S23: -0.2069 REMARK 3 S31: -0.9547 S32: 0.2635 S33: -0.0267 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 108 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8641 16.6482 5.6356 REMARK 3 T TENSOR REMARK 3 T11: 0.1245 T22: 0.1092 REMARK 3 T33: 0.1001 T12: -0.0039 REMARK 3 T13: -0.0256 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 1.2095 L22: 3.2044 REMARK 3 L33: 2.0479 L12: 0.7065 REMARK 3 L13: 0.0869 L23: 0.2453 REMARK 3 S TENSOR REMARK 3 S11: -0.1788 S12: 0.1559 S13: 0.0221 REMARK 3 S21: -0.3103 S22: 0.1644 S23: -0.0426 REMARK 3 S31: -0.2168 S32: -0.0815 S33: -0.0337 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 166 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5202 27.0347 12.1319 REMARK 3 T TENSOR REMARK 3 T11: 0.2632 T22: 0.2114 REMARK 3 T33: 0.2552 T12: 0.0321 REMARK 3 T13: 0.0149 T23: -0.0499 REMARK 3 L TENSOR REMARK 3 L11: 2.3787 L22: 3.3377 REMARK 3 L33: 4.4498 L12: -0.0320 REMARK 3 L13: -0.8926 L23: 1.9149 REMARK 3 S TENSOR REMARK 3 S11: -0.0627 S12: -0.1648 S13: 0.0546 REMARK 3 S21: 0.3015 S22: -0.2562 S23: 0.5025 REMARK 3 S31: -0.2482 S32: -0.5822 S33: 0.2471 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 218 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.5089 16.4053 7.6573 REMARK 3 T TENSOR REMARK 3 T11: 0.3176 T22: 0.8245 REMARK 3 T33: 0.5361 T12: 0.1727 REMARK 3 T13: -0.0681 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 5.4735 L22: 6.5302 REMARK 3 L33: 3.0965 L12: 0.0017 REMARK 3 L13: -0.1973 L23: 1.4908 REMARK 3 S TENSOR REMARK 3 S11: -0.0808 S12: 0.7589 S13: 0.1212 REMARK 3 S21: 0.3636 S22: 0.2357 S23: -1.2620 REMARK 3 S31: 0.1588 S32: 0.7204 S33: -0.1049 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: A REMARK 3 SELECTION : B REMARK 3 ATOM PAIRS NUMBER : 7934 REMARK 3 RMSD : 0.11 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4KT7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1000079764. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32747 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 75.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.71000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, HKL-3000, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.0 SODIUM CHLORIDE, 0.1M BIS-TRISHCL, REMARK 280 PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.92900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 72.75450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.92900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 72.75450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: EXPERIMENTALLY UNKNOWN. THE CHAINS A AND B IS PREDICTED TO REMARK 300 FORM A DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA