HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 23-APR-12 4ESN TITLE CRYSTAL STRUCTURE OF A DUF1312 FAMILY PROTEIN (RUMGNA_02503) FROM TITLE 2 RUMINOCOCCUS GNAVUS ATCC 29149 AT 2.20 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RUMINOCOCCUS GNAVUS; SOURCE 3 ORGANISM_COMMON: TBD; SOURCE 4 ORGANISM_TAXID: 411470; SOURCE 5 STRAIN: ATCC 29149; SOURCE 6 GENE: RUMGNA_02503; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PROTEIN OF PF07009 FAMILY, DUF1312, STRUCTURAL GENOMICS, JOINT CENTER KEYWDS 2 FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 24-JAN-18 4ESN 1 JRNL REVDAT 3 15-NOV-17 4ESN 1 REMARK REVDAT 2 24-DEC-14 4ESN 1 TITLE REVDAT 1 20-JUN-12 4ESN 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (RUMGNA_02503) JRNL TITL 2 FROM RUMINOCOCCUS GNAVUS ATCC 29149 AT 2.20 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 9018 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.780 REMARK 3 FREE R VALUE TEST SET COUNT : 431 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.46 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.24 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2490 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1997 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2370 REMARK 3 BIN R VALUE (WORKING SET) : 0.1977 REMARK 3 BIN FREE R VALUE : 0.2388 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.82 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 120 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1178 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 53 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.19330 REMARK 3 B22 (A**2) : -8.39690 REMARK 3 B33 (A**2) : 7.20360 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.339 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1244 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1685 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 608 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 42 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 179 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1244 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 169 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1432 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.17 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.11 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.21 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 27.0854 8.0181 3.5104 REMARK 3 T TENSOR REMARK 3 T11: -0.0612 T22: -0.0794 REMARK 3 T33: -0.0442 T12: 0.0229 REMARK 3 T13: 0.0293 T23: 0.0450 REMARK 3 L TENSOR REMARK 3 L11: 4.6744 L22: 2.1640 REMARK 3 L33: 7.1634 L12: -0.0469 REMARK 3 L13: -1.0777 L23: -0.6355 REMARK 3 S TENSOR REMARK 3 S11: -0.3600 S12: -0.1395 S13: -0.1859 REMARK 3 S21: 0.1177 S22: 0.1252 S23: -0.0269 REMARK 3 S31: 0.3389 S32: -0.0472 S33: 0.2348 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 38.0315 1.0473 18.1546 REMARK 3 T TENSOR REMARK 3 T11: -0.0981 T22: -0.1606 REMARK 3 T33: -0.0483 T12: 0.0095 REMARK 3 T13: -0.0480 T23: 0.0978 REMARK 3 L TENSOR REMARK 3 L11: 3.6875 L22: 3.4809 REMARK 3 L33: 12.4646 L12: -0.0623 REMARK 3 L13: -0.7483 L23: -2.4601 REMARK 3 S TENSOR REMARK 3 S11: 0.2132 S12: 0.0745 S13: -0.0565 REMARK 3 S21: -0.0359 S22: -0.4915 S23: -0.5021 REMARK 3 S31: 0.0232 S32: 0.1070 S33: 0.2783 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. ATOM RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL REMARK 3 S-MET INCORPORATION. 3. POLYETHYLENE GLYCOL (PE4) FROM THE REMARK 3 CRYOPROTECTANT AND CL IONS FROM THE CRYSTALLIZATION CONDITION REMARK 3 HAVE BEEN MODELED IN THE SOLVENT STRUCTURE. 4. ZN ION WAS REMARK 3 MODELED IN THE PUTATIVE ACTIVE CENTER OF EACH PROTOME BASED ON REMARK 3 ANOMALOUS DIFFERENCE MAPS AND EXCITATION SCANS. 5. 11 C-TERMINAL REMARK 3 RESIDUES OF A AND B MOLECULES WERE DISORDERED. 6. NCS RESTRAINTS REMARK 3 WERE APPLIED USING BUSTER'S LSSR RESTRAINT REPRESENTATION (- REMARK 3 AUTONCS). REMARK 4 REMARK 4 4ESN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000072019. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9044 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 28.