HEADER TRANSFERASE/UNKNOWN FUNCTION 16-FEB-13 4J9F TITLE CRYSTAL STRUCTURE OF THE ABL-SH3 DOMAIN COMPLEXED WITH THE HIGH TITLE 2 AFFINITY PEPTIDE P0 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE ABL1; COMPND 3 CHAIN: A, C, E; COMPND 4 FRAGMENT: SH3 DOMAIN (UNP RESIDUES 60-121); COMPND 5 SYNONYM: ABELSON MURINE LEUKEMIA VIRAL ONCOGENE HOMOLOG 1, ABELSON COMPND 6 TYROSINE-PROTEIN KINASE 1, PROTO-ONCOGENE C-ABL, P150; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: P0; COMPND 11 CHAIN: B, D, F; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ABL, ABL1, JTK7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES KEYWDS BETA SHANDWICH, SH3 DOMAIN, KINASE, POLY PROLINE RICH MOTIFS, KEYWDS 2 TRANSFERASE, TRANSFERASE-UNKNOWN FUNCTION COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.CAMARA-ARTIGAS REVDAT 1 29-JAN-14 4J9F 0 JRNL AUTH A.CAMARA-ARTIGAS JRNL TITL CRYSTAL STRUCTURE OF THE ABL-SH3 DOMAIN COMPLEXED WITH THE JRNL TITL 2 HIGH AFFINITY PEPTIDE P0 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.CAMARA-ARTIGAS,A.PALENCIA,J.C.MARTINEZ,I.LUQUE,J.A.GAVIRA, REMARK 1 AUTH 2 J.M.GARCIA-RUIZ REMARK 1 TITL CRYSTALLIZATION BY CAPILLARY COUNTER-DIFFUSION AND STRUCTURE REMARK 1 TITL 2 DETERMINATION OF THE N114A MUTANT OF THE SH3 DOMAIN OF ABL REMARK 1 TITL 3 TYROSINE KINASE COMPLEXED WITH A HIGH-AFFINITY PEPTIDE REMARK 1 TITL 4 LIGAND. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 63 646 2007 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 17452790 REMARK 1 DOI 10.1107/S0907444907011109 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.PALENCIA,A.CAMARA-ARTIGAS,M.T.PISABARRO,J.C.MARTINEZ, REMARK 1 AUTH 2 I.LUQUE REMARK 1 TITL ROLE OF INTERFACIAL WATER MOLECULES IN PROLINE-RICH LIGAND REMARK 1 TITL 2 RECOGNITION BY THE SRC HOMOLOGY 3 DOMAIN OF ABL. REMARK 1 REF J.BIOL.CHEM. V. 285 2823 2010 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 19906645 REMARK 1 DOI 10.1074/JBC.M109.048033 REMARK 2 REMARK 2 RESOLUTION. 1.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 77420 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.169 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 3893 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.8431 - 3.3183 0.90 2583 125 0.2011 0.2140 REMARK 3 2 3.3183 - 2.6353 0.99 2727 149 0.1720 0.1816 REMARK 3 3 2.6353 - 2.3026 0.97 2704 146 0.1588 0.1818 REMARK 3 4 2.3026 - 2.0923 0.99 2712 157 0.1382 0.1602 REMARK 3 5 2.0923 - 1.9424 0.99 2682 152 0.1304 0.1493 REMARK 3 6 1.9424 - 1.8279 0.99 2727 144 0.1343 0.1534 REMARK 3 7 1.8279 - 1.7364 0.99 2683 139 0.1301 0.1492 REMARK 3 8 1.7364 - 1.6609 0.98 2694 134 0.1258 0.1513 REMARK 3 9 1.6609 - 1.5969 0.98 2651 141 0.1266 0.1569 REMARK 3 10 1.5969 - 1.5419 0.98 2675 147 0.1209 0.1679 REMARK 3 11 1.5419 - 1.4937 0.98 2645 147 0.1150 0.1467 REMARK 3 12 1.4937 - 1.4510 0.98 2645 150 