HEADER IMMUNE SYSTEM 16-JUL-12 4G4F TITLE CRYSTAL STRUCTURE OF GITRL FROM BUSHBABY COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 18; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OTOLEMUR GARNETTII; SOURCE 3 ORGANISM_TAXID: 30611; SOURCE 4 GENE: GITRL; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS GLUCOCORTICOID-INDUCED TNF RECEPTOR LIGAND, IMMUNE SYSTEM, TNFRSF18, KEYWDS 2 STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW YORK STRUCTURAL GENOMICS KEYWDS 3 RESEARCH CONSORTIUM (NYSGRC) EXPDTA X-RAY DIFFRACTION AUTHOR P.R.KUMAR,R.BHOSLE,S.G.NATHENSON,S.C.ALMO,NEW YORK STRUCTURAL AUTHOR 2 GENOMICS RESEARCH CONSORTIUM (NYSGRC),ATOMS-TO-ANIMALS: THE IMMUNE AUTHOR 3 FUNCTION NETWORK (IFN) REVDAT 1 01-AUG-12 4G4F 0 JRNL AUTH P.R.KUMAR,S.G.NATHENSON,S.C.ALMO, JRNL AUTH 2 NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC), JRNL AUTH 3 ATOMS-TO-ANIMALS: THE IMMUNE FUNCTION NETWORK (IFN) JRNL TITL CRYSTAL STRUCTURE OF GITRL FROM OTOLEMUR GARNETTII JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 10699 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 514 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.1575 - 2.9318 1.00 2739 116 0.1938 0.2090 REMARK 3 2 2.9318 - 2.3271 1.00 2528 138 0.2200 0.2468 REMARK 3 3 2.3271 - 2.0330 1.00 2469 140 0.2164 0.2980 REMARK 3 4 2.0330 - 1.8471 0.99 2449 120 0.2429 0.3095 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 936 REMARK 3 ANGLE : 1.121 1269 REMARK 3 CHIRALITY : 0.084 145 REMARK 3 PLANARITY : 0.004 159 REMARK 3 DIHEDRAL : 14.453 343 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: chain 'A' and (resid 4 through 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5400 -3.1185 -9.8091 REMARK 3 T TENSOR REMARK 3 T11: 0.3181 T22: 0.2466 REMARK 3 T33: 0.3685 T12: 0.0418 REMARK 3 T13: 0.0022 T23: -0.0380 REMARK 3 L TENSOR REMARK 3 L11: 3.9184 L22: 9.0945 REMARK 3 L33: 6.5613 L12: 0.7735 REMARK 3 L13: 0.3205 L23: -5.2627 REMARK 3 S TENSOR REMARK 3 S11: -0.1171 S12: -0.1681 S13: 0.3925 REMARK 3 S21: 0.4800 S22: 0.0188 S23: 0.3030 REMARK 3 S31: -0.3072 S32: -0.1709 S33: 0.0143 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: chain 'A' and (resid 24 through 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0328 -9.8625 -13.7410 REMARK 3 T TENSOR REMARK 3 T11: 0.2213 T22: 0.2301 REMARK 3 T33: 0.2849 T12: -0.0046 REMARK 3 T13: 0.0237 T23: -0.0217 REMARK 3 L TENSOR REMARK 3 L11: 4.1499 L22: 2.2601 REMARK 3 L33: 2.3427 L12: 0.5284 REMARK 3 L13: 0.6940 L23: -0.2959 REMARK 3 S TENSOR REMARK 3 S11: 0.0145 S12: -0.0256 S13: 0.1521 REMARK 3 S21: 0.1613 S22: -0.0215 S23: -0.2406 REMARK 3 S31: -0.0820 S32: 0.2681 S33: 0.0667 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: chain 'A' and (resid 61 through 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0452 -11.5652 -24.9679 REMARK 3 T TENSOR REMARK 3 T11: 0.2750 T22: 0.2769 REMARK 3 T33: 0.3230 T12: -0.0133 REMARK 3 T13: 0.0104 T23: -0.0528 REMARK 3 L TENSOR REMARK 3 L11: 4.3694 L22: 4.8396 REMARK 3 L33: 6.6456 L12: -4.0562 REMARK 3 L13: 4.6882 L23: -4.5454 REMARK 3 S TENSOR REMARK 3 S11: 0.3468 S12: 0.4115 S13: -0.1770 REMARK 3 S21: -0.4514 S22: -0.2160 S23: 0.1309 REMARK 3 S31: 0.4289 S32: 0.2318 S33: -0.1797 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: chain 'A' and (resid 92 through 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.0415 -5.4672 -20.5477 REMARK 3 T TENSOR REMARK 3 T11: 0.2336 T22: 0.2678 REMARK 3 T33: 0.2735 T12: -0.0539 REMARK 3 T13: -0.0102 T23: 0.0432 REMARK 3 L TENSOR REMARK 3 L11: 4.6343 L22: 4.2339 REMARK 3 L33: 3.5491 L12: -0.7453 REMARK 3 L13: 0.8835 L23: 0.1685 REMARK 3 S TENSOR REMARK 3 S11: -0.0854 S12: 0.5184 S13: 0.3879 REMARK 3 S21: -0.5044 S22: -0.0926 S23: -0.3061 REMARK 3 S31: -0.2858 S32: 0.2102 S33: 0.0868 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4G4F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-12. REMARK 100 THE RCSB ID CODE IS RCSB073724. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0750 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10736 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.73100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2Q1M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (20 MM HEPES, PH 7.5, 150 MM REMARK 280 NACL, 10% GLYCEROL, RESERVOIR (0.1M BIS-TRIS-HCL PH 5.5, 0.2M REMARK 280 SODIUM CHLORIDE, 25%(W/V) PEG3350), CRYOPROTECTION (RESERVOIR + REMARK 280 20% MPD), TEMPERATURE 298K, VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 72.36000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 72.36000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.36000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 72.36000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 72.36000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 72.36000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TRIMER GENERATED FROM THE REMARK 300 MONOMER IN THE ASYMMETRIC UNIT BY CRYSTALLOGRAPHIC SYMMETRY REMARK 300 OPERATIONS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -52.19400 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -26.09700 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -45.20133 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -52.19400 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -26.09700 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -45.20133 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 -26.09700 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 -45.20133 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -72.36000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 -52.19400 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 -72.36000 REMARK 350 BIOMT1 6 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 -72.36000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 231 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 264 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 THR A 1 REMARK 465 ALA A 2 REMARK 465 ASN A 3 REMARK 465 THR A 53 REMARK 465 ALA A 54 REMARK 465 TYR A 55 REMARK 465 LYS A 56 REMARK 465 GLY A 57 REMARK 465 VAL A 58 REMARK 465 ALA A 59 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 220 O HOH A 263 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 68 -120.95 52.78 REMARK 500 ASP A 102 114.74 -170.61 REMARK 500 LEU A 121 58.91 -106.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-011107 RELATED DB: TARGETTRACK DBREF 4G4F A -1 124 PDB 4G4F 4G4F -1 124 SEQRES 1 A 126 GLY HIS THR ALA ASN LYS PRO CYS LEU ALA LYS PHE GLU SEQRES 2 A 126 LEU LEU THR SER LYS TRP GLN MET THR SER ARG LYS PRO SEQRES 3 A 126 PRO CYS VAL ASN SER LEU PRO GLU GLY LYS LEU LYS ILE SEQRES 4 A 126 LEU GLN ASP GLY LEU TYR LEU ILE TYR GLY GLN VAL ALA SEQRES 5 A 126 PRO SER THR ALA TYR LYS GLY VAL ALA PRO PHE ALA VAL SEQRES 6 A 126 GLN LEU ARG LYS ASN GLU ALA MET LEU GLN THR LEU THR SEQRES 7 A 126 SER ASN SER THR ILE TYR ASP VAL GLY GLY THR TYR GLU SEQRES 8 A 126 PHE HIS ALA GLY ASP ILE ILE ASP LEU ILE PHE ASP ASP SEQRES 9 A 126 GLU HIS GLN VAL LEU LYS ASN ASN THR TYR TRP GLY ILE SEQRES 10 A 126 VAL LEU LEU ALA ASN LEU PHE ILE SER FORMUL 2 HOH *73(H2 O) HELIX 1 1 ASP A 102 VAL A 106 5 5 HELIX 2 2 LEU A 107 ASN A 110 5 4 SHEET 1 A 5 LYS A 16 MET A 19 0 SHEET 2 A 5 LEU A 7 GLU A 11 -1 N LYS A 9 O GLN A 18 SHEET 3 A 5 TYR A 112 ASN A 120 -1 O TRP A 113 N PHE A 10 SHEET 4 A 5 GLY A 41 GLN A 48 -1 N LEU A 42 O ALA A 119 SHEET 5 A 5 GLY A 86 PHE A 90 -1 O GLY A 86 N ILE A 45 SHEET 1 B 5 VAL A 27 SER A 29 0 SHEET 2 B 5 LYS A 34 ILE A 37 -1 O LYS A 36 N ASN A 28 SHEET 3 B 5 ILE A 95 PHE A 100 -1 O ILE A 96 N LEU A 35 SHEET 4 B 5 PHE A 61 LYS A 67 -1 N ARG A 66 O ASP A 97 SHEET 5 B 5 ALA A 70 SER A 77 -1 O ALA A 70 N LYS A 67 SSBOND 1 CYS A 6 CYS A 26 1555 1555 2.03 CISPEP 1 LYS A 23 PRO A 24 0 -7.73 CRYST1 52.194 52.194 144.720 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019159 0.011062 0.000000 0.00000 SCALE2 0.000000 0.022123 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006910 0.00000 MASTER 386 0 0 2 10 0 0 6 0 0 0 10 END