HEADER TRANSCRIPTION 09-NOV-12 4HX4 TITLE STRUCTURE OF MNTR MUTANT E11K COMPLEXED WITH MN2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR MNTR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MANGANESE TRANSPORT REGULATOR; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: BACILLUS SUBTILIS, BSU24520, MNTR, YQHN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)AI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHB7506 KEYWDS WINGED HELIX-TURN-HELIX, TRANSCRIPTION REGULATOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR A.GLASFELD,A.MCGUIRE REVDAT 2 06-FEB-13 4HX4 1 JRNL REVDAT 1 21-NOV-12 4HX4 0 JRNL AUTH A.M.MCGUIRE,B.J.CUTHBERT,Z.MA,K.D.GRAUER-GRAY, JRNL AUTH 2 M.BRUNJES BROPHY,K.A.SPEAR,S.SOONSANGA,J.I.KLIEGMAN, JRNL AUTH 3 S.L.GRINER,J.D.HELMANN,A.GLASFELD JRNL TITL ROLES OF THE A AND C SITES IN THE MANGANESE-SPECIFIC JRNL TITL 2 ACTIVATION OF MNTR. JRNL REF BIOCHEMISTRY V. 52 701 2013 JRNL REFN ISSN 0006-2960 JRNL PMID 23298157 JRNL DOI 10.1021/BI301550T REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 38181 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2021 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2641 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.3850 REMARK 3 BIN FREE R VALUE SET COUNT : 145 REMARK 3 BIN FREE R VALUE : 0.3550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2098 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 112 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.38000 REMARK 3 B22 (A**2) : -3.14000 REMARK 3 B33 (A**2) : -2.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.67000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.110 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.109 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.113 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.109 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2194 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2184 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2947 ; 1.120 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5053 ; 0.720 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 266 ; 4.720 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 109 ;26.776 ;24.679 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 456 ;13.590 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ; 9.786 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 325 ; 0.063 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2408 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 467 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1536 ; 0.299 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 119 ; 0.122 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 30 ; 0.151 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.238 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1346 ; 0.733 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2099 ; 1.044 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 963 ; 1.924 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 843 ; 2.956 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 17 REMARK 3 