HEADER HYDROLASE 24-MAR-13 4JUI TITLE CRYSTAL STRUCTURE OF TANNASE FROM FROM LACTOBACILLUS PLANTARUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: TANNASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS PLANTARUM; SOURCE 3 ORGANISM_TAXID: 1590; SOURCE 4 GENE: TANLPL; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS GALLATE, HYDROLASE, HYDROLYSIS, TANNINS EXPDTA X-RAY DIFFRACTION AUTHOR B.REN,M.WU,Q.WANG,X.PENG,H.WEN,W.J.MCKINSTRY,Q.CHEN REVDAT 1 22-MAY-13 4JUI 0 JRNL AUTH B.REN,M.WU,Q.WANG,X.PENG,H.WEN,W.J.MCKINSTRY,Q.CHEN JRNL TITL CRYSTAL STRUCTURE OF TANNASE FROM LACTOBACILLUS PLANTARUM JRNL REF J.MOL.BIOL. 2013 JRNL REFN ESSN 1089-8638 JRNL PMID 23648840 JRNL DOI 10.1016/J.JMB.2013.04.032 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 3 NUMBER OF REFLECTIONS : 90551 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.690 REMARK 3 FREE R VALUE TEST SET COUNT : 1530 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.5241 - 3.7725 0.98 8702 156 0.1346 0.1341 REMARK 3 2 3.7725 - 2.9978 0.98 8665 152 0.1426 0.1610 REMARK 3 3 2.9978 - 2.6199 0.96 8525 148 0.1600 0.2296 REMARK 3 4 2.6199 - 2.3808 0.95 8443 144 0.1550 0.1909 REMARK 3 5 2.3808 - 2.2104 0.94 8309 140 0.1542 0.1411 REMARK 3 6 2.2104 - 2.0803 0.92 8120 137 0.1520 0.2092 REMARK 3 7 2.0803 - 1.9762 0.90 7958 137 0.1583 0.1976 REMARK 3 8 1.9762 - 1.8902 0.89 7855 136 0.1723 0.2022 REMARK 3 9 1.8902 - 1.8175 0.86 7609 126 0.1754 0.2479 REMARK 3 10 1.8175 - 1.7548 0.85 7497 130 0.1851 0.2185 REMARK 3 11 1.7548 - 1.7000 0.83 7338 124 0.1904 0.2529 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 7533 REMARK 3 ANGLE : 1.058 10264 REMARK 3 CHIRALITY : 0.071 1147 REMARK 3 PLANARITY : 0.004 1340 REMARK 3 DIHEDRAL : 14.313 2707 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (chain A and resid 1:51) REMARK 3 ORIGIN FOR THE GROUP (A): 27.3614 114.8073 88.1600 REMARK 3 T TENSOR REMARK 3 T11: 0.3165 T22: 0.1065 REMARK 3 T33: 0.0980 T12: -0.0104 REMARK 3 T13: -0.0148 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.7483 L22: 1.1360 REMARK 3 L33: 2.0623 L12: -0.1334 REMARK 3 L13: -0.0664 L23: -0.1491 REMARK 3 S TENSOR REMARK 3 S11: 0.0108 S12: -0.0641 S13: 0.0763 REMARK 3 S21: 0.0870 S22: 0.0151 S23: 0.0424 REMARK 3 S31: -0.3954 S32: 0.0771 S33: 0.0018 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (chain A and resid 52:127) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6439 