HEADER HYDROLASE 30-AUG-12 4GVJ TITLE TYK2 (JH1) IN COMPLEX WITH ADENOSINE DI-PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-RECEPTOR TYROSINE-PROTEIN KINASE TYK2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, UNP RESIDUES 885-1176; COMPND 5 EC: 2.7.10.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TYK2; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: TNI; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS KINASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.LIANG,A.V.ABBEMA,L.BAO,K.BARRETT,M.BERESINI,L.BEREZHKOVSKIY, AUTHOR 2 W.BLAIR,C.CHANG,J.DRISCOLL,C.EIGENBROT,N.GHILARDI,P.GIBBONS, AUTHOR 3 J.HALLADAY,A.JOHNSON,P.B.KOHLI,Y.LAI,M.LIIMATTA,P.MANTIK, AUTHOR 4 K.MENGHRAJANI,J.MURRAY,A.SAMBRONE,Y.SHAO,S.SHIA,Y.SHIN,J.SMITH, AUTHOR 5 S.SOHN,M.STANLEY,V.TSUI,M.ULTSCH,L.WU,B.ZHANG,S.MAGNUSON REVDAT 2 08-JUN-16 4GVJ 1 HEADER REVDAT 1 14-AUG-13 4GVJ 0 JRNL AUTH J.LIANG,V.TSUI,A.VAN ABBEMA,L.BAO,K.BARRETT,M.BERESINI, JRNL AUTH 2 L.BEREZHKOVSKIY,W.S.BLAIR,C.CHANG,J.DRISCOLL,C.EIGENBROT, JRNL AUTH 3 N.GHILARDI,P.GIBBONS,J.HALLADAY,A.JOHNSON,P.B.KOHLI,Y.LAI, JRNL AUTH 4 M.LIIMATTA,P.MANTIK,K.MENGHRAJANI,J.MURRAY,A.SAMBRONE, JRNL AUTH 5 Y.XIAO,S.SHIA,Y.SHIN,J.SMITH,S.SOHN,M.STANLEY,M.ULTSCH, JRNL AUTH 6 B.ZHANG,L.C.WU,S.MAGNUSON JRNL TITL LEAD IDENTIFICATION OF NOVEL AND SELECTIVE TYK2 INHIBITORS. JRNL REF EUR.J.MED.CHEM. V. 67 175 2013 JRNL REFN ISSN 0223-5234 JRNL PMID 23867602 JRNL DOI 10.1016/J.EJMECH.2013.03.070 REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 19030 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.410 REMARK 3 FREE R VALUE TEST SET COUNT : 1030 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.14 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2703 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2192 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2549 REMARK 3 BIN R VALUE (WORKING SET) : 0.2173 REMARK 3 BIN FREE R VALUE : 0.2482 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.70 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 154 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2352 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 89 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -10.98220 REMARK 3 B22 (A**2) : 4.83980 REMARK 3 B33 (A**2) : 6.14240 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.274 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.197 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2449 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3323 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 847 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 53 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 371 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2449 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 2 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 299 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2799 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.04 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.08 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.03 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|890 - A|916 } REMARK 3 ORIGIN FOR THE GROUP (A): 