HEADER SIGNALING PROTEIN 15-FEB-12 4DQD TITLE THE CRYSTAL STRUCTURE OF A TRANSPORTER IN COMPLEX WITH 3-PHENYLPYRUVIC TITLE 2 ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTRACELLULAR LIGAND-BINDING RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOPSEUDOMONAS PALUSTRIS; SOURCE 3 ORGANISM_TAXID: 316058; SOURCE 4 STRAIN: HAA2; SOURCE 5 GENE: RPB_4630 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GE NOMICS, MCSG, MIDWEST CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,J.C.MACK,S.ZERBS,F.COLLART,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 3 25-SEP-13 4DQD 1 JRNL REVDAT 2 15-MAY-13 4DQD 1 JRNL REVDAT 1 29-FEB-12 4DQD 0 JRNL AUTH K.TAN,C.CHANG,M.CUFF,J.OSIPIUK,E.LANDORF,J.C.MACK,S.ZERBS, JRNL AUTH 2 A.JOACHIMIAK,F.R.COLLART JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF SOLUTE BINDING JRNL TITL 2 PROTEINS FOR AROMATIC COMPOUNDS DERIVED FROM LIGNIN: JRNL TITL 3 P-COUMARIC ACID AND RELATED AROMATIC ACIDS. JRNL REF PROTEINS V. 81 1709 2013 JRNL REFN ISSN 0887-3585 JRNL PMID 23606130 JRNL DOI 10.1002/PROT.24305 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 56150 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.143 REMARK 3 FREE R VALUE : 0.162 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2848 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.9736 - 4.3390 0.99 2708 149 0.1553 0.1560 REMARK 3 2 4.3390 - 3.4465 1.00 2720 146 0.1314 0.1519 REMARK 3 3 3.4465 - 3.0116 1.00 2681 153 0.1426 0.1506 REMARK 3 4 3.0116 - 2.7366 1.00 2678 142 0.1448 0.1746 REMARK 3 5 2.7366 - 2.5406 1.00 2691 147 0.1475 0.1616 REMARK 3 6 2.5406 - 2.3909 1.00 2646 144 0.1376 0.1561 REMARK 3 7 2.3909 - 2.2713 1.00 2699 144 0.1355 0.1580 REMARK 3 8 2.2713 - 2.1724 1.00 2643 145 0.1291 0.1458 REMARK 3 9 2.1724 - 2.0889 1.00 2704 134 0.1294 0.1566 REMARK 3 10 2.0889 - 2.0168 1.00 2654 137 0.1309 0.1523 REMARK 3 11 2.0168 - 1.9538 1.00 2645 132 0.1279 0.1655 REMARK 3 12 1.9538 - 1.8979 1.00 2687 154 0.1326 0.1622 REMARK 3 13 1.8979 - 1.8480 1.00 2647 141 0.1386 0.1737 REMARK 3 14 1.8480 - 1.8029 1.00 2717 109 0.1418 0.1919 REMARK 3 15 1.8029 - 1.7619 1.00 2626 147 0.1477 0.1738 REMARK 3 16 1.7619 - 1.7244 1.00 2671 154 0.1536 0.2058 REMARK 3 17 1.7244 - 1.6900 1.00 2616 152 0.1622 0.1813 REMARK 3 18 1.6900 - 1.6581 1.00 2673 134 0.1752 0.1872 REMARK 3 19 1.6581 - 1.6285 1.00 2661 149 0.1843 0.2116 REMARK 3 20 1.6285 - 1.6009 0.96 2535 135 0.2107 0.2413 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 60.38 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.76190 REMARK 3 B22 (A**2) : 6.17910 REMARK 3 B33 (A**2) : -3.41720 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.13120 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2867 REMARK 3 ANGLE : 1.099 3877 REMARK 3 