HEADER SUGAR BINDING PROTEIN 30-NOV-12 4I6S TITLE STRUCTURE OF RSL MUTANT W76A IN COMPLEX WITH L-FUCOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE FUCOSE-BINDING LECTIN PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RALSTONIA SOLANACEARUM; SOURCE 3 ORGANISM_TAXID: 305; SOURCE 4 STRAIN: ATCC 11696; SOURCE 5 GENE: CMR15_11270, RSC2107; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: TUNER; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET25 KEYWDS LECTIN, BETA-PROPELLER, L-FUCOSE, MULTIVALENCY, TRIVALENT FUCOSE KEYWDS 2 BINDING LECTIN, FUCOSYLATED OLIGOSACCHARIDES BINDING, SOLUBLE, SUGAR KEYWDS 3 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.AUDFRAY,J.ARNAUD,A.VARROT,A.IMBERTY REVDAT 4 29-JUL-20 4I6S 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 SITE REVDAT 3 09-OCT-13 4I6S 1 JRNL REVDAT 2 25-SEP-13 4I6S 1 JRNL REVDAT 1 31-JUL-13 4I6S 0 JRNL AUTH J.ARNAUD,J.CLAUDINON,K.TRONDLE,M.TROVASLET,G.LARSON, JRNL AUTH 2 A.THOMAS,A.VARROT,W.ROMER,A.IMBERTY,A.AUDFRAY JRNL TITL REDUCTION OF LECTIN VALENCY DRASTICALLY CHANGES GLYCOLIPID JRNL TITL 2 DYNAMICS IN MEMBRANES BUT NOT SURFACE AVIDITY JRNL REF ACS CHEM.BIOL. V. 8 1918 2013 JRNL REFN ISSN 1554-8929 JRNL PMID 23855446 JRNL DOI 10.1021/CB400254B REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 38902 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.149 REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.172 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2061 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.54 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.58 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2793 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.1930 REMARK 3 BIN FREE R VALUE SET COUNT : 140 REMARK 3 BIN FREE R VALUE : 0.2160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2007 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 120 REMARK 3 SOLVENT ATOMS : 285 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.29000 REMARK 3 B22 (A**2) : 0.29000 REMARK 3 B33 (A**2) : -0.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.067 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.067 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.104 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.969 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2209 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1918 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3034 ; 1.733 ; 1.933 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4395 ; 0.799 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 269 ; 7.124 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 83 ;35.217 ;23.494 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 279 ;13.220 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ; 5.951 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 363 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2438 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 521 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 89 REMARK 3 ORIGIN FOR THE GROUP (A): -24.0655 2.2789 16.4799 REMARK 3 T TENSOR REMARK 3 T11: 0.0499 T22: 0.0790 REMARK 3 T33: 0.1076 T12: 0.0365 REMARK 3 T13: -0.0217 T23: -0.0747 REMARK 3 L TENSOR REMARK 3 L11: 1.7889 L22: 0.6227 REMARK 3 L33: 0.6501 L12: -0.3342 REMARK 3 L13: 0.4902 L23: 0.2190 REMARK 3 S TENSOR REMARK 3 S11: -0.1762 S12: -0.2656 S13: 0.3431 REMARK 3 S21: 0.0423 S22: 0.1471 S23: -0.1126 REMARK 3 S31: -0.0609 S32: 0.0480 S33: 0.0292 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 89 REMARK 3 ORIGIN FOR THE GROUP (A): -27.9047 -9.9566 2.5206 REMARK 3 T TENSOR REMARK 3 T11: 0.0324 T22: 0.0403 REMARK 3 T33: 0.0215 T12: 0.0106 REMARK 3 T13: 0.0132 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 1.3895 L22: 0.7088 REMARK 3 L33: 1.1399 L12: -0.0300 REMARK 3 L13: 0.5567 L23: 0.5799 REMARK 3 S TENSOR REMARK 3 S11: 0.0033 S12: 0.0685 S13: 0.0177 REMARK 3 S21: -0.0352 S22: -0.0033 S23: 0.0236 REMARK 3 S31: -0.0011 S32: 0.0263 S33: -0.0001 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 89 REMARK 3 ORIGIN FOR THE GROUP (A): -43.6471 0.0442 7.5904 REMARK 3 T TENSOR REMARK 3 T11: 0.0548 T22: 0.0581 REMARK 3 T33: 0.0951 T12: 0.0492 REMARK 3 T13: -0.0133 T23: -0.0354 REMARK 3 L TENSOR REMARK 3 L11: 2.2326 L22: 0.2021 REMARK 3 L33: 0.0222 L12: -0.6672 REMARK 3 L13: 0.1636 L23: -0.0518 REMARK 3 S TENSOR REMARK 3 S11: -0.0695 S12: -0.0603 S13: 0.0801 REMARK 3 S21: 0.0328 S22: 0.0360 S23: -0.0188 REMARK 3 S31: -0.0253 S32: -0.0281 S33: 0.0335 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4I6S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000076375. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9817 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : KIRKPATRICK-BAEZ PAIR OF BI REMARK 200 -MORPH MIRRORS PLUS CHANNEL CUT REMARK 200 CRYOGENICALLY COOLED REMARK 200 MONOCHROMATOR CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41015 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 51.880 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : 0.04200 REMARK 200 FOR THE DATA SET : 24.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 0.34700 REMARK 200 R SYM FOR SHELL (I) : 0.34700 REMARK 200 FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2BT9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS/BICINE, 0.12M REMARK 280 MONOSACCHARIDES, 30% P550MME/P20K, PH 8.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 292.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 51.88250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 51.88250 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.41700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 51.88250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.20850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 51.88250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 75.62550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 51.88250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 75.62550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.88250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.20850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 51.88250 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 51.88250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 50.41700 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 51.88250 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 51.88250 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 50.41700 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 51.88250 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 75.62550 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 51.88250 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 25.20850 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 51.88250 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 25.20850 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 51.88250 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 75.62550 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 51.88250 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 51.88250 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 50.41700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C3 PG4 B 105 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 241 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 273 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 281 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 250 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 284 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 285 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 465 ASN A 90 REMARK 465 MET B 0 REMARK 465 MET C 0 REMARK 465 SER C 1 REMARK 465 ASN C 90 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP C 10 CG TRP C 10 CD1 0.090 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG C 17 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 HETEROGEN FUC(102 CHAIN A) AND FUL(103 CHAIN A) ARE IN ALTERNATE REMARK 600 CONFORMATIONS OF EACH OTHER. FUC(102 CHAIN B) AND FUL(103 CHAIN B) REMARK 600 ARE IN ALTERNATE CONFORMATIONS OF EACH OTHER. FUC(101 CHAIN C) AND REMARK 600 FUL(102 CHAIN C) ARE IN ALTERNATE CONFORMATIONS OF EACH OTHER. REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 