106.2992 84.8485 REMARK 3 T TENSOR REMARK 3 T11: 0.2090 T22: 0.0819 REMARK 3 T33: 0.0813 T12: 0.0121 REMARK 3 T13: -0.0090 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.7494 L22: 0.8362 REMARK 3 L33: 3.0143 L12: 0.0097 REMARK 3 L13: 0.6951 L23: 0.0307 REMARK 3 S TENSOR REMARK 3 S11: -0.0431 S12: -0.0290 S13: 0.0902 REMARK 3 S21: 0.0825 S22: -0.0037 S23: 0.0405 REMARK 3 S31: -0.3161 S32: -0.1212 S33: 0.0444 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (chain A and resid 128:229) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9078 98.7381 74.0715 REMARK 3 T TENSOR REMARK 3 T11: 0.1324 T22: 0.1279 REMARK 3 T33: 0.0527 T12: 0.0126 REMARK 3 T13: -0.0005 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 0.2958 L22: 1.9281 REMARK 3 L33: 1.5814 L12: 0.4038 REMARK 3 L13: 0.2969 L23: 0.9308 REMARK 3 S TENSOR REMARK 3 S11: 0.0021 S12: 0.0304 S13: 0.0369 REMARK 3 S21: -0.0260 S22: 0.0008 S23: -0.0198 REMARK 3 S31: -0.1161 S32: 0.1485 S33: 0.0004 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (chain A and resid 230:242) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8068 104.1674 76.2288 REMARK 3 T TENSOR REMARK 3 T11: 0.7756 T22: 1.0871 REMARK 3 T33: 1.3061 T12: 0.0338 REMARK 3 T13: 0.0220 T23: -0.3000 REMARK 3 L TENSOR REMARK 3 L11: 7.0461 L22: 3.6852 REMARK 3 L33: 5.7136 L12: 3.6049 REMARK 3 L13: 4.1019 L23: -0.3758 REMARK 3 S TENSOR REMARK 3 S11: -0.1339 S12: -1.0319 S13: 0.8455 REMARK 3 S21: 0.3667 S22: -0.1474 S23: 0.0039 REMARK 3 S31: -0.6308 S32: -0.1984 S33: 0.2136 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (chain A and resid 243:282) REMARK 3 ORIGIN FOR THE GROUP (A): 22.5935 80.2204 62.3439 REMARK 3 T TENSOR REMARK 3 T11: 0.1990 T22: 0.1434 REMARK 3 T33: 0.0653 T12: 0.0653 REMARK 3 T13: 0.0028 T23: -0.0417 REMARK 3 L TENSOR REMARK 3 L11: 1.0575 L22: 1.7610 REMARK 3 L33: 2.3428 L12: 0.8558 REMARK 3 L13: 0.1324 L23: 0.2641 REMARK 3 S TENSOR REMARK 3 S11: -0.2267 S12: -0.3186 S13: 0.1843 REMARK 3 S21: 0.1694 S22: 0.0947 S23: 0.0309 REMARK 3 S31: 0.0482 S32: -0.1098 S33: 0.0799 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (chain A and resid 283:461) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3945 84.9230 71.8328 REMARK 3 T TENSOR REMARK 3 T11: 0.1983 T22: 0.1063 REMARK 3 T33: 0.0569 T12: 0.0152 REMARK 3 T13: -0.0110 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.4874 