HEADER TRANSPORT PROTEIN 08-FEB-12 4DN7 TITLE CRYSTAL STRUCTURE OF PUTATIVE ABC TRANSPORTER, ATP-BINDING PROTEIN TITLE 2 FROM METHANOSARCINA MAZEI GO1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ABC TRANSPORTER, ATP-BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOSARCINA MAZE; SOURCE 3 ORGANISM_TAXID: 192952; SOURCE 4 STRAIN: GO1; SOURCE 5 GENE: MM_1088; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)CODON+RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BC-PSGX3(BC) KEYWDS STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, NEW YORK KEYWDS 2 STRUCTURAL GENOMIX RESEARCH CONSORTIUM, NYSGRC, PSI-BIOLOGY, NEW KEYWDS 3 YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.N.MALASHKEVICH,R.BHOSLE,R.TORO,R.SEIDEL,S.C.ALMO,NEW YORK AUTHOR 2 STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 1 22-FEB-12 4DN7 0 JRNL AUTH V.N.MALASHKEVICH,R.BHOSLE,R.TORO,R.SEIDEL,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE ABC TRANSPORTER, ATP-BINDING JRNL TITL 2 PROTEIN FROM METHANOSARCINA MAZEI GO1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.56 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.8 REMARK 3 NUMBER OF REFLECTIONS : 100625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5014 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7231 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.51 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 372 REMARK 3 BIN FREE R VALUE : 0.3380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6213 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 511 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.05000 REMARK 3 B13 (A**2) : -0.04000 REMARK 3 B23 (A**2) : 0.09000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.125 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.105 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.799 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6378 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8599 ; 1.319 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 826 ; 5.671 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 258 ;37.468 ;25.426 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1150 ;13.824 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ; 9.842 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 999 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4628 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 6378 ; 2.964 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 191 ;25.116 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 6610 ;14.739 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 30.6677 4.2665 11.5810 REMARK 3 T TENSOR REMARK 3 T11: 0.0176 T22: 0.0197 REMARK 3 T33: 0.0225 T12: -0.0109 REMARK 3 T13: 0.0070 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 0.3195 L22: 0.1780 REMARK 3 L33: 0.2577 L12: -0.0450 REMARK 3 L13: -0.0433 L23: 0.0488 REMARK 3 S TENSOR REMARK 3 S11: 0.0071 S12: -0.0578 S13: -0.0183 REMARK 3 S21: 0.0483 S22: -0.0089 S23: -0.0004 REMARK 3 S31: 0.0083 S32: 0.0219 S33: 0.0018 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 25.2765 8.8227 -31.8379 REMARK 3 T TENSOR REMARK 3 T11: 0.0200 T22: 0.0165 REMARK 3 T33: 0.0233 T12: -0.0059 REMARK 3 T13: 0.0057 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.2407 L22: 0.3802 REMARK 3 L33: 0.2954 L12: -0.0859 REMARK 3 L13: -0.0296 L23: -0.0385 REMARK 3 S TENSOR REMARK 3 S11: 0.0027 S12: 0.0490 S13: -0.0101 REMARK 3 S21: -0.0746 S22: -0.0107 S23: 0.0195 REMARK 3 S31: -0.0006 S32: -0.0095 S33: 0.0079 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 4DN7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-FEB-12. REMARK 100 THE RCSB ID CODE IS RCSB070539. