HEADER HYDROLASE 10-SEP-12 4H17 TITLE CRYSTAL STRUCTURE OF AN ISOCHORISMATASE (PP1826) FROM PSEUDOMONAS TITLE 2 PUTIDA KT2440 AT 1.60 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYDROLASE, ISOCHORISMATASE FAMILY; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA KT2440; SOURCE 3 ORGANISM_TAXID: 160488; SOURCE 4 STRAIN: KT2440; SOURCE 5 GENE: PP_1826; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS ROSSMANN-LIKE FOLD, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 2 15-NOV-17 4H17 1 REMARK REVDAT 1 14-NOV-12 4H17 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF AN ISOCHORISMATASE (PP1826) FROM JRNL TITL 2 PSEUDOMONAS PUTIDA KT2440 AT 1.60 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 51033 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM + TWIN LAW REMARK 3 R VALUE (WORKING + TEST SET) : 0.137 REMARK 3 R VALUE (WORKING SET) : 0.136 REMARK 3 FREE R VALUE : 0.156 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2586 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3157 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.1830 REMARK 3 BIN FREE R VALUE SET COUNT : 147 REMARK 3 BIN FREE R VALUE : 0.2580 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2957 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 442 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.81000 REMARK 3 B22 (A**2) : 5.06000 REMARK 3 B33 (A**2) : -2.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.015 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.015 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.035 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.759 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.966 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3265 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3140 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4457 ; 1.600 ; 1.996 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7261 ; 1.206 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 439 ; 6.219 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 129 ;30.180 ;23.256 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 515 ;12.050 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;18.953 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 505 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3780 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 719 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 3 195 B 3 195 11366 0.13 0.05 REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.645 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.355 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 196 REMARK 3 ORIGIN FOR THE GROUP (A): -4.1024 1.0632 11.2988 REMARK 3 T TENSOR REMARK 3 T11: 0.0294 T22: 0.0046 REMARK 3 T33: 0.0059 T12: -0.0005 REMARK 3 T13: -0.0026 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 0.2340 L22: 0.0976 REMARK 3 L33: 0.1624 L12: -0.0607 REMARK 3 L13: 0.0394 L23: -0.0595 REMARK 3 S TENSOR REMARK 3 S11: 0.0054 S12: 0.0118 S13: -0.0300 REMARK 3 S21: 0.0038 S22: 0.0143 S23: 0.0059 REMARK 3 S31: 0.0109 S32: -0.0045 S33: -0.0197 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 196 REMARK 3 ORIGIN FOR THE GROUP (A): 10.6905 13.2487 27.2255 REMARK 3 T TENSOR