L22: 1.0025 REMARK 3 L33: 1.3120 L12: 0.1727 REMARK 3 L13: 0.0613 L23: 0.2543 REMARK 3 S TENSOR REMARK 3 S11: 0.0138 S12: -0.0059 S13: 0.0201 REMARK 3 S21: 0.0848 S22: 0.0180 S23: -0.0086 REMARK 3 S31: 0.2567 S32: 0.0294 S33: -0.0115 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (chain A and resid 462:469) REMARK 3 ORIGIN FOR THE GROUP (A): 34.1997 92.4264 93.4088 REMARK 3 T TENSOR REMARK 3 T11: 0.2593 T22: 0.1554 REMARK 3 T33: 0.1141 T12: 0.0321 REMARK 3 T13: -0.0723 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 4.1776 L22: 3.2640 REMARK 3 L33: 6.2783 L12: -0.1291 REMARK 3 L13: -1.0659 L23: -1.3303 REMARK 3 S TENSOR REMARK 3 S11: -0.0564 S12: -0.4029 S13: 0.0593 REMARK 3 S21: 0.3238 S22: 0.0211 S23: -0.2939 REMARK 3 S31: -0.1017 S32: 0.5301 S33: 0.1002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JUI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-APR-13. REMARK 100 THE RCSB ID CODE IS RCSB078520. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 90575 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 65.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.30500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG 3000, 0.1M TRI-SODIUM REMARK 280 CITRATE PH 5.5, VAPOR DIFFUSION, TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 943 O HOH A 1068 1.80 REMARK 500 OE1 GLN A 310 O HOH A 1030 1.80 REMARK 500 O HOH A 820 O HOH A 939 1.83 REMARK 500 O HOH B 1155 O HOH B 1156 1.84 REMARK 500 O HOH A 717 O HOH B 1154 1.93 REMARK 500 O HOH B 1176 O HOH B 1177 1.94 REMARK 500 O HOH A 826 O HOH A 1044 1.95 REMARK 500 NE2 GLN B 350 O HOH B 1160 1.95 REMARK 500 O HOH B 976 O HOH B 1202 1.95 REMARK 500 O HOH B 987 O HOH B 1060 1.96 REMARK 500 O HOH A 863 O HOH A 869 1.97 REMARK 500 O HOH A 989 O HOH A 1060 1.98 REMARK 500 OD1 ASN A 31 O HOH A 823 1.98 REMARK 500 O HOH B 802 O HOH B 999 1.99 REMARK 500 O HOH B 943 O HOH B 1208 1.99 REMARK 500 O HOH B 822 O HOH B 1052 2.00 REMARK 500 O HOH B 924 O HOH B 991 2.01 REMARK 500 O HOH B 1145 O HOH B 1172 2.01 REMARK 500 O HOH A 751 O HOH B 894 2.02 REMARK 500 OE1 GLN A 310 O HOH A 854 2.04 REMARK 500 OE1 GLN B 271 O HOH B 959 2.04 REMARK 500 O HOH B 1063 O HOH B 1187 2.04 REMARK 500 NH2 ARG A 64 O HOH A 1076 2.08 REMARK 500 NE2 GLN A 350 O HOH A 944 2.08 REMARK 500 ND2 ASN A 325 O HOH A 1091 2.08 REMARK 500 OE1 GLU B 182 O HOH B 917 2.10 REMARK 500 O HOH B 651 O HOH B 1185 2.10 REMARK 