HEADER TRANSPORT PROTEIN/SIGNALING PROTEIN 17-JAN-12 4DCK TITLE CRYSTAL STRUCTURE OF THE C-TERMINUS OF VOLTAGE-GATED SODIUM CHANNEL IN TITLE 2 COMPLEX WITH FGF13 AND CAM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SODIUM CHANNEL PROTEIN TYPE 5 SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN OF NAV1.5; COMPND 5 SYNONYM: HH1, SODIUM CHANNEL PROTEIN CARDIAC MUSCLE SUBUNIT ALPHA, COMPND 6 SODIUM CHANNEL PROTEIN TYPE V SUBUNIT ALPHA, VOLTAGE-GATED SODIUM COMPND 7 CHANNEL SUBUNIT ALPHA NAV1.5; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: CALMODULIN; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: CALMODULIN; COMPND 13 SYNONYM: CAM; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: FIBROBLAST GROWTH FACTOR 13; COMPND 17 CHAIN: C; COMPND 18 FRAGMENT: FGF13; COMPND 19 SYNONYM: FGF-13, FIBROBLAST GROWTH FACTOR HOMOLOGOUS FACTOR 2, FHF-2; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SCN5A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: CALM1, CALM, CAM, CAM1, CALM2, CAM2, CAMB, CALM3, CALML2, SOURCE 13 CAM3, CAMC, CAMIII; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 MOL_ID: 3; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606; SOURCE 20 GENE: FGF13, FHF2; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 23 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS IQ-MOTIF, EF-HAND, VOLTAGE-GATED SODIUM CHANNEL REGULATION, NAV1.5 KEYWDS 2 CTD BINDS TO FGF13 AND CAM. CAM BINDS TO CA2+., TRANSPORT PROTEIN- KEYWDS 3 TRANSPORT PROTEIN REGULATOR-SIGNALING PROTEIN COMPLEX, TRANSPORT KEYWDS 4 PROTEIN-SIGNALING PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR B.C.CHUNG,C.WANG,H.YAN,G.S.PITT,S.Y.LEE REVDAT 2 25-JUL-12 4DCK 1 JRNL REVDAT 1 27-JUN-12 4DCK 0 JRNL AUTH C.WANG,B.C.CHUNG,H.YAN,S.Y.LEE,G.S.PITT JRNL TITL CRYSTAL STRUCTURE OF THE TERNARY COMPLEX OF A NAV C-TERMINAL JRNL TITL 2 DOMAIN, A FIBROBLAST GROWTH FACTOR HOMOLOGOUS FACTOR, AND JRNL TITL 3 CALMODULIN. JRNL REF STRUCTURE V. 20 1167 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22705208 JRNL DOI 10.1016/J.STR.2012.05.001 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.440 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1701 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.8642 - 5.0339 1.00 2818 150 0.1995 0.2176 REMARK 3 2 5.0339 - 3.9967 1.00 2746 140 0.1724 0.1802 REMARK 3 3 3.9967 - 3.4919 1.00 2705 143 0.1986 0.2066 REMARK 3 4 3.4919 - 3.1727 1.00 2701 143 0.2166 0.2520 REMARK 3 5 3.1727 - 2.9454 1.00 2692 139 0.2352 0.2451 REMARK 3 6 2.9454 - 2.7718 1.00 2679 143 0.2356 0.2410 REMARK 3 7 2.7718 - 2.6330 1.00 2673 138 0.2391 0.2636 REMARK 3 8 2.6330 - 2.5184 1.00 2665 144 0.2410 0.3109 REMARK 3 9 2.5184 - 2.4215 1.00 2693 140 0.2322 0.2558 REMARK 3 10 2.4215 - 2.3379 1.00 2657 140 0.2349 0.2518 REMARK 3 11 2.3379 - 2.2648 1.00 2656 141 0.2455 0.2844 REMARK 3 12 2.2648 - 2.2001 0.99 2641 140 0.2625 0.2638 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 43.58 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.650 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.00000 REMARK 3 B22 (A**2) : -0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 3563 REMARK 3 ANGLE : 0.823 4798 REMARK 3 CHIRALITY : 0.056 521 REMARK 3 PLANARITY : 0.004 622 REMARK 3 DIHEDRAL : 14.486 1343 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4DCK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JAN-12. REMARK 100 THE RCSB ID CODE IS RCSB070158. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-11; 22-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 22-ID; 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1; 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI 111; DOUBLE REMARK 200 CRYSTAL, SI 111 REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD; ADSC REMARK 200 QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33622 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 39.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX (PHENIX.REFLECTION_FILE_EDITOR: 1.7.1_743) REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG400, 150MM MAGNESIUM ACETATE, REMARK 280 50MM SODIUM CACODYLATE , PH 6.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 63.02050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.02050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.02050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.02050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 63.02050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 63.02050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 63.02050 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 63.02050 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 63.02050 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 63.02050 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 63.02050 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 63.02050 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 63.02050 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 63.02050 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 63.02050 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 63.02050 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 63.02050 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 63.02050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE C-TERMINUS OF VOLTAGE-GATED SODIUM CHANNEL IS A MONOMER REMARK 300 AND IN COMPLEX WITH FGF13 AND CAM. SO IT IS HETEROTRIMER (TERNARY REMARK 300 COMPLEX). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: NONAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 60420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -178.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 -63.02050 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 -63.02050 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 63.02050 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 -63.02050 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 362 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 1773 REMARK 465 ASN A 1774 REMARK 465 PHE A 1775 REMARK 465 ARG A 1929 REMARK 465 GLN A 1930 REMARK 465 GLN A 1931 REMARK 465 ALA A 1932 REMARK 465 GLY A 1933 REMARK 