REMARK 3 T11: 0.0347 T22: 0.0035 REMARK 3 T33: 0.0059 T12: -0.0027 REMARK 3 T13: 0.0025 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.3216 L22: 0.2601 REMARK 3 L33: 0.2747 L12: -0.0631 REMARK 3 L13: -0.0268 L23: 0.0940 REMARK 3 S TENSOR REMARK 3 S11: 0.0128 S12: -0.0286 S13: -0.0279 REMARK 3 S21: 0.0234 S22: 0.0154 S23: -0.0008 REMARK 3 S31: -0.0175 S32: 0.0168 S33: -0.0282 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. REMARK 3 5. SULFATE (SO4) AND 1,2-ETHANEDIOL (EDO) FROM THE REMARK 3 CRYSTALLIZATION AND CRYO CONDITION ARE MODELED. 6. DATA ARE REMARK 3 PSUEDO-MEROHEDRALLY TWINNED WITH TWIN LAW (K, H, -L). THE REMARK 3 REFINED TWIN FRACTION WAS 0.36. THE R-FREE TEST SET REFLECTIONS REMARK 3 WERE CHOSEN AT RANDOM WITH THE TWIN LAW INCLUDED. REMARK 4 REMARK 4 4H17 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000074889. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97925,0.97910 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE MARCH 15, 2012 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51103 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 28.973 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.810 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.83 REMARK 200 R MERGE FOR SHELL (I) : 0.53600 REMARK 200 R SYM FOR SHELL (I) : 0.53600 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.200M (NH4)2SO4, 20.00% PEG-3350, NO REMARK 280 BUFFER PH 6.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.58450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.29650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.67400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.29650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.58450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.67400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A DIMER REMARK 300 AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -133.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 176 CG CD OE1 NE2 REMARK 470 ARG B 103 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 112 CD CE NZ REMARK 470 LYS B 165 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 134 -89.79 -115.59 REMARK 500 LYS A 165 -131.68 56.10 REMARK 500 ASP A 166 43.52 -95.96 REMARK 500 ASN A 185 5.00 -157.26 REMARK 500 LYS B 112 30.39 -99.78 REMARK 500 SER B 134 -91.50 -114.17 REMARK 500 SER B 134 -92.88 -114.17 REMARK 500 ASN B 185 4.30 -156.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-399287 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH AN N-TERMINAL PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4H17 A 1 196 UNP Q88LV1 Q88LV1_PSEPK 1 196 DBREF 4H17 B 1 196 UNP Q88LV1 Q88LV1_PSEPK 1 196 SEQADV 4H17 GLY A 0 UNP Q88LV1 LEADER SEQUENCE SEQADV 4H17 GLY B 0 UNP Q88LV1 LEADER SEQUENCE SEQRES 1 A 197 GLY MSE SER VAL PRO THR THR MSE PHE ARG LEU THR GLY SEQRES 2 A 197 ARG ASP TYR PRO PRO ALA LYS LEU SER HIS ALA SER LEU SEQRES 3 A 197 ILE ILE ILE ASP ALA GLN LYS GLU TYR LEU SER GLY PRO SEQRES 4 A 197 LEU LYS LEU SER GLY MSE ASP GLU ALA VAL ALA ASN ILE SEQRES 5 A 197 ALA ARG LEU LEU ASP ALA ALA ARG LYS SER GLY ARG PRO SEQRES 6 A 197 ILE ILE HIS VAL ARG HIS LEU GLY THR VAL GLY GLY ARG SEQRES 7 A 197 PHE ASP PRO GLN GLY PRO ALA GLY GLN PHE ILE PRO