B 301 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 465 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 21 REMARK 465 SER A 22 REMARK 465 LYS A 23 REMARK 465 ILE A 24 REMARK 465 ASN A 25 REMARK 465 LYS A 26 REMARK 465 LYS A 231 REMARK 465 LYS A 232 REMARK 465 ASP A 233 REMARK 465 VAL A 234 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 ILE B 2 REMARK 465 MSE B 20 REMARK 465 ARG B 21 REMARK 465 SER B 22 REMARK 465 LYS B 23 REMARK 465 ILE B 24 REMARK 465 ASN B 25 REMARK 465 LYS B 26 REMARK 465 PRO B 27 REMARK 465 TYR B 28 REMARK 465 LYS B 231 REMARK 465 LYS B 232 REMARK 465 ASP B 233 REMARK 465 VAL B 234 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 3 18.50 55.10 REMARK 500 SER A 82 -146.84 -130.58 REMARK 500 ARG A 110 77.99 -114.89 REMARK 500 GLN A 163 -154.34 -136.71 REMARK 500 SER B 82 -153.06 -138.77 REMARK 500 GLN B 163 -149.20 -137.32 REMARK 500 PHE B 197 41.87 -108.60 REMARK 500 ASP B 198 57.64 36.15 REMARK 500 THR B 216 -51.33 -124.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 466 O REMARK 620 2 ASP B 151 OD1 72.7 REMARK 620 3 HOH B 465 O 147.6 95.9 REMARK 620 4 HOH B 451 O 130.7 89.1 77.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC100369 RELATED DB: TARGETTRACK DBREF 4KT7 A 1 234 UNP C7RFG6 C7RFG6_ANAPD 1 234 DBREF 4KT7 B 1 234 UNP C7RFG6 C7RFG6_ANAPD 1 234 SEQADV 4KT7 SER A -2 UNP C7RFG6 EXPRESSION TAG SEQADV 4KT7 ASN A -1 UNP C7RFG6 EXPRESSION TAG SEQADV 4KT7 ALA A 0 UNP C7RFG6 EXPRESSION TAG SEQADV 4KT7 SER B -2 UNP C7RFG6 EXPRESSION TAG SEQADV 4KT7 ASN B -1 UNP C7RFG6 EXPRESSION TAG SEQADV 4KT7 ALA B 0 UNP C7RFG6 EXPRESSION TAG SEQRES 1 A 237 SER ASN ALA MSE ILE ASP GLY LYS PHE ILE SER ALA ILE SEQRES 2 A 237 ILE THR ALA ALA GLY SER GLY LEU ARG MSE ARG SER LYS SEQRES 3 A 237 ILE ASN LYS PRO TYR ILE GLU VAL GLY GLY ARG LYS VAL SEQRES 4 A 237 LEU GLU ILE THR LEU ASP THR VAL SER ARG VAL LYS GLU SEQRES 5 A 237 ILE ASP GLU ILE ILE LEU VAL ILE ARG LYS ASP ASP GLU SEQRES 6 A 237 ASP ILE ILE LYS ASP ILE LEU GLU LYS TYR ASP GLY ASN SEQRES 7 A 237 ILE ARG TYR VAL TYR GLY SER THR THR ARG GLU LEU SER SEQRES 8 A 237 THR PHE GLU GLY LEU LYS ALA LEU ASP PRO GLN SER GLU SEQRES 9 A 237 LEU VAL LEU THR HIS ASP GLY VAL ARG PRO PHE ALA SER SEQRES 10 A 237 GLU GLU LEU PHE LEU LYS THR ILE ASN ALA LEU ARG LYS SEQRES 11 A 237 ASN LYS ALA VAL ILE THR ALA THR LYS SER LYS ASP THR SEQRES 12 A 237 VAL LYS ILE ILE ASP ASP ASP MSE TYR VAL ASP PHE THR SEQRES 13 A 237 PRO ASN ARG ASP TYR VAL TYR ASN ILE GLN THR PRO GLN SEQRES 14 A 237 ALA PHE ASP LYS LYS LEU ILE TYR ALA MSE TYR GLU LYS SEQRES 15 A 237 TYR LEU ALA SER GLU PHE LYS VAL THR ASP ASP SER GLN SEQRES 16 