HEADER HYDROLASE/HYDROLASE INHIBITOR 08-AUG-89 4HVP TITLE STRUCTURE OF COMPLEX OF SYNTHETIC HIV-1 PROTEASE WITH A SUBSTRATE- TITLE 2 BASED INHIBITOR AT 2.3 ANGSTROMS RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HIV-1 PROTEASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11676; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ACID PROTEINASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.MILLER,J.SCHNEIDER,B.K.SATHYANARAYANA,M.V.TOTH,G.R.MARSHALL, AUTHOR 2 L.CLAWSON,L.SELK,S.B.H.KENT,A.WLODAWER REVDAT 9 29-NOV-17 4HVP 1 HELIX REVDAT 8 03-APR-13 4HVP 1 TITLE REVDAT 7 13-JUL-11 4HVP 1 VERSN REVDAT 6 24-FEB-09 4HVP 1 VERSN REVDAT 5 01-APR-03 4HVP 1 JRNL REVDAT 4 15-OCT-92 4HVP 1 ATOM HETATM REVDAT 3 15-JUL-91 4HVP 1 SEQRES REVDAT 2 15-OCT-90 4HVP 1 SEQRES HET FORMUL HETATM REVDAT 2 2 1 TER REVDAT 1 15-APR-90 4HVP 0 JRNL AUTH M.MILLER,J.SCHNEIDER,B.K.SATHYANARAYANA,M.V.TOTH, JRNL AUTH 2 G.R.MARSHALL,L.CLAWSON,L.SELK,S.B.KENT,A.WLODAWER JRNL TITL STRUCTURE OF COMPLEX OF SYNTHETIC HIV-1 PROTEASE WITH A JRNL TITL 2 SUBSTRATE-BASED INHIBITOR AT 2.3 A RESOLUTION. JRNL REF SCIENCE V. 246 1149 1989 JRNL REFN ISSN 0036-8075 JRNL PMID 2686029 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.WLODAWER,M.MILLER,M.JASKOLSKI,B.K.SATHYANARAYANA, REMARK 1 AUTH 2 E.BALDWIN,I.T.WEBER,L.M.SELK,L.CLAWSON,J.SCHNEIDER, REMARK 1 AUTH 3 S.B.H.KENT REMARK 1 TITL CONSERVED FOLDING IN RETROVIRAL PROTEASES. CRYSTAL STRUCTURE REMARK 1 TITL 2 OF A SYNTHETIC HIV-1 PROTEASE REMARK 1 REF SCIENCE V. 245 616 1989 REMARK 1 REFN ISSN 0036-8075 REMARK 1 REFERENCE 2 REMARK 1 AUTH I.T.WEBER,M.MILLER,M.JASKOLSKI,J.LEIS,A.M.SKALKA,A.WLODAWER REMARK 1 TITL MOLECULAR MODELING OF THE HIV-1 PROTEASE AND ITS SUBSTRATE REMARK 1 TITL 2 BINDING SITE REMARK 1 REF SCIENCE V. 243 928 1989 REMARK 1 REFN ISSN 0036-8075 REMARK 1 REFERENCE 3 REMARK 1 AUTH M.MILLER,M.JASKOLSKI,J.K.M.RAO,J.LEIS,A.WLODAWER REMARK 1 TITL CRYSTAL STRUCTURE OF A RETROVIRAL PROTEASE PROVES REMARK 1 TITL 2 RELATIONSHIP TO ASPARTIC PROTEASE FAMILY REMARK 1 REF NATURE V. 337 576 1989 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 4 REMARK 1 AUTH J.SCHNEIDER,S.B.H.KENT REMARK 1 TITL ENZYMATIC ACTIVITY OF A SYNTHETIC 99 RESIDUE PROTEIN REMARK 1 TITL 2 CORRESPONDING TO THE PUTATIVE HIV-1 PROTEASE REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 54 363 1988 REMARK 1 REFN ISSN 0092-8674 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 7813 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1516 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 70 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.019 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.067 ; 0.040 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.068 ; 0.050 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.014 ; 0.020 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : 0.220 ; 0.150 REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.271 ; 0.300 REMARK 3 MULTIPLE TORSION (A) : 0.297 ; 0.300 REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : 0.204 ; 0.300 REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 2.600 ; 3.000 REMARK 3 STAGGERED (DEGREES) : 21.600; 10.000 REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.002 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.590 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.111 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.164 ; 4.000 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HVP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000179344. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.85000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.22500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.60000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 31.22500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.85000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.60000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 7 CA - CB - CG ANGL. DEV. = 14.9 DEGREES REMARK 500 GLN A 7 CB - CG - CD ANGL. DEV. = 26.0 DEGREES REMARK 500 ARG A 8 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG A 8 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 VAL A 11 N - CA - CB ANGL. DEV. = -16.6 DEGREES REMARK 500 VAL A 11 CG1 - CB - CG2 ANGL. DEV. = 10.8 DEGREES REMARK 500 ARG A 14 N - CA - CB ANGL. DEV. = 13.8 DEGREES REMARK 500 ILE A 15 N - CA - CB ANGL. DEV. = 14.0 DEGREES REMARK 500 GLY A 17 N - CA - C ANGL. DEV. = -21.7 DEGREES REMARK 500 GLY A 17 CA - C - O ANGL. DEV. = -12.0 DEGREES REMARK 500 GLN A 18 CA - C - O ANGL. DEV. = 12.9 DEGREES REMARK 500 GLN A 18 O - C - N ANGL. DEV. = -11.3 DEGREES REMARK 500 ALA A 22 N - CA - CB ANGL. DEV. = 9.9 DEGREES REMARK 500 LEU A 23 CA - CB - CG ANGL. DEV. = 25.8 DEGREES REMARK 500 THR A 26 N - CA - CB ANGL. DEV. = -17.6 DEGREES REMARK 500 THR A 26 CA - CB - CG2 ANGL. DEV. = 12.8 DEGREES REMARK 500 ASP A 29 OD1 - CG - OD2 ANGL. DEV. = 11.9 DEGREES REMARK 500 ASP A 29 CB - CG - OD2 ANGL. DEV. = -10.4 DEGREES REMARK 500 ASP A 30 CB - CG - OD1 ANGL. DEV. = 12.2 DEGREES REMARK 500 ASP A 30 CB - CG - OD2 ANGL. DEV. = -12.2 DEGREES REMARK 500 GLU A 34 CB - CG - CD ANGL. DEV. = 39.9 DEGREES REMARK 500 GLU A 35 CB - CA - C ANGL. DEV. = 12.7 DEGREES REMARK 500 LYS A 41 CB - CA - C ANGL. DEV. = 15.9 DEGREES REMARK 500 LYS A 41 CA - CB - CG ANGL. DEV. = 15.9 DEGREES REMARK 500 ARG A 57 CB - CG - CD ANGL. DEV. = -19.4 DEGREES REMARK 500 ARG A 57 NH1 - CZ - NH2 ANGL. DEV. = 9.5 DEGREES REMARK 500 ARG A 57 NE - CZ - NH1 ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG A 57 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 57 O - C - N ANGL. DEV. = 12.5 DEGREES REMARK 500 GLY A 68 CA - C - O ANGL. DEV. = -11.6 DEGREES REMARK 500 