HEADER OXIDOREDUCTASE/SUBSTRATE 11-FEB-13 4J6B TITLE THE 2.2 A CRYSTAL STRUCTURE OF CYP154C5 FROM NOCARDIA FARCINICA IN TITLE 2 COMPLEX WITH PREGNENOLONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME P450 MONOOXYGENASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOCARDIA FARCINICA; SOURCE 3 ORGANISM_TAXID: 247156; SOURCE 4 STRAIN: IFM 10152; SOURCE 5 GENE: NFA_53110; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C43 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS CYTOCHROM P450, STEROID HYDROXYLATING MONOOXYGENASE, STEROID BINDING, KEYWDS 2 OXIDOREDUCTASE-SUBSTRATE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.HERZOG,K.M.HOFFMANN REVDAT 2 12-NOV-14 4J6B 1 JRNL REVDAT 1 05-MAR-14 4J6B 0 JRNL AUTH K.HERZOG,P.BRACCO,A.ONODA,T.HAYASHI,K.HOFFMANN,A.SCHALLMEY JRNL TITL ENZYME-SUBSTRATE COMPLEX STRUCTURES OF CYP154C5 SHED LIGHT JRNL TITL 2 ON ITS MODE OF HIGHLY SELECTIVE STEROID HYDROXYLATION. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 2875 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 25372679 JRNL DOI 10.1107/S1399004714019129 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 82.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 43846 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2204 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3025 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2150 REMARK 3 BIN FREE R VALUE SET COUNT : 192 REMARK 3 BIN FREE R VALUE : 0.2450 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6215 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 147 REMARK 3 SOLVENT ATOMS : 490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.22000 REMARK 3 B22 (A**2) : -1.22000 REMARK 3 B33 (A**2) : 1.83000 REMARK 3 B12 (A**2) : -0.61000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.244 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.184 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.134 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.457 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6558 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4329 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8984 ; 1.658 ; 1.999 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10536 ; 0.762 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 816 ; 5.451 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 264 ;34.286 ;23.030 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1025 ;13.349 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 56 ;14.627 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1045 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7299 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1334 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 0 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 2783 ; 0.090 ; 0.500 REMARK 3 TIGHT THERMAL 1 A (A**2): 2359 ; 2.320 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 2783 ; 2.590 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 34 REMARK 3 ORIGIN FOR THE GROUP (A): 20.3870 8.1610 -9.0220 REMARK 3 T TENSOR REMARK 