500 OE1 GLN A 22 O HOH A 645 2.11 REMARK 500 O HOH A 832 O HOH B 601 2.11 REMARK 500 O HOH B 1173 O HOH B 1174 2.11 REMARK 500 O HOH B 962 O HOH B 1052 2.13 REMARK 500 O HOH B 1157 O HOH B 1158 2.13 REMARK 500 O HOH A 1077 O HOH B 1128 2.13 REMARK 500 OG1 THR B 401 O HOH B 861 2.14 REMARK 500 O HOH B 1166 O HOH B 1167 2.15 REMARK 500 OE2 GLU A 357 O09 EGR A 501 2.15 REMARK 500 NE2 GLN B 298 O HOH B 801 2.15 REMARK 500 O HOH B 920 O HOH B 1214 2.16 REMARK 500 ND2 ASN B 94 O HOH B 850 2.16 REMARK 500 O HOH B 991 O HOH B 1218 2.16 REMARK 500 O HOH A 821 O HOH A 934 2.17 REMARK 500 O HOH A 1035 O HOH A 1063 2.17 REMARK 500 O HOH A 702 O HOH A 938 2.17 REMARK 500 O HOH A 763 O HOH A 1051 2.18 REMARK 500 OD1 ASN B 31 O HOH B 986 2.19 REMARK 500 ND2 ASN A 94 O HOH A 974 2.19 REMARK 500 N ALA B 233 O HOH B 1204 2.19 REMARK 500 OE2 GLU A 244 O HOH A 912 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 163 -118.90 64.06 REMARK 500 CYS A 204 58.48 30.22 REMARK 500 ARG A 228 -158.07 -151.29 REMARK 500 ALA A 233 -154.02 -71.28 REMARK 500 THR A 340 145.37 78.29 REMARK 500 ALA A 344 -157.35 -84.38 REMARK 500 PHE A 371 15.87 -141.93 REMARK 500 PRO B 130 31.59 -99.01 REMARK 500 ALA B 163 -116.35 65.04 REMARK 500 CYS B 204 54.26 32.93 REMARK 500 ARG B 228 -150.23 -147.05 REMARK 500 THR B 340 148.59 82.11 REMARK 500 ALA B 344 -156.93 -82.54 REMARK 500 PHE B 371 16.22 -144.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1083 DISTANCE = 6.23 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EGR A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EGR B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 506 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4J0C RELATED DB: PDB REMARK 900 RELATED ID: 4J0D RELATED DB: PDB REMARK 900 RELATED ID: 4J0G RELATED DB: PDB REMARK 900 RELATED ID: 4J0H RELATED DB: PDB REMARK 900 RELATED ID: 4J0I RELATED DB: PDB REMARK 900 RELATED ID: 4J0J RELATED DB: PDB REMARK 900 RELATED ID: 4J0K RELATED DB: PDB DBREF 4JUI A 1 469 UNP B3Y018 B3Y018_LACPN 1 469 DBREF 4JUI B 1 469 UNP B3Y018 B3Y018_LACPN 1 469 SEQADV 4JUI SER A 0 UNP B3Y018 EXPRESSION TAG SEQADV 4JUI ALA A 163 UNP B3Y018 SER 163 ENGINEERED MUTATION SEQADV 4JUI SER B 0 UNP B3Y018 EXPRESSION TAG SEQADV 4JUI ALA B 163 UNP B3Y018 SER 163 ENGINEERED MUTATION SEQRES 1 A 470 SER MET SER ASN ARG LEU ILE PHE ASP ALA ASP TRP LEU SEQRES 2 A 470 VAL PRO GLU GLN VAL GLN VAL ALA