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08100 REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.69500 REMARK 200 R SYM FOR SHELL (I) : 0.69500 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM NITRATE 20.0% REMARK 280 POLYETHYLENE GLYCOL 3350, NANODROP, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.92700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.76300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.54500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 33.76300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.92700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.54500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -86.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -18 REMARK 465 GLY A -17 REMARK 465 SER A -16 REMARK 465 ASP A -15 REMARK 465 LYS A -14 REMARK 465 ILE A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 SER A 107 REMARK 465 LYS A 108 REMARK 465 GLU A 109 REMARK 465 SER A 110 REMARK 465 GLU A 111 REMARK 465 LEU A 112 REMARK 465 ASP A 113 REMARK 465 GLY A 114 REMARK 465 ILE A 115 REMARK 465 VAL A 116 REMARK 465 ASN A 117 REMARK 465 MSE B -18 REMARK 465 GLY B -17 REMARK 465 SER B -16 REMARK 465 ASP B -15 REMARK 465 LYS B -14 REMARK 465 ILE B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 SER B 107 REMARK 465 LYS B 108 REMARK 465 GLU B 109 REMARK 465 SER B 110 REMARK 465 GLU B 111 REMARK 465 LEU B 112 REMARK 465 ASP B 113 REMARK 465 GLY B 114 REMARK 465 ILE B 115 REMARK 465 VAL B 116 REMARK 465 ASN B 117 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A -3 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 54 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 56 -137.01 64.37 REMARK 500 SER A 87 -8.13 -148.78 REMARK 500 ASP B 57 -19.14 71.64 REMARK 500 SER B 87 -7.62 -149.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 335 O REMARK 620 2 CYS A 80 SG 104.4 REMARK 620 3 CYS A 75 SG 102.4 111.0 REMARK 620 4 CYS A 95 SG 107.5 113.2 116.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 75 SG REMARK 620 2 CYS B 80 SG 111.6 REMARK 620 3 HOH B 318 O 102.1 104.1 REMARK 620 4 CYS B 95 SG 116.7 112.7 108.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE4 B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-416850 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH AN N-TERMINAL PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 33-117 OF THE TARGET REMARK 999 SEQUENCE. ANALYSIS OF THE PURIFIED PROTEIN BY MASS SPECTROMETRY AND REMARK 999 GEL ELECTROPHORESIS SHOWS THAT WHILE THE MAJORITY OF THE PROTEIN REMARK 999 WAS CLEAVED, THERE WAS SOME UNCLEAVED PROTEIN PRESENT. SINCE REMARK 999 ELECTRON DENSITY WAS OBSERVED FOR RESIDUES -2 AND -1 IN BOTH CHAINS, REMARK 999 THE TAG SEQUENCE IS INCLUDED IN THE SEQRES RECORDS. THE CRYSTAL REMARK 999 MAY CONTAIN A MIXTURE OF TAG-ON AND TAG-OFF PROTEIN. DBREF 4ESN A 33 117 UNP A7B4L9 A7B4L9_RUMGN 33 117 DBREF 4ESN B 33 117 UNP A7B4L9 A7B4L9_RUMGN 33 117 SEQADV 4ESN MSE A -18 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN GLY A -17 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN SER A -16 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN ASP A -15 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN LYS A -14 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN ILE A -13 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN HIS A -12 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN HIS A -11 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN HIS A -10 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN HIS A -9 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN HIS A -8 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN HIS A -7 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN GLU A -6 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN ASN A -5 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN LEU A -4 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN TYR A -3 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN PHE A -2 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN GLN A -1 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN GLY A 0 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN MSE B -18 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN GLY B -17 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN SER B -16 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN ASP B -15 