HEADER TRANSFERASE 10-FEB-13 4J5U TITLE X-RAY CRYSTAL STRUCTURE OF A SERINE HYDROXYMETHYLTRANSFERASE WITH TITLE 2 COVALENTLY BOUND PLP FROM RICKETTSIA RICKETTSII STR. SHEILA SMITH COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE HYDROXYMETHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SHMT, SERINE METHYLASE; COMPND 5 EC: 2.1.2.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RICKETTSIA RICKETTSII; SOURCE 3 ORGANISM_TAXID: 392021; SOURCE 4 STRAIN: SHEILA SMITH; SOURCE 5 GENE: GLYA, A1G_06305; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 1 13-MAR-13 4J5U 0 JRNL AUTH J.W.FAIRMAN,J.A.ABENDROTH,T.E.EDWARDS,D.LORIMER JRNL TITL X-RAY CRYSTAL STRUCTURE OF A SERINE HYDROXYMETHYLTRANSFERASE JRNL TITL 2 WITH COVALENTLY BOUND PLP FROM RICKETTSIA RICKETTSII STR. JRNL TITL 3 SHEILA SMITH JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1255) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 81155 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4057 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.6250 - 5.1916 0.96 2633 139 0.1422 0.1560 REMARK 3 2 5.1916 - 4.1334 0.99 2694 127 0.1252 0.1614 REMARK 3 3 4.1334 - 3.6146 0.98 2682 141 0.1414 0.1556 REMARK 3 4 3.6146 - 3.2858 1.00 2692 134 0.1452 0.1563 REMARK 3 5 3.2858 - 3.0512 1.00 2675 162 0.1598 0.1898 REMARK 3 6 3.0512 - 2.8719 1.00 2673 137 0.1641 0.2020 REMARK 3 7 2.8719 - 2.7284 1.00 2689 153 0.1641 0.2079 REMARK 3 8 2.7284 - 2.6100 1.00 2711 136 0.1674 0.2215 REMARK 3 9 2.6100 - 2.5097 1.00 2649 150 0.1690 0.1876 REMARK 3 10 2.5097 - 2.4233 1.00 2667 152 0.1610 0.1945 REMARK 3 11 2.4233 - 2.3476 1.00 2635 157 0.1652 0.2063 REMARK 3 12 2.3476 - 2.2806 0.99 2695 139 0.1779 0.2161 REMARK 3 13 2.2806 - 2.2207 0.96 2579 113 0.3277 0.3985 REMARK 3 14 2.2207 - 2.1665 0.99 2681 131 0.1805 0.1926 REMARK 3 15 2.1665 - 2.1173 1.00 2673 134 0.1688 0.2221 REMARK 3 16 2.1173 - 2.0723 1.00 2659 143 0.1544 0.2250 REMARK 3 17 2.0723 - 2.0309 1.00 2699 164 0.1641 0.2161 REMARK 3 18 2.0309 - 1.9926 1.00 2657 132 0.1609 0.1835 REMARK 3 19 1.9926 - 1.9571 1.00 2662 144 0.1876 0.2448 REMARK 3 20 1.9571 - 1.9239 0.95 2560 152 0.2535 0.3230 REMARK 3 21 1.9239 - 1.8929 0.96 2562 128 0.3951 0.5473 REMARK 3 22 1.8929 - 1.8638 0.98 2684 133 0.2319 0.2961 REMARK 3 23 1.8638 - 1.8364 1.00 2662 130 0.1866 0.2213 REMARK 3 24 1.8364 - 1.8106 1.00 2677 138 0.1740 0.2434 REMARK 3 25 1.8106 - 1.7861 1.00 2691 154 0.1720 0.2377 REMARK 3 26 1.7861 - 1.7630 1.00 2685 136 0.1754 0.2548 REMARK 3 27 1.7630 - 1.7409 1.00 2633 148 0.1760 0.2402 REMARK 3 28 1.7409 - 1.7200 0.99 2706 120 0.1731 0.1918 REMARK 3 29 1.7200 - 1.7000 0.96 2533 130 0.1878 0.2383 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 6701 REMARK 3 ANGLE : 1.145 9134 REMARK 3 CHIRALITY : 0.076 1030 REMARK 3 PLANARITY : 0.006 1202 REMARK 3 DIHEDRAL : 14.033 2458 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:420 ) OR (CHAIN B AND RESID 1: REMARK 3 420 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1982 13.8831 15.3186 REMARK 3 T TENSOR REMARK 3 T11: 0.0678 T22: 0.0942 REMARK 3 T33: 0.0990 T12: 0.0012 REMARK 3 T13: -0.0042 T23: 0.0330 REMARK 3 L TENSOR REMARK 3 L11: 0.3688 L22: 0.6530 REMARK 3 L33: 0.4671 L12: 0.0993 REMARK 3 L13: -0.0308 L23: -0.0199 REMARK 3 S TENSOR REMARK 3 S11: -0.0069 S12: 0.0082 S13: -0.0082 REMARK 3 S21: 0.0033 S22: 0.0357 S23: 0.0507 REMARK 3 S31: 0.0089 S32: -0.0255 S33: -0.0228 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4J5U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-FEB-13. REMARK 100 THE RCSB ID CODE IS RCSB077633. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JAN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.28357 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81184 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.03500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.3700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.20000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.420 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3ECD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE, 0.1 M MES: REMARK 280 NAOH PH 6.5, 10% (W/V) PEG 4000, 22.4 MG/ML PROTEIN, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 56.64000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AS PER THE AUTHORS THE BIOLOGICAL ASSEMBLY IS UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 LYS A 13 CG CD CE NZ REMARK 470 LYS A 62 CG CD CE NZ REMARK 470 LYS A 89 CG CD CE NZ REMARK 470 LYS A 149 CG CD CE NZ REMARK 470 LYS A 167 CG CD CE NZ REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 GLU A 189 CG CD OE1 OE2 REMARK 470 GLU A 245 CG CD OE1 OE2 REMARK 470 LYS A 324 CG CD CE NZ REMARK 470 LEU A 331 CG CD1 CD2 REMARK 470 GLU A 396 CG CD OE1 OE2 REMARK 470 GLU A 414 CG CD OE1 OE2 REMARK 470 LYS B 13 CG CD CE NZ REMARK 470 LYS B 62 CG CD CE NZ REMARK 470 LYS B 138 CG CD CE NZ REMARK 470 LYS B 149 CG CD CE NZ REMARK 470 GLU B 396 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 878 O HOH A 880 2.11 REMARK 500 O HOH A 878 O HOH A 879 2.16 REMARK 500 O GLY A 305 O HOH A 878 2.18 REMARK 500 O HOH A 886 O HOH B 573 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN A 87 O HOH B 551 2555 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 50 4.58 -68.93 REMARK 500 ALA A 56 43.62 -142.93 REMARK 500 LLP A 230 -130.83 82.15 REMARK 500 ASN A 315 -145.31 -131.30 REMARK 500 PHE A 350 -2.03 75.28 REMARK 500 THR A 358 165.84 66.16 REMARK 500 LEU B 50 3.38 -68.86 REMARK 500 LYS B 62 48.86 -141.26 REMARK 500 LLP B 230 -137.72 79.44 REMARK 500 THR B 310 -0.81 69.21 REMARK 500 ASN B 315 -149.38 -130.72 REMARK 500 PHE B 350 -3.26 76.31 REMARK 500 THR B 358 167.67 64.