465 SER A 1934 REMARK 465 GLY A 1935 REMARK 465 LEU A 1936 REMARK 465 SER A 1937 REMARK 465 GLU A 1938 REMARK 465 GLU A 1939 REMARK 465 ASP A 1940 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ASP B 3 REMARK 465 GLN B 4 REMARK 465 LYS B 22 REMARK 465 ASP B 23 REMARK 465 GLY B 24 REMARK 465 ASP B 25 REMARK 465 GLY B 26 REMARK 465 THR B 27 REMARK 465 ASP B 57 REMARK 465 ALA B 58 REMARK 465 ASP B 59 REMARK 465 GLY B 60 REMARK 465 ASN B 61 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 LEU C 3 REMARK 465 LEU C 4 REMARK 465 ARG C 5 REMARK 465 LYS C 6 REMARK 465 SER C 7 REMARK 465 TYR C 8 REMARK 465 SER C 9 REMARK 465 GLU C 10 REMARK 465 LEU C 159 REMARK 465 THR C 160 REMARK 465 GLU C 161 REMARK 465 PHE C 162 REMARK 465 SER C 163 REMARK 465 ARG C 164 REMARK 465 SER C 165 REMARK 465 GLY C 166 REMARK 465 SER C 167 REMARK 465 GLY C 168 REMARK 465 THR C 169 REMARK 465 PRO C 170 REMARK 465 THR C 171 REMARK 465 LYS C 172 REMARK 465 SER C 173 REMARK 465 ARG C 174 REMARK 465 SER C 175 REMARK 465 VAL C 176 REMARK 465 SER C 177 REMARK 465 GLY C 178 REMARK 465 VAL C 179 REMARK 465 LEU C 180 REMARK 465 ASN C 181 REMARK 465 GLY C 182 REMARK 465 GLY C 183 REMARK 465 LYS C 184 REMARK 465 SER C 185 REMARK 465 MET C 186 REMARK 465 SER C 187 REMARK 465 HIS C 188 REMARK 465 ASN C 189 REMARK 465 GLU C 190 REMARK 465 SER C 191 REMARK 465 THR C 192 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE B 28 CG1 CG2 CD1 REMARK 470 THR B 29 OG1 CG2 REMARK 470 THR B 30 OG1 CG2 REMARK 470 LYS B 31 CG CD CE NZ REMARK 470 THR B 63 OG1 CG2 REMARK 470 LYS B 149 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR C 79 OE1 GLU C 87 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A1807 3.08 85.51 REMARK 500 GLU B 55 1.29 -61.28 REMARK 500 PHE B 66 -71.63 -47.95 REMARK 500 THR C 47 2.48 -55.60 REMARK 500 GLN C 111 -51.69 72.43 REMARK 500 HIS C 157 -166.21 -114.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 96 OD1 REMARK 620 2 ASN B 98 OD1 82.5 REMARK 620 3 ASP B 94 OD1 68.3 80.2 REMARK 620 4 TYR B 100 O 146.7 89.3 78.5 REMARK 620 5 ASP B 96 OD2 55.3 95.7 123.4 158.1 REMARK 620 6 HOH B 339 O 118.0 93.5 170.7 94.6 63.8 REMARK 620 7 HOH B 306 O 99.9 169.4 91.0 83.1 94.1 94.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 130 OD1 REMARK 620 2 ASP B 132 OD1 82.0 REMARK 620 3 ASP B 134 OD1 85.4 89.7 REMARK 620 4 GLN B 136 O 83.4 165.4 90.6 REMARK 620 5 HOH B 304 O 96.1 89.7 178.3 90.3 REMARK 620 6 HOH B 309 O 164.7 109.7 85.0 84.9 93.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 132 OD2 REMARK 620 2 HOH B 358 O 104.7 REMARK 620 3 HOH B 311 O 103.2 95.7 REMARK 620 4 HOH B 303 O 85.4 93.1 165.6 REMARK 620 5 HOH B 301 O 91.7 160.5 90.6 77.