B 105 REMARK 610 PG4 C 103 REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2BT9 RELATED DB: PDB REMARK 900 RALSTONIA SOLANACEARUM FUCOSE BINDING LECTIN DBREF 4I6S A 0 90 UNP D8NA05 D8NA05_RALSL 1 91 DBREF 4I6S B 0 90 UNP D8NA05 D8NA05_RALSL 1 91 DBREF 4I6S C 0 90 UNP D8NA05 D8NA05_RALSL 1 91 SEQADV 4I6S ALA A 76 UNP D8NA05 TRP 77 ENGINEERED MUTATION SEQADV 4I6S ALA B 76 UNP D8NA05 TRP 77 ENGINEERED MUTATION SEQADV 4I6S ALA C 76 UNP D8NA05 TRP 77 ENGINEERED MUTATION SEQRES 1 A 91 MET SER SER VAL GLN THR ALA ALA THR SER TRP GLY THR SEQRES 2 A 91 VAL PRO SER ILE ARG VAL TYR THR ALA ASN ASN GLY LYS SEQRES 3 A 91 ILE THR GLU ARG CYS TRP ASP GLY LYS GLY TRP TYR THR SEQRES 4 A 91 GLY ALA PHE ASN GLU PRO GLY ASP ASN VAL SER VAL THR SEQRES 5 A 91 SER TRP LEU VAL GLY SER ALA ILE HIS ILE ARG VAL TYR SEQRES 6 A 91 ALA SER THR GLY THR THR THR THR GLU TRP CYS ALA ASP SEQRES 7 A 91 GLY ASN GLY TRP THR LYS GLY ALA TYR THR ALA THR ASN SEQRES 1 B 91 MET SER SER VAL GLN THR ALA ALA THR SER TRP GLY THR SEQRES 2 B 91 VAL PRO SER ILE ARG VAL TYR THR ALA ASN ASN GLY LYS SEQRES 3 B 91 ILE THR GLU ARG CYS TRP ASP GLY LYS GLY TRP TYR THR SEQRES 4 B 91 GLY ALA PHE ASN GLU PRO GLY ASP ASN VAL SER VAL THR SEQRES 5 B 91 SER TRP LEU VAL GLY SER ALA ILE HIS ILE ARG VAL TYR SEQRES 6 B 91 ALA SER THR GLY THR THR THR THR GLU TRP CYS ALA ASP SEQRES 7 B 91 GLY ASN GLY TRP THR LYS GLY ALA TYR THR ALA THR ASN SEQRES 1 C 91 MET SER SER VAL GLN THR ALA ALA THR SER TRP GLY THR SEQRES 2 C 91 VAL PRO SER ILE ARG VAL TYR THR ALA ASN ASN GLY LYS SEQRES 3 C 91 ILE THR GLU ARG CYS TRP ASP GLY LYS GLY TRP TYR THR SEQRES 4 C 91 GLY ALA PHE ASN GLU PRO GLY ASP ASN VAL SER VAL THR SEQRES 5 C 91 SER TRP LEU VAL GLY SER ALA ILE HIS ILE ARG VAL TYR SEQRES 6 C 91 ALA SER THR GLY THR THR THR THR GLU TRP CYS ALA ASP SEQRES 7 C 91 GLY ASN GLY TRP THR LYS GLY ALA TYR THR ALA THR ASN HET FUC A 101 11 HET FUC A 102 11 HET FUL A 103 11 HET FUC B 101 11 HET FUC B 102 11 HET FUL B 103 11 HET EDO B 104 4 HET PG4 B 105 10 HET FUC C 101 11 HET FUL C 102 11 HET PG4 C 103 7 HET FUL C 104 11 HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM FUL BETA-L-FUCOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN FUL 6-DEOXY-BETA-L-GALACTOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 4 FUC 5(C6 H12 O5) FORMUL 6 FUL 4(C6 H12 O5) FORMUL 10 EDO C2 H6 O2 FORMUL 11 PG4 2(C8 H18 O5) FORMUL 16 HOH *285(H2 O) SHEET 1 A 4 GLN A 4 TRP A 10 0 SHEET 2 A 4 SER A 15 ASN A 22 -1 O ALA A 21 N GLN A 4 SHEET 3 A 4 LYS A 25 TRP A 31 -1 O ARG A 29 N VAL A 18 SHEET 4 A 4 TRP A 36 PRO A 44 -1 O TYR A 37 N CYS A 30 SHEET 1 B 4 ASN A 47 VAL A 55 0 SHEET 2 B 4 ALA A 58 THR A 67 -1 O ARG A 62 N THR A 51 SHEET 3 B 4 THR A 70 ALA A 76 -1 O TRP A 74 N VAL A 63 SHEET 4 B 4 TRP A 81 LYS A 83 -1 O THR A 82 N CYS A 75 SHEET 1 C 4 GLN B 4 TRP B 10 0 SHEET 2 C 4 SER B 15 ASN B 22 -1 O ALA B 21 N GLN B 4 SHEET 3 C 4 LYS B 25 TRP B 31 -1 O ARG B 29 N VAL B 18 SHEET 4 C 4 TRP B 36 PRO B 44 -1 O TYR B 37 N CYS B 30 SHEET 1 D 4 ASN B 47 VAL B 55 0 SHEET 2 D 4 ALA B 58 THR B 67 -1 O ARG B 62 N THR B 51 SHEET 3 D 4 THR B 70 ALA B 76 -1 O TRP B 74 N VAL B 63 SHEET 4 D 4 TRP B 81 LYS B 83 -1 O THR B 82 N CYS B 75 SHEET 1 E 4 GLN C 4 TRP C 10 0 SHEET 2 E 4 SER C 15 ASN C 22 -1 O ALA C 21 N GLN C 4 SHEET 3 E 4 LYS C 25 TRP C 31 -1 O LYS C 25 N ASN C 22 SHEET 4 E 4 TRP C 36 PRO C 44 -1 O TYR C 37 N CYS C 30 SHEET 1 F 3 ASN C 47 VAL C 55 0 SHEET 2 F 3 ALA C 58 THR C 67 -1 O TYR C 64 N SER C 49 SHEET 3 F 3 THR C 70 GLY C 78 -1 O THR C 72 N ALA C 65 SHEET 4 F 3 TRP C 81 LYS C 83 -1 O THR C 82 N CYS C 75 CISPEP 1 VAL A 13 PRO A 14 0 -6.28 CISPEP 2 VAL B 13 PRO B 14 0 -6.54 CISPEP 3 VAL C 13 PRO C 14 0 -7.34 CRYST1 103.765 103.765 100.834 90.00 90.00 90.00 I 41 2 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009637 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009637 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009917 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.277246 -0.222116 -0.934772 -31.60168 1 MTRIX2 2 0.949111 0.087979 -0.302404 30.54858 1 MTRIX3 2 0.149409 -0.971043 0.186421 10.18765 1 MASTER 433 0 12 0 24 0 0 12 0 0 0 21 END