HIS A 69 N - CA - CB ANGL. DEV. = 11.0 DEGREES REMARK 500 HIS A 69 CA - CB - CG ANGL. DEV. = -10.6 DEGREES REMARK 500 VAL A 82 CG1 - CB - CG2 ANGL. DEV. = -10.8 DEGREES REMARK 500 VAL A 82 CA - CB - CG2 ANGL. DEV. = 13.6 DEGREES REMARK 500 GLY A 86 O - C - N ANGL. DEV. = 14.7 DEGREES REMARK 500 ARG A 87 CD - NE - CZ ANGL. DEV. = 10.0 DEGREES REMARK 500 ARG A 87 NH1 - CZ - NH2 ANGL. DEV. = -10.7 DEGREES REMARK 500 ARG A 87 NE - CZ - NH1 ANGL. DEV. = 9.2 DEGREES REMARK 500 THR A 91 CA - CB - CG2 ANGL. DEV. = 10.0 DEGREES REMARK 500 PHE A 99 N - CA - CB ANGL. DEV. = 12.5 DEGREES REMARK 500 GLN B 7 CB - CG - CD ANGL. DEV. = 19.8 DEGREES REMARK 500 GLN B 7 CG - CD - OE1 ANGL. DEV. = 15.6 DEGREES REMARK 500 VAL B 11 N - CA - CB ANGL. DEV. = -18.7 DEGREES REMARK 500 VAL B 11 CA - CB - CG1 ANGL. DEV. = 9.0 DEGREES REMARK 500 THR B 12 N - CA - CB ANGL. DEV. = 14.6 DEGREES REMARK 500 ARG B 14 CD - NE - CZ ANGL. DEV. = 29.0 DEGREES REMARK 500 ARG B 14 NE - CZ - NH2 ANGL. DEV. = 7.3 DEGREES REMARK 500 ILE B 15 CB - CA - C ANGL. DEV. = -14.5 DEGREES REMARK 500 ILE B 15 N - CA - CB ANGL. DEV. = 13.9 DEGREES REMARK 500 GLY B 17 CA - C - O ANGL. DEV. = 14.4 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 75 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 35 124.28 -26.06 REMARK 500 VAL B 64 -167.07 -124.12 REMARK 500 GLU B 65 107.11 -168.02 REMARK 500 ABA B 67 62.72 39.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE PEPTIDE BOND BETWEEN SUBCOMPONENTS THE 2 NLE RESIDUES HAS BEEN REMARK 600 REDUCED (IT IS -CH2-NH-) REMARK 630 REMARK 630 MOLECULE TYPE: PEPTIDE-LIKE INHIBITOR REMARK 630 MOLECULE NAME: N-{(2S)-2-[(N-ACETYL-L-THREONYL-L-ISOLEUCYL)AMINO] REMARK 630 HEXYL}-L-NORLEUCYL-L-GLUTAMINYL-N~5~-[AMINO(IMINIO)METHYL]-L- REMARK 630 ORNITHINAMIDE REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 2NC B 0 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: ACE THR ILE 2A0 GLN ARG NH2 REMARK 630 DETAILS: NULL REMARK 700 REMARK 700 THE DIMER INTERFACE IS COMPOSED OF INTERDIGITATED N- AND REMARK 700 C-TERMINI FROM BOTH SUBUNITS FORMING A FOUR-STRANDED REMARK 700 ANTIPARALLEL BETA-SHEET. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2NC B 0 DBREF 4HVP A 1 99 UNP P03369 POL_HV1A2 57 155 DBREF 4HVP B 1 99 UNP P03369 POL_HV1A2 57 155 SEQADV 4HVP ABA A 67 UNP P03369 CYS 123 CONFLICT SEQADV 4HVP ABA A 95 UNP P03369 CYS 151 CONFLICT SEQADV 4HVP ABA B 67 UNP P03369 CYS 123 CONFLICT SEQADV 4HVP ABA B 95 UNP P03369 CYS 151 CONFLICT SEQRES 1 A 99 PRO GLN ILE THR LEU TRP GLN ARG PRO LEU VAL THR ILE SEQRES 2 A 99 ARG ILE GLY GLY GLN LEU LYS GLU ALA LEU LEU ASP THR SEQRES 3 A 99 GLY ALA ASP ASP THR VAL LEU GLU GLU MET ASN LEU PRO SEQRES 4 A 99 GLY LYS TRP LYS PRO LYS MET ILE GLY GLY ILE GLY GLY SEQRES 5 A 99 PHE ILE LYS VAL ARG GLN TYR ASP GLN ILE PRO VAL GLU SEQRES 6 A 99 ILE ABA GLY HIS LYS ALA ILE GLY THR VAL LEU