3.8260 17.0454 -8.8231 REMARK 3 T TENSOR REMARK 3 T11: 0.0232 T22: -0.1432 REMARK 3 T33: -0.0887 T12: 0.0088 REMARK 3 T13: 0.0412 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 4.4770 L22: 0.6202 REMARK 3 L33: 4.8451 L12: -1.2227 REMARK 3 L13: 0.0432 L23: 1.6597 REMARK 3 S TENSOR REMARK 3 S11: 0.0150 S12: -0.2394 S13: 0.0090 REMARK 3 S21: 0.1239 S22: 0.0804 S23: 0.3137 REMARK 3 S31: -0.1926 S32: -0.1593 S33: -0.0954 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|917 - A|1017 } REMARK 3 ORIGIN FOR THE GROUP (A): 11.9964 7.6641 -11.6438 REMARK 3 T TENSOR REMARK 3 T11: -0.0298 T22: -0.0791 REMARK 3 T33: -0.0663 T12: -0.0328 REMARK 3 T13: -0.0208 T23: -0.0194 REMARK 3 L TENSOR REMARK 3 L11: 0.8877 L22: 2.2614 REMARK 3 L33: 1.8203 L12: -0.4318 REMARK 3 L13: -0.2793 L23: 0.4270 REMARK 3 S TENSOR REMARK 3 S11: 0.0413 S12: -0.2190 S13: 0.1114 REMARK 3 S21: 0.4145 S22: 0.0507 S23: -0.2220 REMARK 3 S31: -0.3073 S32: 0.0170 S33: -0.0920 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|1018 - A|1076 } REMARK 3 ORIGIN FOR THE GROUP (A): 10.7767 -6.9338 -11.9110 REMARK 3 T TENSOR REMARK 3 T11: -0.0711 T22: -0.0413 REMARK 3 T33: -0.0821 T12: 0.0063 REMARK 3 T13: -0.0071 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 2.8754 L22: 5.0536 REMARK 3 L33: 1.7769 L12: -0.0878 REMARK 3 L13: 0.0663 L23: 0.4127 REMARK 3 S TENSOR REMARK 3 S11: -0.0465 S12: -0.3432 S13: -0.2683 REMARK 3 S21: 0.5287 S22: 0.0856 S23: -0.1059 REMARK 3 S31: 0.0576 S32: -0.0891 S33: -0.0391 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|1077 - A|1177 } REMARK 3 ORIGIN FOR THE GROUP (A): 13.0804 -12.1303 -24.7976 REMARK 3 T TENSOR REMARK 3 T11: -0.1190 T22: -0.0815 REMARK 3 T33: -0.0310 T12: 0.0183 REMARK 3 T13: 0.0094 T23: -0.0207 REMARK 3 L TENSOR REMARK 3 L11: 2.5855 L22: 2.4192 REMARK 3 L33: 0.7510 L12: -0.7564 REMARK 3 L13: 0.0561 L23: -0.4078 REMARK 3 S TENSOR REMARK 3 S11: 0.0247 S12: 0.1388 S13: -0.2056 REMARK 3 S21: -0.0879 S22: -0.0723 S23: -0.1706 REMARK 3 S31: 0.0786 S32: 0.0306 S33: 0.0476 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GVJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-SEP-12. REMARK 100 THE RCSB ID CODE IS RCSB074685. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS- BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19030 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.69000 REMARK 200 FOR THE DATA SET : 25.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.58100 REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3NZ0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-30% W/V PEG 3350, 0.2M MG SULFATE, REMARK 280 0.1M MES , PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.16300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.66050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.02550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.66050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.16300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.02550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 882 REMARK 465 GLY A 883 REMARK 465 SER A 884 REMARK 465 PRO A 885 REMARK 465 ALA A 886 REMARK 465 SER A 887 REMARK 465 ASP A 888 REMARK 465 HIS A 1179 REMARK 465 HIS A 1180 REMARK 465 HIS A 1181 REMARK 465 HIS A 1182 REMARK 465 HIS A 1183 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 917 76.55 -118.14 REMARK 500 SER A 973 -145.43 -153.62 REMARK 500 ARG A1022 -0.89 71.47 REMARK 500 ASP A1023 43.65 -146.71 REMARK 500 ASP A1034 -14.76 -48.22 REMARK 500 ASP A1041 84.34 58.40 REMARK 500 ALA A1115 56.73 -117.