HEADER TRANSCRIPTION/DNA 20-MAR-13 4JQD TITLE CRYSTAL STRUCTURE OF THE RESTRICTION-MODIFICATION CONTROLLER PROTEIN TITLE 2 C.CSP231I OL OPERATOR COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CSP231I C PROTEIN; COMPND 3 CHAIN: A, B, E, F; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'- COMPND 7 D(*AP*CP*AP*CP*TP*AP*AP*GP*GP*AP*AP*AP*AP*CP*TP*TP*AP*GP*TP*AP*A)- COMPND 8 3'); COMPND 9 CHAIN: C, G; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'- COMPND 13 D(*TP*TP*AP*CP*TP*AP*AP*GP*TP*TP*TP*TP*CP*CP*TP*TP*AP*GP*TP*GP*T)- COMPND 14 3'); COMPND 15 CHAIN: D, H; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CITROBACTER SP. RFL231; SOURCE 3 ORGANISM_TAXID: 315237; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) GOLD; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-11A; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES KEYWDS HELIX-TURN-HELIX, C CONTROLLER PROTEIN, RESTRICTION-MODIFICATION KEYWDS 2 SYSTEMS, TRANSCRIPTIONAL REGULATION, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.B.SHEVTSOV,S.D.STREETER,S.J.THRESH,J.E.MCGEEHAN,G.G.KNEALE REVDAT 3 15-APR-15 4JQD 1 JRNL REVDAT 2 11-FEB-15 4JQD 1 JRNL REVDAT 1 02-APR-14 4JQD 0 JRNL AUTH M.B.SHEVTSOV,S.D.STREETER,S.J.THRESH,A.SWIDERSKA, JRNL AUTH 2 J.E.MCGEEHAN,G.G.KNEALE JRNL TITL STRUCTURAL ANALYSIS OF DNA BINDING BY C.CSP231I, A MEMBER OF JRNL TITL 2 A NOVEL CLASS OF R-M CONTROLLER PROTEINS REGULATING GENE JRNL TITL 3 EXPRESSION. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 398 2015 JRNL REFN ISSN 0907-4449 JRNL PMID 25664751 JRNL DOI 10.1107/S139900471402690X REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 19280 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1041 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1154 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.11 REMARK 3 BIN R VALUE (WORKING SET) : 0.4020 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.4110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3076 REMARK 3 NUCLEIC ACID ATOMS : 1710 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 51 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05000 REMARK 3 B22 (A**2) : 0.19000 REMARK 3 B33 (A**2) : -0.16000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.19000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.333 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.267 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 29.628 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5046 ; 0.012 ; 0.016 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7152 ; 0.863 ; 1.650 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 376 ; 3.433 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;32.699 ;23.462 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 619 ;13.690 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 35 ;10.936 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 711 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3213 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 