ORIGIN FOR THE GROUP (A): 18.0636 25.0808 2.5288 REMARK 3 T TENSOR REMARK 3 T11: 0.1470 T22: 0.2190 REMARK 3 T33: 0.1622 T12: -0.0371 REMARK 3 T13: 0.0753 T23: -0.0196 REMARK 3 L TENSOR REMARK 3 L11: 4.4071 L22: 2.6281 REMARK 3 L33: 9.0222 L12: 0.3138 REMARK 3 L13: -0.4445 L23: 0.8925 REMARK 3 S TENSOR REMARK 3 S11: 0.0750 S12: -0.3796 S13: 0.1958 REMARK 3 S21: 0.5997 S22: -0.0535 S23: 0.2828 REMARK 3 S31: 0.0198 S32: -0.3034 S33: -0.0215 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 18 A 29 REMARK 3 ORIGIN FOR THE GROUP (A): 16.2533 18.0322 -6.1036 REMARK 3 T TENSOR REMARK 3 T11: 0.0826 T22: 0.2019 REMARK 3 T33: 0.1709 T12: -0.0006 REMARK 3 T13: 0.0563 T23: -0.0218 REMARK 3 L TENSOR REMARK 3 L11: 9.5427 L22: 6.6420 REMARK 3 L33: 7.3737 L12: 3.9304 REMARK 3 L13: -0.9151 L23: 1.6556 REMARK 3 S TENSOR REMARK 3 S11: -0.1228 S12: 0.0062 S13: -0.2489 REMARK 3 S21: -0.1055 S22: 0.0276 S23: 0.0781 REMARK 3 S31: 0.5037 S32: -0.0843 S33: 0.0952 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 30 A 51 REMARK 3 ORIGIN FOR THE GROUP (A): 8.7605 25.8654 1.2337 REMARK 3 T TENSOR REMARK 3 T11: 0.1648 T22: 0.4092 REMARK 3 T33: 0.2831 T12: -0.0092 REMARK 3 T13: 0.1276 T23: -0.0217 REMARK 3 L TENSOR REMARK 3 L11: 3.3874 L22: 6.3393 REMARK 3 L33: 4.0700 L12: 0.7773 REMARK 3 L13: 0.8443 L23: -2.3013 REMARK 3 S TENSOR REMARK 3 S11: 0.1183 S12: -0.1639 S13: 0.0375 REMARK 3 S21: 0.3645 S22: -0.0366 S23: 0.7047 REMARK 3 S31: -0.0832 S32: -0.5491 S33: -0.0818 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 52 A 76 REMARK 3 ORIGIN FOR THE GROUP (A): 21.7886 30.7698 -1.8354 REMARK 3 T TENSOR REMARK 3 T11: 0.0511 T22: 0.1633 REMARK 3 T33: 0.1273 T12: -0.0081 REMARK 3 T13: 0.0556 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 6.8949 L22: 4.3684 REMARK 3 L33: 8.3935 L12: -3.2938 REMARK 3 L13: 5.3175 L23: -2.9534 REMARK 3 S TENSOR REMARK 3 S11: -0.0345 S12: 0.1421 S13: 0.2752 REMARK 3 S21: -0.1049 S22: -0.0240 S23: 0.0958 REMARK 3 S31: -0.0876 S32: -0.1000 S33: 0.0585 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 77 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): 31.8647 23.7944 13.4849 REMARK 3 T TENSOR REMARK 3 T11: 0.0304 T22: 0.1476 REMARK 3 T33: 0.0605 T12: 0.0079 REMARK 3 T13: 0.0179 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 2.6314 L22: 2.9084 REMARK 3 L33: 2.5089 L12: 0.4789 REMARK 3 L13: 0.6450 L23: 0.6170 REMARK 3 S TENSOR REMARK 3 S11: 0.0911 S12: 0.1446 S13: -0.1155 REMARK 3 S21: -0.0867 S22: -0.0247 S23: 0.0070 REMARK 3 S31: 0.1621 S32: 0.0277 S33: -0.0664 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 120 A 130 REMARK 3 ORIGIN FOR THE GROUP (A): 48.2217 21.5033 15.6695 REMARK 3 T TENSOR REMARK 3 T11: 0.2015 T22: 0.2775 REMARK 3 T33: 0.3364 T12: 0.0135 REMARK 3 T13: 0.2231 T23: -0.0478 REMARK 3 L TENSOR REMARK 3 L11: 8.5322 L22: 2.1406 REMARK 3 L33: 16.4683 L12: -2.4081 REMARK 3 L13: 1.5688 L23: -5.3045 REMARK 3 S TENSOR REMARK 3 S11: 0.1758 S12: 0.4256 S13: -0.3047 REMARK 3 S21: -0.3071 S22: -0.2384 S23: 0.0454 REMARK 3 S31: 0.8783 S32: 0.4889 S33: 0.0626 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 131 A 135 REMARK 