HEADER UNKNOWN FUNCTION 17-MAR-13 4JO6 TITLE STREPTAVIDIN COMPLEX WITH SBP-TAG COMPND MOL_ID: 1; COMPND 2 MOLECULE: STREPTAVIDIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 25-183; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SBP-TAG; COMPND 7 CHAIN: Y, Z; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES AVIDINII; SOURCE 3 ORGANISM_TAXID: 1895; SOURCE 4 MOL_ID: 2; SOURCE 5 SYNTHETIC: YES; SOURCE 6 OTHER_DETAILS: THE SYNTHETIC PEPTIDE WAS ORIGINALLY ISOLATED FROM AN SOURCE 7 IN VITRO SELECTION AND EVOLUTION EXPERIMENT. KEYWDS HOMOTETRAMER BOUND TO PEPTIDES, BIOTECHNOLOGICAL TARGETING, BIOTIN KEYWDS 2 AND PEPTIDE BINDING, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR I.H.BARRETTE-NG,S.C.WU,W.M.TJIA,S.L.WONG,K.K.S.NG REVDAT 2 26-JUN-13 4JO6 1 JRNL REVDAT 1 01-MAY-13 4JO6 0 JRNL AUTH I.H.BARRETTE-NG,S.C.WU,W.M.TJIA,S.L.WONG,K.K.NG JRNL TITL THE STRUCTURE OF THE SBP-TAG-STREPTAVIDIN COMPLEX REVEALS A JRNL TITL 2 NOVEL HELICAL SCAFFOLD BRIDGING BINDING POCKETS ON SEPARATE JRNL TITL 3 SUBUNITS JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 879 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 23633599 JRNL DOI 10.1107/S0907444913002576 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 52299 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2777 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2943 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.1990 REMARK 3 BIN FREE R VALUE SET COUNT : 159 REMARK 3 BIN FREE R VALUE : 0.2660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3979 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 273 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.56000 REMARK 3 B22 (A**2) : -0.56000 REMARK 3 B33 (A**2) : 1.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.129 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.125 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.386 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4069 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5555 ; 1.188 ; 1.893 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 523 ; 6.612 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 176 ;29.033 ;23.750 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 561 ;13.968 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;20.509 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 613 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3140 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2581 ; 1.641 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4079 ; 2.673 ; 2.500 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1488 ; 3.397 ; 3.500 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1476 ; 4.850 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 134 REMARK 3 ORIGIN FOR THE GROUP (A): 14.6480 4.7150 24.8330 REMARK 3 T TENSOR REMARK 3 T11: 0.1347 T22: 0.1028 REMARK 3 T33: 0.0295 T12: 0.0152 REMARK 