94 REMARK 3 ORIGIN FOR THE GROUP (A): -2.3137 -34.4433 186.9655 REMARK 3 T TENSOR REMARK 3 T11: 0.1334 T22: 0.0486 REMARK 3 T33: 0.3271 T12: 0.0321 REMARK 3 T13: -0.0858 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 5.8907 L22: 2.2230 REMARK 3 L33: 3.3134 L12: 0.2478 REMARK 3 L13: -2.0272 L23: -0.5116 REMARK 3 S TENSOR REMARK 3 S11: 0.0809 S12: 0.2509 S13: -0.1371 REMARK 3 S21: -0.1037 S22: -0.0990 S23: -0.0559 REMARK 3 S31: 0.1870 S32: 0.2198 S33: 0.0181 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 94 REMARK 3 ORIGIN FOR THE GROUP (A): -2.8001 -16.2620 182.8177 REMARK 3 T TENSOR REMARK 3 T11: 0.1838 T22: 0.0649 REMARK 3 T33: 0.3285 T12: 0.0120 REMARK 3 T13: -0.0274 T23: 0.0477 REMARK 3 L TENSOR REMARK 3 L11: 5.5200 L22: 5.5151 REMARK 3 L33: 5.7154 L12: -1.3383 REMARK 3 L13: -1.5907 L23: -0.3918 REMARK 3 S TENSOR REMARK 3 S11: 0.3199 S12: 0.5489 S13: 0.3034 REMARK 3 S21: -0.3074 S22: -0.1138 S23: -0.0615 REMARK 3 S31: -0.3207 S32: 0.0474 S33: -0.2061 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 21 REMARK 3 RESIDUE RANGE : D 1 D 21 REMARK 3 ORIGIN FOR THE GROUP (A): -1.5873 -31.5634 149.4808 REMARK 3 T TENSOR REMARK 3 T11: 0.2097 T22: 0.1292 REMARK 3 T33: 0.3497 T12: -0.0152 REMARK 3 T13: 0.0090 T23: 0.0502 REMARK 3 L TENSOR REMARK 3 L11: 2.6108 L22: 5.9067 REMARK 3 L33: 1.9059 L12: -0.8026 REMARK 3 L13: -0.5687 L23: 0.0618 REMARK 3 S TENSOR REMARK 3 S11: 0.2791 S12: 0.2036 S13: 0.1463 REMARK 3 S21: -0.3741 S22: -0.3893 S23: -0.6190 REMARK 3 S31: -0.1992 S32: 0.3588 S33: 0.1102 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 94 REMARK 3 ORIGIN FOR THE GROUP (A): -18.3006 -43.3284 161.3685 REMARK 3 T TENSOR REMARK 3 T11: 0.1490 T22: 0.0209 REMARK 3 T33: 0.3525 T12: -0.0169 REMARK 3 T13: -0.0633 T23: 0.0292 REMARK 3 L TENSOR REMARK 3 L11: 6.1593 L22: 2.0859 REMARK 3 L33: 3.2063 L12: -0.8929 REMARK 3 L13: -2.2879 L23: 0.1476 REMARK 3 S TENSOR REMARK 3 S11: -0.0890 S12: -0.2330 S13: -0.4623 REMARK 3 S21: 0.0432 S22: -0.0685 S23: 0.0335 REMARK 3 S31: 0.2627 S32: -0.0253 S33: 0.1575 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 93 REMARK 3 ORIGIN FOR THE GROUP (A): -17.5239 -24.7864 164.6568 REMARK 3 T TENSOR REMARK 3 T11: 0.1913 T22: 0.0348 REMARK 3 T33: 0.2788 T12: -0.0250 REMARK 3 T13: -0.0333 T23: -0.0434 REMARK 3 L TENSOR REMARK 3 L11: 6.3045 L22: 6.2241 REMARK 3 L33: 4.6433 L12: 1.2495 REMARK 3 L13: -1.3474 L23: -0.3057 REMARK 3 S TENSOR REMARK 3 S11: 0.3606 S12: -0.4554 S13: 0.4166 REMARK 3 S21: 0.3951 S22: -0.1389 S23: 0.1945 REMARK 3 S31: -0.3264 S32: 0.0449 S33: -0.2216 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 1 G 21 REMARK 3 RESIDUE RANGE : H 1 H 21 REMARK 3 ORIGIN FOR THE GROUP (A): -18.5154 -22.4854 198.7889 REMARK 3 T TENSOR REMARK 3 T11: 0.2085 T22: 0.0713 REMARK 3 T33: 0.3841 T12: 0.0217 REMARK 3 T13: 0.0265 T23: -0.0538 REMARK 3 L TENSOR REMARK 3 L11: 2.3799 L22: 6.7162 REMARK 3 L33: 2.0759 L12: 1.4160 REMARK 3 L13: -0.5647 L23: -0.5910 REMARK 3 S TENSOR REMARK 3 S11: 0.3971 S12: -0.1313 S13: 0.2809 REMARK 3 S21: 0.3070 S22: -0.4260 S23: 0.6227 REMARK 3 S31: -0.3371 S32: -0.2382 S33: 0.0289 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JQD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAR-13. REMARK 100 THE RCSB ID CODE IS RCSB078371. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20336 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 36.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.30400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3LFP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS DIALYSED AGAINST THE REMARK 280 BUFFER CONTAINING 0.1 M NACL, 50 MM TRIS-HCL PH 8.2, 1 MM DTT, REMARK 280 AND 1 MM EDTA. CRYSTALLISATION CONDITIONS: 0.2 M SODIUM NITRATE, REMARK 280 0.1 M BIS-TRIS-PROPANE PH 7.5, 24 % (W/V) PEG3350, PROTEIN DIMER/ REMARK 280 DNA MOLAR RATIO 1:1, PROTEIN CONCENTRATION 1.46 MG/ML, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 41.06000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.03500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 41.06000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 64.03500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL ASSEMBLY IS A PROTEIN REMARK 300 DIMER BOUND TO DNA DUPLEX. THE ASYMMETRIC UNIT CONTAINS TWO PROTEIN REMARK 300 -DNA COMPLEXES. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 95 REMARK 465 LYS A 96 REMARK 465 ALA A 97 REMARK 465 LYS A 98 REMARK 465 LYS B 95 REMARK 465 LYS B 96 REMARK 465 ALA B 97 REMARK 465 LYS B 98 REMARK 465 LYS E 98 REMARK 465 ARG F 94 REMARK 465 LYS F 95 REMARK 465 LYS F 96 REMARK 465 ALA F 97 REMARK 465 LYS F 98 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LFP RELATED DB: PDB REMARK 900 FREE NON-COMPLEXED C.CSP231I PROTEIN DIMER REMARK 900 RELATED ID: 3LIS RELATED DB: PDB REMARK 900 FREE NON-COMPLEXED C.CSP231I PROTEIN DIMER (MONOCLINIC FORM) REMARK 900 RELATED ID: 4JCX RELATED DB: PDB REMARK 900 C.CSP231I OL OPERATOR COMPLEX REMARK 900 RELATED ID: 4JCY RELATED DB: PDB REMARK 900 C.CSP231I OR OPERATOR COMPLEX DBREF 4JQD A 1 98 UNP Q32WH4 Q32WH4_9ENTR 1 98 DBREF 4JQD B 1 98 UNP Q32WH4 Q32WH4_9ENTR 1 98 DBREF 4JQD E 1 98 UNP Q32WH4 Q32WH4_9ENTR 1 98 DBREF 4JQD F 1 98 UNP Q32WH4 Q32WH4_9ENTR 1 98 DBREF 4JQD C 1 21 PDB 4JQD 4JQD 1 21 DBREF 4JQD G 1 21 PDB 4JQD 4JQD 1 21 DBREF 4JQD D 1 21 PDB 4JQD 4JQD 1 21 DBREF 4JQD H 1 21 PDB 4JQD 4JQD 1 21 SEQRES 1 A 98 MET LEU ILE ARG ARG LEU LYS ASP ALA ARG LEU ARG ALA SEQRES 2 A 98 GLY ILE SER GLN GLU LYS LEU GLY VAL LEU ALA GLY ILE SEQRES 3 A 98 ASP GLU ALA SER ALA SER ALA ARG MET ASN GLN TYR GLU SEQRES 4 A 98 LYS GLY LYS HIS ALA PRO ASP PHE GLU MET ALA ASN ARG SEQRES 5 A 98 LEU ALA LYS VAL LEU LYS ILE PRO VAL SER TYR LEU TYR SEQRES 6 A 98 THR PRO GLU ASP ASP LEU ALA GLN ILE ILE LEU THR TRP SEQRES 7 A 98 ASN GLU LEU ASN GLU GLN GLU ARG LYS ARG ILE ASN PHE SEQRES 8 A 98 TYR ILE ARG LYS LYS ALA LYS SEQRES 1 B 98 MET LEU ILE ARG ARG LEU LYS ASP ALA ARG LEU ARG ALA SEQRES 2 B 98 GLY ILE SER GLN GLU LYS LEU GLY