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 791 DISTANCE = 5.18 ANGSTROMS REMARK 525 HOH A 792 DISTANCE = 5.18 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: RIRIA.00008.A RELATED DB: TARGETTRACK DBREF 4J5U A 1 420 UNP A8GTI9 GLYA_RICRS 1 420 DBREF 4J5U B 1 420 UNP A8GTI9 GLYA_RICRS 1 420 SEQRES 1 A 420 MET ASN ILE PHE ASN ASN ASN LEU HIS GLU THR ASP LYS SEQRES 2 A 420 GLU ILE ASN GLU ILE ILE LYS HIS GLU LYS LEU ARG GLN SEQRES 3 A 420 SER SER VAL ILE GLU LEU ILE ALA SER GLU ASN PHE VAL SEQRES 4 A 420 SER PRO ALA VAL LEU GLU ALA GLN GLY ALA LEU LEU THR SEQRES 5 A 420 ASN LYS TYR ALA GLU GLY TYR PRO SER LYS ARG PHE TYR SEQRES 6 A 420 ASN GLY CYS GLU GLU VAL ASP LYS ALA GLU ASN LEU ALA SEQRES 7 A 420 ILE GLU ARG VAL LYS LYS LEU PHE ASN CYS LYS TYR ALA SEQRES 8 A 420 ASN VAL GLN PRO HIS SER GLY SER GLN ALA ASN GLN ALA SEQRES 9 A 420 VAL TYR LEU ALA LEU LEU GLN PRO GLY ASP THR VAL LEU SEQRES 10 A 420 GLY MET SER LEU ASP SER GLY GLY HIS LEU THR HIS GLY SEQRES 11 A 420 ALA ALA PRO ASN MET SER GLY LYS TRP PHE ASN ALA VAL SEQRES 12 A 420 SER TYR SER VAL ASN LYS GLU THR TYR LEU ILE ASP TYR SEQRES 13 A 420 ASP GLU ILE GLU ARG LEU ALA ASP LEU HIS LYS PRO LYS SEQRES 14 A 420 LEU LEU ILE ALA GLY PHE SER ALA TYR PRO ARG ASN ILE SEQRES 15 A 420 ASP PHE ALA LYS PHE ARG GLU ILE VAL ASP LYS VAL GLY SEQRES 16 A 420 ALA TYR PHE MET ALA ASP ILE ALA HIS ILE ALA GLY LEU SEQRES 17 A 420 VAL ALA THR GLY GLU HIS GLN SER PRO ILE PRO TYR ALA SEQRES 18 A 420 HIS ALA VAL THR SER THR THR HIS LLP THR LEU ARG GLY SEQRES 19 A 420 PRO ARG GLY GLY LEU ILE LEU SER ASN ASP GLU GLU ILE SEQRES 20 A 420 GLY HIS LYS ILE ASN SER ALA LEU PHE PRO GLY LEU GLN SEQRES 21 A 420 GLY GLY PRO LEU MET HIS ILE ILE ALA ALA LYS ALA VAL SEQRES 22 A 420 ALA PHE LEU GLU ASN LEU GLN PRO GLU TYR LYS SER TYR SEQRES 23 A 420 ILE GLN GLN VAL ILE SER ASN ALA LYS ALA LEU ALA SER SEQRES 24 A 420 SER LEU GLN GLU ARG GLY TYR ASP ILE LEU THR GLY GLY SEQRES 25 A 420 THR ASP ASN HIS ILE VAL LEU VAL ASP LEU ARG LYS ASP SEQRES 26 A 420 GLY ILE THR GLY LYS LEU ALA ALA ASN SER LEU ASP ARG SEQRES 27 A 420 ALA GLY ILE THR CYS ASN LYS ASN ALA ILE PRO PHE ASP SEQRES 28 A 420 GLU THR SER PRO PHE ILE THR SER GLY ILE ARG LEU GLY SEQRES 29 A 420 THR PRO ALA CYS THR THR ARG GLY PHE LYS GLU LYS ASP SEQRES 30 A 420 PHE VAL LEU VAL GLY HIS MET VAL ALA ASP ILE LEU ASP SEQRES 31 A 420 GLY LEU LYS ASN ASN GLU ASP ASN SER ALA LEU GLU GLN SEQRES 32 A 420 GLN VAL LEU ASN GLU VAL THR LYS LEU ILE GLU LEU PHE SEQRES 33 A 420 PRO PHE TYR GLY SEQRES 1 B 420 MET ASN ILE PHE ASN ASN ASN LEU HIS GLU THR ASP LYS SEQRES 2 B 420 GLU ILE ASN GLU ILE ILE LYS HIS GLU LYS LEU ARG GLN SEQRES 3 B 420 SER SER VAL ILE GLU LEU ILE ALA SER GLU ASN PHE VAL SEQRES 4 B 420 SER PRO ALA VAL LEU GLU ALA GLN GLY ALA LEU LEU THR SEQRES 5 B 420 ASN LYS TYR ALA GLU GLY TYR PRO SER LYS ARG PHE TYR SEQRES 6 B 420 ASN GLY CYS GLU GLU VAL ASP LYS ALA GLU ASN LEU ALA SEQRES 7 B 