HEADER TRANSFERASE 29-AUG-12 4GUD TITLE CRYSTAL STRUCTURE OF AMIDOTRANSFERASE HISH FROM VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISH; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: IGP SYNTHASE GLUTAMINE AMIDOTRANSFERASE SUBUNIT, IGP COMPND 5 SYNTHASE SUBUNIT HISH, IMGP SYNTHASE SUBUNIT HISH, IGPS SUBUNIT HISH; COMPND 6 EC: 2.4.2.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 243277; SOURCE 4 STRAIN: O1 BIOVAR EL TOR STR. N16961; SOURCE 5 GENE: HISH, VC_1136; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG28 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 3 DISEASES, CSGID, ALPHA-BETA SANDWICH, CYTOSOL, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR N.MALTSEVA,Y.KIM,S.SHATSMAN,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 2 15-NOV-17 4GUD 1 JRNL REMARK REVDAT 1 12-SEP-12 4GUD 0 JRNL AUTH N.MALTSEVA,Y.KIM,S.SHATSMAN,W.F.ANDERSON,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF AMIDOTRANSFERASE HISH FROM VIBRIO JRNL TITL 2 CHOLERAE. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_920) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 33619 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1694 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.1472 - 4.3723 0.97 2821 152 0.1848 0.2067 REMARK 3 2 4.3723 - 3.4717 0.99 2728 152 0.1538 0.1636 REMARK 3 3 3.4717 - 3.0333 0.99 2678 151 0.1728 0.2079 REMARK 3 4 3.0333 - 2.7561 0.99 2700 131 0.1752 0.2223 REMARK 3 5 2.7561 - 2.5586 0.99 2630 144 0.1819 0.2150 REMARK 3 6 2.5586 - 2.4078 0.99 2650 149 0.1776 0.2127 REMARK 3 7 2.4078 - 2.2873 0.99 2665 145 0.1803 0.2595 REMARK 3 8 2.2873 - 2.1877 0.99 2649 144 0.1766 0.2092 REMARK 3 9 2.1877 - 2.1035 1.00 2651 130 0.1761 0.2149 REMARK 3 10 2.1035 - 2.0310 1.00 2657 150 0.1715 0.2151 REMARK 3 11 2.0310 - 1.9675 1.00 2648 121 0.1728 0.2279 REMARK 3 12 1.9675 - 1.9112 0.92 2448 125 0.1917 0.2421 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 29.06 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.86590 REMARK 3 B22 (A**2) : -3.80270 REMARK 3 B33 (A**2) : 7.66860 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3394 REMARK 3 ANGLE : 0.889 4614 REMARK 3 CHIRALITY : 0.061 508 REMARK 3 PLANARITY : 0.003 613 REMARK 3 DIHEDRAL : 14.924 1285 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 3:40) REMARK 3 ORIGIN FOR THE GROUP (A): 61.4484 11.4156 37.8771 REMARK 3 T TENSOR REMARK 3 T11: 0.1216 T22: 0.1415 REMARK 3 T33: 0.1995 T12: 0.0238 REMARK 3 T13: 0.0037 T23: -0.0522 REMARK 3 L TENSOR REMARK 3 L11: 2.6787 L22: 3.3466 REMARK 3 L33: 4.9144 L12: 0.3529 REMARK 3 L13: -0.9254 L23: -1.4923 REMARK 3 S TENSOR REMARK 3 S11: -0.0125 S12: 0.1715 S13: -0.0729 REMARK 3 S21: -0.0823 S22: 0.0608 S23: 0.3749 REMARK 3 S31: 0.0578 S32: -0.2921 S33: -0.0721 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 41:99) REMARK 3 ORIGIN FOR THE GROUP (A): 67.4707 4.1085 26.1846 REMARK 3 T TENSOR REMARK 3 T11: 0.1454 T22: 0.1679 REMARK 3 T33: 0.1632 T12: -0.0053 REMARK 3 T13: -0.0091 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 1.4738 L22: 2.5758 REMARK 3 L33: 3.0102 L12: -0.2255 REMARK 