3 T11: 0.0473 T22: 0.0690 REMARK 3 T33: 0.1407 T12: 0.0517 REMARK 3 T13: 0.0359 T23: 0.0188 REMARK 3 L TENSOR REMARK 3 L11: 0.4560 L22: 2.7512 REMARK 3 L33: 1.3158 L12: 0.2020 REMARK 3 L13: 0.7589 L23: -0.0379 REMARK 3 S TENSOR REMARK 3 S11: -0.0211 S12: -0.0907 S13: 0.0075 REMARK 3 S21: 0.0843 S22: 0.0368 S23: 0.1774 REMARK 3 S31: -0.0495 S32: -0.1614 S33: -0.0157 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 35 A 97 REMARK 3 ORIGIN FOR THE GROUP (A): 38.2920 7.0290 -15.3430 REMARK 3 T TENSOR REMARK 3 T11: 0.0844 T22: 0.0437 REMARK 3 T33: 0.0822 T12: 0.0093 REMARK 3 T13: 0.0455 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.4532 L22: 0.6551 REMARK 3 L33: 0.5381 L12: 0.3571 REMARK 3 L13: 0.1941 L23: 0.2140 REMARK 3 S TENSOR REMARK 3 S11: 0.0758 S12: 0.0132 S13: 0.0614 REMARK 3 S21: -0.0012 S22: 0.0432 S23: -0.0135 REMARK 3 S31: -0.0982 S32: 0.0433 S33: -0.1190 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 98 A 113 REMARK 3 ORIGIN FOR THE GROUP (A): 42.9250 -8.2560 -31.7650 REMARK 3 T TENSOR REMARK 3 T11: 0.0970 T22: 0.1332 REMARK 3 T33: 0.0319 T12: -0.0167 REMARK 3 T13: 0.0035 T23: 0.0154 REMARK 3 L TENSOR REMARK 3 L11: 3.7263 L22: 3.7499 REMARK 3 L33: 2.4189 L12: 3.0319 REMARK 3 L13: 1.5687 L23: 2.7776 REMARK 3 S TENSOR REMARK 3 S11: -0.2019 S12: 0.2705 S13: 0.1201 REMARK 3 S21: -0.0311 S22: 0.3138 S23: -0.0430 REMARK 3 S31: 0.0810 S32: 0.2162 S33: -0.1119 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 114 A 204 REMARK 3 ORIGIN FOR THE GROUP (A): 35.4410 -19.3580 -12.5960 REMARK 3 T TENSOR REMARK 3 T11: 0.0740 T22: 0.0899 REMARK 3 T33: 0.0426 T12: 0.0066 REMARK 3 T13: -0.0031 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.1805 L22: 0.4695 REMARK 3 L33: 0.1425 L12: 0.2157 REMARK 3 L13: -0.0097 L23: 0.1115 REMARK 3 S TENSOR REMARK 3 S11: 0.0185 S12: -0.0428 S13: -0.0279 REMARK 3 S21: -0.0054 S22: -0.0199 S23: -0.0253 REMARK 3 S31: 0.0324 S32: 0.0064 S33: 0.0014 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 205 A 231 REMARK 3 ORIGIN FOR THE GROUP (A): 53.5650 -15.9440 -24.3310 REMARK 3 T TENSOR REMARK 3 T11: 0.0710 T22: 0.1118 REMARK 3 T33: 0.0598 T12: 0.0171 REMARK 3 T13: 0.0256 T23: -0.0621 REMARK 3 L TENSOR REMARK 3 L11: 5.1844 L22: 0.2894 REMARK 3 L33: 0.0424 L12: 1.2240 REMARK 3 L13: -0.4377 L23: -0.1048 REMARK 3 S TENSOR REMARK 3 S11: -0.1292 S12: 0.3162 S13: -0.3417 REMARK 3 S21: -0.0319 S22: 0.0848 S23: -0.0846 REMARK 3 S31: 0.0061 S32: -0.0487 S33: 0.0444 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 232 A 386 REMARK 3 ORIGIN FOR THE GROUP (A): 23.5110 -6.8520 -21.8930 REMARK 3 T TENSOR REMARK 3 T11: 0.0661 T22: 0.0763 REMARK 3 T33: 0.0866 T12: 0.0227 REMARK 3 T13: -0.0076 T23: 0.0264 REMARK 3 L TENSOR REMARK 3 L11: 0.0146 L22: 0.2568 REMARK 3 L33: 0.2134 L12: 0.0156 REMARK 3 L13: 0.0254 L23: 0.0848 REMARK 3 S TENSOR REMARK 3 S11: 0.0175 S12: 0.0178 S13: 0.0156 REMARK 3 S21: -0.0475 S22: -0.0052 S23: 0.0625 REMARK 3 S31: -0.0207 S32: -0.0227 S33: -0.0123 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 387 A 410 REMARK 3 ORIGIN FOR THE GROUP (A): 