A 237 LEU PHE GLU PHE PHE ASP ARG ASP GLU LYS VAL LYS VAL SEQRES 17 A 237 VAL HIS GLY GLU TYR SER ASN ILE LYS ILE THR THR GLN SEQRES 18 A 237 GLU ASP ILE ILE PHE ALA ASN ALA TYR LEU GLN ARG LYS SEQRES 19 A 237 LYS ASP VAL SEQRES 1 B 237 SER ASN ALA MSE ILE ASP GLY LYS PHE ILE SER ALA ILE SEQRES 2 B 237 ILE THR ALA ALA GLY SER GLY LEU ARG MSE ARG SER LYS SEQRES 3 B 237 ILE ASN LYS PRO TYR ILE GLU VAL GLY GLY ARG LYS VAL SEQRES 4 B 237 LEU GLU ILE THR LEU ASP THR VAL SER ARG VAL LYS GLU SEQRES 5 B 237 ILE ASP GLU ILE ILE LEU VAL ILE ARG LYS ASP ASP GLU SEQRES 6 B 237 ASP ILE ILE LYS ASP ILE LEU GLU LYS TYR ASP GLY ASN SEQRES 7 B 237 ILE ARG TYR VAL TYR GLY SER THR THR ARG GLU LEU SER SEQRES 8 B 237 THR PHE GLU GLY LEU LYS ALA LEU ASP PRO GLN SER GLU SEQRES 9 B 237 LEU VAL LEU THR HIS ASP GLY VAL ARG PRO PHE ALA SER SEQRES 10 B 237 GLU GLU LEU PHE LEU LYS THR ILE ASN ALA LEU ARG LYS SEQRES 11 B 237 ASN LYS ALA VAL ILE THR ALA THR LYS SER LYS ASP THR SEQRES 12 B 237 VAL LYS ILE ILE ASP ASP ASP MSE TYR VAL ASP PHE THR SEQRES 13 B 237 PRO ASN ARG ASP TYR VAL TYR ASN ILE GLN THR PRO GLN SEQRES 14 B 237 ALA PHE ASP LYS LYS LEU ILE TYR ALA MSE TYR GLU LYS SEQRES 15 B 237 TYR LEU ALA SER GLU PHE LYS VAL THR ASP ASP SER GLN SEQRES 16 B 237 LEU PHE GLU PHE PHE ASP ARG ASP GLU LYS VAL LYS VAL SEQRES 17 B 237 VAL HIS GLY GLU TYR SER ASN ILE LYS ILE THR THR GLN SEQRES 18 B 237 GLU ASP ILE ILE PHE ALA ASN ALA TYR LEU GLN ARG LYS SEQRES 19 B 237 LYS ASP VAL MODRES 4KT7 MSE A 1 MET SELENOMETHIONINE MODRES 4KT7 MSE A 20 MET SELENOMETHIONINE MODRES 4KT7 MSE A 148 MET SELENOMETHIONINE MODRES 4KT7 MSE A 176 MET SELENOMETHIONINE MODRES 4KT7 MSE B 148 MET SELENOMETHIONINE MODRES 4KT7 MSE B 176 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 20 8 HET MSE A 148 8 HET MSE A 176 8 HET MSE B 148 8 HET MSE B 176 8 HET CL A 301 1 HET NA B 301 1 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 CL CL 1- FORMUL 4 NA NA 1+ FORMUL 5 HOH *250(H2 O) HELIX 1 1 ASN A -1 ASP A 3 5 5 HELIX 2 2 VAL A 36 ARG A 46 1 11 HELIX 3 3 ASP A 61 LYS A 71 1 11 HELIX 4 4 THR A 84 ALA A 95 1 12 HELIX 5 5 SER A 114 LEU A 125 1 12 HELIX 6 6 ASN A 155 ASP A 157 5 3 HELIX 7 7 LYS A 170 ALA A 182 1 13 HELIX 8 8 ASP A 189 SER A 191 5 3 HELIX 9 9 GLN A 192 PHE A 197 1 6 HELIX 10 10 THR A 217 GLN A 229 1 13 HELIX 11 11 VAL B 36 VAL B 47 1 12 HELIX 12 12 ASP B 61 LEU B 69 1 9 HELIX 13 13 GLU B 70 TYR B 72 5 3 HELIX 14 14 THR B 84 LEU B 96 1 13 HELIX 15 15 SER B 114 ALA B 124 1 11 HELIX 16 16 LEU B 125 LYS B 127 5 3 HELIX 17 17 ASN B 155 ASP B 157 5 3 HELIX 18 18 LYS B 170 ALA B 182 1 13 HELIX 19 19 ASP B 189 SER B 191 5 3 HELIX 20 20 GLN B 192 PHE B 197 1 6 HELIX 