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 101227 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.89500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA ACETATE, 0.1M MES:NAOH, PH REMARK 280 6.5, 30% PEG400, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MSE A 1 REMARK 465 MSE B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 SER B -14 REMARK 465 SER B -13 REMARK 465 GLY B -12 REMARK 465 VAL B -11 REMARK 465 ASP B -10 REMARK 465 LEU B -9 REMARK 465 GLY B -8 REMARK 465 THR B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 SER B 0 REMARK 465 MSE B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 320 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 75 -119.00 49.47 REMARK 500 LYS A 154 80.22 -156.17 REMARK 500 TRP A 210 -132.29 -101.99 REMARK 500 TYR A 246 67.88 -150.89 REMARK 500 ASP B 75 -116.77 49.22 REMARK 500 LYS B 154 76.24 -153.67 REMARK 500 TRP B 210 -129.80 -102.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 825 DISTANCE = 5.62 ANGSTROMS REMARK 525 HOH A 843 DISTANCE = 5.33 ANGSTROMS REMARK 525 HOH A 849 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH B 795 DISTANCE = 5.42 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE A 500 REMARK 610 1PE A 501 REMARK 610 1PE B 500 REMARK 610 1PE B 501 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-013885 RELATED DB: TARGETTRACK DBREF 4DN7 A 1 407 UNP Q8PXX8 Q8PXX8_METMA 1 407 DBREF 4DN7 B 1 407 UNP Q8PXX8 Q8PXX8_METMA 1 407 SEQADV 4DN7 MSE A -21 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS A -20 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS A -19 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS A -18 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS A -17 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS A -16 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS A -15 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 SER A -14 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 SER A -13 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLY A -12 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 VAL A -11 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 ASP A -10 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 LEU A -9 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLY A -8 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 THR A -7 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLU A -6 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 ASN A -5 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 LEU A -4 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 TYR A -3 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 PHE A -2 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLN A -1 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 SER A 0 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 MSE B -21 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS B -20 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS B -19 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS B -18 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS B -17 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS B -16 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 HIS B -15 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 SER B -14 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 SER B -13 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLY B -12 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 VAL B -11 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 ASP B -10 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 LEU B -9 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLY B -8 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 THR B -7 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLU B -6 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 ASN B -5 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 LEU B -4 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 TYR B -3 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 PHE B -2 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 GLN B -1 UNP Q8PXX8 EXPRESSION TAG SEQADV 4DN7 SER B 0 UNP Q8PXX8 EXPRESSION TAG SEQRES 1 A 429 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 429 GLY THR GLU ASN LEU TYR PHE GLN SER MSE GLN THR GLU SEQRES 3 A 429 GLN VAL SER LEU LYS LYS ARG ALA GLU SER ALA ALA GLU SEQRES 4 A 429 LYS LYS ALA ALA PHE GLY GLU ASP PHE GLU LEU GLU LYS SEQRES 5 A 429 TYR GLU GLU GLY SER LYS VAL SER LYS PRO ILE GLU ASP SEQRES 6 A 429 LEU GLN SER LEU ASP GLU GLU SER LYS LYS THR LEU LEU SEQRES 7 A 429 GLN VAL GLY VAL ILE PRO SER GLU GLU GLY ARG SER GLY SEQRES 8 A 429 SER PHE LEU VAL LEU ASP ASN ALA VAL SER HIS SER THR SEQRES 9 A 429 LEU LYS ASP LYS ASN VAL GLU LEU MSE SER THR HIS LYS SEQRES 10 A 429 ALA MSE GLU LYS TYR GLU TRP LEU LYS ASP TYR SER TRP SEQRES 11 A 429 LYS LEU VAL GLN VAL ASP ALA ASP LYS TYR THR ALA LYS SEQRES 12 A 429 THR TYR LEU GLU ASP ALA ASP GLY TYR PHE ILE ARG VAL SEQRES 13 A 429 PRO ALA GLY LYS LYS THR SER MSE PRO VAL GLN THR CYS SEQRES 14 A 429 LEU MSE LEU GLY SER LYS LYS ALA ALA GLN THR VAL HIS SEQRES 15 A 429 ASN ILE ILE ILE VAL GLU GLU GLY ALA THR LEU ASP ILE SEQRES 16 A 429 ILE THR GLY CYS THR THR LYS LYS GLY VAL GLU GLU GLY SEQRES 17 A 429 LEU HIS LEU GLY ILE SER GLU MSE TYR ILE LYS LYS GLY SEQRES 18 A 429 GLY THR LEU ASN PHE THR MSE ILE HIS ASN TRP ALA GLU SEQRES 19 A 429 GLN ILE GLY VAL ARG PRO ARG THR VAL VAL SER VAL GLU SEQRES 20 A 429 GLU GLY GLY THR TYR VAL SER ASN TYR ILE CYS LEU LYS SEQRES 21 A 429 PRO VAL ARG SER VAL GLN THR TYR PRO THR VAL ARG LEU SEQRES 22 A 429 GLU GLY GLU GLY ALA VAL THR ARG LEU ASN THR ILE ALA SEQRES 23 A 429 ILE ALA HIS PRO GLY SER GLU LEU ASP LEU GLY SER LYS SEQRES 24 A 429 ALA ILE PHE ASN ALA PRO GLY THR ARG ALA GLU LEU ILE SEQRES 25 A 429 SER ARG THR ILE THR ILE GLY GLY ARG LEU ILE ALA ARG SEQRES 26 A 429 GLY GLU MSE ILE GLY ASN ALA LYS GLY ALA LYS GLY HIS SEQRES 27 A 429 LEU GLU CYS LYS GLY LEU VAL LEU THR ASP LYS GLY SER SEQRES 28 A 429 GLN LEU ALA ILE PRO ILE LEU GLU ALA ASN VAL ASP ASP SEQRES 29 A 429 ILE GLU LEU THR HIS GLU ALA ALA VAL GLY LYS ILE ALA SEQRES 30 A 429 LYS ASP GLN VAL GLU TYR LEU MSE ALA ARG GLY LEU THR SEQRES 31 A 429 GLU ASP GLU ALA VAL GLY MSE ILE ILE ARG GLY PHE LEU SEQRES 32 A 429 ASP VAL GLY ILE ARG GLY ILE PRO GLU GLU LEU LYS GLU SEQRES 33 A 429 GLU ILE GLU ASN THR ILE ALA GLN THR