VAL GLY SEQRES 7 A 99 PRO THR PRO VAL ASN ILE ILE GLY ARG ASN LEU LEU THR SEQRES 8 A 99 GLN ILE GLY ABA THR LEU ASN PHE SEQRES 1 B 99 PRO GLN ILE THR LEU TRP GLN ARG PRO LEU VAL THR ILE SEQRES 2 B 99 ARG ILE GLY GLY GLN LEU LYS GLU ALA LEU LEU ASP THR SEQRES 3 B 99 GLY ALA ASP ASP THR VAL LEU GLU GLU MET ASN LEU PRO SEQRES 4 B 99 GLY LYS TRP LYS PRO LYS MET ILE GLY GLY ILE GLY GLY SEQRES 5 B 99 PHE ILE LYS VAL ARG GLN TYR ASP GLN ILE PRO VAL GLU SEQRES 6 B 99 ILE ABA GLY HIS LYS ALA ILE GLY THR VAL LEU VAL GLY SEQRES 7 B 99 PRO THR PRO VAL ASN ILE ILE GLY ARG ASN LEU LEU THR SEQRES 8 B 99 GLN ILE GLY ABA THR LEU ASN PHE MODRES 4HVP ABA A 67 ALA ALPHA-AMINOBUTYRIC ACID MODRES 4HVP ABA A 95 ALA ALPHA-AMINOBUTYRIC ACID MODRES 4HVP ABA B 67 ALA ALPHA-AMINOBUTYRIC ACID MODRES 4HVP ABA B 95 ALA ALPHA-AMINOBUTYRIC ACID HET ABA A 67 6 HET ABA A 95 6 HET ABA B 67 6 HET ABA B 95 6 HET 2NC B 0 54 HETNAM ABA ALPHA-AMINOBUTYRIC ACID HETNAM 2NC N-{(2S)-2-[(N-ACETYL-L-THREONYL-L-ISOLEUCYL) HETNAM 2 2NC AMINO]HEXYL}-L-NORLEUCYL-L-GLUTAMINYL-N~5~- HETNAM 3 2NC [AMINO(IMINIO)METHYL]-L-ORNITHINAMIDE HETSYN 2NC P2/NC FORMUL 1 ABA 4(C4 H9 N O2) FORMUL 3 2NC C35 H68 N11 O8 1+ FORMUL 4 HOH *70(H2 O) HELIX 1 HA GLY A 86 GLY A 94 1 9 HELIX 2 HB GLY B 86 GLY B 94 1 9 SHEET 1 COA 8 LYS A 43 GLY A 49 0 SHEET 2 COA 8 GLY A 52 ILE A 66 -1 SHEET 3 COA 8 HIS A 69 GLY A 78 -1 SHEET 4 COA 8 THR A 31 GLU A 34 1 SHEET 5 COA 8 ASN A 83 ILE A 85 -1 SHEET 6 COA 8 GLN A 18 ASP A 25 1 SHEET 7 COA 8 PRO A 9 ILE A 15 -1 SHEET 8 COA 8 GLU A 65 ILE A 66 -1 SHEET 1 COB 8 LYS B 43 GLY B 49 0 SHEET 2 COB 8 GLY B 52 ILE B 66 -1 SHEET 3 COB 8 HIS B 69 GLY B 78 -1 SHEET 4 COB 8 THR B 31 GLU B 34 1 SHEET 5 COB 8 ASN B 83 ILE B 85 -1 SHEET 6 COB 8 GLN B 18 ASP B 25 1 SHEET 7 COB 8 PRO B 9 ILE B 15 -1 SHEET 8 COB 8 GLU B 65 ILE B 66 -1 SHEET 1 INT 4 PRO A 1 THR A 4 0 SHEET 2 INT 4 THR B 96 PHE B 99 -1 SHEET 3 INT 4 THR A 96 PHE A 99 -1 SHEET 4 INT 4 PRO B 1 THR B 4 -1 LINK C ILE A 66 N ABA A 67 1555 1555 1.32 LINK C ABA A 67 N GLY A 68 1555 1555 1.32 LINK C GLY A 94 N ABA A 95 1555 1555 1.30 LINK C ABA A 95 N THR A 96 1555 1555 1.34 LINK C ILE B 66 N ABA B 67 1555 1555 1.33 LINK C ABA B 67 N GLY B 68 1555 1555 1.31 LINK C GLY B 94 N ABA B 95 1555 1555 1.30 LINK C ABA B 95 N THR B 96 1555 1555 1.32 SITE 1 AC1 25 ARG A 8 ASP A 25 GLY A 27 ALA A 28 SITE 2 AC1 25 ASP A 29 ASP A 30 ILE A 47 GLY A 48 SITE 3 AC1 25 GLY A 49 ILE A 50 VAL A 82 HOH A 431 SITE 4 AC1 25 HOH A 628 ARG B 8 ASP B 25 GLY B 27 SITE 5 AC1 25 ALA B 28 ASP B 29 ASP B 30 VAL B 32 SITE 6 AC1 25 ILE B 47 GLY B 48 PRO B 81 HOH B 511 SITE 7 AC1 25 HOH B 621 CRYST1 51.700 59.200 62.450 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019342 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016892 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016013 0.00000 MASTER 344 0 5 2 20 0 7 6 0 0 0 16 END