0.1179 0.1444 REMARK 3 13 1.4510 - 1.4128 0.98 2642 132 0.1136 0.1434 REMARK 3 14 1.4128 - 1.3783 0.97 2641 141 0.1148 0.1551 REMARK 3 15 1.3783 - 1.3470 0.97 2644 132 0.1189 0.1578 REMARK 3 16 1.3470 - 1.3183 0.97 2616 119 0.1224 0.1316 REMARK 3 17 1.3183 - 1.2920 0.97 2608 139 0.1220 0.1686 REMARK 3 18 1.2920 - 1.2676 0.96 2608 140 0.1244 0.1539 REMARK 3 19 1.2676 - 1.2449 0.96 2608 131 0.1339 0.1416 REMARK 3 20 1.2449 - 1.2238 0.97 2569 155 0.1416 0.1706 REMARK 3 21 1.2238 - 1.2041 0.95 2553 144 0.1498 0.1842 REMARK 3 22 1.2041 - 1.1856 0.96 2599 131 0.1350 0.1806 REMARK 3 23 1.1856 - 1.1681 0.95 2555 121 0.1370 0.1337 REMARK 3 24 1.1681 - 1.1517 0.96 2592 141 0.1390 0.1546 REMARK 3 25 1.1517 - 1.1361 0.95 2547 139 0.1353 0.1721 REMARK 3 26 1.1361 - 1.1214 0.95 2539 136 0.1472 0.1673 REMARK 3 27 1.1214 - 1.1074 0.94 2511 140 0.1827 0.1994 REMARK 3 28 1.1074 - 1.0940 0.94 2567 121 0.2180 0.2629 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.090 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 6.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1726 REMARK 3 ANGLE : 1.386 2370 REMARK 3 CHIRALITY : 0.080 250 REMARK 3 PLANARITY : 0.007 316 REMARK 3 DIHEDRAL : 11.608 624 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4J9F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-FEB-13. REMARK 100 THE RCSB ID CODE IS RCSB077762. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : CHANNEL CUT ESRF MONOCHROMATOR REMARK 200 AND TORODIAL FOCUSING MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77433 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.094 REMARK 200 RESOLUTION RANGE LOW (A) : 74.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 19.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 8.70 REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2O88 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULPHATE, 5% PEG300, 0.05M REMARK 280 LITIUM FORMATE, 10 % GLYCEROL, 0.1M MOPS , PH 7, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.10667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 15.05333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 15.05333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 30.10667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE COMPLEX BETWEEN ONE MOLECULE OF SH3 REMARK 300 DOMAIN AND THE PEPTIDE REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 222 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 255 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 202 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 250 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 121 REMARK 465 MET C 59 REMARK 465 GLU C 60 REMARK 465 ASN C 61 REMARK 465 ASP C 62 REMARK 465 PRO C 63 REMARK 465 SER C 121 REMARK 465 MET E 59 REMARK 465 GLU E 60 REMARK 465 ASN E 61 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ALA B 1 C PRO B 2 N 0.197 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ALA B 1 -14.