ALA LEU GLY MSE SEQRES 1 B 429 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 429 GLY THR GLU ASN LEU TYR PHE GLN SER MSE GLN THR GLU SEQRES 3 B 429 GLN VAL SER LEU LYS LYS ARG ALA GLU SER ALA ALA GLU SEQRES 4 B 429 LYS LYS ALA ALA PHE GLY GLU ASP PHE GLU LEU GLU LYS SEQRES 5 B 429 TYR GLU GLU GLY SER LYS VAL SER LYS PRO ILE GLU ASP SEQRES 6 B 429 LEU GLN SER LEU ASP GLU GLU SER LYS LYS THR LEU LEU SEQRES 7 B 429 GLN VAL GLY VAL ILE PRO SER GLU GLU GLY ARG SER GLY SEQRES 8 B 429 SER PHE LEU VAL LEU ASP ASN ALA VAL SER HIS SER THR SEQRES 9 B 429 LEU LYS ASP LYS ASN VAL GLU LEU MSE SER THR HIS LYS SEQRES 10 B 429 ALA MSE GLU LYS TYR GLU TRP LEU LYS ASP TYR SER TRP SEQRES 11 B 429 LYS LEU VAL GLN VAL ASP ALA ASP LYS TYR THR ALA LYS SEQRES 12 B 429 THR TYR LEU GLU ASP ALA ASP GLY TYR PHE ILE ARG VAL SEQRES 13 B 429 PRO ALA GLY LYS LYS THR SER MSE PRO VAL GLN THR CYS SEQRES 14 B 429 LEU MSE LEU GLY SER LYS LYS ALA ALA GLN THR VAL HIS SEQRES 15 B 429 ASN ILE ILE ILE VAL GLU GLU GLY ALA THR LEU ASP ILE SEQRES 16 B 429 ILE THR GLY CYS THR THR LYS LYS GLY VAL GLU GLU GLY SEQRES 17 B 429 LEU HIS LEU GLY ILE SER GLU MSE TYR ILE LYS LYS GLY SEQRES 18 B 429 GLY THR LEU ASN PHE THR MSE ILE HIS ASN TRP ALA GLU SEQRES 19 B 429 GLN ILE GLY VAL ARG PRO ARG THR VAL VAL SER VAL GLU SEQRES 20 B 429 GLU GLY GLY THR TYR VAL SER ASN TYR ILE CYS LEU LYS SEQRES 21 B 429 PRO VAL ARG SER VAL GLN THR TYR PRO THR VAL ARG LEU SEQRES 22 B 429 GLU GLY GLU GLY ALA VAL THR ARG LEU ASN THR ILE ALA SEQRES 23 B 429 ILE ALA HIS PRO GLY SER GLU LEU ASP LEU GLY SER LYS SEQRES 24 B 429 ALA ILE PHE ASN ALA PRO GLY THR ARG ALA GLU LEU ILE SEQRES 25 B 429 SER ARG THR ILE THR ILE GLY GLY ARG LEU ILE ALA ARG SEQRES 26 B 429 GLY GLU MSE ILE GLY ASN ALA LYS GLY ALA LYS GLY HIS SEQRES 27 B 429 LEU GLU CYS LYS GLY LEU VAL LEU THR ASP LYS GLY SER SEQRES 28 B 429 GLN LEU ALA ILE PRO ILE LEU GLU ALA ASN VAL ASP ASP SEQRES 29 B 429 ILE GLU LEU THR HIS GLU ALA ALA VAL GLY LYS ILE ALA SEQRES 30 B 429 LYS ASP GLN VAL GLU TYR LEU MSE ALA ARG GLY LEU THR SEQRES 31 B 429 GLU ASP GLU ALA VAL GLY MSE ILE ILE ARG GLY PHE LEU SEQRES 32 B 429 ASP VAL GLY ILE ARG GLY ILE PRO GLU GLU LEU LYS GLU SEQRES 33 B 429 GLU ILE GLU ASN THR ILE ALA GLN THR ALA LEU GLY MSE MODRES 4DN7 MSE A 91 MET SELENOMETHIONINE MODRES 4DN7 MSE A 97 MET SELENOMETHIONINE MODRES 4DN7 MSE A 142 MET SELENOMETHIONINE MODRES 4DN7 MSE A 149 MET SELENOMETHIONINE MODRES 4DN7 MSE A 194 MET SELENOMETHIONINE MODRES 4DN7 MSE A 206 MET SELENOMETHIONINE MODRES 4DN7 MSE A 306 MET SELENOMETHIONINE MODRES 4DN7 MSE A 363 MET SELENOMETHIONINE MODRES 4DN7 MSE A 375 MET SELENOMETHIONINE MODRES 4DN7 MSE A 407 MET SELENOMETHIONINE MODRES 4DN7 MSE B 91 MET SELENOMETHIONINE MODRES 4DN7 MSE B 97 MET SELENOMETHIONINE MODRES 4DN7 MSE B 142 MET SELENOMETHIONINE MODRES 4DN7 MSE B 149 MET SELENOMETHIONINE MODRES 4DN7 MSE B 194 MET SELENOMETHIONINE MODRES 4DN7 MSE B 206 MET SELENOMETHIONINE MODRES 4DN7 MSE B 306 MET SELENOMETHIONINE MODRES 4DN7 MSE B 363 MET SELENOMETHIONINE MODRES 4DN7 MSE B 375 MET SELENOMETHIONINE MODRES 4DN7 MSE B 407 MET SELENOMETHIONINE HET MSE A 91 8 HET MSE A 97 8 HET MSE A 142 8 HET MSE A 149 8 HET MSE A 194 8 HET MSE A 206 8 HET MSE A 306 8 HET MSE A 363 8 HET MSE A 375 8 HET MSE A 407 9 HET MSE B 91 8 HET MSE B 97 8 HET MSE B 142 8 HET MSE B 149 8 HET MSE B 194 8 HET MSE B 206 8 HET MSE B 