VAL LEU ALA GLY ILE SEQRES 3 B 98 ASP GLU ALA SER ALA SER ALA ARG MET ASN GLN TYR GLU SEQRES 4 B 98 LYS GLY LYS HIS ALA PRO ASP PHE GLU MET ALA ASN ARG SEQRES 5 B 98 LEU ALA LYS VAL LEU LYS ILE PRO VAL SER TYR LEU TYR SEQRES 6 B 98 THR PRO GLU ASP ASP LEU ALA GLN ILE ILE LEU THR TRP SEQRES 7 B 98 ASN GLU LEU ASN GLU GLN GLU ARG LYS ARG ILE ASN PHE SEQRES 8 B 98 TYR ILE ARG LYS LYS ALA LYS SEQRES 1 C 21 DA DC DA DC DT DA DA DG DG DA DA DA DA SEQRES 2 C 21 DC DT DT DA DG DT DA DA SEQRES 1 D 21 DT DT DA DC DT DA DA DG DT DT DT DT DC SEQRES 2 D 21 DC DT DT DA DG DT DG DT SEQRES 1 E 98 MET LEU ILE ARG ARG LEU LYS ASP ALA ARG LEU ARG ALA SEQRES 2 E 98 GLY ILE SER GLN GLU LYS LEU GLY VAL LEU ALA GLY ILE SEQRES 3 E 98 ASP GLU ALA SER ALA SER ALA ARG MET ASN GLN TYR GLU SEQRES 4 E 98 LYS GLY LYS HIS ALA PRO ASP PHE GLU MET ALA ASN ARG SEQRES 5 E 98 LEU ALA LYS VAL LEU LYS ILE PRO VAL SER TYR LEU TYR SEQRES 6 E 98 THR PRO GLU ASP ASP LEU ALA GLN ILE ILE LEU THR TRP SEQRES 7 E 98 ASN GLU LEU ASN GLU GLN GLU ARG LYS ARG ILE ASN PHE SEQRES 8 E 98 TYR ILE ARG LYS LYS ALA LYS SEQRES 1 F 98 MET LEU ILE ARG ARG LEU LYS ASP ALA ARG LEU ARG ALA SEQRES 2 F 98 GLY ILE SER GLN GLU LYS LEU GLY VAL LEU ALA GLY ILE SEQRES 3 F 98 ASP GLU ALA SER ALA SER ALA ARG MET ASN GLN TYR GLU SEQRES 4 F 98 LYS GLY LYS HIS ALA PRO ASP PHE GLU MET ALA ASN ARG SEQRES 5 F 98 LEU ALA LYS VAL LEU LYS ILE PRO VAL SER TYR LEU TYR SEQRES 6 F 98 THR PRO GLU ASP ASP LEU ALA GLN ILE ILE LEU THR TRP SEQRES 7 F 98 ASN GLU LEU ASN GLU GLN GLU ARG LYS ARG ILE ASN PHE SEQRES 8 F 98 TYR ILE ARG LYS LYS ALA LYS SEQRES 1 G 21 DA DC DA DC DT DA DA DG DG DA DA DA DA SEQRES 2 G 21 DC DT DT DA DG DT DA DA SEQRES 1 H 21 DT DT DA DC DT DA DA DG DT DT DT DT DC SEQRES 2 H 21 DC DT DT DA DG DT DG DT FORMUL 9 HOH *51(H2 O) HELIX 1 1 LEU A 2 GLY A 14 1 13 HELIX 2 2 SER A 16 ALA A 24 1 9 HELIX 3 3 ASP A 27 LYS A 40 1 14 HELIX 4 4 ASP A 46 LYS A 58 1 13 HELIX 5 5 PRO A 60 THR A 66 5 7 HELIX 6 6 GLU A 68 ASN A 79 1 12 HELIX 7 7 ASN A 82 ARG A 94 1 13 HELIX 8 8 LEU B 2 GLY B 14 1 13 HELIX 9 9 SER B 16 ALA B 24 1 9 HELIX 10 10 ASP B 27 LYS B 40 1 14 HELIX 11 11 ASP B 46 LEU B 57 1 12 HELIX 12 12 PRO B 60 THR B 66 5 7 HELIX 13 13 GLU B 68 GLU B 80 1 13 HELIX 14 14 ASN B 82 ILE B 93 1 12 HELIX 15 15 LEU E 2 GLY E 14 1 13 HELIX 16 16 SER E 16 ALA E 24 1 9 HELIX 17 17 SER E 30 LYS E 40 1 11 HELIX 18 18 ASP E 46 LYS E 58 1 13 HELIX 19 19 PRO E 60 THR E 66 5 7 HELIX 20 20 GLU E 68 ASN E 79 1 12 HELIX 21 21 ASN E 82 LYS E 95 1 14 HELIX 22 22 LEU F 2 GLY F 14 1 13 HELIX 23 23 SER F 16 ALA F 24 1 9 HELIX 24 24 ASP F 27 LYS F 40 1 14 HELIX 25 25 ASP F 46 LEU F 57 1 12 HELIX 26 26 PRO F 60 THR F 66 5 7 HELIX 27 27 GLU F 68 ASN F 79 1 12 HELIX 28 28 ASN F 82 ILE F 93 1 12 CRYST1 82.120 128.070 78.540 90.00 99.99 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012177 0.000000 0.002145 0.00000 SCALE2 0.000000 0.007808 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012928 0.00000 MASTER 397 0 0 28 0 0 0 6 0 0 0 40 END