420 ILE GLU ARG VAL LYS LYS LEU PHE ASN CYS LYS TYR ALA SEQRES 8 B 420 ASN VAL GLN PRO HIS SER GLY SER GLN ALA ASN GLN ALA SEQRES 9 B 420 VAL TYR LEU ALA LEU LEU GLN PRO GLY ASP THR VAL LEU SEQRES 10 B 420 GLY MET SER LEU ASP SER GLY GLY HIS LEU THR HIS GLY SEQRES 11 B 420 ALA ALA PRO ASN MET SER GLY LYS TRP PHE ASN ALA VAL SEQRES 12 B 420 SER TYR SER VAL ASN LYS GLU THR TYR LEU ILE ASP TYR SEQRES 13 B 420 ASP GLU ILE GLU ARG LEU ALA ASP LEU HIS LYS PRO LYS SEQRES 14 B 420 LEU LEU ILE ALA GLY PHE SER ALA TYR PRO ARG ASN ILE SEQRES 15 B 420 ASP PHE ALA LYS PHE ARG GLU ILE VAL ASP LYS VAL GLY SEQRES 16 B 420 ALA TYR PHE MET ALA ASP ILE ALA HIS ILE ALA GLY LEU SEQRES 17 B 420 VAL ALA THR GLY GLU HIS GLN SER PRO ILE PRO TYR ALA SEQRES 18 B 420 HIS ALA VAL THR SER THR THR HIS LLP THR LEU ARG GLY SEQRES 19 B 420 PRO ARG GLY GLY LEU ILE LEU SER ASN ASP GLU GLU ILE SEQRES 20 B 420 GLY HIS LYS ILE ASN SER ALA LEU PHE PRO GLY LEU GLN SEQRES 21 B 420 GLY GLY PRO LEU MET HIS ILE ILE ALA ALA LYS ALA VAL SEQRES 22 B 420 ALA PHE LEU GLU ASN LEU GLN PRO GLU TYR LYS SER TYR SEQRES 23 B 420 ILE GLN GLN VAL ILE SER ASN ALA LYS ALA LEU ALA SER SEQRES 24 B 420 SER LEU GLN GLU ARG GLY TYR ASP ILE LEU THR GLY GLY SEQRES 25 B 420 THR ASP ASN HIS ILE VAL LEU VAL ASP LEU ARG LYS ASP SEQRES 26 B 420 GLY ILE THR GLY LYS LEU ALA ALA ASN SER LEU ASP ARG SEQRES 27 B 420 ALA GLY ILE THR CYS ASN LYS ASN ALA ILE PRO PHE ASP SEQRES 28 B 420 GLU THR SER PRO PHE ILE THR SER GLY ILE ARG LEU GLY SEQRES 29 B 420 THR PRO ALA CYS THR THR ARG GLY PHE LYS GLU LYS ASP SEQRES 30 B 420 PHE VAL LEU VAL GLY HIS MET VAL ALA ASP ILE LEU ASP SEQRES 31 B 420 GLY LEU LYS ASN ASN GLU ASP ASN SER ALA LEU GLU GLN SEQRES 32 B 420 GLN VAL LEU ASN GLU VAL THR LYS LEU ILE GLU LEU PHE SEQRES 33 B 420 PRO PHE TYR GLY MODRES 4J5U LLP A 230 LYS MODRES 4J5U LLP B 230 LYS HET LLP A 230 24 HET LLP B 230 24 HETNAM LLP 2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL- HETNAM 2 LLP PYRIDIN-4-YLMETHANE) HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE FORMUL 1 LLP 2(C14 H24 N3 O7 P) FORMUL 3 HOH *771(H2 O) HELIX 1 1 ASN A 2 ASN A 6 5 5 HELIX 2 2 ASN A 7 ASP A 12 1 6 HELIX 3 3 ASP A 12 VAL A 29 1 18 HELIX 4 4 SER A 40 GLY A 48 1 9 HELIX 5 5 ALA A 49 LYS A 54 5 6 HELIX 6 6 CYS A 68 ASN A 87 1 20 HELIX 7 7 SER A 97 LEU A 110 1 14 HELIX 8 8 LEU A 121 GLY A 124 5 4 HELIX 9 9 HIS A 126 GLY A 130 5 5 HELIX 10 10 ASN A 134 TRP A 139 1 6 HELIX 11 11 ASP A 155 LYS A 167 1 13 HELIX 12 12 ASP A 183 GLY A 195 1 13 HELIX 13 13 ILE A 205 THR A 211 1 7 HELIX 14 14 HIS A 229 ARG A 233 5 5 HELIX 15 15 ASP A 244 PHE A 256 1 13 HELIX 16 16 LEU A 264 LEU A 279 1 16 HELIX 17 17 GLN A 280 ARG A 304 1 25 HELIX 18 18 THR A 310 GLY A 312 5 3 HELIX 19 19 ARG A 323 GLY A 326 5 4 HELIX 20 20 THR A 328 ALA A 339 1 12 HELIX 21 21 THR A 365 ARG A 371 1 7 HELIX 22 22 LYS A 374 ASN A 395 1 22 HELIX 23 