HEADER TRANSFERASE/SIGNALING PROTEIN 16-MAY-13 4KRC TITLE CRYSTAL STRUCTURE OF PHO85-PCL10-ATP-GAMMA-S COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIN-DEPENDENT PROTEIN KINASE PHO85; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NEGATIVE REGULATOR OF THE PHO SYSTEM, SERINE/THREONINE- COMPND 5 PROTEIN KINASE PHO85; COMPND 6 EC: 2.7.11.22; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PHO85 CYCLIN-10; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 227-433; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: P7102.18A, PHO85, SSG3, YPL031C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PQE60; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 14 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 15 ORGANISM_TAXID: 559292; SOURCE 16 STRAIN: ATCC 204508 / S288C; SOURCE 17 GENE: G2838, PCL10, YGL134W; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 20 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PSBET KEYWDS GLYCOGEN SYNTHESIS, GLYCOGEN SYNTHESIS REGULATION, TRANSFERASE- KEYWDS 2 SIGNALING PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR F.A.QUIOCHO,F.ZHENG REVDAT 3 13-NOV-13 4KRC 1 JRNL REVDAT 2 02-OCT-13 4KRC 1 JRNL REVDAT 1 18-SEP-13 4KRC 0 JRNL AUTH F.ZHENG,F.A.QUIOCHO JRNL TITL NEW STRUCTURAL INSIGHTS INTO PHOSPHORYLATION-FREE MECHANISM JRNL TITL 2 FOR FULL CYCLIN-DEPENDENT KINASE (CDK)-CYCLIN ACTIVITY AND JRNL TITL 3 SUBSTRATE RECOGNITION. JRNL REF J.BIOL.CHEM. V. 288 30682 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 24022486 JRNL DOI 10.1074/JBC.M113.502773 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 15166 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 756 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.4457 - 4.4394 1.00 3060 184 0.1979 0.2529 REMARK 3 2 4.4394 - 3.5244 1.00 3009 168 0.1832 0.2729 REMARK 3 3 3.5244 - 3.0791 1.00 3022 144 0.2093 0.2866 REMARK 3 4 3.0791 - 2.7976 0.97 2901 151 0.2283 0.2894 REMARK 3 5 2.7976 - 2.5972 0.80 2418 109 0.2339 0.3127 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 81.39 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.41120 REMARK 3 B22 (A**2) : -12.63790 REMARK 3 B33 (A**2) : 5.22670 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -14.05210 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3630 REMARK 3 ANGLE : 0.966 4957 REMARK 3 CHIRALITY : 0.059 596 REMARK 3 PLANARITY : 0.004 623 REMARK 3 DIHEDRAL : 19.060 1245 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: chain A REMARK 3 ORIGIN FOR THE GROUP (A): 3.0252 -5.7994 34.4235 REMARK 3 T TENSOR REMARK 3 T11: 0.3632 T22: 0.3455 REMARK 3 T33: 