CHIRALITY : 0.075 431 REMARK 3 PLANARITY : 0.005 506 REMARK 3 DIHEDRAL : 14.289 1100 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: chain 'A' and (resseq 23:83) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8127 6.2649 33.6179 REMARK 3 T TENSOR REMARK 3 T11: 0.1593 T22: 0.1581 REMARK 3 T33: 0.1537 T12: 0.0001 REMARK 3 T13: 0.0052 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 1.9063 L22: 1.0803 REMARK 3 L33: 0.9331 L12: 0.5784 REMARK 3 L13: 0.0406 L23: 0.0686 REMARK 3 S TENSOR REMARK 3 S11: 0.0935 S12: -0.2802 S13: 0.1310 REMARK 3 S21: 0.1149 S22: -0.0625 S23: 0.0864 REMARK 3 S31: -0.1171 S32: -0.0602 S33: -0.0386 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: chain 'A' and (resseq 84:139) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0924 -6.1995 31.2579 REMARK 3 T TENSOR REMARK 3 T11: 0.1594 T22: 0.1400 REMARK 3 T33: 0.1448 T12: 0.0088 REMARK 3 T13: -0.0165 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 1.2238 L22: 1.0681 REMARK 3 L33: 0.7104 L12: 0.4341 REMARK 3 L13: -0.3012 L23: -0.2970 REMARK 3 S TENSOR REMARK 3 S11: 0.0399 S12: -0.1846 S13: -0.0552 REMARK 3 S21: 0.1307 S22: -0.0419 S23: -0.0663 REMARK 3 S31: 0.0738 S32: 0.0746 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: chain 'A' and (resseq 140:220) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6460 -3.3335 9.3676 REMARK 3 T TENSOR REMARK 3 T11: 0.1615 T22: 0.1969 REMARK 3 T33: 0.1611 T12: 0.0052 REMARK 3 T13: 0.0181 T23: -0.0350 REMARK 3 L TENSOR REMARK 3 L11: 1.4832 L22: 0.9136 REMARK 3 L33: 1.1592 L12: 0.1147 REMARK 3 L13: -0.1155 L23: 0.0502 REMARK 3 S TENSOR REMARK 3 S11: -0.0723 S12: 0.1999 S13: -0.1636 REMARK 3 S21: -0.1057 S22: 0.0889 S23: -0.1017 REMARK 3 S31: 0.1020 S32: 0.1741 S33: -0.0206 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: chain 'A' and (resseq 221:279) REMARK 3 ORIGIN FOR THE GROUP (A): 16.8119 7.6715 7.4650 REMARK 3 T TENSOR REMARK 3 T11: 0.1879 T22: 0.1827 REMARK 3 T33: 0.1605 T12: -0.0305 REMARK 3 T13: -0.0108 T23: 0.0312 REMARK 3 L TENSOR REMARK 3 L11: 1.7867 L22: 0.5432 REMARK 3 L33: 0.8639 L12: 0.0002 REMARK 3 L13: 0.0826 L23: 0.0170 REMARK 3 S TENSOR REMARK 3 S11: -0.1056 S12: 0.3375 S13: 0.2848 REMARK 3 S21: -0.1121 S22: 0.1051 S23: -0.0090 REMARK 3 S31: -0.1547 S32: 0.0269 S33: -0.0048 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: chain 'A' and (resseq 280:365) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8442 -2.9109 24.4469 REMARK 3 T TENSOR REMARK 3 T11: 0.1318 T22: 0.1443 REMARK 3 T33: 0.1652 T12: 0.0085 REMARK 3 T13: -0.0016 T23: -0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.9181 L22: 0.8339 REMARK 3 L33: 1.1990 L12: 0.4064 REMARK 3 L13: -0.0830 L23: -0.1408 REMARK 3 S TENSOR REMARK 3 S11: 0.0089 S12: -0.0234 S13: 0.0239 