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 203 DBREF 4DCK A 1773 1940 UNP Q14524 SCN5A_HUMAN 1773 1940 DBREF 4DCK B 1 149 UNP P62158 CALM_HUMAN 1 149 DBREF 4DCK C 10 192 UNP Q92913 FGF13_HUMAN 63 245 SEQADV 4DCK MET C 1 UNP Q92913 EXPRESSION TAG SEQADV 4DCK ALA C 2 UNP Q92913 EXPRESSION TAG SEQADV 4DCK LEU C 3 UNP Q92913 EXPRESSION TAG SEQADV 4DCK LEU C 4 UNP Q92913 EXPRESSION TAG SEQADV 4DCK ARG C 5 UNP Q92913 EXPRESSION TAG SEQADV 4DCK LYS C 6 UNP Q92913 EXPRESSION TAG SEQADV 4DCK SER C 7 UNP Q92913 EXPRESSION TAG SEQADV 4DCK TYR C 8 UNP Q92913 EXPRESSION TAG SEQADV 4DCK SER C 9 UNP Q92913 EXPRESSION TAG SEQRES 1 A 168 GLU ASN PHE SER VAL ALA THR GLU GLU SER THR GLU PRO SEQRES 2 A 168 LEU SER GLU ASP ASP PHE ASP MET PHE TYR GLU ILE TRP SEQRES 3 A 168 GLU LYS PHE ASP PRO GLU ALA THR GLN PHE ILE GLU TYR SEQRES 4 A 168 SER VAL LEU SER ASP PHE ALA ASP ALA LEU SER GLU PRO SEQRES 5 A 168 LEU ARG ILE ALA LYS PRO ASN GLN ILE SER LEU ILE ASN SEQRES 6 A 168 MET ASP LEU PRO MET VAL SER GLY ASP ARG ILE HIS CYS SEQRES 7 A 168 MET ASP ILE LEU PHE ALA PHE THR LYS ARG VAL LEU GLY SEQRES 8 A 168 GLU SER GLY GLU MET ASP ALA LEU LYS ILE GLN MET GLU SEQRES 9 A 168 GLU LYS PHE MET ALA ALA ASN PRO SER LYS ILE SER TYR SEQRES 10 A 168 GLU PRO ILE THR THR THR LEU ARG ARG LYS HIS GLU GLU SEQRES 11 A 168 VAL SER ALA MET VAL ILE GLN ARG ALA PHE ARG ARG HIS SEQRES 12 A 168 LEU LEU GLN ARG SER LEU LYS HIS ALA SER PHE LEU PHE SEQRES 13 A 168 ARG GLN GLN ALA GLY SER GLY LEU SER GLU GLU ASP SEQRES 1 B 149 MET ALA ASP GLN LEU THR GLU GLU GLN ILE ALA GLU PHE SEQRES 2 B 149 LYS GLU ALA PHE SER LEU PHE ASP LYS ASP GLY ASP GLY SEQRES 3 B 149 THR ILE THR THR LYS GLU LEU GLY THR VAL MET ARG SER SEQRES 4 B 149 LEU GLY GLN ASN PRO THR GLU ALA GLU LEU GLN ASP MET SEQRES 5 B 149 ILE ASN GLU VAL ASP ALA ASP GLY ASN GLY THR ILE ASP SEQRES 6 B 149 PHE PRO GLU PHE LEU THR MET MET ALA ARG LYS MET LYS SEQRES 7 B 149 ASP THR ASP SER GLU GLU GLU ILE ARG GLU ALA PHE ARG SEQRES 8 B 149 VAL PHE ASP LYS ASP GLY ASN GLY TYR ILE SER ALA ALA SEQRES 9 B 149 GLU LEU ARG HIS VAL MET THR ASN LEU GLY GLU LYS LEU SEQRES 10 B 149 THR ASP GLU GLU VAL ASP GLU MET ILE ARG GLU ALA ASP SEQRES 11 B 149 ILE ASP GLY ASP GLY GLN VAL ASN TYR GLU GLU PHE VAL SEQRES 12 B 149 GLN MET MET THR ALA LYS SEQRES 1 C 192 MET ALA LEU LEU ARG LYS SER TYR SER GLU PRO GLN LEU SEQRES 2 C 192 LYS GLY ILE VAL THR LYS LEU TYR SER ARG GLN GLY TYR SEQRES 3 C 192 HIS LEU GLN LEU GLN ALA ASP GLY THR ILE ASP GLY THR SEQRES 4 C 192 LYS ASP GLU ASP SER THR TYR THR LEU PHE ASN LEU ILE SEQRES 5 C 192 PRO VAL GLY LEU ARG VAL VAL ALA ILE GLN GLY VAL GLN SEQRES 6 C 192 THR LYS LEU TYR LEU ALA MET ASN SER GLU GLY TYR LEU SEQRES 7 C 192 TYR THR SER GLU LEU PHE THR PRO GLU CYS LYS PHE LYS SEQRES 8 C 192 GLU SER VAL PHE GLU ASN TYR TYR VAL THR TYR SER SER SEQRES 9 C 192 MET ILE TYR ARG GLN GLN GLN SER GLY ARG GLY TRP TYR SEQRES 10 C 192 LEU GLY LEU ASN LYS GLU GLY GLU ILE MET LYS GLY ASN SEQRES 11 C 192 HIS VAL LYS LYS ASN LYS PRO ALA ALA HIS PHE LEU PRO SEQRES 12 C 192 LYS PRO LEU LYS VAL ALA MET TYR LYS GLU PRO SER LEU SEQRES 13 C 192 HIS ASP LEU THR GLU PHE SER ARG SER GLY SER GLY THR SEQRES 14 C 192 PRO THR LYS SER ARG SER VAL SER GLY VAL LEU ASN GLY SEQRES 15 C 192 GLY LYS SER MET SER HIS ASN GLU SER THR HET MG B 201 1 HET MG B 202 1 HET MG B 203 1 HETNAM MG MAGNESIUM ION FORMUL 4 MG 3(MG 2+) FORMUL 7 HOH *202(H2 O) HELIX 1 1 SER A 1787 ASP A 1802 1 16 HELIX 2 2 VAL A 1813 LEU A 1821 1 9 HELIX 3 3 ASN A 