0.3453 T12: -0.0153 REMARK 3 T13: -0.0126 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 1.1652 L22: 1.3119 REMARK 3 L33: 1.2150 L12: 0.4113 REMARK 3 L13: -0.2370 L23: -0.7285 REMARK 3 S TENSOR REMARK 3 S11: 0.0004 S12: -0.0054 S13: -0.0333 REMARK 3 S21: 0.1713 S22: 0.0119 S23: -0.0566 REMARK 3 S31: -0.1370 S32: 0.0527 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: chain B REMARK 3 ORIGIN FOR THE GROUP (A): 11.4464 -15.5930 4.6551 REMARK 3 T TENSOR REMARK 3 T11: 0.5539 T22: 0.8157 REMARK 3 T33: 0.8242 T12: -0.0000 REMARK 3 T13: 0.0177 T23: -0.2300 REMARK 3 L TENSOR REMARK 3 L11: 0.6294 L22: 0.6325 REMARK 3 L33: 0.9102 L12: -0.0357 REMARK 3 L13: 0.6950 L23: 0.2846 REMARK 3 S TENSOR REMARK 3 S11: 0.0627 S12: 0.1554 S13: -0.8256 REMARK 3 S21: -0.0198 S22: 0.2351 S23: -0.2907 REMARK 3 S31: 0.1802 S32: 0.4117 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4KRC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAY-13. REMARK 100 THE RCSB ID CODE IS RCSB079697. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97925 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15166 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.597 REMARK 200 RESOLUTION RANGE LOW (A) : 39.441 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22-25% POLYETHYLENE GLYCOL 5000 REMARK 280 MONOMETHYL ETHER (PEG 5K MME), 0.1 M 2-MORPHOLINOETHANESULFONIC REMARK 280 ACID (MES), PH 6.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.68900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: HETERODIMER IS COMPOSED OF ONE MOLECULAR PHO85 AND ONE REMARK 300 MOLECULAR PCL10 REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 98 REMARK 465 GLY A 99 REMARK 465 ASN A 100 REMARK 465 THR A 101 REMARK 465 HIS A 303 REMARK 465 ALA A 304 REMARK 465 SER A 305 REMARK 465 MET A 306 REMARK 465 GLY A 307 REMARK 465 GLY A 308 REMARK 465 SER A 309 REMARK 465 ARG A 310 REMARK 465 SER A 311 REMARK 465 HIS A 312 REMARK 465 HIS A 313 REMARK 465 HIS A 314 REMARK 465 HIS A 315 REMARK 465 HIS A 316 REMARK 465 HIS A 317 REMARK 465 SER B 227 REMARK 465 LEU B 228 REMARK 465 PRO B 229 REMARK 465 HIS B 230 REMARK 465 ASP B 231 REMARK 465 GLU B 232 REMARK 465 GLU B 233 REMARK 465 GLU B 234 REMARK 465 ASP B 235 REMARK 465 GLN B 236 REMARK 465 GLU B 237 REMARK 465 LYS B 238 REMARK 465 THR B 239 REMARK 465 LYS B 240 REMARK 465 SER B 241 REMARK 465 GLU B 242 REMARK 465 SER B 243 REMARK 465 GLU B 256 REMARK 465 VAL B 257 REMARK 465 ARG B 283 REMARK 465 LYS B 284 REMARK 465 CYS B 285 REMARK 465 THR B 286 REMARK 465 GLY B 287 REMARK 465 PHE B 288 REMARK 465 CYS B 432 REMARK 465 VAL B 433 