3 ORIGIN FOR THE GROUP (A): 44.8591 14.4705 24.7366 REMARK 3 T TENSOR REMARK 3 T11: 0.1910 T22: 0.3513 REMARK 3 T33: 0.3229 T12: 0.0753 REMARK 3 T13: 0.0567 T23: 0.0382 REMARK 3 L TENSOR REMARK 3 L11: 14.2096 L22: 14.2286 REMARK 3 L33: 17.8963 L12: -3.8032 REMARK 3 L13: -6.0660 L23: -3.9043 REMARK 3 S TENSOR REMARK 3 S11: -0.0602 S12: -0.4087 S13: -0.9017 REMARK 3 S21: 0.6344 S22: 0.1415 S23: 0.4381 REMARK 3 S31: 0.5894 S32: -0.4288 S33: -0.0812 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 17 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5745 25.6953 34.1261 REMARK 3 T TENSOR REMARK 3 T11: 0.1891 T22: 0.1406 REMARK 3 T33: 0.1534 T12: -0.0099 REMARK 3 T13: -0.0269 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 4.6618 L22: 2.1654 REMARK 3 L33: 7.8376 L12: -0.4692 REMARK 3 L13: 0.7524 L23: 1.0083 REMARK 3 S TENSOR REMARK 3 S11: 0.1388 S12: 0.2167 S13: -0.2021 REMARK 3 S21: -0.5323 S22: 0.0591 S23: 0.1949 REMARK 3 S31: 0.3151 S32: -0.0482 S33: -0.1978 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 18 B 41 REMARK 3 ORIGIN FOR THE GROUP (A): 10.2993 32.2593 37.7667 REMARK 3 T TENSOR REMARK 3 T11: 0.0637 T22: 0.2239 REMARK 3 T33: 0.1907 T12: 0.0094 REMARK 3 T13: 0.0312 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 6.5436 L22: 0.9945 REMARK 3 L33: 8.9166 L12: -0.6865 REMARK 3 L13: 5.6167 L23: -0.3222 REMARK 3 S TENSOR REMARK 3 S11: 0.0956 S12: -0.2675 S13: 0.0602 REMARK 3 S21: -0.2080 S22: 0.0463 S23: 0.1159 REMARK 3 S31: -0.1003 S32: -0.4119 S33: -0.1419 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 42 B 60 REMARK 3 ORIGIN FOR THE GROUP (A): 8.6354 18.8066 37.9196 REMARK 3 T TENSOR REMARK 3 T11: 0.1626 T22: 0.2355 REMARK 3 T33: 0.2560 T12: -0.0505 REMARK 3 T13: -0.0252 T23: 0.0630 REMARK 3 L TENSOR REMARK 3 L11: 7.6759 L22: 3.9495 REMARK 3 L33: 7.6080 L12: 0.3447 REMARK 3 L13: 1.0180 L23: -0.2257 REMARK 3 S TENSOR REMARK 3 S11: -0.0949 S12: 0.1878 S13: -0.0220 REMARK 3 S21: -0.5759 S22: 0.1107 S23: 0.6505 REMARK 3 S31: 0.1314 S32: -0.4235 S33: -0.0158 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 61 B 75 REMARK 3 ORIGIN FOR THE GROUP (A): 21.6967 19.4259 38.3450 REMARK 3 T TENSOR REMARK 3 T11: 0.0466 T22: 0.1691 REMARK 3 T33: 0.1108 T12: 0.0239 REMARK 3 T13: 0.0349 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 7.4050 L22: 3.9378 REMARK 3 L33: 5.4830 L12: 4.5424 REMARK 3 L13: -6.0691 L23: -4.2070 REMARK 3 S TENSOR REMARK 3 S11: -0.1890 S12: -0.1748 S13: -0.2766 REMARK 3 S21: -0.2150 S22: 0.0359 S23: -0.0977 REMARK 3 S31: 0.2521 S32: 0.1576 S33: 0.1531 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 76 B 115 REMARK 3 ORIGIN FOR THE GROUP (A): 29.8924 27.4072 25.2246 REMARK 3 T TENSOR REMARK 3 T11: 0.0232 T22: 0.1251 REMARK 3 T33: 0.0426 T12: -0.0068 REMARK 3 T13: 0.0235 T23: -0.0103 REMARK 3 L TENSOR REMARK 3 L11: 2.9889 L22: 3.3214 REMARK 3 L33: 2.4038 L12: -0.3312 REMARK 3 L13: -0.1313 L23: 0.2240 REMARK 3 S TENSOR REMARK 3 S11: 0.0385 S12: -0.0979 S13: 0.0048 REMARK 3 S21: 0.2074 S22: -0.0439 S23: 0.0623 REMARK 3 S31: 0.0101 S32: -0.0801 S33: 0.0054 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 