1831 MET A 1838 1 8 HELIX 4 4 CYS A 1850 GLY A 1863 1 14 HELIX 5 5 SER A 1865 ASN A 1883 1 19 HELIX 6 6 SER A 1885 TYR A 1889 5 5 HELIX 7 7 LEU A 1896 LEU A 1927 1 32 HELIX 8 8 THR B 6 LEU B 19 1 14 HELIX 9 9 THR B 29 LEU B 40 1 12 HELIX 10 10 THR B 45 GLU B 55 1 11 HELIX 11 11 ASP B 65 ASP B 94 1 30 HELIX 12 12 ALA B 103 LEU B 113 1 11 HELIX 13 13 THR B 118 ASP B 130 1 13 HELIX 14 14 TYR B 139 LYS B 149 1 11 HELIX 15 15 THR C 85 CYS C 88 5 4 HELIX 16 16 LYS C 128 VAL C 132 5 5 HELIX 17 17 LYS C 136 ALA C 139 5 4 SHEET 1 A 2 PHE A1808 GLU A1810 0 SHEET 2 A 2 ARG A1847 HIS A1849 -1 O ILE A1848 N ILE A1809 SHEET 1 B 2 PRO A1841 MET A1842 0 SHEET 2 B 2 THR A1894 THR A1895 -1 O THR A1894 N MET A1842 SHEET 1 C 2 TYR B 100 SER B 102 0 SHEET 2 C 2 GLN B 136 ASN B 138 -1 O VAL B 137 N ILE B 101 SHEET 1 D 8 ILE C 36 THR C 39 0 SHEET 2 D 8 TYR C 26 LEU C 30 -1 N HIS C 27 O THR C 39 SHEET 3 D 8 LEU C 13 SER C 22 -1 N SER C 22 O TYR C 26 SHEET 4 D 8 PHE C 49 GLY C 55 -1 O LEU C 51 N ILE C 16 SHEET 5 D 8 VAL C 58 GLY C 63 -1 O GLN C 62 N ASN C 50 SHEET 6 D 8 PHE C 90 PHE C 95 -1 O PHE C 90 N VAL C 59 SHEET 7 D 8 TYR C 99 ARG C 108 -1 O THR C 101 N SER C 93 SHEET 8 D 8 GLY C 115 TYR C 117 -1 O TRP C 116 N SER C 104 SHEET 1 E 6 ILE C 36 THR C 39 0 SHEET 2 E 6 TYR C 26 LEU C 30 -1 N HIS C 27 O THR C 39 SHEET 3 E 6 LEU C 13 SER C 22 -1 N SER C 22 O TYR C 26 SHEET 4 E 6 PHE C 141 TYR C 151 -1 O LEU C 146 N VAL C 17 SHEET 5 E 6 TYR C 99 ARG C 108 -1 N VAL C 100 O PHE C 141 SHEET 6 E 6 GLY C 115 TYR C 117 -1 O TRP C 116 N SER C 104 SHEET 1 F 2 TYR C 69 MET C 72 0 SHEET 2 F 2 LEU C 78 SER C 81 -1 O TYR C 79 N ALA C 71 LINK OD1 ASP B 96 MG MG B 203 1555 1555 2.03 LINK OD1 ASP B 130 MG MG B 201 1555 1555 2.04 LINK OD2 ASP B 132 MG MG B 202 1555 1555 2.04 LINK OD1 ASP B 132 MG MG B 201 1555 1555 2.05 LINK OD1 ASP B 134 MG MG B 201 1555 1555 2.06 LINK OD1 ASN B 98 MG MG B 203 1555 1555 2.08 LINK OD1 ASP B 94 MG MG B 203 1555 1555 2.19 LINK O TYR B 100 MG MG B 203 1555 1555 2.20 LINK O GLN B 136 MG MG B 201 1555 1555 2.24 LINK OD2 ASP B 96 MG MG B 203 1555 1555 2.56 LINK MG MG B 202 O HOH B 358 1555 1555 1.82 LINK MG MG B 201 O HOH B 304 1555 1555 2.30 LINK MG MG B 202 O HOH B 311 1555 1555 2.38 LINK MG MG B 203 O HOH B 339 1555 1555 2.38 LINK MG MG B 203 O HOH B 306 1555 1555 2.39 LINK MG MG B 202 O HOH B 303 1555 1555 2.39 LINK MG MG B 201 O HOH B 309 1555 1555 2.40 LINK MG MG B 202 O HOH B 301 1555 1555 2.57 CISPEP 1 GLU A 1823 PRO A 1824 0 2.22 CISPEP 2 LYS A 1829 PRO A 1830 0 -3.48 CISPEP 3 SER A 1844 GLY A 1845 0 -8.29 SITE 1 AC1 6 ASP B 130 ASP B 132 ASP B 134 GLN B 136 SITE 2 AC1 6 HOH B 304 HOH B 309 SITE 1 AC2 6 ASP B 81 ASP B 132 HOH B 301 HOH B 303 SITE 2 AC2 6 HOH B 311 HOH B 358 SITE 1 AC3 6 ASP B 94 ASP B 96 ASN B 98 TYR B 100 SITE 2 AC3 6 HOH B 306 HOH B 339 CRYST1 126.041 126.041 126.041 90.00 90.00 90.00 P 21 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007934 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007934 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007934 0.00000 MASTER 443 0 3 17 22 0 6 6 0 0 0 40 END