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 4 OG REMARK 470 LYS A 8 CG CD CE NZ REMARK 470 SER A 42 OG REMARK 470 GLU A 43 CG CD OE1 OE2 REMARK 470 GLU A 44 CG CD OE1 OE2 REMARK 470 GLU A 59 CG CD OE1 OE2 REMARK 470 LYS A 61 CE NZ REMARK 470 GLU A 75 CG CD OE1 OE2 REMARK 470 ASN A 76 CG OD1 ND2 REMARK 470 LYS A 90 CE NZ REMARK 470 LYS A 91 NZ REMARK 470 LYS A 143 CG CD CE NZ REMARK 470 ARG A 144 CD NE CZ NH1 NH2 REMARK 470 ARG A 156 CZ NH1 NH2 REMARK 470 ASN A 163 CG OD1 ND2 REMARK 470 PHE A 165 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 168 CG CD OE1 OE2 REMARK 470 ARG A 184 CZ NH1 NH2 REMARK 470 LYS A 206 CE NZ REMARK 470 GLU A 215 CG CD OE1 OE2 REMARK 470 LYS A 219 CG CD CE NZ REMARK 470 LYS A 238 CG CD CE NZ REMARK 470 LYS A 241 CD CE NZ REMARK 470 ILE A 246 CD1 REMARK 470 GLN A 247 CG CD OE1 NE2 REMARK 470 GLN A 248 CG CD OE1 NE2 REMARK 470 GLN A 256 CG CD OE1 NE2 REMARK 470 LYS A 263 CG CD CE NZ REMARK 470 LYS A 289 CD CE NZ REMARK 470 HIS A 302 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 244 CG CD OE1 OE2 REMARK 470 HIS B 249 CG ND1 CD2 CE1 NE2 REMARK 470 ASP B 254 CG OD1 OD2 REMARK 470 HIS B 259 CG ND1 CD2 CE1 NE2 REMARK 470 ILE B 260 O CG1 CG2 CD1 REMARK 470 VAL B 262 CG1 CG2 REMARK 470 ASP B 263 CG OD1 OD2 REMARK 470 GLU B 264 CG CD OE1 OE2 REMARK 470 LEU B 266 CG CD1 CD2 REMARK 470 PHE B 269 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 270 CG CD CE NZ REMARK 470 GLU B 271 CG CD OE1 OE2 REMARK 470 GLU B 274 CD OE1 OE2 REMARK 470 LEU B 277 CG CD1 CD2 REMARK 470 LYS B 278 CG CD CE NZ REMARK 470 LEU B 279 CG CD1 CD2 REMARK 470 ASN B 282 CG OD1 ND2 REMARK 470 ASN B 289 CG OD1 ND2 REMARK 470 ARG B 291 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 293 CG CD OE1 OE2 REMARK 470 LYS B 294 CG CD CE NZ REMARK 470 LYS B 295 CD CE NZ REMARK 470 MET B 302 CG SD CE REMARK 470 LYS B 303 CG CD CE NZ REMARK 470 LYS B 305 CG CD CE NZ REMARK 470 LEU B 308 CG CD1 CD2 REMARK 470 SER B 309 OG REMARK 470 ASP B 312 CG OD1 OD2 REMARK 470 LEU B 314 CG CD1 CD2 REMARK 470 LYS B 315 CG CD CE NZ REMARK 470 ARG B 316 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 318 CG CD OE1 NE2 REMARK 470 ASP B 319 CG OD1 OD2 REMARK 470 LYS B 320 CG CD CE NZ REMARK 470 GLU B 322 CG CD OE1 OE2 REMARK 470 LEU B 329 CG CD1 CD2 REMARK 470 ASN B 345 CG OD1 ND2 REMARK 470 LEU B 350 CG CD1 CD2 REMARK 470 LYS B 351 CE NZ REMARK 470 LEU B 352 CG CD1 CD2 REMARK 470 GLU B 356 CG CD OE1 OE2 REMARK 470 LYS B 357 CG CD CE NZ REMARK 470 VAL B 359 CG1 CG2 REMARK 470 PHE B 377 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR B 383 