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 THR A1120 22.4 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1344 O REMARK 620 2 HOH A1325 O 92.5 REMARK 620 3 ASP A1041 OD2 107.1 159.7 REMARK 620 4 ADP A1201 O1B 92.9 83.0 91.0 REMARK 620 5 ASP A1041 OD1 168.7 98.7 61.7 89.2 REMARK 620 6 HOH A1343 O 91.2 90.6 93.8 172.5 88.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1301 O REMARK 620 2 ADP A1201 O2A 90.0 REMARK 620 3 ASP A1041 OD2 174.9 93.7 REMARK 620 4 ADP A1201 O3B 90.9 92.0 92.5 REMARK 620 5 ASN A1028 OD1 87.8 89.8 88.7 177.8 REMARK 620 6 HOH A1342 O 92.7 176.1 83.8 85.1 93.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GIH RELATED DB: PDB REMARK 900 RELATED ID: 4GII RELATED DB: PDB REMARK 900 RELATED ID: 4GJ2 RELATED DB: PDB REMARK 900 RELATED ID: 4GJ3 RELATED DB: PDB REMARK 900 RELATED ID: 4GFO RELATED DB: PDB REMARK 900 RELATED ID: 4GFM RELATED DB: PDB REMARK 900 RELATED ID: 4GMY RELATED DB: PDB DBREF 4GVJ A 885 1176 UNP P29597 TYK2_HUMAN 885 1176 SEQADV 4GVJ MET A 882 UNP P29597 EXPRESSION TAG SEQADV 4GVJ GLY A 883 UNP P29597 EXPRESSION TAG SEQADV 4GVJ SER A 884 UNP P29597 EXPRESSION TAG SEQADV 4GVJ ALA A 936 UNP P29597 CYS 936 ENGINEERED MUTATION SEQADV 4GVJ ALA A 969 UNP P29597 GLN 969 ENGINEERED MUTATION SEQADV 4GVJ ALA A 971 UNP P29597 GLU 971 ENGINEERED MUTATION SEQADV 4GVJ ALA A 972 UNP P29597 LYS 972 ENGINEERED MUTATION SEQADV 4GVJ ALA A 1142 UNP P29597 CYS 1142 ENGINEERED MUTATION SEQADV 4GVJ ARG A 1177 UNP P29597 EXPRESSION TAG SEQADV 4GVJ HIS A 1178 UNP P29597 EXPRESSION TAG SEQADV 4GVJ HIS A 1179 UNP P29597 EXPRESSION TAG SEQADV 4GVJ HIS A 1180 UNP P29597 EXPRESSION TAG SEQADV 4GVJ HIS A 1181 UNP P29597 EXPRESSION TAG SEQADV 4GVJ HIS A 1182 UNP P29597 EXPRESSION TAG SEQADV 4GVJ HIS A 1183 UNP P29597 EXPRESSION TAG SEQRES 1 A 302 MET GLY SER PRO ALA SER ASP PRO THR VAL PHE HIS LYS SEQRES 2 A 302 ARG TYR LEU LYS LYS ILE ARG ASP LEU GLY GLU GLY HIS SEQRES 3 A 302 PHE GLY LYS VAL SER LEU TYR CYS TYR ASP PRO THR ASN SEQRES 4 A 302 ASP GLY THR GLY GLU MET VAL ALA VAL LYS ALA LEU LYS SEQRES 5 A 302 ALA ASP ALA GLY PRO GLN HIS ARG SER GLY TRP LYS GLN SEQRES 6 A 302 GLU ILE ASP ILE LEU ARG THR LEU TYR HIS GLU HIS ILE SEQRES 7 A 302 ILE LYS TYR LYS GLY CYS CYS GLU ASP ALA GLY ALA ALA SEQRES 8 A 302 SER LEU GLN LEU VAL MET GLU TYR VAL PRO LEU GLY SER SEQRES 9 A 302 LEU ARG ASP TYR LEU PRO ARG HIS SER ILE GLY LEU ALA SEQRES 10 A 302 GLN LEU LEU LEU PHE ALA GLN GLN ILE CYS GLU GLY MET SEQRES 11 A 302 ALA TYR LEU HIS ALA GLN HIS TYR ILE HIS ARG ASP LEU SEQRES 12 A 302 ALA ALA ARG ASN VAL LEU LEU ASP ASN ASP ARG LEU VAL SEQRES 13 A 302 LYS ILE GLY ASP PHE GLY LEU ALA LYS ALA VAL PRO GLU SEQRES 14 A 302 GLY HIS GLU TYR TYR ARG VAL ARG GLU ASP GLY ASP SER SEQRES 15 A 302 PRO VAL PHE TRP TYR ALA PRO GLU CYS LEU LYS GLU TYR SEQRES 16 A 302 LYS PHE TYR TYR ALA SER ASP VAL TRP SER PHE GLY