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN LYS B -14 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN ILE B -13 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN HIS B -12 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN HIS B -11 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN HIS B -10 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN HIS B -9 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN HIS B -8 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN HIS B -7 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN GLU B -6 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN ASN B -5 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN LEU B -4 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN TYR B -3 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN PHE B -2 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN GLN B -1 UNP A7B4L9 LEADER SEQUENCE SEQADV 4ESN GLY B 0 UNP A7B4L9 LEADER SEQUENCE SEQRES 1 A 104 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 A 104 ASN LEU TYR PHE GLN GLY ALA VAL VAL THR VAL ASP GLY SEQRES 3 A 104 GLU VAL TYR GLY THR TYR SER LEU ALA LYS ASP GLN THR SEQRES 4 A 104 ILE GLU ILE GLN ASP GLY ASN ARG LEU ARG ILE GLN ASN SEQRES 5 A 104 GLY GLN ALA LYS MSE GLU TRP ALA ASP CYS PRO ASP GLN SEQRES 6 A 104 LEU CYS VAL HIS GLN LYS ALA ILE SER ARG THR GLY GLU SEQRES 7 A 104 SER ILE ILE CYS LEU PRO ASN GLN VAL VAL VAL SER VAL SEQRES 8 A 104 GLN GLY SER LYS GLU SER GLU LEU ASP GLY ILE VAL ASN SEQRES 1 B 104 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS GLU SEQRES 2 B 104 ASN LEU TYR PHE GLN GLY ALA VAL VAL THR VAL ASP GLY SEQRES 3 B 104 GLU VAL TYR GLY THR TYR SER LEU ALA LYS ASP GLN THR SEQRES 4 B 104 ILE GLU ILE GLN ASP GLY ASN ARG LEU ARG ILE GLN ASN SEQRES 5 B 104 GLY GLN ALA LYS MSE GLU TRP ALA ASP CYS PRO ASP GLN SEQRES 6 B 104 LEU CYS VAL HIS GLN LYS ALA ILE SER ARG THR GLY GLU SEQRES 7 B 104 SER ILE ILE CYS LEU PRO ASN GLN VAL VAL VAL SER VAL SEQRES 8 B 104 GLN GLY SER LYS GLU SER GLU LEU ASP GLY ILE VAL ASN MODRES 4ESN MSE A 70 MET SELENOMETHIONINE MODRES 4ESN MSE B 70 MET SELENOMETHIONINE HET MSE A 70 8 HET MSE B 70 8 HET ZN A 201 1 HET ZN B 201 1 HET PE4 B 202 24 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM PE4 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}- HETNAM 2 PE4 ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL HETSYN PE4 POLYETHYLENE GLYCOL PEG4000 FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 3 ZN 2(ZN 2+) FORMUL 5 PE4 C16 H34 O8 FORMUL 6 HOH *53(H2 O) HELIX 1 1 GLN A 78 GLN A 83 1 6 HELIX 2 2 GLN B 78 GLN B 83 1 6 SHEET 1 A 4 GLU A 40 SER A 46 0 SHEET 2 A 4 GLY A 0 VAL A 37 -1 N VAL A 35 O TYR A 42 SHEET 3 A 4 VAL A 100 GLN A 105 -1 O SER A 103 N VAL A 34 SHEET 4 A 4 SER A 92 CYS A 95 -1 N ILE A 93 O VAL A 102 SHEET 1 B 3 GLN A 51 ILE A 55 0 SHEET 2 B 3 ASN A 59 GLN A 64 -1 O ILE A 63 N GLN A 51 SHEET 3 B 3 GLN A 67 ALA A 73 -1 O LYS A 69 N ARG A 62 SHEET 1 C 4 GLU B 40 SER B 46 0 SHEET 2 C 4 GLY B 0 VAL B 37 -1 N VAL B 35 O TYR B 42 SHEET 3 C 4 VAL B 100 GLN B 105 -1 O SER B 103 N VAL B 34 SHEET 4 C 4 SER B 92 CYS B 95 -1 N ILE B 93 O VAL B 102 SHEET 1 D 3 GLN B 51 ILE B 55 0 SHEET 2 D 3 ASN B 59 GLN B 64 -1 O ILE B 63 N GLN B 51 SHEET 3 D 3 GLN B 67 ALA B 73 -1 O LYS B 69 N ARG B 62 LINK C LYS A 69 N MSE A 70 1555 1555 1.32 LINK C MSE A 70 N GLU A 71 1555 1555 1.34 LINK C LYS B 69 N MSE B 70 1555 1555 1.35 LINK C MSE B 70 N GLU B 71 1555 1555 1.34 LINK ZN ZN A 201 O HOH A 335 1555 1555 2.24 LINK SG CYS B 75 ZN ZN B 201 1555 1555 2.32 LINK SG CYS A 80 ZN ZN A 201 1555 1555 2.32 LINK SG CYS B 80 ZN ZN B 201 1555 1555 2.33 LINK SG CYS A 75 ZN ZN A 201 1555 1555 2.34 LINK ZN ZN B 201 O HOH B 318 1555 1555 2.34 LINK SG CYS A 95 ZN ZN A 201 1555 1555 2.36 LINK SG CYS B 95 ZN ZN B 201 1555 1555 2.40 SITE 1 AC1 4 CYS A 75 CYS A 80 CYS A 95 HOH A 335 SITE 1 AC2 4 CYS B 75 CYS B 80 CYS B 95 HOH B 318 SITE 1 AC3 11 ASP A 50 GLN A 51 THR A 52 GLU A 54 SITE 2 AC3 11 GLN A 56 TYR B 42 ASP B 50 GLN B 51 SITE 3 AC3 11 THR B 52 GLU B 54 HOH B 315 CRYST1 39.854 63.090 67.526 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025092 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015850 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014809 0.00000 MASTER 400 0 5 2 14 0 5 6 0 0 0 16 END