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE B 384 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER B 385 OG REMARK 470 LYS B 386 CG CD CE NZ REMARK 470 ILE B 390 CG1 CG2 CD1 REMARK 470 SER B 391 OG REMARK 470 LYS B 392 CG CD CE NZ REMARK 470 ARG B 393 NE CZ NH1 NH2 REMARK 470 LEU B 394 CG CD1 CD2 REMARK 470 LYS B 397 CG CD CE NZ REMARK 470 LEU B 398 CG CD1 CD2 REMARK 470 ASN B 408 CG OD1 ND2 REMARK 470 LYS B 417 CG CD CE NZ REMARK 470 LYS B 422 CG CD CE NZ REMARK 470 GLU B 427 CG CD OE1 OE2 REMARK 470 LEU B 428 CG CD1 CD2 REMARK 470 ARG B 429 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 3 106.98 87.91 REMARK 500 LEU A 10 -146.90 -127.69 REMARK 500 THR A 28 -74.06 -78.36 REMARK 500 THR A 74 -163.79 -101.61 REMARK 500 ASP A 133 39.89 -144.58 REMARK 500 VAL A 170 119.42 75.67 REMARK 500 SER A 187 -129.61 -105.76 REMARK 500 PRO A 210 39.78 -70.06 REMARK 500 TRP A 233 64.89 -167.18 REMARK 500 ILE A 246 160.86 -46.59 REMARK 500 ARG A 249 114.15 -171.74 REMARK 500 ASN B 245 107.57 57.65 REMARK 500 LEU B 247 -6.18 -56.91 REMARK 500 HIS B 249 96.30 -63.56 REMARK 500 VAL B 253 -3.88 -58.86 REMARK 500 ASP B 254 -62.05 -95.97 REMARK 500 PRO B 306 109.59 -42.04 REMARK 500 GLU B 322 70.19 44.09 REMARK 500 THR B 341 151.09 176.67 REMARK 500 VAL B 387 -17.89 -48.52 REMARK 500 ARG B 429 -111.95 -71.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 138 OD1 REMARK 620 2 AGS A 402 O2A 73.9 REMARK 620 3 AGS A 402 O2G 63.8 95.6 REMARK 620 4 AGS A 402 O3B 96.6 59.3 58.0 REMARK 620 5 AGS A 402 O3' 105.1 85.4 167.8 131.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AGS A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4KRD RELATED DB: PDB DBREF 4KRC A 1 305 UNP P17157 PHO85_YEAST 1 305 DBREF 4KRC B 227 433 UNP P53124 PCL10_YEAST 227 433 SEQADV 4KRC MET A 306 UNP P17157 EXPRESSION TAG SEQADV 4KRC GLY A 307 UNP P17157 EXPRESSION TAG SEQADV 4KRC GLY A 308 UNP P17157 EXPRESSION TAG SEQADV 4KRC SER A 309 UNP P17157 EXPRESSION TAG SEQADV 4KRC ARG A 310 UNP P17157 EXPRESSION TAG SEQADV 4KRC SER A 311 UNP P17157 EXPRESSION TAG SEQADV 4KRC HIS A 312 UNP P17157 EXPRESSION TAG SEQADV 4KRC HIS A 313 UNP P17157 EXPRESSION TAG SEQADV 4KRC HIS A 314 UNP P17157 EXPRESSION TAG SEQADV 4KRC HIS A 315 UNP P17157 EXPRESSION TAG SEQADV 4KRC HIS A 316 UNP P17157 EXPRESSION TAG SEQADV 4KRC HIS A 317 UNP P17157 EXPRESSION TAG SEQRES 1 A 317 MET SER SER SER SER GLN PHE LYS GLN LEU GLU LYS LEU SEQRES 2 A 317 GLY ASN GLY THR TYR ALA THR VAL TYR LYS GLY LEU ASN SEQRES 3 A 317 LYS THR THR GLY VAL TYR VAL ALA LEU LYS GLU VAL LYS SEQRES 4 A 317 LEU ASP SER GLU GLU GLY THR PRO