23 ASN A 398 GLU A 414 1 17 HELIX 24 24 ASN B 2 ASN B 6 5 5 HELIX 25 25 ASN B 7 ASP B 12 1 6 HELIX 26 26 ASP B 12 VAL B 29 1 18 HELIX 27 27 SER B 40 GLY B 48 1 9 HELIX 28 28 ALA B 49 LYS B 54 5 6 HELIX 29 29 CYS B 68 ASN B 87 1 20 HELIX 30 30 SER B 97 LEU B 110 1 14 HELIX 31 31 HIS B 126 GLY B 130 5 5 HELIX 32 32 ASN B 134 TRP B 139 1 6 HELIX 33 33 ASP B 155 LYS B 167 1 13 HELIX 34 34 ASP B 183 VAL B 194 1 12 HELIX 35 35 ILE B 205 THR B 211 1 7 HELIX 36 36 HIS B 229 ARG B 233 5 5 HELIX 37 37 ASP B 244 PHE B 256 1 13 HELIX 38 38 LEU B 264 GLN B 280 1 17 HELIX 39 39 GLN B 280 ARG B 304 1 25 HELIX 40 40 THR B 310 GLY B 312 5 3 HELIX 41 41 ARG B 323 GLY B 326 5 4 HELIX 42 42 THR B 328 ALA B 339 1 12 HELIX 43 43 THR B 365 ARG B 371 1 7 HELIX 44 44 LYS B 374 ASN B 395 1 22 HELIX 45 45 ASN B 398 GLU B 414 1 17 SHEET 1 A 2 ILE A 30 GLU A 31 0 SHEET 2 A 2 ILE A 341 THR A 342 1 O THR A 342 N ILE A 30 SHEET 1 B 2 GLY A 58 TYR A 59 0 SHEET 2 B 2 LYS A 62 ARG A 63 -1 O LYS A 62 N TYR A 59 SHEET 1 C 7 TYR A 90 ASN A 92 0 SHEET 2 C 7 GLY A 238 SER A 242 -1 O ILE A 240 N ASN A 92 SHEET 3 C 7 ALA A 223 THR A 227 -1 N VAL A 224 O LEU A 241 SHEET 4 C 7 TYR A 197 ASP A 201 1 N ALA A 200 O THR A 225 SHEET 5 C 7 LEU A 170 GLY A 174 1 N ALA A 173 O ASP A 201 SHEET 6 C 7 THR A 115 MET A 119 1 N LEU A 117 O ILE A 172 SHEET 7 C 7 ASN A 141 TYR A 145 1 O VAL A 143 N VAL A 116 SHEET 1 D 4 ASP A 307 ILE A 308 0 SHEET 2 D 4 ILE A 317 ASP A 321 -1 O ASP A 321 N ASP A 307 SHEET 3 D 4 GLY A 360 GLY A 364 -1 O LEU A 363 N VAL A 318 SHEET 4 D 4 ASN A 344 LYS A 345 -1 N ASN A 344 O ARG A 362 SHEET 1 E 2 ILE B 30 GLU B 31 0 SHEET 2 E 2 ILE B 341 THR B 342 1 O THR B 342 N ILE B 30 SHEET 1 F 2 GLY B 58 TYR B 59 0 SHEET 2 F 2 LYS B 62 ARG B 63 -1 O LYS B 62 N TYR B 59 SHEET 1 G 7 TYR B 90 ASN B 92 0 SHEET 2 G 7 GLY B 238 SER B 242 -1 O ILE B 240 N ASN B 92 SHEET 3 G 7 ALA B 223 THR B 227 -1 N VAL B 224 O LEU B 241 SHEET 4 G 7 TYR B 197 ASP B 201 1 N ALA B 200 O THR B 225 SHEET 5 G 7 LEU B 170 GLY B 174 1 N ALA B 173 O ASP B 201 SHEET 6 G 7 THR B 115 MET B 119 1 N LEU B 117 O ILE B 172 SHEET 7 G 7 ASN B 141 TYR B 145 1 O VAL B 143 N VAL B 116 SHEET 1 H 4 ASP B 307 ILE B 308 0 SHEET 2 H 4 ILE B 317 ASP B 321 -1 O ASP B 321 N ASP B 307 SHEET 3 H 4 GLY B 360 GLY B 364 -1 O LEU B 363 N VAL B 318 SHEET 4 H 4 ASN B 344 LYS B 345 -1 N ASN B 344 O ARG B 362 LINK C HIS A 229 N LLP A 230 1555 1555 1.33 LINK C LLP A 230 N THR A 231 1555 1555 1.33 LINK C HIS B 229 N LLP B 230 1555 1555 1.33 LINK C LLP B 230 N THR B 231 1555 1555 1.33 CISPEP 1 PHE A 256 PRO A 257 0 10.65 CISPEP 2 PHE B 256 PRO B 257 0 8.53 CRYST1 56.270 113.280 65.910 90.00 114.91 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017771 0.000000 0.008251 0.00000 SCALE2 0.000000 0.008828 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016728 0.00000 MASTER 333 0 2 45 30 0 0 6 0 0 0 66 END