3 T13: 0.0098 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 0.7631 L22: 0.7221 REMARK 3 L33: 0.9945 L12: -0.0082 REMARK 3 L13: 0.1293 L23: 0.0178 REMARK 3 S TENSOR REMARK 3 S11: 0.0328 S12: -0.0401 S13: 0.0278 REMARK 3 S21: -0.0160 S22: 0.0644 S23: 0.0877 REMARK 3 S31: -0.1800 S32: -0.0268 S33: -0.0972 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 134 REMARK 3 ORIGIN FOR THE GROUP (A): 25.4710 -6.3240 18.9720 REMARK 3 T TENSOR REMARK 3 T11: 0.1086 T22: 0.1531 REMARK 3 T33: 0.0366 T12: 0.0040 REMARK 3 T13: 0.0022 T23: -0.0223 REMARK 3 L TENSOR REMARK 3 L11: 0.8851 L22: 0.8998 REMARK 3 L33: 0.6240 L12: -0.0255 REMARK 3 L13: 0.2234 L23: 0.1578 REMARK 3 S TENSOR REMARK 3 S11: 0.0156 S12: 0.0581 S13: -0.0889 REMARK 3 S21: -0.0694 S22: 0.1057 S23: -0.0390 REMARK 3 S31: 0.0022 S32: 0.1764 S33: -0.1213 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 15 C 135 REMARK 3 ORIGIN FOR THE GROUP (A): 6.4290 -25.5300 24.2390 REMARK 3 T TENSOR REMARK 3 T11: 0.1453 T22: 0.0994 REMARK 3 T33: 0.0263 T12: 0.0039 REMARK 3 T13: -0.0304 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.8596 L22: 0.8719 REMARK 3 L33: 0.8883 L12: -0.0421 REMARK 3 L13: 0.1483 L23: 0.3287 REMARK 3 S TENSOR REMARK 3 S11: 0.1007 S12: -0.0808 S13: -0.0374 REMARK 3 S21: 0.0722 S22: 0.0252 S23: -0.0951 REMARK 3 S31: 0.2100 S32: 0.0040 S33: -0.1259 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 15 D 134 REMARK 3 ORIGIN FOR THE GROUP (A): -4.7090 -14.6530 18.3350 REMARK 3 T TENSOR REMARK 3 T11: 0.1075 T22: 0.1362 REMARK 3 T33: 0.0326 T12: 0.0156 REMARK 3 T13: 0.0103 T23: 0.0152 REMARK 3 L TENSOR REMARK 3 L11: 0.7664 L22: 0.8218 REMARK 3 L33: 1.1265 L12: 0.0092 REMARK 3 L13: 0.1280 L23: 0.1911 REMARK 3 S TENSOR REMARK 3 S11: 0.0600 S12: -0.0203 S13: 0.0818 REMARK 3 S21: -0.0403 S22: 0.0351 S23: 0.0186 REMARK 3 S31: -0.0321 S32: -0.2014 S33: -0.0951 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Y 11 Y 35 REMARK 3 ORIGIN FOR THE GROUP (A): 10.1910 -9.8820 38.6630 REMARK 3 T TENSOR REMARK 3 T11: 0.2836 T22: 0.3283 REMARK 3 T33: 0.0174 T12: -0.1399 REMARK 3 T13: 0.0228 T23: -0.0489 REMARK 3 L TENSOR REMARK 3 L11: 0.4605 L22: 18.5105 REMARK 3 L33: 8.4135 L12: 0.4875 REMARK 3 L13: -0.3486 L23: 2.3996 REMARK 3 S TENSOR REMARK 3 S11: 0.3217 S12: -0.2797 S13: 0.0589 REMARK 3 S21: 1.0149 S22: -0.2780 S23: -0.0946 REMARK 3 S31: 0.1273 S32: -0.4054 S33: -0.0438 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Z 11 Z 35 REMARK 3 ORIGIN FOR THE GROUP (A): 11.6410 -10.1850 4.6990 REMARK 3 T TENSOR REMARK 3 T11: 0.3139 T22: 0.2559 REMARK 3 T33: 0.0665 T12: -0.1003 REMARK 3 T13: 0.0124 T23: -0.0617 REMARK 3 L TENSOR REMARK 3 L11: 11.5958 L22: 0.5569 REMARK 3 L33: 6.4891 L12: 0.6433 REMARK 3 L13: -1.1873 L23: 0.5883 REMARK 3 S TENSOR REMARK 3 S11: -0.4153 S12: 0.2902 S13: -0.2455 REMARK 3 S21: -0.2738 S22: 0.3484 S23: -0.0953 REMARK 3 S31: -0.1732 S32: 0.0581 S33: 0.0670 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4JO6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAR-13. REMARK 100 THE RCSB ID CODE IS RCSB078292. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52299 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 60.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : 0.06600 REMARK 200 FOR THE DATA SET : 29.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.42400 REMARK 200 R SYM FOR SHELL (I) : 0.42400 REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1SWE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 56% TACSIMATE, 12%(W/V) GLYCEROL, PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.77600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.38800 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 133.16400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -73.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, Z, Y, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 PRO A 2 REMARK 465 SER A 3 REMARK 465 LYS A 4 REMARK 465 ASP A 5 REMARK 465 SER A 6 REMARK 465 LYS A 7 REMARK 465 ALA A 8 REMARK 465 GLN A 9 REMARK 465 VAL A 10 REMARK 465 SER A 11 REMARK 465 ALA A 12 REMARK 465 ALA A 13 REMARK 465 GLU A 14 REMARK 465 PRO A 135 REMARK 465 SER A 136 REMARK 465 ALA A 137 REMARK 465 ALA A 138 REMARK 465 SER A 139 REMARK 465 ILE A 140 REMARK 465 ASP A 141 REMARK 465 ALA A 142 REMARK 465 ALA A 143 REMARK 465 LYS A 144 REMARK 465 LYS A 145 REMARK 465 ALA A 146 REMARK 465 GLY A 147 REMARK 465 VAL A 148 REMARK 465 ASN A 149 REMARK 465 ASN A 150 REMARK 465 GLY A 151 REMARK 465 ASN A 152 REMARK 465 PRO A 153 REMARK 465 LEU A 154 REMARK 465 ASP A 155 REMARK 465 ALA A 156 REMARK 465 VAL A 157 REMARK 465 GLN A 158 REMARK 465 GLN A 159 REMARK 465 ASP B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 LYS B 4 REMARK 465 ASP B 5 REMARK 465 SER B 6 REMARK 465 LYS B 7 REMARK 465 ALA B 8 REMARK 465 GLN B 9 REMARK 465 VAL B 10 REMARK 465 SER B 11 REMARK 465 ALA B 12 REMARK 465 ALA B 13 REMARK 465 GLU B 14 REMARK 465 PRO B 135 REMARK 465 SER B 136 REMARK 465 ALA B 137 REMARK 465 ALA B 138 REMARK 465 SER B 139 REMARK 465 ILE B 140 REMARK 465 ASP B 141 REMARK 465 ALA B 142 REMARK 465 ALA B 143 REMARK 465 LYS B 144 REMARK 465 LYS B 145 REMARK 465 ALA B 146 REMARK 465 GLY B 147 REMARK 465 VAL B 148 REMARK 465 ASN B 149 REMARK 465 ASN B 150 REMARK 465 GLY B 151 REMARK 465 ASN B 152 REMARK 465 PRO B 153 REMARK 465 LEU B 154 REMARK 465 ASP B 155 REMARK 465 ALA B 156 REMARK 465 VAL B 157 REMARK 465 GLN B 158 REMARK 465 GLN B 159 REMARK 465 ASP C 1 REMARK 465 PRO C 2 REMARK 465 SER C 3 REMARK 465 LYS C 4 REMARK 465 ASP C 5 REMARK 465 SER C 6 REMARK 465 LYS C 7 REMARK 465 ALA C 8 REMARK 465 GLN C 9 REMARK 465 VAL C 10 REMARK 465 SER C 11 REMARK 465 ALA C 12 REMARK 465 ALA C 13 REMARK 465 GLU C 14 REMARK 465 SER C 136 REMARK 465 ALA C 137 REMARK 465 ALA C 138 REMARK 465 SER C 139 REMARK 465 ILE C 