116 B 130 REMARK 3 ORIGIN FOR THE GROUP (A): 45.8451 28.2534 25.3102 REMARK 3 T TENSOR REMARK 3 T11: 0.2257 T22: 0.2403 REMARK 3 T33: 0.2023 T12: -0.0427 REMARK 3 T13: -0.0929 T23: 0.0445 REMARK 3 L TENSOR REMARK 3 L11: 7.7652 L22: 2.4819 REMARK 3 L33: 1.2345 L12: 1.6995 REMARK 3 L13: 0.2479 L23: -0.0515 REMARK 3 S TENSOR REMARK 3 S11: 0.2708 S12: -0.4062 S13: -0.2188 REMARK 3 S21: 0.6670 S22: -0.2434 S23: -0.5404 REMARK 3 S31: -0.0137 S32: 0.2836 S33: -0.0274 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 131 B 135 REMARK 3 ORIGIN FOR THE GROUP (A): 45.7800 36.8881 15.1655 REMARK 3 T TENSOR REMARK 3 T11: 0.2554 T22: 0.3500 REMARK 3 T33: 0.2883 T12: -0.0815 REMARK 3 T13: -0.0148 T23: 0.0407 REMARK 3 L TENSOR REMARK 3 L11: 20.3726 L22: 17.2939 REMARK 3 L33: 13.9209 L12: -7.0868 REMARK 3 L13: -4.9812 L23: -3.2098 REMARK 3 S TENSOR REMARK 3 S11: -0.3784 S12: 0.5978 S13: 0.5449 REMARK 3 S21: -0.2691 S22: 0.1822 S23: -0.0035 REMARK 3 S31: -0.5221 S32: 0.1154 S33: 0.1962 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4HX4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-NOV-12. REMARK 100 THE RCSB ID CODE IS RCSB076029. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1159 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40214 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 74.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.560 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2F5D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% ETHYLENE GLYCOL, 55 MM LITHIUM REMARK 280 SULFATE, 2 MM MANGANESE CHLORIDE, PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 23.04050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 2 REMARK 465 TYR A 54 REMARK 465 GLU A 55 REMARK 465 LYS A 56 REMARK 465 TYR A 57 REMARK 465 ARG A 58 REMARK 465 LYS A 136 REMARK 465 THR A 137 REMARK 465 GLU A 138 REMARK 465 HIS A 139 REMARK 465 HIS A 140 REMARK 465 ASN A 141 REMARK 465 GLN A 142 REMARK 465 THR B 2 REMARK 465 TYR B 54 REMARK 465 GLU B 55 REMARK 465 LYS B 56 REMARK 465 TYR B 57 REMARK 465 ARG B 58 REMARK 465 LYS B 136 REMARK 465 THR B 137 REMARK 465 GLU B 138 REMARK 465 HIS B 139 REMARK 465 HIS B 140 REMARK 465 ASN B 141 REMARK 465 GLN B 142 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 309 O REMARK 620 2 GLU A 99 OE1 92.8 REMARK 620 3 GLU A 102 OE2 174.8 90.7 REMARK 620 4 GLU A 99 O 79.8 101.5 95.7 REMARK 620 5 HIS A 103 NE2 87.5 170.3 89.8 88.1 REMARK 620 6 ASP A 8 OD2 88.1 89.9 95.8 163.7 80.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 102 OE2 REMARK 620 2 HOH B 338 O 174.7 REMARK 620 3 GLU B 99 OE1 86.0 91.4 REMARK 620 4 ASP B 8 OD2 102.0 82.5 89.8 REMARK 620 5 GLU B 99 O 89.2 86.8 99.6 166.0 REMARK 620 6 HIS B 103 NE2 95.1 88.4 168.2 78.5 92.