REMARK 3 S21: 0.0062 S22: 0.0396 S23: 0.1395 REMARK 3 S31: 0.0485 S32: -0.1811 S33: -0.0485 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: chain 'A' and (resseq 366:383) REMARK 3 ORIGIN FOR THE GROUP (A): 9.1905 0.7421 3.9578 REMARK 3 T TENSOR REMARK 3 T11: 0.1985 T22: 0.2422 REMARK 3 T33: 0.1349 T12: -0.0293 REMARK 3 T13: -0.0283 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 3.0580 L22: 3.8241 REMARK 3 L33: 2.5975 L12: 0.4289 REMARK 3 L13: -0.2526 L23: -0.5072 REMARK 3 S TENSOR REMARK 3 S11: -0.1763 S12: 0.6022 S13: 0.0096 REMARK 3 S21: -0.4290 S22: 0.1373 S23: 0.1156 REMARK 3 S31: 0.2472 S32: -0.0531 S33: 0.0282 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DQD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-FEB-12. REMARK 100 THE RCSB ID CODE IS RCSB070651. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56211 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 26.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.57300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3SG0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M TRIMETHYLAMINE N-OXIDE, 0.1M REMARK 280 TRIS:HCL, 20% (W/V) PEG MME 2000, PH 8.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 62.51900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.21100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 62.51900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.21100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: EXPERIMENTALLY UNKNOWN. IT IS PREDICTED TO BE MONOMERIC. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 679 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 21 REMARK 465 ASN A 22 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 93 -156.53 -90.33 REMARK 500 GLN A 242 -161.69 -121.13 REMARK 500 ALA A 247 29.46 -75.63 REMARK 500 ASN A 362 -61.54 -102.69 REMARK 500 ASP A 365 -168.02 -126.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PPY A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3PY A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 406 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC102212 RELATED DB: TARGETTRACK DBREF 4DQD A 23 383 UNP Q2IR47 Q2IR47_RHOP2 23 383 SEQADV 4DQD SER A 21 UNP Q2IR47 EXPRESSION TAG SEQADV 4DQD ASN A 22 UNP Q2IR47 EXPRESSION TAG SEQRES 1 A 363 SER ASN ALA GLU ILE LYS ILE GLY ILE THR MSE SER ALA SEQRES 2 A 363 SER GLY PRO GLY ALA ALA LEU GLY GLN PRO GLN SER LYS SEQRES 3 A 363 THR VAL ALA ALA LEU PRO LYS GLU ILE GLY GLY GLU LYS SEQRES 4 A 363 VAL THR TYR PHE ALA LEU ASP ASP GLU SER ASP PRO THR SEQRES 5 A 363 LYS ALA ALA GLN ASN ALA ARG LYS LEU LEU SER GLU GLU SEQRES 6 A 363 LYS VAL ASP VAL LEU ILE GLY SER SER LEU THR PRO VAL SEQRES 7 A 363 SER LEU PRO LEU ILE ASP ILE ALA ALA GLU ALA LYS THR SEQRES 8 A 363 PRO LEU