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL E 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN B OF P0 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN D OF P0 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN F OF P0 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2O88 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N114A MUTANT OF ABL-SH3 DOMAIN REMARK 900 COMPLEXED WITH A DESIGNED HIGH-AFFINITY PEPTIDE LIGAND: REMARK 900 IMPLICATIONS FOR SH3-LIGAND INTERACTIONS REMARK 900 RELATED ID: 3EG0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N114T MUTANT OF ABL-SH3 DOMAIN REMARK 900 RELATED ID: 3EG1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N114Q MUTANT OF ABL-SH3 DOMAIN REMARK 900 COMPLEXED WITH A DESIGNED HIGH-AFFINITY PEPTIDE LIGAND: REMARK 900 IMPLICATIONS FOR SH3-LIGAND INTERACTIONS REMARK 900 RELATED ID: 3EG2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N114Q MUTANT OF ABL-SH3 DOMAIN REMARK 900 RELATED ID: 3EG3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N114A MUTANT OF ABL-SH3 DOMAIN REMARK 900 RELATED ID: 3EGU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N114A MUTANT OF ABL-SH3 DOMAIN REMARK 900 RELATED ID: 4J9G RELATED DB: PDB REMARK 900 RELATED ID: 4J9H RELATED DB: PDB REMARK 900 RELATED ID: 4J9I RELATED DB: PDB DBREF 4J9F A 60 121 UNP P00519 ABL1_HUMAN 60 121 DBREF 4J9F C 60 121 UNP P00519 ABL1_HUMAN 60 121 DBREF 4J9F E 60 121 UNP P00519 ABL1_HUMAN 60 121 DBREF 4J9F B 0 10 PDB 4J9F 4J9F 0 10 DBREF 4J9F D 0 10 PDB 4J9F 4J9F 0 10 DBREF 4J9F F 0 10 PDB 4J9F 4J9F 0 10 SEQADV 4J9F MET A 59 UNP P00519 INITIATING METHIONINE SEQADV 4J9F MET C 59 UNP P00519 INITIATING METHIONINE SEQADV 4J9F MET E 59 UNP P00519 INITIATING METHIONINE SEQRES 1 A 63 MET GLU ASN ASP PRO ASN LEU PHE VAL ALA LEU TYR ASP SEQRES 2 A 63 PHE VAL ALA SER GLY ASP ASN THR LEU SER ILE THR LYS SEQRES 3 A 63 GLY GLU LYS LEU ARG VAL LEU GLY TYR ASN HIS ASN GLY SEQRES 4 A 63 GLU TRP CYS GLU ALA GLN THR LYS ASN GLY GLN GLY TRP SEQRES 5 A 63 VAL PRO SER ASN TYR ILE THR PRO VAL ASN SER SEQRES 1 B 11 ACE ALA PRO THR TYR PRO PRO PRO LEU PRO PRO SEQRES 1 C 63 MET GLU ASN ASP PRO ASN LEU PHE VAL ALA LEU TYR ASP SEQRES 2 C 63 PHE VAL ALA SER GLY ASP ASN THR LEU SER ILE THR LYS SEQRES 3 C 63 GLY GLU LYS LEU ARG VAL LEU GLY TYR ASN HIS ASN GLY SEQRES 4 C 63 GLU TRP CYS GLU ALA GLN THR LYS ASN GLY GLN GLY TRP SEQRES 5 C 63 VAL PRO SER ASN TYR ILE THR PRO VAL ASN SER SEQRES 1 D 11 ACE ALA PRO THR TYR PRO PRO PRO LEU PRO PRO SEQRES 1 E 63 MET GLU ASN ASP PRO ASN LEU PHE VAL ALA LEU TYR ASP SEQRES 2 E 63 PHE VAL ALA SER GLY ASP ASN THR LEU SER ILE THR LYS SEQRES 3 E 63 GLY GLU LYS LEU ARG VAL LEU GLY TYR ASN HIS ASN GLY SEQRES 4 E 63 GLU TRP CYS GLU ALA GLN THR LYS ASN GLY GLN GLY TRP SEQRES 