SER THR ALA ILE ARG SEQRES 5 A 317 GLU ILE SER LEU MET LYS GLU LEU LYS HIS GLU ASN ILE SEQRES 6 A 317 VAL ARG LEU TYR ASP VAL ILE HIS THR GLU ASN LYS LEU SEQRES 7 A 317 THR LEU VAL PHE GLU PHE MET ASP ASN ASP LEU LYS LYS SEQRES 8 A 317 TYR MET ASP SER ARG THR VAL GLY ASN THR PRO ARG GLY SEQRES 9 A 317 LEU GLU LEU ASN LEU VAL LYS TYR PHE GLN TRP GLN LEU SEQRES 10 A 317 LEU GLN GLY LEU ALA PHE CYS HIS GLU ASN LYS ILE LEU SEQRES 11 A 317 HIS ARG ASP LEU LYS PRO GLN ASN LEU LEU ILE ASN LYS SEQRES 12 A 317 ARG GLY GLN LEU LYS LEU GLY ASP PHE GLY LEU ALA ARG SEQRES 13 A 317 ALA PHE GLY ILE PRO VAL ASN THR PHE SER SER GLU VAL SEQRES 14 A 317 VAL THR LEU TRP TYR ARG ALA PRO ASP VAL LEU MET GLY SEQRES 15 A 317 SER ARG THR TYR SER THR SER ILE ASP ILE TRP SER CYS SEQRES 16 A 317 GLY CYS ILE LEU ALA GLU MET ILE THR GLY LYS PRO LEU SEQRES 17 A 317 PHE PRO GLY THR ASN ASP GLU GLU GLN LEU LYS LEU ILE SEQRES 18 A 317 PHE ASP ILE MET GLY THR PRO ASN GLU SER LEU TRP PRO SEQRES 19 A 317 SER VAL THR LYS LEU PRO LYS TYR ASN PRO ASN ILE GLN SEQRES 20 A 317 GLN ARG PRO PRO ARG ASP LEU ARG GLN VAL LEU GLN PRO SEQRES 21 A 317 HIS THR LYS GLU PRO LEU ASP GLY ASN LEU MET ASP PHE SEQRES 22 A 317 LEU HIS GLY LEU LEU GLN LEU ASN PRO ASP MET ARG LEU SEQRES 23 A 317 SER ALA LYS GLN ALA LEU HIS HIS PRO TRP PHE ALA GLU SEQRES 24 A 317 TYR TYR HIS HIS ALA SER MET GLY GLY SER ARG SER HIS SEQRES 25 A 317 HIS HIS HIS HIS HIS SEQRES 1 B 207 SER LEU PRO HIS ASP GLU GLU GLU ASP GLN GLU LYS THR SEQRES 2 B 207 LYS SER GLU SER GLU ASN PRO LEU LEU HIS GLY ILE PRO SEQRES 3 B 207 VAL ASP VAL GLU VAL PRO HIS ILE SER VAL ASP GLU ALA SEQRES 4 B 207 LEU ALA ASN PHE LYS GLU THR ILE GLU LEU LEU LEU LYS SEQRES 5 B 207 LEU SER GLY ASN ARG LYS CYS THR GLY PHE ASN THR ARG SEQRES 6 B 207 VAL GLU LYS LYS GLU TYR SER ASN PHE TYR MET LYS SER SEQRES 7 B 207 LYS PRO THR LEU SER SER ALA ASP PHE LEU LYS ARG ILE SEQRES 8 B 207 GLN ASP LYS CYS GLU TYR GLN PRO THR VAL TYR LEU VAL SEQRES 9 B 207 ALA THR PHE LEU ILE ASP THR LEU PHE LEU THR ARG ASP SEQRES 10 B 207 GLY ASN ASN ILE LEU GLN LEU LYS LEU ASN LEU GLN GLU SEQRES 11 B 207 LYS GLU VAL HIS ARG MET ILE ILE ALA ALA VAL ARG LEU SEQRES 12 B 207 SER THR LYS LEU LEU GLU ASP PHE VAL HIS SER HIS GLU SEQRES 13 B 207 TYR PHE SER LYS VAL CYS GLY ILE SER LYS ARG LEU LEU SEQRES 14 B 207 THR LYS LEU GLU VAL SER LEU LEU ILE CYS VAL CYS ASN SEQRES 15 B 207 THR LYS LEU MET VAL SER ASN ARG LYS LEU ALA ALA SER SEQRES 16 B 207 LYS LEU LEU LEU ASN GLU LEU ARG SER PHE CYS VAL HET MG A 401 1 HET AGS A 402 31 HETNAM MG MAGNESIUM ION HETNAM AGS PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER HETSYN AGS ATP-GAMMA-S; ADENOSINE 5'-(3-THIOTRIPHOSPHATE); HETSYN 2 AGS ADENOSINE 5'-(GAMMA-THIOTRIPHOSPHATE); ADENOSINE-5'- HETSYN 3 AGS DIPHOSPHATE MONOTHIOPHOSPHATE FORMUL 3 MG MG 2+ FORMUL 4 AGS C10 H16 N5 O12 P3 S FORMUL 5 HOH *23(H2 O) HELIX 1 1 SER A 3 SER A 5 5 3 HELIX 2 2 PRO A 47 LEU A 56 1 10 HELIX 3 3 LEU A 89 SER A 95 1 7 HELIX 4 4 GLU A 106 ASN A 127 1 22 HELIX 5 5 LYS A 135 GLN A 137 5 3 HELIX 6 6 ASP A 151 ALA A 155 5 5 HELIX 7 7 THR A 171 ARG A 175 5 5 HELIX 8 8 ALA A 176 MET A 181 1 6 HELIX 9 9 THR A 188 GLY A 205 1 18 HELIX 10 10 ASN A 213 GLY A 226 1 14 HELIX 11 11 TRP A 233 LEU A 239 5 7 HELIX 12 12 ASP A 253 GLN A 259 1 7 HELIX 13 13 PRO A 260 THR A 262 5 3 HELIX 14 14 ASP A 267 LEU A 278 1 12 HELIX 15 15 ASN A 281 ARG A 285 5 5 HELIX 16 16 SER A 287 LEU A 292 1 6 HELIX 17 17 HIS A 294 TYR A 301 5 8 HELIX 18 18 ASN B 245 HIS B 249 5 5 HELIX 19 19 SER B 261 GLY B 281 1 21 HELIX 20 20 THR B 290 GLU B 296 1 7 HELIX 21 21 TYR B 297 TYR B 301 5 5 HELIX 22 22 SER B 309 GLU B 322 1 14 HELIX 23 23 GLN B 324 PHE B 339 1 16 HELIX 24 24 GLN B 355 GLU B 375 1 21 HELIX 25 25 SER B 380 CYS B 388 1 9 HELIX 26 26 SER B 391 CYS B 407 1 17 HELIX 27 27 SER B 414 GLU B 427 1 14 SHEET 1 A 5 PHE A 7 ASN A 15 0 SHEET 2 A 5 ALA A 19 ASN A 26 -1 O VAL A 21 N LEU A 13 SHEET 3 A 5 TYR A 32 LYS A 39 -1 O LEU A 35 N TYR A 22 SHEET 4 A 5 LYS A 77 GLU A 83 -1 O LEU A 78 N VAL A 38 SHEET 5 A 5 LEU A 68 THR A 74 -1 N TYR A 69 O VAL A 81 SHEET 1 B 3 ASN A 87 ASP A 88 0 SHEET 2 B 3 LEU A 139 ILE A 141 -1 O ILE A 141 N ASN A 87 SHEET 3 B 3 LEU A 147 LEU A 149 -1 O LYS A 148 N LEU A 140 SHEET 1 C 2 ILE A 129 LEU A 130 0 SHEET 2 C 2 ARG A 156 ALA A 157 -1 O ARG A 156 N LEU A 130 SHEET 1 D 2 LEU B 340 ARG B 342 0 SHEET 2 D 2 LEU B 348 LEU B 350 -1 O GLN B 349 N THR B 341 LINK OD1 ASN A 138 MG MG A 401 1555 1555 2.46 LINK MG MG A 401 O2A AGS A 402 1555 1555 2.64 LINK MG MG A 401 O2G AGS A 402 1555 1555 2.64 LINK MG MG A 401 O3B AGS A 402 1555 1555 2.65 LINK MG MG A 401 O3' AGS A 402 1555 1555 2.97 CISPEP 1 PRO A 102 ARG A 103 0 -10.91 SITE 1 AC1 3 ASN A 138 ASP A 151 AGS A 402 SITE 1 AC2 17 GLY A 16 THR A 17 TYR A 18 VAL A 21 SITE 2 AC2 17 ALA A 34 LYS A 36 GLU A 83 MET A 85 SITE 3 AC2 17 ASP A 88 ASP A 133 LYS A 135 GLN A 137 SITE 4 AC2 17 ASN A 138 LEU A 140 ASP A 151 MG A 401 SITE 5 AC2 17 HOH A 504 CRYST1 50.145 65.378 80.254 90.00 100.61 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019942 0.000000 0.003735 0.00000 SCALE2 0.000000 0.015296 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012677 0.00000 MASTER 438 0 2 27 12 0 6 6 0 0 0 41 END