GLY GLN ALA ILE GLN SEQRES 3 A 470 TYR TYR ALA ALA ARG ASN ILE GLN TYR VAL GLN HIS PRO SEQRES 4 A 470 VAL ALA ALA ILE GLN VAL LEU ASN VAL PHE VAL PRO ALA SEQRES 5 A 470 ALA TYR LEU HIS GLY SER SER VAL ASN GLY TYR GLN ARG SEQRES 6 A 470 ALA THR ALA PRO ILE LEU MET PRO ASN THR VAL GLY GLY SEQRES 7 A 470 TYR LEU PRO GLY PRO ALA ASP ASP PRO GLN ARG VAL THR SEQRES 8 A 470 TRP PRO THR ASN ALA GLY THR ILE GLN GLN ALA LEU LYS SEQRES 9 A 470 ARG GLY TYR VAL VAL VAL ALA ALA GLY ILE ARG GLY ARG SEQRES 10 A 470 THR THR VAL ASP LYS SER GLY GLN ARG VAL GLY GLN ALA SEQRES 11 A 470 PRO ALA PHE ILE VAL ASP MET LYS ALA ALA ILE ARG TYR SEQRES 12 A 470 VAL LYS TYR ASN GLN GLY ARG LEU PRO GLY ASP ALA ASN SEQRES 13 A 470 ARG ILE ILE THR ASN GLY THR ALA ALA GLY GLY ALA THR SEQRES 14 A 470 SER ALA LEU ALA GLY ALA SER GLY ASN SER ALA TYR PHE SEQRES 15 A 470 GLU PRO ALA LEU THR ALA LEU GLY ALA ALA PRO ALA THR SEQRES 16 A 470 ASP ASP ILE PHE ALA VAL SER ALA TYR CYS PRO ILE HIS SEQRES 17 A 470 ASN LEU GLU HIS ALA ASP MET ALA TYR GLU TRP GLN PHE SEQRES 18 A 470 ASN GLY ILE ASN ASP TRP HIS ARG TYR GLN PRO VAL ALA SEQRES 19 A 470 GLY THR THR LYS ASN GLY ARG PRO LYS PHE GLU PRO VAL SEQRES 20 A 470 SER GLY GLN LEU THR VAL GLU GLU GLN ALA LEU SER LEU SEQRES 21 A 470 ALA LEU LYS ALA GLN PHE SER THR TYR LEU ASN GLN LEU SEQRES 22 A 470 LYS LEU THR ALA SER ASP GLY THR HIS LEU THR LEU ASN SEQRES 23 A 470 GLU ALA GLY MET GLY SER PHE ARG ASP VAL VAL ARG GLN SEQRES 24 A 470 LEU LEU ILE SER SER ALA GLN THR ALA PHE ASP GLN GLY SEQRES 25 A 470 THR ASP ILE HIS LYS TYR ALA GLY PHE VAL VAL THR GLY SEQRES 26 A 470 ASN GLN VAL THR ASP LEU ASP LEU SER ALA TYR LEU LYS SEQRES 27 A 470 SER LEU THR ARG MET LYS ALA VAL PRO ALA PHE ASP GLN SEQRES 28 A 470 LEU ASP LEU THR SER PRO GLU ASN ASN LEU PHE GLY ASP SEQRES 29 A 470 ALA THR ALA LYS ALA LYS HIS PHE THR ALA LEU ALA GLN SEQRES 30 A 470 THR ARG SER THR VAL THR ALA GLN LEU ALA ASP ALA GLU SEQRES 31 A 470 LEU ILE GLN ALA ILE ASN PRO LEU SER TYR LEU THR THR SEQRES 32 A 470 THR SER SER GLN VAL ALA LYS HIS TRP ARG ILE ARG HIS SEQRES 33 A 470 GLY ALA ALA ASP ARG ASP THR SER PHE ALA ILE PRO ILE SEQRES 34 A 470 ILE LEU ALA ILE MET LEU GLU ASN HIS GLY TYR GLY ILE SEQRES 35 A 470 ASP PHE ALA LEU PRO TRP ASP ILE PRO HIS SER GLY ASP SEQRES 36 A 470 TYR ASP LEU GLY ASP LEU PHE SER TRP ILE ASP GLY LEU SEQRES 37 A 470 CYS GLN SEQRES 1 B 470 SER MET SER ASN ARG LEU ILE