140 REMARK 465 ASP C 141 REMARK 465 ALA C 142 REMARK 465 ALA C 143 REMARK 465 LYS C 144 REMARK 465 LYS C 145 REMARK 465 ALA C 146 REMARK 465 GLY C 147 REMARK 465 VAL C 148 REMARK 465 ASN C 149 REMARK 465 ASN C 150 REMARK 465 GLY C 151 REMARK 465 ASN C 152 REMARK 465 PRO C 153 REMARK 465 LEU C 154 REMARK 465 ASP C 155 REMARK 465 ALA C 156 REMARK 465 VAL C 157 REMARK 465 GLN C 158 REMARK 465 GLN C 159 REMARK 465 ASP D 1 REMARK 465 PRO D 2 REMARK 465 SER D 3 REMARK 465 LYS D 4 REMARK 465 ASP D 5 REMARK 465 SER D 6 REMARK 465 LYS D 7 REMARK 465 ALA D 8 REMARK 465 GLN D 9 REMARK 465 VAL D 10 REMARK 465 SER D 11 REMARK 465 ALA D 12 REMARK 465 ALA D 13 REMARK 465 GLU D 14 REMARK 465 PRO D 135 REMARK 465 SER D 136 REMARK 465 ALA D 137 REMARK 465 ALA D 138 REMARK 465 SER D 139 REMARK 465 ILE D 140 REMARK 465 ASP D 141 REMARK 465 ALA D 142 REMARK 465 ALA D 143 REMARK 465 LYS D 144 REMARK 465 LYS D 145 REMARK 465 ALA D 146 REMARK 465 GLY D 147 REMARK 465 VAL D 148 REMARK 465 ASN D 149 REMARK 465 ASN D 150 REMARK 465 GLY D 151 REMARK 465 ASN D 152 REMARK 465 PRO D 153 REMARK 465 LEU D 154 REMARK 465 ASP D 155 REMARK 465 ALA D 156 REMARK 465 VAL D 157 REMARK 465 GLN D 158 REMARK 465 GLN D 159 REMARK 465 MET Y 1 REMARK 465 ASP Y 2 REMARK 465 GLU Y 3 REMARK 465 LYS Y 4 REMARK 465 THR Y 5 REMARK 465 THR Y 6 REMARK 465 GLY Y 7 REMARK 465 TRP Y 8 REMARK 465 ARG Y 9 REMARK 465 GLY Y 10 REMARK 465 ARG Y 36 REMARK 465 GLU Y 37 REMARK 465 PRO Y 38 REMARK 465 MET Z 1 REMARK 465 ASP Z 2 REMARK 465 GLU Z 3 REMARK 465 LYS Z 4 REMARK 465 THR Z 5 REMARK 465 THR Z 6 REMARK 465 GLY Z 7 REMARK 465 TRP Z 8 REMARK 465 ARG Z 9 REMARK 465 GLY Z 10 REMARK 465 ARG Z 36 REMARK 465 GLU Z 37 REMARK 465 PRO Z 38 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 79 49.84 -84.61 REMARK 500 ASN A 81 -158.38 -130.49 REMARK 500 GLU A 101 72.88 -117.22 REMARK 500 GLU B 101 71.47 -114.54 REMARK 500 GLU C 101 75.60 -118.92 REMARK 500 ASN D 81 -158.61 -131.11 REMARK 500 GLU D 101 75.79 -114.45 REMARK 500 VAL Z 14 -60.99 -127.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SWE RELATED DB: PDB REMARK 900 STREPTAVIDIN COMPLEX WITH BIOTIN DBREF 4JO6 A 1 159 UNP P22629 SAV_STRAV 25 183 DBREF 4JO6 B 1 159 UNP P22629 SAV_STRAV 25 183 DBREF 4JO6 C 1 159 UNP P22629 SAV_STRAV 25 183 DBREF 4JO6 D 1 159 UNP P22629 SAV_STRAV 25 183 DBREF 4JO6 Y 1 38 PDB 4JO6 4JO6 1 38 DBREF 4JO6 Z 1 38 PDB 4JO6 4JO6 1 38 SEQRES 1 A 159 ASP PRO SER LYS ASP SER LYS ALA GLN VAL SER ALA ALA SEQRES 2 A 159 GLU ALA GLY ILE THR GLY THR TRP TYR ASN GLN LEU GLY SEQRES 3 A 159 SER THR PHE ILE VAL THR ALA GLY ALA ASP GLY ALA LEU SEQRES 4 A 159 THR GLY THR TYR GLU SER ALA VAL GLY ASN ALA GLU SER SEQRES 5 A 159 ARG TYR VAL LEU THR GLY ARG TYR ASP SER ALA PRO ALA SEQRES 6 A 159 THR ASP GLY SER GLY THR ALA LEU GLY TRP THR VAL ALA SEQRES 7 A 159 TRP LYS ASN ASN TYR ARG ASN ALA HIS SER ALA THR THR SEQRES 8 A 159 TRP SER GLY GLN TYR VAL