306 8 HET MSE B 363 8 HET MSE B 375 8 HET MSE B 407 9 HET 1PE A 500 8 HET 1PE A 501 14 HET 1PE B 500 8 HET 1PE B 501 8 HETNAM MSE SELENOMETHIONINE HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 1 MSE 20(C5 H11 N O2 SE) FORMUL 3 1PE 4(C10 H22 O6) FORMUL 7 HOH *511(H2 O) HELIX 1 1 GLN A 2 ALA A 15 1 14 HELIX 2 2 GLU A 27 TYR A 31 5 5 HELIX 3 3 ASP A 43 LEU A 47 5 5 HELIX 4 4 ASP A 48 VAL A 58 1 11 HELIX 5 5 THR A 93 TYR A 100 1 8 HELIX 6 6 GLU A 101 TYR A 106 5 6 HELIX 7 7 ASP A 116 GLU A 125 1 10 HELIX 8 8 ALA A 355 ARG A 365 1 11 HELIX 9 9 THR A 368 VAL A 383 1 16 HELIX 10 10 GLY A 384 ARG A 386 5 3 HELIX 11 11 PRO A 389 GLU A 391 5 3 HELIX 12 12 LEU A 392 GLY A 406 1 15 HELIX 13 13 THR B 3 ALA B 15 1 13 HELIX 14 14 GLU B 27 TYR B 31 5 5 HELIX 15 15 ASP B 43 LEU B 47 5 5 HELIX 16 16 ASP B 48 VAL B 58 1 11 HELIX 17 17 THR B 93 TYR B 100 1 8 HELIX 18 18 GLU B 101 TYR B 106 5 6 HELIX 19 19 ASP B 116 GLU B 125 1 10 HELIX 20 20 ALA B 355 ARG B 365 1 11 HELIX 21 21 THR B 368 VAL B 383 1 16 HELIX 22 22 GLY B 384 ARG B 386 5 3 HELIX 23 23 PRO B 389 GLU B 391 5 3 HELIX 24 24 LEU B 392 GLY B 406 1 15 LINK C LEU A 90 N MSE A 91 1555 1555 1.33 LINK C MSE A 91 N SER A 92 1555 1555 1.33 LINK C ALA A 96 N MSE A 97 1555 1555 1.33 LINK C MSE A 97 N GLU A 98 1555 1555 1.33 LINK C SER A 141 N MSE A 142 1555 1555 1.34 LINK C MSE A 142 N PRO A 143 1555 1555 1.35 LINK C LEU A 148 N MSE A 149 1555 1555 1.32 LINK C MSE A 149 N LEU A 150 1555 1555 1.33 LINK C GLU A 193 N MSE A 194 1555 1555 1.33 LINK C MSE A 194 N TYR A 195 1555 1555 1.34 LINK C THR A 205 N MSE A 206 1555 1555 1.33 LINK C MSE A 206 N ILE A 207 1555 1555 1.33 LINK C GLU A 305 N MSE A 306 1555 1555 1.34 LINK C MSE A 306 N ILE A 307 1555 1555 1.33 LINK C LEU A 362 N MSE A 363 1555 1555 1.34 LINK C MSE A 363 N ALA A 364 1555 1555 1.33 LINK C GLY A 374 N MSE A 375 1555 1555 1.34 LINK C MSE A 375 N ILE A 376 1555 1555 1.33 LINK C GLY A 406 N MSE A 407 1555 1555 1.33 LINK C LEU B 90 N MSE B 91 1555 1555 1.33 LINK C MSE B 91 N SER B 92 1555 1555 1.33 LINK C ALA B 96 N MSE B 97 1555 1555 1.34 LINK C MSE B 97 N GLU B 98 1555 1555 1.33 LINK C SER B 141 N MSE B 142 1555 1555 1.34 LINK C MSE B 142 N PRO B 143 1555 1555 1.35 LINK C LEU B 148 N MSE B 149 1555 1555 1.33 LINK C MSE B 149 N LEU B 150 1555 1555 1.33 LINK C GLU B 193 N MSE B 194 1555 1555 1.33 LINK C MSE B 194 N TYR B 195 1555 1555 1.34 LINK C THR B 205 N MSE B 206 1555 1555 1.33 LINK C MSE B 206 N ILE B 207 1555 1555 1.33 LINK C GLU B 305 N MSE B 306 1555 1555 1.34 LINK C MSE B 306 N ILE B 307 1555 1555 1.34 LINK C LEU B 362 N MSE B 363 1555 1555 1.34 LINK C MSE B 363 N ALA B 364 1555 1555 1.34 LINK C GLY B 374 N MSE B 375 1555 1555 1.33 LINK C MSE B 375 N ILE B 376 1555 1555 1.33 LINK C GLY B 406 N MSE B 407 1555 1555 1.33 SITE 1 AC1 6 ASP A 105 TYR A 106 TYR A 195 HOH A 607 SITE 2 AC1 6 HOH A 788 HOH A 801 SITE 1 AC2 10 LYS A 320 LEU A 322 ALA A 350 VAL A 351 SITE 2 AC2 10 LYS A 353 PHE A 380 HOH A 650 HOH A 763 SITE 3 AC2 10 HOH A 868 THR B 346 SITE 1 AC3 4 ASP B 105 TYR B 106 TYR B 195 HOH B 835 SITE 1 AC4 4 ALA B 350 VAL B 351 GLY B 352 HOH B 802 CRYST1 52.913 52.879 88.142 106.51 97.43 105.91 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018899 0.005386 0.004531 0.00000 SCALE2 0.000000 0.019664 0.006995 0.00000 SCALE3 0.000000 0.000000 0.012144 0.00000 MASTER 388 0 24 24 0 0 7 6 0 0 0 66 END