18.9910 -14.7060 -8.5190 REMARK 3 T TENSOR REMARK 3 T11: 0.0517 T22: 0.0653 REMARK 3 T33: 0.1473 T12: 0.0106 REMARK 3 T13: 0.0333 T23: -0.0333 REMARK 3 L TENSOR REMARK 3 L11: 0.2991 L22: 2.8751 REMARK 3 L33: 0.2086 L12: 0.9155 REMARK 3 L13: -0.1435 L23: -0.5281 REMARK 3 S TENSOR REMARK 3 S11: 0.0176 S12: -0.0240 S13: 0.1219 REMARK 3 S21: 0.0399 S22: -0.0503 S23: 0.2918 REMARK 3 S31: -0.0285 S32: -0.0422 S33: 0.0327 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 34 REMARK 3 ORIGIN FOR THE GROUP (A): 17.4600 13.6330 8.8940 REMARK 3 T TENSOR REMARK 3 T11: 0.1886 T22: 0.0135 REMARK 3 T33: 0.0788 T12: 0.0401 REMARK 3 T13: -0.0236 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 1.6966 L22: 0.4351 REMARK 3 L33: 1.5765 L12: -0.4304 REMARK 3 L13: -0.5046 L23: -0.5531 REMARK 3 S TENSOR REMARK 3 S11: -0.0849 S12: 0.0626 S13: -0.2218 REMARK 3 S21: -0.0506 S22: -0.0247 S23: 0.0403 REMARK 3 S31: 0.1555 S32: -0.0029 S33: 0.1097 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 35 B 111 REMARK 3 ORIGIN FOR THE GROUP (A): 23.8250 32.1080 18.4340 REMARK 3 T TENSOR REMARK 3 T11: 0.0584 T22: 0.1227 REMARK 3 T33: 0.0375 T12: -0.0041 REMARK 3 T13: -0.0110 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.6946 L22: 0.2927 REMARK 3 L33: 0.7408 L12: 0.1279 REMARK 3 L13: -0.3651 L23: 0.1194 REMARK 3 S TENSOR REMARK 3 S11: 0.0871 S12: -0.0845 S13: -0.0589 REMARK 3 S21: 0.0073 S22: -0.0397 S23: -0.0865 REMARK 3 S31: -0.1008 S32: 0.2134 S33: -0.0474 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 112 B 204 REMARK 3 ORIGIN FOR THE GROUP (A): 1.1910 40.3300 13.3710 REMARK 3 T TENSOR REMARK 3 T11: 0.1112 T22: 0.0494 REMARK 3 T33: 0.0594 T12: -0.0094 REMARK 3 T13: 0.0169 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 0.5492 L22: 0.0757 REMARK 3 L33: 0.1199 L12: 0.1397 REMARK 3 L13: -0.0407 L23: -0.0397 REMARK 3 S TENSOR REMARK 3 S11: 0.0339 S12: 0.0137 S13: 0.0689 REMARK 3 S21: -0.0231 S22: 0.0083 S23: 0.0443 REMARK 3 S31: -0.0543 S32: -0.0228 S33: -0.0422 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 205 B 227 REMARK 3 ORIGIN FOR THE GROUP (A): 11.6320 54.7080 24.7530 REMARK 3 T TENSOR REMARK 3 T11: 0.1296 T22: 0.0589 REMARK 3 T33: 0.0781 T12: -0.0723 REMARK 3 T13: 0.0931 T23: -0.0648 REMARK 3 L TENSOR REMARK 3 L11: 5.0641 L22: 2.2474 REMARK 3 L33: 0.3115 L12: 1.4833 REMARK 3 L13: -0.4271 L23: -0.8312 REMARK 3 S TENSOR REMARK 3 S11: 0.2280 S12: -0.3652 S13: 0.2684 REMARK 3 S21: -0.0055 S22: -0.1806 S23: 0.1547 REMARK 3 S31: 0.0161 S32: 0.0557 S33: -0.0475 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 228 B 345 REMARK 3 ORIGIN FOR THE GROUP (A): 9.3350 23.4460 21.4730 REMARK 3 T TENSOR REMARK 3 T11: 0.1054 T22: 0.0555 REMARK 3 T33: 0.0703 T12: 0.0053 REMARK 3 T13: -0.0123 T23: 0.0358 REMARK 3 L TENSOR REMARK 3 L11: 0.1212 L22: 0.0187 REMARK 3 L33: 0.4258 L12: -0.0167 REMARK 3 L13: -0.1261 L23: 0.0866 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: -0.0592 S13: 0.0008 REMARK 3 S21: 0.0261 S22: 0.0009 S23: -0.0022 REMARK 3 S31: 0.1073 S32: 0.0349 S33: 0.0052 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 