GLY SEQRES 8 A 197 LEU GLU PRO LEU GLU GLY GLU ILE VAL ILE GLU LYS ARG SEQRES 9 A 197 MSE PRO ASN ALA PHE LYS ASN THR LYS LEU HIS GLU THR SEQRES 10 A 197 LEU GLN GLU LEU GLY HIS LEU ASP LEU ILE VAL CYS GLY SEQRES 11 A 197 PHE MSE SER HIS SER SER VAL SER THR THR VAL ARG ARG SEQRES 12 A 197 ALA LYS ASP TYR GLY TYR ARG CYS THR LEU VAL GLU ASP SEQRES 13 A 197 ALA SER ALA THR ARG ASP LEU ALA PHE LYS ASP GLY VAL SEQRES 14 A 197 ILE PRO ALA ALA GLN ILE HIS GLN CYS GLU MSE ALA VAL SEQRES 15 A 197 MSE ALA ASP ASN PHE ALA CYS VAL ALA PRO THR ALA SER SEQRES 16 A 197 LEU ILE SEQRES 1 B 197 GLY MSE SER VAL PRO THR THR MSE PHE ARG LEU THR GLY SEQRES 2 B 197 ARG ASP TYR PRO PRO ALA LYS LEU SER HIS ALA SER LEU SEQRES 3 B 197 ILE ILE ILE ASP ALA GLN LYS GLU TYR LEU SER GLY PRO SEQRES 4 B 197 LEU LYS LEU SER GLY MSE ASP GLU ALA VAL ALA ASN ILE SEQRES 5 B 197 ALA ARG LEU LEU ASP ALA ALA ARG LYS SER GLY ARG PRO SEQRES 6 B 197 ILE ILE HIS VAL ARG HIS LEU GLY THR VAL GLY GLY ARG SEQRES 7 B 197 PHE ASP PRO GLN GLY PRO ALA GLY GLN PHE ILE PRO GLY SEQRES 8 B 197 LEU GLU PRO LEU GLU GLY GLU ILE VAL ILE GLU LYS ARG SEQRES 9 B 197 MSE PRO ASN ALA PHE LYS ASN THR LYS LEU HIS GLU THR SEQRES 10 B 197 LEU GLN GLU LEU GLY HIS LEU ASP LEU ILE VAL CYS GLY SEQRES 11 B 197 PHE MSE SER HIS SER SER VAL SER THR THR VAL ARG ARG SEQRES 12 B 197 ALA LYS ASP TYR GLY TYR ARG CYS THR LEU VAL GLU ASP SEQRES 13 B 197 ALA SER ALA THR ARG ASP LEU ALA PHE LYS ASP GLY VAL SEQRES 14 B 197 ILE PRO ALA ALA GLN ILE HIS GLN CYS GLU MSE ALA VAL SEQRES 15 B 197 MSE ALA ASP ASN PHE ALA CYS VAL ALA PRO THR ALA SER SEQRES 16 B 197 LEU ILE MODRES 4H17 MSE A 1 MET SELENOMETHIONINE MODRES 4H17 MSE A 7 MET SELENOMETHIONINE MODRES 4H17 MSE A 44 MET SELENOMETHIONINE MODRES 4H17 MSE A 104 MET SELENOMETHIONINE MODRES 4H17 MSE A 131 MET SELENOMETHIONINE MODRES 4H17 MSE A 179 MET SELENOMETHIONINE MODRES 4H17 MSE A 182 MET SELENOMETHIONINE MODRES 4H17 MSE B 7 MET SELENOMETHIONINE MODRES 4H17 MSE B 44 MET SELENOMETHIONINE MODRES 4H17 MSE B 104 MET SELENOMETHIONINE MODRES 4H17 MSE B 131 MET SELENOMETHIONINE MODRES 4H17 MSE B 179 MET SELENOMETHIONINE MODRES 4H17 MSE B 182 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 7 8 HET MSE A 44 8 HET MSE A 104 8 HET MSE A 131 8 HET MSE A 179 8 HET MSE A 182 8 HET MSE B 7 8 HET MSE B 44 8 HET MSE B 104 8 HET MSE B 131 8 HET MSE B 179 8 HET MSE B 182 8 HET SO4 A 201 5 HET SO4 A 202 5 HET SO4 A 203 5 HET SO4 A 204 5 HET EDO A 205 4 HET EDO A 206 4 HET SO4 B 201 5 HET SO4 B 202 5 HET EDO B 203 4 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 13(C5 H11 N O2 SE) FORMUL 3 SO4 6(O4 S 2-) FORMUL 7 EDO 3(C2 H6 O2) FORMUL 12 HOH *442(H2 O) HELIX 1 1 THR A 6 THR A 11 1 6 HELIX 2 2 LYS A 19 SER A 21 5 3 HELIX 3 3 GLN A 31 LYS A 40 5 10 HELIX 4 4 GLY A 43 SER A 61 1 19 HELIX 5 5 GLY A 82 GLN A 86 5 5 HELIX 6 6 LYS A 112 GLY A 121 1 10 HELIX 7 7 SER A 134 TYR A 146 1 13 HELIX 8 8 PRO A 170 PHE A 186 1 17 HELIX 9 9 PRO A 191 LEU A 195 5 5 HELIX 10 10 THR B 6 THR B 11 1 6 HELIX 11 11 LYS B 19 ALA B 23 5 5 HELIX 12 12 GLN B 31 SER B 36 5 6 HELIX 13 13 GLY B 43 SER B 61 1 19 HELIX 14 14 GLY B 82 GLN B 86 5 5 HELIX 15 15 LYS B 112 GLY B 121 1 10 HELIX 16 16 SER B 134 TYR B 146 1 13 HELIX 17 17 PRO B 170 PHE B 186 1 17 HELIX 