21 21 THR B 217 ARG B 230 1 14 SHEET 1 A 7 ILE A 76 TYR A 80 0 SHEET 2 A 7 GLU A 52 ILE A 57 1 N LEU A 55 O ARG A 77 SHEET 3 A 7 ILE A 7 ALA A 13 1 N ALA A 9 O ILE A 54 SHEET 4 A 7 LEU A 102 ASP A 107 1 O LEU A 102 N SER A 8 SHEET 5 A 7 VAL A 159 ASP A 169 -1 O GLN A 166 N THR A 105 SHEET 6 A 7 ALA A 130 LYS A 136 -1 N THR A 135 O ASN A 161 SHEET 7 A 7 VAL A 203 HIS A 207 1 O LYS A 204 N ILE A 132 SHEET 1 B 7 ILE A 76 TYR A 80 0 SHEET 2 B 7 GLU A 52 ILE A 57 1 N LEU A 55 O ARG A 77 SHEET 3 B 7 ILE A 7 ALA A 13 1 N ALA A 9 O ILE A 54 SHEET 4 B 7 LEU A 102 ASP A 107 1 O LEU A 102 N SER A 8 SHEET 5 B 7 VAL A 159 ASP A 169 -1 O GLN A 166 N THR A 105 SHEET 6 B 7 VAL B 141 ILE B 144 -1 O LYS B 142 N TYR A 160 SHEET 7 B 7 VAL B 150 PHE B 152 -1 O ASP B 151 N ILE B 143 SHEET 1 C 2 GLU A 30 VAL A 31 0 SHEET 2 C 2 ARG A 34 LYS A 35 -1 O ARG A 34 N VAL A 31 SHEET 1 D 7 VAL A 150 PHE A 152 0 SHEET 2 D 7 VAL A 141 ILE A 144 -1 N ILE A 143 O ASP A 151 SHEET 3 D 7 VAL B 159 ASP B 169 -1 O TYR B 160 N LYS A 142 SHEET 4 D 7 LEU B 102 ASP B 107 -1 N THR B 105 O GLN B 166 SHEET 5 D 7 ILE B 7 ALA B 13 1 N SER B 8 O LEU B 104 SHEET 6 D 7 GLU B 52 ILE B 57 1 O ILE B 54 N ALA B 9 SHEET 7 D 7 ILE B 76 TYR B 80 1 O VAL B 79 N LEU B 55 SHEET 1 E 5 VAL A 150 PHE A 152 0 SHEET 2 E 5 VAL A 141 ILE A 144 -1 N ILE A 143 O ASP A 151 SHEET 3 E 5 VAL B 159 ASP B 169 -1 O TYR B 160 N LYS A 142 SHEET 4 E 5 ALA B 130 LYS B 136 -1 N THR B 135 O ASN B 161 SHEET 5 E 5 VAL B 203 HIS B 207 1 O VAL B 206 N ILE B 132 SHEET 1 F 2 GLU B 30 VAL B 31 0 SHEET 2 F 2 ARG B 34 LYS B 35 -1 O ARG B 34 N VAL B 31 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ILE A 2 1555 1555 1.33 LINK C ARG A 19 N MSE A 20 1555 1555 1.33 LINK C ASP A 147 N MSE A 148 1555 1555 1.33 LINK C MSE A 148 N TYR A 149 1555 1555 1.33 LINK C ALA A 175 N MSE A 176 1555 1555 1.32 LINK C MSE A 176 N TYR A 177 1555 1555 1.33 LINK C ASP B 147 N MSE B 148 1555 1555 1.33 LINK C MSE B 148 N TYR B 149 1555 1555 1.33 LINK C ALA B 175 N MSE B 176 1555 1555 1.33 LINK C MSE B 176 N TYR B 177 1555 1555 1.33 LINK NA NA B 301 O HOH B 466 1555 1555 2.29 LINK OD1 ASP B 151 NA NA B 301 1555 1555 2.30 LINK NA NA B 301 O HOH B 465 1555 1555 2.31 LINK NA NA B 301 O HOH B 451 1555 1555 2.43 CISPEP 1 THR A 164 PRO A 165 0 13.59 CISPEP 2 THR B 164 PRO B 165 0 12.36 SITE 1 AC1 3 ASP A 151 ARG A 199 HOH A 484 SITE 1 AC2 4 ASP B 151 HOH B 451 HOH B 465 HOH B 466 CRYST1 87.858 145.509 36.719 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011382 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006872 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027234 0.00000 MASTER 545 0 8 21 30 0 2 6 0 0 0 38 END