MSE THR MSE ALA ALA ALA ALA ILE LEU VAL ALA SEQRES 9 A 363 PRO MSE ASP GLU ARG ARG LYS TRP VAL TYR LYS VAL VAL SEQRES 10 A 363 PRO ASN ASP ASP ILE MSE ALA GLU ALA ILE GLY LYS TYR SEQRES 11 A 363 ILE ALA LYS THR GLY ALA LYS LYS VAL GLY TYR ILE GLY SEQRES 12 A 363 PHE SER ASP ALA TYR GLY GLU GLY TYR TYR LYS VAL LEU SEQRES 13 A 363 ALA ALA ALA ALA PRO LYS LEU GLY PHE GLU LEU THR THR SEQRES 14 A 363 HIS GLU VAL TYR ALA ARG SER ASP ALA SER VAL THR GLY SEQRES 15 A 363 GLN VAL LEU LYS ILE ILE ALA THR LYS PRO ASP ALA VAL SEQRES 16 A 363 PHE ILE ALA SER ALA GLY THR PRO ALA VAL LEU PRO GLN SEQRES 17 A 363 LYS ALA LEU ARG GLU ARG GLY PHE LYS GLY ALA ILE TYR SEQRES 18 A 363 GLN THR HIS GLY VAL ALA THR GLU GLU PHE ILE LYS LEU SEQRES 19 A 363 GLY GLY LYS ASP VAL GLU GLY ALA ILE PHE ALA GLY GLU SEQRES 20 A 363 ALA PHE SER GLY ALA GLU ASP MSE PRO ALA ASP SER PRO SEQRES 21 A 363 PHE ARG LYS VAL LYS ALA ARG PHE VAL ASP ALA TYR LYS SEQRES 22 A 363 ALA ALA ASN GLY GLY ALA ALA PRO THR ILE PHE GLY VAL SEQRES 23 A 363 HIS LEU TRP ASP SER MSE THR LEU VAL GLU ASN ALA ILE SEQRES 24 A 363 PRO ALA ALA LEU LYS ALA ALA LYS PRO GLY THR PRO GLU SEQRES 25 A 363 PHE ARG ALA ALA ILE ARG ASP GLN ILE GLU LYS SER LYS SEQRES 26 A 363 ASP LEU ALA LEU ASN ASN GLY LEU SER ASN MSE THR PRO SEQRES 27 A 363 ASP ASN HIS ASN GLY TYR ASP GLU ARG SER ALA PHE LEU SEQRES 28 A 363 ILE GLU ILE ARG ASP GLY ALA PHE ARG LEU LYS GLN MODRES 4DQD MSE A 31 MET SELENOMETHIONINE MODRES 4DQD MSE A 114 MET SELENOMETHIONINE MODRES 4DQD MSE A 116 MET SELENOMETHIONINE MODRES 4DQD MSE A 126 MET SELENOMETHIONINE MODRES 4DQD MSE A 143 MET SELENOMETHIONINE MODRES 4DQD MSE A 275 MET SELENOMETHIONINE MODRES 4DQD MSE A 312 MET SELENOMETHIONINE MODRES 4DQD MSE A 356 MET SELENOMETHIONINE HET MSE A 31 8 HET MSE A 114 8 HET MSE A 116 8 HET MSE A 126 8 HET MSE A 143 8 HET MSE A 275 8 HET MSE A 312 8 HET MSE A 356 8 HET PPY A 401 12 HET GOL A 402 6 HET GOL A 403 6 HET 3PY A 404 7 HET PG4 A 405 13 HET PG4 A 406 13 HETNAM MSE SELENOMETHIONINE HETNAM PPY 3-PHENYLPYRUVIC ACID HETNAM GOL GLYCEROL HETNAM 3PY 3-HYDROXYPYRUVIC ACID HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 PPY C9 H8 O3 FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 3PY C3 H4 O4 FORMUL 6 PG4 2(C8 H18 O5) FORMUL 8 HOH *340(H2 O) HELIX 1 1 GLY A 37 VAL A 48 1 12 HELIX 2 2 ALA A 49 LEU A 51 5 3 HELIX 3 3 ASP A 70 GLU A 84 1 15 HELIX 4 4 LEU A 95 LEU A 100 1 6 HELIX 5 5 PRO A 101 ALA A 109 1 9 HELIX 6 6 ALA A 119 VAL A 123 5 5 HELIX 7 7 ARG A 129 LYS A 131 5 3 HELIX 8 8 ASN A 139 THR A 154 1 16 HELIX 9 9 ASP A 166 GLY A 184 1 19 HELIX 10 10 VAL A 200 THR A 210 1 11 HELIX 11 11 GLY A 221 PRO A 223 5 3 HELIX 12 12 ALA A 224 ARG A 234 1 11 HELIX 13 13 THR A 243 ALA A 247 5 5 HELIX 14 14 THR A 248 GLY A 256 1 9 HELIX 