18 18 PRO B 191 LEU B 195 5 5 SHEET 1 A 6 ILE A 98 LYS A 102 0 SHEET 2 A 6 ILE A 65 HIS A 70 1 N HIS A 67 O ILE A 98 SHEET 3 A 6 ALA A 23 ILE A 28 1 N ILE A 27 O ILE A 66 SHEET 4 A 6 ASP A 124 PHE A 130 1 O ILE A 126 N ILE A 26 SHEET 5 A 6 ARG A 149 ALA A 158 1 O THR A 151 N LEU A 125 SHEET 6 A 6 CYS A 188 ALA A 190 1 O CYS A 188 N LEU A 152 SHEET 1 B 2 LEU A 162 PHE A 164 0 SHEET 2 B 2 GLY A 167 ILE A 169 -1 O ILE A 169 N LEU A 162 SHEET 1 C 6 ILE B 98 LYS B 102 0 SHEET 2 C 6 ILE B 65 HIS B 70 1 N HIS B 67 O ILE B 98 SHEET 3 C 6 SER B 24 ILE B 28 1 N LEU B 25 O ILE B 66 SHEET 4 C 6 ASP B 124 PHE B 130 1 O ILE B 126 N ILE B 26 SHEET 5 C 6 ARG B 149 ALA B 158 1 O ARG B 149 N LEU B 125 SHEET 6 C 6 CYS B 188 ALA B 190 1 O CYS B 188 N LEU B 152 SHEET 1 D 2 LEU B 162 PHE B 164 0 SHEET 2 D 2 GLY B 167 ILE B 169 -1 O ILE B 169 N LEU B 162 LINK C GLY A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N SER A 2 1555 1555 1.34 LINK C THR A 6 N MSE A 7 1555 1555 1.32 LINK C MSE A 7 N PHE A 8 1555 1555 1.33 LINK C GLY A 43 N MSE A 44 1555 1555 1.33 LINK C MSE A 44 N ASP A 45 1555 1555 1.34 LINK C ARG A 103 N MSE A 104 1555 1555 1.33 LINK C MSE A 104 N PRO A 105 1555 1555 1.35 LINK C PHE A 130 N MSE A 131 1555 1555 1.35 LINK C MSE A 131 N SER A 132 1555 1555 1.32 LINK C GLU A 178 N MSE A 179 1555 1555 1.34 LINK C MSE A 179 N ALA A 180 1555 1555 1.33 LINK C VAL A 181 N MSE A 182 1555 1555 1.33 LINK C MSE A 182 N ALA A 183 1555 1555 1.34 LINK C THR B 6 N MSE B 7 1555 1555 1.33 LINK C MSE B 7 N PHE B 8 1555 1555 1.34 LINK C GLY B 43 N MSE B 44 1555 1555 1.32 LINK C MSE B 44 N ASP B 45 1555 1555 1.34 LINK C ARG B 103 N MSE B 104 1555 1555 1.33 LINK C MSE B 104 N PRO B 105 1555 1555 1.33 LINK C PHE B 130 N MSE B 131 1555 1555 1.33 LINK C MSE B 131 N SER B 132 1555 1555 1.34 LINK C GLU B 178 N MSE B 179 1555 1555 1.33 LINK C MSE B 179 N ALA B 180 1555 1555 1.33 LINK C VAL B 181 N MSE B 182 1555 1555 1.34 LINK C MSE B 182 N ALA B 183 1555 1555 1.34 CISPEP 1 PHE A 130 MSE A 131 0 -16.51 CISPEP 2 PHE B 130 MSE B 131 0 -15.01 SITE 1 AC1 8 ASP A 29 TYR A 34 HIS A 70 MSE A 131 SITE 2 AC1 8 SER A 134 SER A 135 HOH A 315 MSE B 7 SITE 1 AC2 10 ASN A 106 PHE A 108 LYS A 109 ARG A 142 SITE 2 AC2 10 TYR A 146 HOH A 322 HOH A 411 HOH A 490 SITE 3 AC2 10 HOH A 517 ARG B 142 SITE 1 AC3 9 HIS A 70 LEU A 71 GLY A 72 PHE A 78 SITE 2 AC3 9 LYS A 102 ARG A 103 HOH A 329 HOH A 381 SITE 3 AC3 9 ARG B 13 SITE 1 AC4 8 GLY A 0 THR A 11 ARG A 13 HOH A 379 SITE 2 AC4 8 HOH A 488 HOH A 506 THR B 73 ARG B 77 SITE 1 AC5 8 THR A 73 GLY A 76 ARG A 77 ILE A 98 SITE 2 AC5 8 VAL A 99 HOH A 313 HOH A 329 LEU B 10 SITE 1 AC6 4 SER A 42 ALA A 158 THR A 159 HOH A 373 SITE 1 AC7 10 ARG A 142 ASN B 106 PHE B 108 LYS B 109 SITE 2 AC7 10 ARG B 142 TYR B 146 HOH B 315 HOH B 343 SITE 3 AC7 10 HOH B 357 HOH B 402 SITE 1 AC8 8 TYR B 34 MSE B 131 SER B 134 SER B 135 SITE 2 AC8 8 HOH B 323 HOH B 412 HOH B 424 HOH B 452 SITE 1 AC9 5 SER B 42 ALA B 158 THR B 159 HOH B 367 SITE 2 AC9 5 HOH B 418 CRYST1 49.169 49.348 156.593 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020338 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020264 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006386 0.00000 MASTER 390 0 22 18 16 0 20 6 0 0 0 32 END