GLY GLY ALA GLU ALA ARG ILE SEQRES 9 A 159 ASN THR GLN TRP LEU LEU THR SER GLY THR THR GLU ALA SEQRES 10 A 159 ASN ALA TRP LYS SER THR LEU VAL GLY HIS ASP THR PHE SEQRES 11 A 159 THR LYS VAL LYS PRO SER ALA ALA SER ILE ASP ALA ALA SEQRES 12 A 159 LYS LYS ALA GLY VAL ASN ASN GLY ASN PRO LEU ASP ALA SEQRES 13 A 159 VAL GLN GLN SEQRES 1 B 159 ASP PRO SER LYS ASP SER LYS ALA GLN VAL SER ALA ALA SEQRES 2 B 159 GLU ALA GLY ILE THR GLY THR TRP TYR ASN GLN LEU GLY SEQRES 3 B 159 SER THR PHE ILE VAL THR ALA GLY ALA ASP GLY ALA LEU SEQRES 4 B 159 THR GLY THR TYR GLU SER ALA VAL GLY ASN ALA GLU SER SEQRES 5 B 159 ARG TYR VAL LEU THR GLY ARG TYR ASP SER ALA PRO ALA SEQRES 6 B 159 THR ASP GLY SER GLY THR ALA LEU GLY TRP THR VAL ALA SEQRES 7 B 159 TRP LYS ASN ASN TYR ARG ASN ALA HIS SER ALA THR THR SEQRES 8 B 159 TRP SER GLY GLN TYR VAL GLY GLY ALA GLU ALA ARG ILE SEQRES 9 B 159 ASN THR GLN TRP LEU LEU THR SER GLY THR THR GLU ALA SEQRES 10 B 159 ASN ALA TRP LYS SER THR LEU VAL GLY HIS ASP THR PHE SEQRES 11 B 159 THR LYS VAL LYS PRO SER ALA ALA SER ILE ASP ALA ALA SEQRES 12 B 159 LYS LYS ALA GLY VAL ASN ASN GLY ASN PRO LEU ASP ALA SEQRES 13 B 159 VAL GLN GLN SEQRES 1 C 159 ASP PRO SER LYS ASP SER LYS ALA GLN VAL SER ALA ALA SEQRES 2 C 159 GLU ALA GLY ILE THR GLY THR TRP TYR ASN GLN LEU GLY SEQRES 3 C 159 SER THR PHE ILE VAL THR ALA GLY ALA ASP GLY ALA LEU SEQRES 4 C 159 THR GLY THR TYR GLU SER ALA VAL GLY ASN ALA GLU SER SEQRES 5 C 159 ARG TYR VAL LEU THR GLY ARG TYR ASP SER ALA PRO ALA SEQRES 6 C 159 THR ASP GLY SER GLY THR ALA LEU GLY TRP THR VAL ALA SEQRES 7 C 159 TRP LYS ASN ASN TYR ARG ASN ALA HIS SER ALA THR THR SEQRES 8 C 159 TRP SER GLY GLN TYR VAL GLY GLY ALA GLU ALA ARG ILE SEQRES 9 C 159 ASN THR GLN TRP LEU LEU THR SER GLY THR THR GLU ALA SEQRES 10 C 159 ASN ALA TRP LYS SER THR LEU VAL GLY HIS ASP THR PHE SEQRES 11 C 159 THR LYS VAL LYS PRO SER ALA ALA SER ILE ASP ALA ALA SEQRES 12 C 159 LYS LYS ALA GLY VAL ASN ASN GLY ASN PRO LEU ASP ALA SEQRES 13 C 159 VAL GLN GLN SEQRES 1 D 159 ASP PRO SER LYS ASP SER LYS ALA GLN VAL SER ALA ALA SEQRES 2 D 159 GLU ALA GLY ILE THR GLY THR TRP TYR ASN GLN LEU GLY SEQRES 3 D 159 SER THR PHE ILE VAL THR ALA GLY ALA ASP GLY ALA LEU SEQRES 4 D 159 THR GLY THR TYR GLU SER ALA VAL GLY ASN ALA GLU SER SEQRES 5 D 159 ARG TYR VAL LEU THR GLY ARG TYR ASP SER ALA PRO ALA SEQRES 6 D 159 THR ASP GLY SER GLY THR ALA LEU GLY TRP THR VAL ALA SEQRES 7 D 159 TRP LYS ASN ASN TYR ARG ASN ALA HIS SER ALA THR THR SEQRES 8 D 159 TRP SER GLY GLN TYR VAL GLY GLY ALA GLU ALA ARG ILE SEQRES 9 D 159 ASN THR GLN TRP LEU LEU THR SER GLY THR THR GLU ALA SEQRES 10 D 159 ASN ALA TRP LYS SER THR LEU VAL GLY HIS ASP THR PHE SEQRES 11 D 159 THR LYS VAL LYS PRO SER ALA ALA SER ILE ASP ALA ALA SEQRES 12 D 159 LYS LYS ALA GLY VAL ASN ASN GLY ASN PRO LEU ASP ALA SEQRES 13 D 159 VAL GLN GLN SEQRES 1 Y 38 MET ASP GLU LYS THR THR GLY TRP ARG GLY GLY HIS VAL SEQRES 