3 L13: -0.0449 L23: 1.2897 REMARK 3 S TENSOR REMARK 3 S11: 0.0095 S12: 0.2821 S13: -0.0364 REMARK 3 S21: -0.4324 S22: -0.1564 S23: 0.1571 REMARK 3 S31: -0.0381 S32: -0.3840 S33: 0.1311 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 100:154) REMARK 3 ORIGIN FOR THE GROUP (A): 70.0883 -9.2306 35.1151 REMARK 3 T TENSOR REMARK 3 T11: 0.0750 T22: 0.0914 REMARK 3 T33: 0.1040 T12: 0.0170 REMARK 3 T13: 0.0065 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 1.1664 L22: 2.3928 REMARK 3 L33: 1.2652 L12: 0.4058 REMARK 3 L13: -0.7055 L23: -0.5682 REMARK 3 S TENSOR REMARK 3 S11: -0.0570 S12: 0.0306 S13: -0.0458 REMARK 3 S21: -0.1095 S22: 0.0160 S23: -0.1863 REMARK 3 S31: 0.0791 S32: 0.0046 S33: 0.0331 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 155:203) REMARK 3 ORIGIN FOR THE GROUP (A): 71.1034 -4.0984 38.8714 REMARK 3 T TENSOR REMARK 3 T11: 0.0766 T22: 0.0993 REMARK 3 T33: 0.0900 T12: 0.0044 REMARK 3 T13: -0.0312 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.5797 L22: 2.8899 REMARK 3 L33: 1.3999 L12: 0.6456 REMARK 3 L13: -0.5565 L23: -0.0390 REMARK 3 S TENSOR REMARK 3 S11: 0.0258 S12: -0.0674 S13: -0.1042 REMARK 3 S21: 0.1056 S22: -0.0368 S23: -0.1295 REMARK 3 S31: -0.0383 S32: 0.0027 S33: -0.0010 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 2:25) REMARK 3 ORIGIN FOR THE GROUP (A): 50.6322 18.9998 31.0791 REMARK 3 T TENSOR REMARK 3 T11: 0.1335 T22: 0.1747 REMARK 3 T33: 0.2266 T12: 0.0329 REMARK 3 T13: 0.0074 T23: -0.0594 REMARK 3 L TENSOR REMARK 3 L11: 3.4751 L22: 2.8853 REMARK 3 L33: 4.6159 L12: -0.6101 REMARK 3 L13: 1.7878 L23: 1.1332 REMARK 3 S TENSOR REMARK 3 S11: 0.1822 S12: 0.3355 S13: -0.4285 REMARK 3 S21: -0.1603 S22: -0.0051 S23: 0.1345 REMARK 3 S31: 0.3551 S32: -0.0912 S33: -0.0892 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 26:100) REMARK 3 ORIGIN FOR THE GROUP (A): 48.4050 24.8044 43.6595 REMARK 3 T TENSOR REMARK 3 T11: 0.1094 T22: 0.0862 REMARK 3 T33: 0.1384 T12: -0.0203 REMARK 3 T13: 0.0016 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 2.5948 L22: 1.8610 REMARK 3 L33: 1.9552 L12: -0.7067 REMARK 3 L13: 0.4598 L23: 0.5250 REMARK 3 S TENSOR REMARK 3 S11: -0.0563 S12: -0.2006 S13: -0.1593 REMARK 3 S21: 0.1686 S22: 0.0527 S23: 0.0322 REMARK 3 S31: 0.1872 S32: -0.1387 S33: 0.0245 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 101:189) REMARK 3 ORIGIN FOR THE GROUP (A): 33.2698 28.8860 36.0131 REMARK 3 T TENSOR REMARK 3 T11: 0.0920 T22: 0.0871 REMARK 3 T33: 0.1212 T12: 0.0099 REMARK 3 T13: -0.0018 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 1.9264 L22: 1.1400 REMARK 3 L33: 0.5918 L12: 0.5073 REMARK 3 L13: 0.0087 L23: -0.1369 REMARK 3 S TENSOR REMARK 3 S11: -0.0134 S12: 0.0343 S13: 0.2214 REMARK 3 S21: -0.0148 S22: 0.0131 S23: 0.0541 REMARK 3 S31: -0.0130 S32: 0.0036 S33: -0.0152 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 190:209) REMARK 3 ORIGIN FOR THE GROUP (A): 45.6045 30.8618 22.7404 REMARK 3 T TENSOR REMARK 3 T11: 0.0979 T22: 0.1743 REMARK 3 T33: 0.0141 T12: -0.0476 REMARK 3 T13: 0.0180 T23: 0.0383 REMARK 3 L TENSOR REMARK 3 L11: 0.9986 L22: 1.1706 REMARK 3 L33: 0.9949 L12: 0.2579 REMARK 3 L13: -0.3834 L23: -0.5153 REMARK 3 S TENSOR REMARK 3 S11: -0.0599 S12: 0.2975 S13: 0.0995 REMARK 3 S21: -0.2420 S22: 0.0707 S23: -0.0395 REMARK 3 S31: -0.0789 S32: 0.1486 S33: 0.0188 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GUD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000074643. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33885 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12500 REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.37000 REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CALCIUM CHLORIDE, 0.1M TRIS HCL REMARK 280 PH 8.5, 25% (W/V) PEG 4000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 42.21100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.11700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.21100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.11700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: TWO MONOMERS IN THE ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 GLY A 93 REMARK 465 GLN A 94 REMARK 465 LYS A 95 REMARK 465 ALA A 96 REMARK 465 ARG A 204 REMARK 465 GLY A 205 REMARK 465 GLU A 206 REMARK 465 ASN A 207 REMARK 465 LEU A 208 REMARK 465 TYR A 209 REMARK 465 PHE A 210 REMARK 465 GLN A 211 REMARK 465 MSE B 1 REMARK 465 GLY B 93 REMARK 465 GLN B 94 REMARK 465 LYS B 95 REMARK 465 ALA B 96 REMARK 465 ASP B 97 REMARK 465 ARG B 203A REMARK 465 GLY B 203B REMARK 465 GLU B 203C REMARK 465 GLN B 210 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 79 -108.55 55.58 REMARK 500 CYS A 102 -160.56 -109.13 REMARK 500 CYS A 102 -160.56 -105.82 REMARK 500 SER A 189 31.77 -97.39 REMARK 500 SER A 190 -143.14 56.48 REMARK 500 CYS B 79 -111.01 57.03 REMARK 500 CYS B 102 -160.07 -110.25 REMARK 500 SER B 190 -140.08 54.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP04502 RELATED DB: TARGETTRACK DBREF 4GUD A 1 203 UNP Q9KSX0 HIS5_VIBCH 1 203 DBREF 4GUD B 1 203 UNP Q9KSX0 HIS5_VIBCH 1 203 SEQADV 4GUD ARG A 204 UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD GLY A 205 UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD GLU A 206 UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD ASN A 207 UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD LEU A 208 UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD TYR A 209 UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD PHE A 210 UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD GLN A 211 UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD ARG B 203A UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD GLY B 203B UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD GLU B 203C UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD ASN B 206 UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD LEU B 207 UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD TYR B 208 UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD PHE B 209 UNP Q9KSX0 EXPRESSION TAG SEQADV 4GUD GLN B 210 UNP Q9KSX0 EXPRESSION TAG SEQRES 1 A 211 MSE THR GLN ASN VAL VAL ILE ILE ASP THR GLY CYS ALA SEQRES 2 A 211 ASN ILE SER SER VAL LYS PHE ALA ILE GLU ARG LEU GLY