346 B 399 REMARK 3 ORIGIN FOR THE GROUP (A): 0.1870 26.3110 19.3610 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: 0.0407 REMARK 3 T33: 0.0360 T12: -0.0184 REMARK 3 T13: -0.0036 T23: 0.0358 REMARK 3 L TENSOR REMARK 3 L11: 1.2578 L22: 0.0101 REMARK 3 L33: 0.6583 L12: 0.0945 REMARK 3 L13: 0.3992 L23: 0.0571 REMARK 3 S TENSOR REMARK 3 S11: 0.0670 S12: -0.1091 S13: -0.1168 REMARK 3 S21: 0.0204 S22: -0.0145 S23: -0.0129 REMARK 3 S31: 0.1096 S32: -0.0225 S33: -0.0525 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 400 B 410 REMARK 3 ORIGIN FOR THE GROUP (A): -8.5230 25.4290 9.1280 REMARK 3 T TENSOR REMARK 3 T11: 0.0999 T22: 0.0858 REMARK 3 T33: 0.2505 T12: -0.0565 REMARK 3 T13: -0.0243 T23: 0.0827 REMARK 3 L TENSOR REMARK 3 L11: 10.2489 L22: 1.0035 REMARK 3 L33: 0.5324 L12: -2.8055 REMARK 3 L13: 1.1577 L23: -0.0127 REMARK 3 S TENSOR REMARK 3 S11: 0.4706 S12: -0.0583 S13: -0.8985 REMARK 3 S21: -0.1288 S22: -0.0992 S23: 0.0476 REMARK 3 S31: 0.0303 S32: -0.1279 S33: -0.3714 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4J6B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-FEB-13. REMARK 100 THE RCSB ID CODE IS RCSB077650. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43848 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 82.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13900 REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.55900 REMARK 200 R SYM FOR SHELL (I) : 0.55900 REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB-ENTRY 1GWI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3 M MGCHO2 , PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 51.56000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.76818 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 72.61000 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 51.56000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 29.76818 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 72.61000 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 51.56000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 29.76818 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.61000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 59.53636 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 145.22000 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 59.53636 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 145.22000 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 59.53636 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 145.22000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS ONE CHAIN OF THE DIMER IN THE ASYM. UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ALA A 3 REMARK 465 ASP A 224 REMARK 465 GLY A 225 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ALA B 3 REMARK 465 ASP B 224 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 CYS A 4 CB SG REMARK 470 ARG A 34 CD NE CZ NH1 NH2 REMARK 470 GLU A 98 CD OE1 OE2 REMARK 470 ARG A 100 NH1 NH2 REMARK 470 LYS A 105 NZ REMARK 470 ARG A 112 CG CD NH2 REMARK 470 ARG A 113 NH1 NH2 REMARK 470 LYS A 119 NZ REMARK 470 LYS A 177 NZ REMARK 470 ASP A 213 CG OD1 OD2 REMARK 470 ALA A 222 CB REMARK 470 THR A 223 C O CB OG1 CG2 REMARK 470 GLU A 226 CG CD OE1 OE2 REMARK 470 ARG A 312 CZ NH1 NH2 REMARK 470 ARG A 346 CD NE CZ NH1 NH2 REMARK 470 ARG A 410 CB CG CD REMARK 470 CYS B 4 CB SG REMARK 470 ARG B 25 CD REMARK 470 ARG B 34 CD NE REMARK 470 GLU B 98 OE1 OE2 REMARK 470 ARG B 100 CD NE CZ NH1 NH2 REMARK 470 LYS B 105 NZ REMARK 470 ARG B 112 CG CD REMARK 470 ARG B 113 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 119 CE NZ REMARK 470 GLU B 167 OE1 OE2 REMARK 470 LYS B 177 NZ REMARK 470 GLU B 210 CG CD OE1 OE2 REMARK 470 ASP B 213 CG OD1 OD2 REMARK 470 ALA B 222 CB REMARK 470 THR B 223 CB OG1 CG2 REMARK 470 GLU B 226 CB CG CD OE1 OE2 REMARK 470 LEU B 305 CD1 REMARK 470 ARG B 312 CZ NH1 NH2 REMARK 470 ARG B 346 CD NE NH2 REMARK 470 ARG B 410 CA C O CB CG CD NE REMARK 470 ARG B 410 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 187 NH1 ARG B 135 3555 1.96 REMARK 500 NH1 ARG B 135 O HOH A 793 2555 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 6 CG HIS A 6 CD2 0.057 REMARK 500 HIS B 6 CG HIS B 6 CD2 0.057 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 85 -30.48 -131.99 REMARK 500 PHE A 149 -67.40 -128.41 REMARK 500 ASP A 288 51.44 -144.31 REMARK 500 ILE B 85 -34.42 -130.56 REMARK 500 PHE B 149 -64.88 -128.27 REMARK 500 GLU B 226 -148.43 -88.18 REMARK 500 ASP B 288 49.91 -144.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 827 DISTANCE = 5.76 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 8 OD1 REMARK 620 2 ASP B 8 OD2 47.0 REMARK 620 3 HIS B 6 NE2 106.7 99.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD2 REMARK 620 2 ASP A 8 OD1 60.4 REMARK 620 3 HIS A 6 NE2 136.8 83.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 502 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 357 SG REMARK 620 2 HEM A 502 NA 114.0 REMARK 620 3 HEM A 502 NB 94.4 87.3 REMARK 620 4 HEM A 502 NC 101.6 144.4 89.3 REMARK 620 5 HEM A 502 ND 102.4 84.5 163.2 88.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 357 SG REMARK 620 2 HEM B 501 NA 116.3 REMARK 620 3 HEM B 501 NB 91.1 85.7 REMARK 620 4 HEM B 501 NC 100.9 142.3 87.8 REMARK 620 5 HEM B 501 ND 108.0 85.1 160.8 89.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLO A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLO B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT B 506 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4J6B RELATED DB: PDB REMARK 900 RELATED ID: 4J6C RELATED DB: PDB REMARK 900 RELATED ID: 4JBT RELATED DB: PDB DBREF 4J6B A 1 410 UNP Q5YNS8 Q5YNS8_NOCFA 1 410 DBREF 4J6B B 1 410 UNP Q5YNS8 Q5YNS8_NOCFA 1 410 SEQRES 1 A 410 MET ASN ALA CYS PRO HIS SER ASP THR LEU THR ILE ASP SEQRES 2 A 410 PRO MET ILE THR ASP LEU ALA GLY GLU THR SER ARG LEU SEQRES 3 A 410 ARG ALA ALA GLY PRO LEU THR ARG ILE ASP LEU LEU GLY SEQRES 4 A 410 VAL PRO ALA LEU ALA VAL THR GLY HIS THR LEU ALA ARG SEQRES 5 A 410 GLN LEU LEU THR ASP THR ARG LEU VAL LYS ASP ILE ASN SEQRES 6 A 410 ALA TRP SER LEU TRP GLN SER GLY THR VAL THR ARG GLN SEQRES 7 A 