PHE ASP ALA ASP TRP LEU SEQRES 2 B 470 VAL PRO GLU GLN VAL GLN VAL ALA GLY GLN ALA ILE GLN SEQRES 3 B 470 TYR TYR ALA ALA ARG ASN ILE GLN TYR VAL GLN HIS PRO SEQRES 4 B 470 VAL ALA ALA ILE GLN VAL LEU ASN VAL PHE VAL PRO ALA SEQRES 5 B 470 ALA TYR LEU HIS GLY SER SER VAL ASN GLY TYR GLN ARG SEQRES 6 B 470 ALA THR ALA PRO ILE LEU MET PRO ASN THR VAL GLY GLY SEQRES 7 B 470 TYR LEU PRO GLY PRO ALA ASP ASP PRO GLN ARG VAL THR SEQRES 8 B 470 TRP PRO THR ASN ALA GLY THR ILE GLN GLN ALA LEU LYS SEQRES 9 B 470 ARG GLY TYR VAL VAL VAL ALA ALA GLY ILE ARG GLY ARG SEQRES 10 B 470 THR THR VAL ASP LYS SER GLY GLN ARG VAL GLY GLN ALA SEQRES 11 B 470 PRO ALA PHE ILE VAL ASP MET LYS ALA ALA ILE ARG TYR SEQRES 12 B 470 VAL LYS TYR ASN GLN GLY ARG LEU PRO GLY ASP ALA ASN SEQRES 13 B 470 ARG ILE ILE THR ASN GLY THR ALA ALA GLY GLY ALA THR SEQRES 14 B 470 SER ALA LEU ALA GLY ALA SER GLY ASN SER ALA TYR PHE SEQRES 15 B 470 GLU PRO ALA LEU THR ALA LEU GLY ALA ALA PRO ALA THR SEQRES 16 B 470 ASP ASP ILE PHE ALA VAL SER ALA TYR CYS PRO ILE HIS SEQRES 17 B 470 ASN LEU GLU HIS ALA ASP MET ALA TYR GLU TRP GLN PHE SEQRES 18 B 470 ASN GLY ILE ASN ASP TRP HIS ARG TYR GLN PRO VAL ALA SEQRES 19 B 470 GLY THR THR LYS ASN GLY ARG PRO LYS PHE GLU PRO VAL SEQRES 20 B 470 SER GLY GLN LEU THR VAL GLU GLU GLN ALA LEU SER LEU SEQRES 21 B 470 ALA LEU LYS ALA GLN PHE SER THR TYR LEU ASN GLN LEU SEQRES 22 B 470 LYS LEU THR ALA SER ASP GLY THR HIS LEU THR LEU ASN SEQRES 23 B 470 GLU ALA GLY MET GLY SER PHE ARG ASP VAL VAL ARG GLN SEQRES 24 B 470 LEU LEU ILE SER SER ALA GLN THR ALA PHE ASP GLN GLY SEQRES 25 B 470 THR ASP ILE HIS LYS TYR ALA GLY PHE VAL VAL THR GLY SEQRES 26 B 470 ASN GLN VAL THR ASP LEU ASP LEU SER ALA TYR LEU LYS SEQRES 27 B 470 SER LEU THR ARG MET LYS ALA VAL PRO ALA PHE ASP GLN SEQRES 28 B 470 LEU ASP LEU THR SER PRO GLU ASN ASN LEU PHE GLY ASP SEQRES 29 B 470 ALA THR ALA LYS ALA LYS HIS PHE THR ALA LEU ALA GLN SEQRES 30 B 470 THR ARG SER THR VAL THR ALA GLN LEU ALA ASP ALA GLU SEQRES 31 B 470 LEU ILE GLN ALA ILE ASN PRO LEU SER TYR LEU THR THR SEQRES 32 B 470 THR SER SER GLN VAL ALA LYS HIS TRP ARG ILE ARG HIS SEQRES 33 B 470 GLY ALA ALA ASP ARG ASP THR SER PHE ALA ILE PRO ILE SEQRES 34 B 470 ILE LEU ALA ILE MET LEU GLU ASN HIS GLY TYR GLY ILE SEQRES 35 B 470 ASP PHE ALA LEU PRO TRP ASP ILE PRO HIS SER GLY ASP SEQRES 36 B 470 TYR ASP LEU GLY ASP LEU PHE SER TRP ILE ASP GLY LEU