5 E 63 VAL PRO SER ASN TYR ILE THR PRO VAL ASN SER SEQRES 1 F 11 ACE ALA PRO THR TYR PRO PRO PRO LEU PRO PRO HET ACE B 0 3 HET ACE D 0 3 HET ACE F 0 3 HET SO4 E 201 5 HET GOL E 202 6 HETNAM ACE ACETYL GROUP HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ACE 3(C2 H4 O) FORMUL 7 SO4 O4 S 2- FORMUL 8 GOL C3 H8 O3 FORMUL 9 HOH *222(H2 O) SHEET 1 A 5 GLY A 107 PRO A 112 0 SHEET 2 A 5 TRP A 99 THR A 104 -1 N CYS A 100 O VAL A 111 SHEET 3 A 5 LYS A 87 TYR A 93 -1 N LEU A 91 O GLU A 101 SHEET 4 A 5 LEU A 65 ALA A 68 -1 N PHE A 66 O LEU A 88 SHEET 5 A 5 ILE A 116 VAL A 119 -1 O THR A 117 N VAL A 67 SHEET 1 B 5 GLY C 107 PRO C 112 0 SHEET 2 B 5 TRP C 99 THR C 104 -1 N CYS C 100 O VAL C 111 SHEET 3 B 5 LYS C 87 TYR C 93 -1 N LEU C 91 O GLU C 101 SHEET 4 B 5 PHE C 66 ALA C 68 -1 N PHE C 66 O LEU C 88 SHEET 5 B 5 ILE C 116 PRO C 118 -1 O THR C 117 N VAL C 67 SHEET 1 C 5 GLY E 107 PRO E 112 0 SHEET 2 C 5 TRP E 99 THR E 104 -1 N CYS E 100 O VAL E 111 SHEET 3 C 5 LYS E 87 TYR E 93 -1 N LEU E 91 O GLU E 101 SHEET 4 C 5 LEU E 65 ALA E 68 -1 N PHE E 66 O LEU E 88 SHEET 5 C 5 ILE E 116 PRO E 118 -1 O THR E 117 N VAL E 67 LINK C ACE B 0 N ALA B 1 1555 1555 1.33 LINK C ACE D 0 N ALA D 1 1555 1555 1.31 LINK C ACE F 0 N ALA F 1 1555 1555 1.32 CISPEP 1 PRO F 9 PRO F 10 0 -5.91 SITE 1 AC1 6 ASN A 120 GLU E 86 LYS E 87 LYS E 105 SITE 2 AC1 6 HOH E 350 HOH E 366 SITE 1 AC2 10 LEU C 91 GLY C 92 GLU C 101 HOH C 204 SITE 2 AC2 10 HOH C 211 HOH C 253 LEU E 91 GLY E 92 SITE 3 AC2 10 GLU E 101 HOH E 365 SITE 1 AC3 25 TYR A 70 SER A 75 ASP A 77 THR A 79 SITE 2 AC3 25 LYS A 84 ASN A 94 GLU A 98 TRP A 99 SITE 3 AC3 25 LYS A 105 ASN A 106 TRP A 110 ASN A 114 SITE 4 AC3 25 TYR A 115 HOH A 210 HOH A 251 HOH B 102 SITE 5 AC3 25 HOH B 103 HOH B 104 HOH B 106 HOH B 107 SITE 6 AC3 25 HOH B 108 HOH B 109 HOH B 111 HOH B 112 SITE 7 AC3 25 SER E 121 SITE 1 AC4 29 TYR C 70 SER C 75 ASP C 77 ASN C 78 SITE 2 AC4 29 THR C 79 ASN C 94 GLU C 98 TRP C 99 SITE 3 AC4 29 LYS C 105 ASN C 106 TRP C 110 ASN C 114 SITE 4 AC4 29 TYR C 115 HOH C 206 HOH C 260 HOH C 261 SITE 5 AC4 29 HOH C 262 HOH D 101 HOH D 103 HOH D 105 SITE 6 AC4 29 HOH D 108 HOH D 109 HOH D 112 HOH D 113 SITE 7 AC4 29 TYR E 70 LYS E 84 HOH E 302 HOH E 349 SITE 8 AC4 29 HOH E 353 SITE 1 AC5 26 LYS C 84 HOH C 209 HOH C 229 HOH C 231 SITE 2 AC5 26 HOH C 242 TYR E 70 SER E 75 ASP E 77 SITE 3 AC5 26 THR E 79 ASN E 94 GLU E 98 TRP E 99 SITE 4 AC5 26 ASN E 106 TRP E 110 PRO E 112 ASN E 114 SITE 5 AC5 26 TYR E 115 HOH E 312 HOH E 317 HOH E 325 SITE 6 AC5 26 HOH E 362 HOH F 101 HOH F 102 HOH F 104 SITE 7 AC5 26 HOH F 106 HOH F 107 CRYST1 86.429 86.429 45.160 90.00 90.00 120.00 P 32 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011570 0.006680 0.000000 0.00000 SCALE2 0.000000 0.013360 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022143 0.00000 MASTER 380 0 5 0 15 0 27 6 0 0 0 18 END