15 15 LYS A 257 GLU A 260 5 4 HELIX 16 16 GLU A 267 ALA A 272 1 6 HELIX 17 17 GLU A 273 MSE A 275 5 3 HELIX 18 18 SER A 279 ASN A 296 1 18 HELIX 19 19 ILE A 303 ALA A 326 1 24 HELIX 20 20 THR A 330 GLU A 342 1 13 HELIX 21 21 ASP A 365 ALA A 369 5 5 SHEET 1 A 6 GLU A 54 ILE A 55 0 SHEET 2 A 6 GLU A 58 ASP A 66 -1 O GLU A 58 N ILE A 55 SHEET 3 A 6 ILE A 25 MSE A 31 1 N ILE A 29 O PHE A 63 SHEET 4 A 6 VAL A 89 ILE A 91 1 O VAL A 89 N GLY A 28 SHEET 5 A 6 LEU A 113 THR A 115 1 O MSE A 114 N LEU A 90 SHEET 6 A 6 VAL A 133 LYS A 135 1 O TYR A 134 N LEU A 113 SHEET 1 B 3 GLU A 186 LEU A 187 0 SHEET 2 B 3 LYS A 158 PHE A 164 1 N VAL A 159 O GLU A 186 SHEET 3 B 3 GLU A 191 TYR A 193 1 O GLU A 191 N TYR A 161 SHEET 1 C 4 GLU A 186 LEU A 187 0 SHEET 2 C 4 LYS A 158 PHE A 164 1 N VAL A 159 O GLU A 186 SHEET 3 C 4 ALA A 214 ALA A 218 1 O PHE A 216 N GLY A 160 SHEET 4 C 4 ALA A 239 TYR A 241 1 O TYR A 241 N VAL A 215 SHEET 1 D 3 ILE A 263 GLY A 266 0 SHEET 2 D 3 PHE A 370 ARG A 375 -1 O PHE A 370 N GLY A 266 SHEET 3 D 3 ALA A 378 LEU A 381 -1 O ALA A 378 N ARG A 375 SHEET 1 E 2 LEU A 347 LEU A 349 0 SHEET 2 E 2 GLY A 352 SER A 354 -1 O SER A 354 N LEU A 347 LINK C THR A 30 N MSE A 31 1555 1555 1.33 LINK C MSE A 31 N SER A 32 1555 1555 1.33 LINK C LEU A 113 N MSE A 114 1555 1555 1.33 LINK C MSE A 114 N THR A 115 1555 1555 1.33 LINK C THR A 115 N MSE A 116 1555 1555 1.33 LINK C MSE A 116 N ALA A 117 1555 1555 1.33 LINK C PRO A 125 N MSE A 126 1555 1555 1.33 LINK C MSE A 126 N ASP A 127 1555 1555 1.33 LINK C ILE A 142 N MSE A 143 1555 1555 1.33 LINK C MSE A 143 N ALA A 144 1555 1555 1.33 LINK C ASP A 274 N MSE A 275 1555 1555 1.33 LINK C MSE A 275 N PRO A 276 1555 1555 1.34 LINK C SER A 311 N MSE A 312 1555 1555 1.33 LINK C MSE A 312 N THR A 313 1555 1555 1.33 LINK C ASN A 355 N MSE A 356 1555 1555 1.33 LINK C MSE A 356 N THR A 357 1555 1555 1.33 CISPEP 1 GLY A 92 SER A 93 0 -11.95 CISPEP 2 ALA A 124 PRO A 125 0 -5.26 SITE 1 AC1 15 LEU A 40 SER A 94 LEU A 95 THR A 96 SITE 2 AC1 15 PRO A 97 MSE A 116 ALA A 117 ALA A 118 SITE 3 AC1 15 VAL A 137 TYR A 168 ARG A 195 ALA A 220 SITE 4 AC1 15 HIS A 244 GLY A 245 HIS A 307 SITE 1 AC2 4 ALA A 38 GLN A 42 ARG A 129 GLU A 250 SITE 1 AC3 5 GLU A 191 GLY A 202 GLN A 203 LYS A 206 SITE 2 AC3 5 HOH A 652 SITE 1 AC4 7 PRO A 52 ARG A 287 TRP A 309 MSE A 312 SITE 2 AC4 7 THR A 313 GLU A 316 HOH A 735 SITE 1 AC5 6 GLU A 249 GLU A 250 ALA A 300 PRO A 301 SITE 2 AC5 6 THR A 302 HOH A 723 SITE 1 AC6 4 SER A 165 ASP A 166 ALA A 167 GLU A 170 CRYST1 125.038 62.422 60.623 90.00 113.67 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007998 0.000000 0.003507 0.00000 SCALE2 0.000000 0.016020 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018011 0.00000 MASTER 368 0 14 21 18 0 12 6 0 0 0 28 END