SEQRES 3 A 211 TYR ALA VAL THR ILE SER ARG ASP PRO GLN VAL VAL LEU SEQRES 4 A 211 ALA ALA ASP LYS LEU PHE LEU PRO GLY VAL GLY THR ALA SEQRES 5 A 211 SER GLU ALA MSE LYS ASN LEU THR GLU ARG ASP LEU ILE SEQRES 6 A 211 GLU LEU VAL LYS ARG VAL GLU LYS PRO LEU LEU GLY ILE SEQRES 7 A 211 CYS LEU GLY MSE GLN LEU LEU GLY LYS LEU SER GLU GLU SEQRES 8 A 211 LYS GLY GLN LYS ALA ASP GLU ILE VAL GLN CYS LEU GLY SEQRES 9 A 211 LEU VAL ASP GLY GLU VAL ARG LEU LEU GLN THR GLY ASP SEQRES 10 A 211 LEU PRO LEU PRO HIS MSE GLY TRP ASN THR VAL GLN VAL SEQRES 11 A 211 LYS GLU GLY HIS PRO LEU PHE ASN GLY ILE GLU PRO ASP SEQRES 12 A 211 ALA TYR PHE TYR PHE VAL HIS SER PHE ALA MSE PRO VAL SEQRES 13 A 211 GLY ASP TYR THR ILE ALA GLN CYS GLU TYR GLY GLN PRO SEQRES 14 A 211 PHE SER ALA ALA ILE GLN ALA GLY ASN TYR TYR GLY VAL SEQRES 15 A 211 GLN PHE HIS PRO GLU ARG SER SER LYS ALA GLY ALA ARG SEQRES 16 A 211 LEU ILE GLN ASN PHE LEU GLU LEU ARG GLY GLU ASN LEU SEQRES 17 A 211 TYR PHE GLN SEQRES 1 B 211 MSE THR GLN ASN VAL VAL ILE ILE ASP THR GLY CYS ALA SEQRES 2 B 211 ASN ILE SER SER VAL LYS PHE ALA ILE GLU ARG LEU GLY SEQRES 3 B 211 TYR ALA VAL THR ILE SER ARG ASP PRO GLN VAL VAL LEU SEQRES 4 B 211 ALA ALA ASP LYS LEU PHE LEU PRO GLY VAL GLY THR ALA SEQRES 5 B 211 SER GLU ALA MSE LYS ASN LEU THR GLU ARG ASP LEU ILE SEQRES 6 B 211 GLU LEU VAL LYS ARG VAL GLU LYS PRO LEU LEU GLY ILE SEQRES 7 B 211 CYS LEU GLY MSE GLN LEU LEU GLY LYS LEU SER GLU GLU SEQRES 8 B 211 LYS GLY GLN LYS ALA ASP GLU ILE VAL GLN CYS LEU GLY SEQRES 9 B 211 LEU VAL ASP GLY GLU VAL ARG LEU LEU GLN THR GLY ASP SEQRES 10 B 211 LEU PRO LEU PRO HIS MSE GLY TRP ASN THR VAL GLN VAL SEQRES 11 B 211 LYS GLU GLY HIS PRO LEU PHE ASN GLY ILE GLU PRO ASP SEQRES 12 B 211 ALA TYR PHE TYR PHE VAL HIS SER PHE ALA MSE PRO VAL SEQRES 13 B 211 GLY ASP TYR THR ILE ALA GLN CYS GLU TYR GLY GLN PRO SEQRES 14 B 211 PHE SER ALA ALA ILE GLN ALA GLY ASN TYR TYR GLY VAL SEQRES 15 B 211 GLN PHE HIS PRO GLU ARG SER SER LYS ALA GLY ALA ARG SEQRES 16 B 211 LEU ILE GLN ASN PHE LEU GLU LEU ARG GLY GLU ASN LEU SEQRES 17 B 211 TYR PHE GLN MODRES 4GUD MSE A 56 MET SELENOMETHIONINE MODRES 4GUD MSE A 82 MET SELENOMETHIONINE MODRES 4GUD MSE A 123 MET SELENOMETHIONINE MODRES 4GUD MSE A 154 MET SELENOMETHIONINE MODRES 4GUD MSE B 56 MET SELENOMETHIONINE MODRES 4GUD MSE B 82 MET SELENOMETHIONINE MODRES 4GUD MSE B 123 MET SELENOMETHIONINE MODRES 4GUD MSE B 154 MET SELENOMETHIONINE HET MSE A 56 8 HET MSE A 82 16 HET MSE A 123 8 HET MSE A 154 8 HET MSE B 56 8 HET MSE B 82 16 HET MSE B 123 8 HET MSE B 154 8 HET GOL A 301 6 HET PEG A 302 7 HET 1PE B 301 16 HET EDO B 302 4 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN 1PE PEG400 HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 GOL C3 H8 O3 FORMUL 4 PEG C4 H10 O3 FORMUL 5 1PE C10 H22 O6 FORMUL 6 EDO C2 H6 O2 FORMUL 7 HOH *269(H2 O) HELIX 1 1 ASN A 14 LEU A 25 1 12 HELIX 2 2 ASP A 34 ALA A 41 1 8 HELIX 3 3 THR A 51 ARG A 62 1 12 HELIX 4 4 LEU A 64 VAL A 71 1 8 HELIX 5 5 CYS A 79 LEU A 84 1 6 HELIX 6 6 HIS A 134 ASN A 138 5 5 HELIX 7 7 HIS A 185 ARG A 188 5 4 HELIX 8 8 SER A 189 LEU A 203 