2 Y 38 VAL GLU GLY LEU ALA GLY GLU LEU GLU GLN LEU ARG ALA SEQRES 3 Y 38 ARG LEU GLU HIS HIS PRO GLN GLY GLN ARG GLU PRO SEQRES 1 Z 38 MET ASP GLU LYS THR THR GLY TRP ARG GLY GLY HIS VAL SEQRES 2 Z 38 VAL GLU GLY LEU ALA GLY GLU LEU GLU GLN LEU ARG ALA SEQRES 3 Z 38 ARG LEU GLU HIS HIS PRO GLN GLY GLN ARG GLU PRO FORMUL 7 HOH *273(H2 O) HELIX 1 1 ASN A 49 GLU A 51 5 3 HELIX 2 2 THR A 115 LYS A 121 5 7 HELIX 3 3 ASN B 49 GLU B 51 5 3 HELIX 4 4 ASN B 118 LYS B 121 5 4 HELIX 5 5 ASN C 49 GLU C 51 5 3 HELIX 6 6 ASN C 118 LYS C 121 5 4 HELIX 7 7 ASN D 49 GLU D 51 5 3 HELIX 8 8 THR D 115 LYS D 121 5 7 HELIX 9 9 GLY Y 16 LEU Y 28 1 13 HELIX 10 10 HIS Y 31 GLN Y 35 5 5 HELIX 11 11 GLY Z 16 LEU Z 28 1 13 SHEET 1 A 9 GLY A 19 TYR A 22 0 SHEET 2 A 9 THR A 28 ALA A 33 -1 O PHE A 29 N TRP A 21 SHEET 3 A 9 ALA A 38 GLU A 44 -1 O GLU A 44 N THR A 28 SHEET 4 A 9 ARG A 53 TYR A 60 -1 O TYR A 54 N TYR A 43 SHEET 5 A 9 THR A 71 LYS A 80 -1 O THR A 76 N THR A 57 SHEET 6 A 9 ASN A 85 VAL A 97 -1 O SER A 88 N TRP A 79 SHEET 7 A 9 ARG A 103 SER A 112 -1 O ARG A 103 N VAL A 97 SHEET 8 A 9 THR A 123 THR A 131 -1 O LEU A 124 N LEU A 110 SHEET 9 A 9 GLY A 19 TYR A 22 -1 N TYR A 22 O THR A 131 SHEET 1 B 9 GLY B 19 TYR B 22 0 SHEET 2 B 9 THR B 28 ALA B 33 -1 O PHE B 29 N TRP B 21 SHEET 3 B 9 ALA B 38 GLU B 44 -1 O THR B 40 N THR B 32 SHEET 4 B 9 ARG B 53 TYR B 60 -1 O TYR B 54 N TYR B 43 SHEET 5 B 9 THR B 71 LYS B 80 -1 O THR B 76 N THR B 57 SHEET 6 B 9 ASN B 85 VAL B 97 -1 O TYR B 96 N THR B 71 SHEET 7 B 9 ARG B 103 SER B 112 -1 O ARG B 103 N VAL B 97 SHEET 8 B 9 THR B 123 THR B 131 -1 O PHE B 130 N ILE B 104 SHEET 9 B 9 GLY B 19 TYR B 22 -1 N TYR B 22 O THR B 131 SHEET 1 C 9 GLY C 19 TYR C 22 0 SHEET 2 C 9 THR C 28 ALA C 33 -1 O PHE C 29 N TRP C 21 SHEET 3 C 9 ALA C 38 GLU C 44 -1 O THR C 40 N THR C 32 SHEET 4 C 9 ARG C 53 TYR C 60 -1 O TYR C 54 N TYR C 43 SHEET 5 C 9 THR C 71 LYS C 80 -1 O THR C 76 N THR C 57 SHEET 6 C 9 ASN C 85 VAL C 97 -1 O TYR C 96 N THR C 71 SHEET 7 C 9 ARG C 103 SER C 112 -1 O ARG C 103 N VAL C 97 SHEET 8 C 9 THR C 123 THR C 131 -1 O PHE C 130 N ILE C 104 SHEET 9 C 9 GLY C 19 TYR C 22 -1 N TYR C 22 O THR C 131 SHEET 1 D 9 GLY D 19 TYR D 22 0 SHEET 2 D 9 THR D 28 ALA D 33 -1 O PHE D 29 N TRP D 21 SHEET 3 D 9 ALA D 38 GLU D 44 -1 O GLU D 44 N THR D 28 SHEET 4 D 9 ARG D 53 TYR D 60 -1 O TYR D 54 N TYR D 43 SHEET 5 D 9 THR D 71 LYS D 80 -1 O THR D 76 N THR D 57 SHEET 6 D 9 ASN D 85 VAL D 97 -1 O THR D 90 N VAL D 77 SHEET 7 D 9 ARG D 103 SER D 112 -1 O ARG D 103 N VAL D 97 SHEET 8 D 9 THR D 123 THR D 131 -1 O LEU D 124 N LEU D 110 SHEET 9 D 9 GLY D 19 TYR D 22 -1 N TYR D 22 O THR D 131 CRYST1 57.523 57.523 177.552 90.00 90.00 90.00 P 41 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017384 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017384 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005632 0.00000 MASTER 562 0 0 11 36 0 0 6 0 0 0 58 END