410 TRP PRO LEU ILE GLY MET ILE ASP VAL ASP ARG SER MET SEQRES 8 A 410 PHE THR VAL ASP GLY PRO GLU HIS ARG ARG LEU ARG ILE SEQRES 9 A 410 LYS THR THR GLN ALA LEU THR ARG ARG ARG LEU ASP ALA SEQRES 10 A 410 LEU LYS PRO THR ILE GLU ARG TYR VAL ALA GLU LEU LEU SEQRES 11 A 410 ASP ASP LEU GLU ARG ALA GLY ALA ASP GLY ALA VAL VAL SEQRES 12 A 410 ASP LEU LYS SER VAL PHE ALA TYR PRO LEU PRO MET ARG SEQRES 13 A 410 VAL ILE SER ALA LEU MET GLY VAL PRO SER GLU ASP GLN SEQRES 14 A 410 GLU GLN LEU LEU THR TRP TYR LYS ALA PHE PHE SER ILE SEQRES 15 A 410 LEU THR PRO GLN ASP GLU ARG LEU ARG VAL ILE ASP GLU SEQRES 16 A 410 MET HIS GLY TYR PHE THR GLU MET VAL ARG ARG LYS THR SEQRES 17 A 410 ALA GLU PRO GLY ASP ASP LEU THR SER ALA LEU ILE TYR SEQRES 18 A 410 ALA THR ASP GLY GLU THR PRO LEU THR GLU GLU GLU VAL SEQRES 19 A 410 ILE GLY ASN LEU GLN ALA LEU VAL ALA ALA GLY HIS GLU SEQRES 20 A 410 THR THR VAL SER LEU ILE LEU THR ALA VAL ARG ALA LEU SEQRES 21 A 410 LEU SER HIS PRO GLU GLN LEU ARG LEU VAL ARG ASP GLY SEQRES 22 A 410 GLU ILE GLY TRP GLU THR ALA ILE GLU GLU THR LEU ARG SEQRES 23 A 410 TRP ASP GLY PRO VAL ILE HIS LEU LEU MET ARG PHE ALA SEQRES 24 A 410 THR GLU ASP ILE ASP LEU GLY ASP ALA VAL ILE PRO ARG SEQRES 25 A 410 GLY GLU GLY VAL VAL MET SER TYR ARG ALA ILE GLY ARG SEQRES 26 A 410 ASP ILE THR VAL HIS GLY ALA ASP ALA ASP ASP PHE ASP SEQRES 27 A 410 ILE THR ARG ALA THR ALA ALA ARG HIS ILE SER PHE GLY SEQRES 28 A 410 HIS GLY PRO HIS ILE CYS PRO GLY ALA ALA LEU ALA ARG SEQRES 29 A 410 LEU GLU ALA ALA ILE ALA LEU PRO ALA LEU PHE THR ARG SEQRES 30 A 410 PHE PRO HIS LEU HIS PRO ALA LEU PRO LEU ASP GLN ILE SEQRES 31 A 410 PRO ASN LEU PRO VAL LEU THR GLN ASN ASP LEU SER HIS SEQRES 32 A 410 PHE PRO ILE HIS LEU GLY ARG SEQRES 1 B 410 MET ASN ALA CYS PRO HIS SER ASP THR LEU THR ILE ASP SEQRES 2 B 410 PRO MET ILE THR ASP LEU ALA GLY GLU THR SER ARG LEU SEQRES 3 B 410 ARG ALA ALA GLY PRO LEU THR ARG ILE ASP LEU LEU GLY SEQRES 4 B 410 VAL PRO ALA LEU ALA VAL THR GLY HIS THR LEU ALA ARG SEQRES 5 B 410 GLN LEU LEU THR ASP THR ARG LEU VAL LYS ASP ILE ASN SEQRES 6 B 410 ALA TRP SER LEU TRP GLN SER GLY THR VAL THR ARG GLN SEQRES 7 B 410 TRP PRO LEU ILE GLY MET ILE ASP VAL ASP ARG SER MET SEQRES 8 B 410 PHE THR VAL ASP GLY PRO GLU HIS ARG ARG LEU ARG ILE SEQRES 9 B 410 LYS THR THR GLN ALA LEU THR ARG ARG ARG LEU ASP ALA SEQRES 10 B 410 LEU LYS PRO THR ILE GLU ARG TYR VAL ALA GLU LEU LEU SEQRES 11 B 410 ASP ASP LEU GLU ARG ALA GLY ALA ASP GLY ALA VAL VAL SEQRES 12 B 410 ASP LEU LYS SER VAL PHE ALA TYR PRO LEU PRO MET ARG SEQRES 13 B 410 VAL ILE SER ALA LEU MET GLY VAL PRO SER GLU ASP GLN SEQRES 14 B 410 GLU GLN LEU LEU THR TRP TYR LYS ALA PHE PHE SER ILE SEQRES 15 B 410 LEU THR PRO GLN ASP GLU ARG LEU ARG VAL ILE ASP GLU SEQRES 16 B 410 MET HIS GLY TYR PHE THR GLU MET VAL ARG ARG LYS THR SEQRES 17 B 410 ALA GLU PRO GLY ASP ASP LEU THR SER ALA LEU ILE TYR SEQRES 18 B 410 ALA THR ASP GLY GLU THR PRO LEU THR GLU GLU GLU VAL SEQRES 19 B 410 ILE GLY ASN LEU GLN ALA LEU VAL ALA ALA GLY HIS GLU SEQRES 20 B 410 THR THR VAL SER LEU ILE LEU THR ALA VAL ARG