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2F5D RELATED DB: PDB REMARK 900 RELATED ID: 4HV6 RELATED DB: PDB REMARK 900 RELATED ID: 4HX7 RELATED DB: PDB REMARK 900 RELATED ID: 4HX8 RELATED DB: PDB DBREF 4HX4 A 2 142 UNP P54512 MNTR_BACSU 2 142 DBREF 4HX4 B 2 142 UNP P54512 MNTR_BACSU 2 142 SEQADV 4HX4 LYS A 11 UNP P54512 GLU 11 ENGINEERED MUTATION SEQADV 4HX4 LYS B 11 UNP P54512 GLU 11 ENGINEERED MUTATION SEQRES 1 A 141 THR THR PRO SER MET GLU ASP TYR ILE LYS GLN ILE TYR SEQRES 2 A 141 MET LEU ILE GLU GLU LYS GLY TYR ALA ARG VAL SER ASP SEQRES 3 A 141 ILE ALA GLU ALA LEU ALA VAL HIS PRO SER SER VAL THR SEQRES 4 A 141 LYS MET VAL GLN LYS LEU ASP LYS ASP GLU TYR LEU ILE SEQRES 5 A 141 TYR GLU LYS TYR ARG GLY LEU VAL LEU THR SER LYS GLY SEQRES 6 A 141 LYS LYS ILE GLY LYS ARG LEU VAL TYR ARG HIS GLU LEU SEQRES 7 A 141 LEU GLU GLN PHE LEU ARG ILE ILE GLY VAL ASP GLU GLU SEQRES 8 A 141 LYS ILE TYR ASN ASP VAL GLU GLY ILE GLU HIS HIS LEU SEQRES 9 A 141 SER TRP ASN SER ILE ASP ARG ILE GLY ASP LEU VAL GLN SEQRES 10 A 141 TYR PHE GLU GLU ASP ASP ALA ARG LYS LYS ASP LEU LYS SEQRES 11 A 141 SER ILE GLN LYS LYS THR GLU HIS HIS ASN GLN SEQRES 1 B 141 THR THR PRO SER MET GLU ASP TYR ILE LYS GLN ILE TYR SEQRES 2 B 141 MET LEU ILE GLU GLU LYS GLY TYR ALA ARG VAL SER ASP SEQRES 3 B 141 ILE ALA GLU ALA LEU ALA VAL HIS PRO SER SER VAL THR SEQRES 4 B 141 LYS MET VAL GLN LYS LEU ASP LYS ASP GLU TYR LEU ILE SEQRES 5 B 141 TYR GLU LYS TYR ARG GLY LEU VAL LEU THR SER LYS GLY SEQRES 6 B 141 LYS LYS ILE GLY LYS ARG LEU VAL TYR ARG HIS GLU LEU SEQRES 7 B 141 LEU GLU GLN PHE LEU ARG ILE ILE GLY VAL ASP GLU GLU SEQRES 8 B 141 LYS ILE TYR ASN ASP VAL GLU GLY ILE GLU HIS HIS LEU SEQRES 9 B 141 SER TRP ASN SER ILE ASP ARG ILE GLY ASP LEU VAL GLN SEQRES 10 B 141 TYR PHE GLU GLU ASP ASP ALA ARG LYS LYS ASP LEU LYS SEQRES 11 B 141 SER ILE GLN LYS LYS THR GLU HIS HIS ASN GLN HET MN A 201 1 HET MN B 201 1 HETNAM MN MANGANESE (II) ION FORMUL 3 MN 2(MN 2+) FORMUL 5 HOH *112(H2 O) HELIX 1 1 THR A 3 GLY A 21 1 19 HELIX 2 2 ARG A 24 ALA A 33 1 10 HELIX 3 3 HIS A 35 ASP A 49 1 15 HELIX 4 4 THR A 63 ILE A 87 1 25 HELIX 5 5 ASP A 90 GLU A 92 5 3 HELIX 6 6 LYS A 93 GLU A 102 1 10 HELIX 7 7 HIS A 103 LEU A 105 5 3 HELIX 8 8 SER A 106 GLU A 122 1 17 HELIX 9 9 ASP A 123 LYS A 135 1 13 HELIX 10 10 PRO B 4 GLY B 21 1 18 HELIX 11 11 ARG B 24 ALA B 33 1 10 HELIX 12 12 HIS B 35 ASP B 49 1 15 HELIX 13 13 THR B 63 ILE B 87 1 25 HELIX 14 14 ASP B 90 GLU B 102 1 13 HELIX 15 15 HIS B 103 LEU B 105 5 3 HELIX 16 16 SER B 106 GLU B 122 1 17 HELIX 17 17 ASP B 123 LYS B 135 1 13 LINK MN MN A 201 O HOH A 309 1555 1555 2.10 LINK OE2 GLU B 102 MN MN B 201 1555 1555 2.16 LINK OE1 GLU A 99 MN MN A 201 1555 1555 2.20 LINK OE2 GLU A 102 MN MN A 201 1555 1555 2.24 LINK MN MN B 201 O HOH B 338 1555 1555 2.28 LINK OE1 GLU B 99 MN MN B 201 1555 1555 2.30 LINK OD2 ASP B 8 MN MN B 201 1555 1555 2.36 LINK O GLU A 99 MN MN A 201 1555 1555 2.39 LINK O GLU B 99 MN MN B 201 1555 1555 2.39 LINK NE2 HIS B 103 MN MN B 201 1555 1555 2.42 LINK NE2 HIS A 103 MN MN A 201 1555 1555 2.44 LINK OD2 ASP A 8 MN MN A 201 1555 1555 2.45 SITE 1 AC1 5 ASP A 8 GLU A 99 GLU A 102 HIS A 103 SITE 2 AC1 5 HOH A 309 SITE 1 AC2 5 ASP B 8 GLU B 99 GLU B 102 HIS B 103 SITE 2 AC2 5 HOH B 338 CRYST1 49.427 46.081 74.892 90.00 92.96 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020232 0.000000 0.001046 0.00000 SCALE2 0.000000 0.021701 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013370 0.00000 MASTER 552 0 2 17 0 0 4 6 0 0 0 22 END