SEQRES 37 B 470 CYS GLN HET EGR A 501 14 HET PG4 A 502 13 HET PEG A 503 7 HET PGE A 504 10 HET PEG A 505 7 HET PEG A 506 7 HET PEG A 507 7 HET EGR B 501 14 HET PGE B 502 10 HET PEG B 503 7 HET PEG B 504 7 HET PEG B 505 7 HET PEG B 506 7 HETNAM EGR ETHYL 3,4,5-TRIHYDROXYBENZOATE HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PGE TRIETHYLENE GLYCOL HETSYN EGR ETHYL GALLATE FORMUL 3 EGR 2(C9 H10 O5) FORMUL 4 PG4 C8 H18 O5 FORMUL 5 PEG 8(C4 H10 O3) FORMUL 6 PGE 2(C6 H14 O4) FORMUL 16 HOH *1132(H2 O) HELIX 1 1 ASP A 8 LEU A 12 5 5 HELIX 2 2 ALA A 52 HIS A 55 5 4 HELIX 3 3 ASN A 94 ARG A 104 1 11 HELIX 4 4 PRO A 130 ASN A 146 1 17 HELIX 5 5 ALA A 163 SER A 175 1 13 HELIX 6 6 SER A 178 TYR A 180 5 3 HELIX 7 7 PHE A 181 GLY A 189 1 9 HELIX 8 8 ASN A 208 ASN A 221 1 14 HELIX 9 9 THR A 251 LEU A 272 1 22 HELIX 10 10 GLY A 290 GLN A 310 1 21 HELIX 11 11 ASP A 313 TYR A 317 5 5 HELIX 12 12 ASP A 331 THR A 340 1 10 HELIX 13 13 SER A 355 PHE A 361 1 7 HELIX 14 14 THR A 372 ARG A 378 1 7 HELIX 15 15 ASP A 387 ILE A 394 1 8 HELIX 16 16 ASN A 395 LEU A 400 5 6 HELIX 17 17 PHE A 424 HIS A 437 1 14 HELIX 18 18 ASP A 456 GLN A 469 1 14 HELIX 19 19 ASP B 8 LEU B 12 5 5 HELIX 20 20 ALA B 52 HIS B 55 5 4 HELIX 21 21 ASN B 94 GLY B 105 1 12 HELIX 22 22 PRO B 130 ASN B 146 1 17 HELIX 23 23 ALA B 163 SER B 175 1 13 HELIX 24 24 SER B 178 TYR B 180 5 3 HELIX 25 25 PHE B 181 GLY B 189 1 9 HELIX 26 26 ASN B 208 ASN B 221 1 14 HELIX 27 27 THR B 251 LEU B 272 1 22 HELIX 28 28 GLY B 290 ASP B 309 1 20 HELIX 29 29 ASP B 313 TYR B 317 5 5 HELIX 30 30 ASP B 331 THR B 340 1 10 HELIX 31 31 SER B 355 PHE B 361 1 7 HELIX 32 32 THR B 372 ARG B 378 1 7 HELIX 33 33 ASP B 387 ILE B 394 1 8 HELIX 34 34 ASN B 395 LEU B 400 5 6 HELIX 35 35 PHE B 424 HIS B 437 1 14 HELIX 36 36 ASP B 456 GLN B 469 1 14 SHEET 1 A 9 VAL A 13 VAL A 19 0 SHEET 2 A 9 GLN A 22 GLN A 33 -1 O ILE A 24 N VAL A 17 SHEET 3 A 9 VAL A 44 PRO A 50 -1 O VAL A 47 N ALA A 29 SHEET 4 A 9 VAL A 107 ALA A 111 -1 O VAL A 108 N PHE A 48 SHEET 5 A 9 ILE A 69 PRO A 72 1 N LEU A 70 O VAL A 107 SHEET 6 A 9 ILE A 157 THR A 162 1 O ILE A 158 N MET A 71 SHEET 7 A 9 ALA A 199 TYR A 203 1 O TYR A 203 N GLY A 161 SHEET 8 A 9 HIS A 410 ARG A 414 1 O HIS A 410 N VAL A 200 SHEET 9 A 9 GLY A 440 ALA A 444 1 O GLY A 440 N TRP A 411 SHEET 1 B 2 ASP A 225 PRO A 231 0 SHEET 2 B 2 PHE A 243 GLN A 249 -1 O GLU A 244 N GLN A 230 SHEET 1 C 2 PHE A 320 