ALA LEU SEQRES 21 B 410 LEU SER HIS PRO GLU GLN LEU ARG LEU VAL ARG ASP GLY SEQRES 22 B 410 GLU ILE GLY TRP GLU THR ALA ILE GLU GLU THR LEU ARG SEQRES 23 B 410 TRP ASP GLY PRO VAL ILE HIS LEU LEU MET ARG PHE ALA SEQRES 24 B 410 THR GLU ASP ILE ASP LEU GLY ASP ALA VAL ILE PRO ARG SEQRES 25 B 410 GLY GLU GLY VAL VAL MET SER TYR ARG ALA ILE GLY ARG SEQRES 26 B 410 ASP ILE THR VAL HIS GLY ALA ASP ALA ASP ASP PHE ASP SEQRES 27 B 410 ILE THR ARG ALA THR ALA ALA ARG HIS ILE SER PHE GLY SEQRES 28 B 410 HIS GLY PRO HIS ILE CYS PRO GLY ALA ALA LEU ALA ARG SEQRES 29 B 410 LEU GLU ALA ALA ILE ALA LEU PRO ALA LEU PHE THR ARG SEQRES 30 B 410 PHE PRO HIS LEU HIS PRO ALA LEU PRO LEU ASP GLN ILE SEQRES 31 B 410 PRO ASN LEU PRO VAL LEU THR GLN ASN ASP LEU SER HIS SEQRES 32 B 410 PHE PRO ILE HIS LEU GLY ARG HET PLO A 501 23 HET HEM A 502 43 HET MG A 503 1 HET FMT A 504 3 HET K A 505 1 HET HEM B 501 43 HET MG B 502 1 HET PLO B 503 23 HET FMT B 504 3 HET FMT B 505 3 HET FMT B 506 3 HETNAM PLO (3BETA)-3-HYDROXYPREGN-5-EN-20-ONE HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM MG MAGNESIUM ION HETNAM FMT FORMIC ACID HETNAM K POTASSIUM ION HETSYN PLO PREGNENOLONE HETSYN HEM HEME FORMUL 3 PLO 2(C21 H32 O2) FORMUL 4 HEM 2(C34 H32 FE N4 O4) FORMUL 5 MG 2(MG 2+) FORMUL 6 FMT 4(C H2 O2) FORMUL 7 K K 1+ FORMUL 14 HOH *490(H2 O) HELIX 1 1 ASP A 18 GLY A 30 1 13 HELIX 2 2 GLY A 47 THR A 56 1 10 HELIX 3 3 ASP A 63 ALA A 66 5 4 HELIX 4 4 TRP A 67 SER A 72 1 6 HELIX 5 5 LEU A 81 ILE A 85 5 5 HELIX 6 6 GLY A 96 LEU A 110 1 15 HELIX 7 7 THR A 111 ASP A 116 1 6 HELIX 8 8 LEU A 118 GLY A 137 1 20 HELIX 9 9 ALA A 138 ALA A 141 5 4 HELIX 10 10 LEU A 145 PHE A 149 1 5 HELIX 11 11 TYR A 151 GLY A 163 1 13 HELIX 12 12 PRO A 165 GLU A 167 5 3 HELIX 13 13 ASP A 168 SER A 181 1 14 HELIX 14 14 PRO A 185 GLU A 210 1 26 HELIX 15 15 ASP A 214 TYR A 221 1 8 HELIX 16 16 THR A 230 HIS A 263 1 34 HELIX 17 17 HIS A 263 ASP A 272 1 10 HELIX 18 18 GLY A 276 GLY A 289 1 14 HELIX 19 19 SER A 319 ARG A 325 1 7 HELIX 20 20 ASP A 326 GLY A 331 1 6 HELIX 21 21 GLY A 359 PHE A 378 1 20 HELIX 22 22 PRO A 386 ILE A 390 5 5 HELIX 23 23 ASP B 18 ALA B 29 1 12 HELIX 24 24 GLY B 47 LEU B 55 1 9 HELIX 25 25 ASP B 63 ALA B 66 5 4 HELIX 26 26 TRP B 67 SER B 72 1 6 HELIX 27 27 LEU B 81 ILE B 85 5 5 HELIX 28 28 GLY B 96 LEU B 110 1 15 HELIX 29 29 THR B 111 ASP B 116 1 6 HELIX 30 30 LEU B 118 GLY B 137 1 20 HELIX 31 31 ALA B 138 ALA B 141 5 4 HELIX 32 32 LEU B 145 PHE B 149 1 5 HELIX 33 33 TYR B 151 GLY B 163 1 13 HELIX 34 34 PRO B 165 GLU B 167 5 3 HELIX 35 35 ASP B 168 SER B 181 1 14 HELIX 36 36 PRO B 185 GLU B 210 1 26 HELIX 37 37 ASP B 214 TYR B 221 1 8 HELIX 38 38 THR B 230 HIS B 263 1 34 HELIX 39 39 HIS B 263 ASP B 272 1 10 HELIX 40 40 GLY B 276 GLY B 289 1 14 HELIX 41 41 SER B 319 ARG B 325 1 7 HELIX 42 42 ASP B 326 GLY B 331 1 6 HELIX 43 43 GLY B 359 PHE B 378 1 20 HELIX 44 44 PRO B 386 ILE B 390 5 5 SHEET 1 A 6 LEU A 10 THR A 11 0 SHEET 2 A 6 LEU A 32 LEU A 37 1 O ARG A 34 N LEU A 10 SHEET 3 A 6 VAL A 40 VAL A 45 -1 O VAL A 40 N LEU A 37 SHEET 4 A 6 GLY A 315 MET A 318 1 O VAL