VAL SEQRES 17 A 302 THR LEU TYR GLU LEU LEU THR HIS CYS ASP SER SER GLN SEQRES 18 A 302 SER PRO PRO THR LYS PHE LEU GLU LEU ILE GLY ILE ALA SEQRES 19 A 302 GLN GLY GLN MET THR VAL LEU ARG LEU THR GLU LEU LEU SEQRES 20 A 302 GLU ARG GLY GLU ARG LEU PRO ARG PRO ASP LYS CYS PRO SEQRES 21 A 302 ALA GLU VAL TYR HIS LEU MET LYS ASN CYS TRP GLU THR SEQRES 22 A 302 GLU ALA SER PHE ARG PRO THR PHE GLU ASN LEU ILE PRO SEQRES 23 A 302 ILE LEU LYS THR VAL HIS GLU LYS TYR ARG HIS HIS HIS SEQRES 24 A 302 HIS HIS HIS HET ADP A1201 31 HET MG A1202 1 HET MG A1203 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *89(H2 O) HELIX 1 1 HIS A 893 ARG A 895 5 3 HELIX 2 2 GLY A 937 LEU A 954 1 18 HELIX 3 3 SER A 985 LEU A 990 1 6 HELIX 4 4 PRO A 991 HIS A 993 5 3 HELIX 5 5 GLY A 996 GLN A 1017 1 22 HELIX 6 6 ALA A 1025 ARG A 1027 5 3 HELIX 7 7 PRO A 1064 TYR A 1068 5 5 HELIX 8 8 ALA A 1069 TYR A 1076 1 8 HELIX 9 9 TYR A 1080 THR A 1096 1 17 HELIX 10 10 ASP A 1099 GLN A 1102 5 4 HELIX 11 11 SER A 1103 GLY A 1113 1 11 HELIX 12 12 GLN A 1116 GLN A 1118 5 3 HELIX 13 13 MET A 1119 ARG A 1130 1 12 HELIX 14 14 PRO A 1141 TRP A 1152 1 12 HELIX 15 15 GLU A 1155 ARG A 1159 5 5 HELIX 16 16 THR A 1161 ARG A 1177 1 17 SHEET 1 A 6 VAL A 891 PHE A 892 0 SHEET 2 A 6 TYR A 962 ASP A 968 1 O CYS A 965 N PHE A 892 SHEET 3 A 6 SER A 973 GLU A 979 -1 O GLN A 975 N CYS A 966 SHEET 4 A 6 GLU A 925 LEU A 932 -1 N ALA A 928 O MET A 978 SHEET 5 A 6 GLY A 909 TYR A 916 -1 N TYR A 916 O GLU A 925 SHEET 6 A 6 LEU A 897 GLY A 904 -1 N ARG A 901 O LEU A 913 SHEET 1 B 2 TYR A1019 ILE A1020 0 SHEET 2 B 2 LYS A1046 ALA A1047 -1 O LYS A1046 N ILE A1020 SHEET 1 C 2 VAL A1029 ASN A1033 0 SHEET 2 C 2 LEU A1036 ILE A1039 -1 O LYS A1038 N LEU A1030 SHEET 1 D 2 TYR A1054 ARG A1056 0 SHEET 2 D 2 LYS A1077 TYR A1079 -1 O PHE A1078 N TYR A1055 LINK MG MG A1202 O HOH A1344 1555 1555 1.93 LINK MG MG A1202 O HOH A1325 1555 1555 1.95 LINK MG MG A1203 O HOH A1301 1555 1555 1.96 LINK O2A ADP A1201 MG MG A1203 1555 1555 1.99 LINK OD2 ASP A1041 MG MG A1203 1555 1555 2.02 LINK O3B ADP A1201 MG MG A1203 1555 1555 2.07 LINK OD1 ASN A1028 MG MG A1203 1555 1555 2.10 LINK OD2 ASP A1041 MG MG A1202 1555 1555 2.13 LINK O1B ADP A1201 MG MG A1202 1555 1555 2.15 LINK OD1 ASP A1041 MG MG A1202 1555 1555 2.15 LINK MG MG A1202 O HOH A1343 1555 1555 2.19 LINK MG MG A1203 O HOH A1342 1555 1555 2.21 CISPEP 1 GLU A 905 GLY A 906 0 1.41 CISPEP 2 HIS A 907 PHE A 908 0 12.05 CISPEP 3 ALA A 971 ALA A 972 0 -0.93 SITE 1 AC1 22 VAL A 911 ALA A 928 LYS A 930 GLU A 979 SITE 2 AC1 22 TYR A 980 VAL A 981 ASP A 988 ARG A1027 SITE 3 AC1 22 ASN A1028 LEU A1030 ASP A1041 MG A1202 SITE 4 AC1 22 MG A1203 HOH A1301 HOH A1312 HOH A1316 SITE 5 AC1 22 HOH A1325 HOH A1330 HOH A1342 HOH A1344 SITE 6 AC1 22 HOH A1348 HOH A1355 SITE 1 AC2 7 ASP A1023 ASP A1041 ADP A1201 MG A1203 SITE 2 AC2 7 HOH A1325 HOH A1343 HOH A1344 SITE 1 AC3 6 ASN A1028 ASP A1041 ADP A1201 MG A1202 SITE 2 AC3 6 HOH A1301 HOH A1342 CRYST1 36.326 74.051 105.321 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027528 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013504 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009495 0.00000 MASTER 386 0 3 16 12 0 10 6 0 0 0 24 END