THR A 323 0 SHEET 2 C 2 GLN A 326 LEU A 330 -1 O GLN A 326 N THR A 323 SHEET 1 D 9 VAL B 13 VAL B 19 0 SHEET 2 D 9 GLN B 22 GLN B 33 -1 O TYR B 26 N GLU B 15 SHEET 3 D 9 VAL B 44 PRO B 50 -1 O VAL B 47 N ALA B 29 SHEET 4 D 9 VAL B 107 ALA B 111 -1 O VAL B 108 N PHE B 48 SHEET 5 D 9 ILE B 69 PRO B 72 1 N LEU B 70 O VAL B 107 SHEET 6 D 9 ILE B 157 ASN B 160 1 O ILE B 158 N MET B 71 SHEET 7 D 9 ALA B 199 TYR B 203 1 O SER B 201 N THR B 159 SHEET 8 D 9 HIS B 410 ARG B 414 1 O ARG B 412 N VAL B 200 SHEET 9 D 9 GLY B 440 ALA B 444 1 O ASP B 442 N TRP B 411 SHEET 1 E 2 ASP B 225 THR B 235 0 SHEET 2 E 2 PRO B 241 GLN B 249 -1 O VAL B 246 N ARG B 228 SHEET 1 F 2 PHE B 320 THR B 323 0 SHEET 2 F 2 GLN B 326 LEU B 330 -1 O GLN B 326 N THR B 323 CISPEP 1 TRP A 91 PRO A 92 0 -1.24 CISPEP 2 ALA A 129 PRO A 130 0 3.89 CISPEP 3 VAL A 345 PRO A 346 0 -3.21 CISPEP 4 TRP B 91 PRO B 92 0 -0.26 CISPEP 5 ALA B 129 PRO B 130 0 3.43 CISPEP 6 VAL B 345 PRO B 346 0 -6.79 SITE 1 AC1 13 GLY A 76 GLY A 77 TYR A 78 ALA A 163 SITE 2 AC1 13 ALA A 164 LYS A 343 GLU A 357 ASP A 421 SITE 3 AC1 13 HIS A 451 HOH A 711 HOH A 781 HOH A1035 SITE 4 AC1 13 HOH A1057 SITE 1 AC2 10 SER A 379 VAL A 381 THR A 382 ALA A 383 SITE 2 AC2 10 GLN B 124 LYS B 144 GLN B 147 ASN B 155 SITE 3 AC2 10 HOH B 754 HOH B1006 SITE 1 AC3 3 ASN A 224 LEU A 250 GLN A 255 SITE 1 AC4 10 TRP A 218 LYS A 262 ALA A 287 GLY A 288 SITE 2 AC4 10 MET A 289 ARG A 293 LEU A 332 SER A 333 SITE 3 AC4 10 LEU A 336 HOH A1014 SITE 1 AC5 1 HOH A 998 SITE 1 AC6 5 TYR A 180 HOH A 621 HOH A 784 PEG B 506 SITE 2 AC6 5 HOH B 899 SITE 1 AC7 4 ARG A 293 ARG A 297 SER A 333 HOH A 825 SITE 1 AC8 12 GLY B 76 GLY B 77 TYR B 78 ALA B 163 SITE 2 AC8 12 ALA B 164 ILE B 206 LYS B 343 PHE B 348 SITE 3 AC8 12 GLU B 357 ASP B 421 HIS B 451 HOH B 874 SITE 1 AC9 7 TRP B 218 LYS B 262 ALA B 287 GLY B 288 SITE 2 AC9 7 ARG B 293 SER B 333 LEU B 336 SITE 1 BC1 2 GLY B 324 ASN B 325 SITE 1 BC2 5 ILE B 432 GLU B 435 HOH B 863 HOH B1040 SITE 2 BC2 5 HOH B1132 SITE 1 BC3 7 THR A 380 VAL A 381 ARG B 141 GLU B 182 SITE 2 BC3 7 PRO B 192 ALA B 193 HOH B 973 SITE 1 BC4 4 PEG A 506 HOH A 621 TYR B 180 HOH B 979 CRYST1 47.212 62.943 84.412 70.66 85.49 79.51 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021181 -0.003920 -0.000427 0.00000 SCALE2 0.000000 0.016157 -0.005520 0.00000 SCALE3 0.000000 0.000000 0.012558 0.00000 MASTER 465 0 13 36 26 0 26 6 0 0 0 74 END