1 15 HELIX 9 9 ASN B 14 LEU B 25 1 12 HELIX 10 10 ASP B 34 ALA B 41 1 8 HELIX 11 11 THR B 51 ARG B 62 1 12 HELIX 12 12 LEU B 64 VAL B 71 1 8 HELIX 13 13 CYS B 79 LEU B 84 1 6 HELIX 14 14 HIS B 134 ASN B 138 5 5 HELIX 15 15 HIS B 185 ARG B 188 5 4 HELIX 16 16 SER B 189 GLU B 202 1 14 SHEET 1 A 8 VAL A 29 SER A 32 0 SHEET 2 A 8 VAL A 5 ILE A 8 1 N ILE A 7 O THR A 30 SHEET 3 A 8 LYS A 43 LEU A 46 1 O PHE A 45 N ILE A 8 SHEET 4 A 8 LEU A 75 ILE A 78 1 O LEU A 76 N LEU A 44 SHEET 5 A 8 TYR A 179 VAL A 182 1 O TYR A 180 N LEU A 75 SHEET 6 A 8 PRO A 169 ALA A 176 -1 N ALA A 176 O TYR A 179 SHEET 7 A 8 THR A 160 GLU A 165 -1 N ILE A 161 O ALA A 173 SHEET 8 A 8 GLN A 129 VAL A 130 -1 N GLN A 129 O GLN A 163 SHEET 1 B 4 VAL A 100 GLN A 101 0 SHEET 2 B 4 LEU A 88 SER A 89 -1 N SER A 89 O VAL A 100 SHEET 3 B 4 GLU A 109 LEU A 112 1 O VAL A 110 N LEU A 88 SHEET 4 B 4 PHE A 152 ALA A 153 -1 O ALA A 153 N ARG A 111 SHEET 1 C 2 HIS A 122 ASN A 126 0 SHEET 2 C 2 PHE A 146 HIS A 150 -1 O PHE A 148 N GLY A 124 SHEET 1 D 8 THR B 30 SER B 32 0 SHEET 2 D 8 VAL B 5 ILE B 8 1 N ILE B 7 O THR B 30 SHEET 3 D 8 LYS B 43 LEU B 46 1 O PHE B 45 N ILE B 8 SHEET 4 D 8 LEU B 75 ILE B 78 1 O LEU B 76 N LEU B 46 SHEET 5 D 8 TYR B 179 VAL B 182 1 O TYR B 180 N LEU B 75 SHEET 6 D 8 PRO B 169 ALA B 176 -1 N ALA B 176 O TYR B 179 SHEET 7 D 8 THR B 160 GLU B 165 -1 N ILE B 161 O ALA B 173 SHEET 8 D 8 GLN B 129 VAL B 130 -1 N GLN B 129 O GLN B 163 SHEET 1 E 4 VAL B 100 GLN B 101 0 SHEET 2 E 4 LEU B 88 SER B 89 -1 N SER B 89 O VAL B 100 SHEET 3 E 4 GLU B 109 LEU B 112 1 O VAL B 110 N LEU B 88 SHEET 4 E 4 PHE B 152 ALA B 153 -1 O ALA B 153 N ARG B 111 SHEET 1 F 2 HIS B 122 ASN B 126 0 SHEET 2 F 2 PHE B 146 HIS B 150 -1 O HIS B 150 N HIS B 122 LINK C ALA A 55 N MSE A 56 1555 1555 1.33 LINK C MSE A 56 N LYS A 57 1555 1555 1.33 LINK C GLY A 81 N AMSE A 82 1555 1555 1.33 LINK C GLY A 81 N BMSE A 82 1555 1555 1.33 LINK C AMSE A 82 N GLN A 83 1555 1555 1.33 LINK C BMSE A 82 N GLN A 83 1555 1555 1.33 LINK C HIS A 122 N MSE A 123 1555 1555 1.33 LINK C MSE A 123 N GLY A 124 1555 1555 1.33 LINK C ALA A 153 N MSE A 154 1555 1555 1.33 LINK C MSE A 154 N PRO A 155 1555 1555 1.34 LINK C ALA B 55 N MSE B 56 1555 1555 1.33 LINK C MSE B 56 N LYS B 57 1555 1555 1.33 LINK C GLY B 81 N AMSE B 82 1555 1555 1.33 LINK C GLY B 81 N BMSE B 82 1555 1555 1.33 LINK C AMSE B 82 N GLN B 83 1555 1555 1.33 LINK C BMSE B 82 N GLN B 83 1555 1555 1.33 LINK C HIS B 122 N MSE B 123 1555 1555 1.32 LINK C MSE B 123 N GLY B 124 1555 1555 1.33 LINK C ALA B 153 N MSE B 154 1555 1555 1.32 LINK C MSE B 154 N PRO B 155 1555 1555 1.34 CISPEP 1 LEU A 120 PRO A 121 0 -8.51 CISPEP 2 LEU B 120 PRO B 121 0 -7.04 SITE 1 AC1 3 TRP A 125 ARG A 188 HOH A 426 SITE 1 AC2 2 TRP A 125 SER B 151 SITE 1 AC3 5 SER A 151 TRP B 125 TYR B 147 ARG B 188 SITE 2 AC3 5 EDO B 302 SITE 1 AC4 1 1PE B 301 CRYST1 84.422 118.234 42.975 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011845 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008458 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023269 0.00000 MASTER 407 0 12 16 28 0 5 6 0 0 0 34 END