A 317 N LEU A 43 SHEET 5 A 6 LEU A 294 ALA A 299 -1 N ARG A 297 O VAL A 316 SHEET 6 A 6 LEU A 60 VAL A 61 -1 N VAL A 61 O PHE A 298 SHEET 1 B 3 VAL A 143 ASP A 144 0 SHEET 2 B 3 PRO A 405 HIS A 407 -1 O ILE A 406 N VAL A 143 SHEET 3 B 3 HIS A 382 PRO A 383 -1 N HIS A 382 O HIS A 407 SHEET 1 C 2 ILE A 303 ASP A 304 0 SHEET 2 C 2 VAL A 309 ILE A 310 -1 O ILE A 310 N ILE A 303 SHEET 1 D 6 LEU B 10 THR B 11 0 SHEET 2 D 6 LEU B 32 LEU B 37 1 O ARG B 34 N LEU B 10 SHEET 3 D 6 VAL B 40 VAL B 45 -1 O ALA B 44 N THR B 33 SHEET 4 D 6 GLY B 315 MET B 318 1 O VAL B 317 N LEU B 43 SHEET 5 D 6 LEU B 294 ALA B 299 -1 N ARG B 297 O VAL B 316 SHEET 6 D 6 LEU B 60 VAL B 61 -1 N VAL B 61 O PHE B 298 SHEET 1 E 3 VAL B 143 ASP B 144 0 SHEET 2 E 3 PRO B 405 HIS B 407 -1 O ILE B 406 N VAL B 143 SHEET 3 E 3 HIS B 382 PRO B 383 -1 N HIS B 382 O HIS B 407 SHEET 1 F 2 ILE B 303 ASP B 304 0 SHEET 2 F 2 VAL B 309 ILE B 310 -1 O ILE B 310 N ILE B 303 LINK OD1 ASP B 8 MG MG B 502 1555 1555 1.74 LINK OD2 ASP A 8 MG MG A 503 1555 1555 1.95 LINK OD1 ASP A 8 MG MG A 503 1555 1555 2.25 LINK SG CYS A 357 FE HEM A 502 1555 1555 2.31 LINK SG CYS B 357 FE HEM B 501 1555 1555 2.32 LINK OD2 ASP B 8 MG MG B 502 1555 1555 2.91 LINK NE2 HIS A 6 MG MG A 503 1555 1555 1.66 LINK NE2 HIS B 6 MG MG B 502 1555 1555 1.69 CISPEP 1 GLY A 30 PRO A 31 0 5.39 CISPEP 2 GLU A 226 THR A 227 0 -3.25 CISPEP 3 LEU A 295 MET A 296 0 -9.07 CISPEP 4 GLY B 30 PRO B 31 0 5.44 CISPEP 5 GLY B 225 GLU B 226 0 0.65 CISPEP 6 LEU B 295 MET B 296 0 -6.37 SITE 1 AC1 11 MET A 84 PHE A 179 GLN A 239 ALA A 240 SITE 2 AC1 11 THR A 248 VAL A 291 GLN A 398 HEM A 502 SITE 3 AC1 11 HOH A 751 HOH A 779 HOH A 846 SITE 1 AC2 25 LEU A 55 MET A 91 PHE A 92 HIS A 99 SITE 2 AC2 25 ARG A 103 ILE A 158 ALA A 244 GLY A 245 SITE 3 AC2 25 THR A 248 THR A 249 PRO A 290 LEU A 294 SITE 4 AC2 25 ARG A 297 TYR A 320 SER A 349 PHE A 350 SITE 5 AC2 25 GLY A 351 HIS A 355 CYS A 357 PRO A 358 SITE 6 AC2 25 GLY A 359 ALA A 363 PLO A 501 HOH A 625 SITE 7 AC2 25 HOH A 682 SITE 1 AC3 4 HIS A 6 ASP A 8 HIS A 382 HIS A 407 SITE 1 AC4 5 LEU A 81 PHE A 180 LEU A 396 THR A 397 SITE 2 AC4 5 HOH A 782 SITE 1 AC5 1 ASP A 88 SITE 1 AC6 25 MET B 91 PHE B 92 HIS B 99 ARG B 103 SITE 2 AC6 25 ILE B 158 LEU B 241 ALA B 244 GLY B 245 SITE 3 AC6 25 THR B 248 THR B 249 PRO B 290 LEU B 294 SITE 4 AC6 25 ARG B 297 TYR B 320 SER B 349 PHE B 350 SITE 5 AC6 25 GLY B 351 HIS B 355 CYS B 357 PRO B 358 SITE 6 AC6 25 GLY B 359 ALA B 363 PLO B 503 HOH B 653 SITE 7 AC6 25 HOH B 744 SITE 1 AC7 4 HIS B 6 ASP B 8 HIS B 382 HIS B 407 SITE 1 AC8 9 GLY B 83 MET B 84 PHE B 179 GLN B 239 SITE 2 AC8 9 ALA B 240 THR B 248 GLN B 398 HEM B 501 SITE 3 AC8 9 HOH B 768 SITE 1 AC9 4 THR B 56 ASP B 57 THR B 58 ARG B 59 SITE 1 BC1 4 THR A 56 ASP A 57 THR A 58 ARG A 59 SITE 1 BC2 4 PHE B 180 LEU B 396 THR B 397 HOH B 771 CRYST1 103.120 103.120 217.830 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009697 0.005599 0.000000 0.00000 SCALE2 0.000000 0.011198 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004591 0.00000 MASTER 763 0 11 44 22 0 28 6 0 0 0 64 END