HEADER HYDROLASE 23-AUG-13 4C3G TITLE CRYO-EM STRUCTURE OF ACTIVATED AND OLIGOMERIC RESTRICTION ENDONUCLEASE TITLE 2 SGRAI COMPND MOL_ID: 1; COMPND 2 MOLECULE: SGRAIR RESTRICTION ENZYME; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: DNA-BINDING DOMAIN, RESIDUES 2-338; COMPND 5 SYNONYM: SGRAI; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: AN SGRAI DIMER. THE OLIGOMERIC HELIX IS FORMED FROM COMPND 8 MULTIPLE COPIES OF SUCH SGRAI DIMERS BOUND TO DNA.; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: 5'-D(*GP*AP*TP*GP*CP*GP*TP*GP*GP*GP*TP*CP*TP*TP COMPND 11 *CP*AP*CP*AP)-3'; COMPND 12 CHAIN: C, D; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: 2 COPIES OF PRE-CLEAVED DNA CONTAINING STICKY ENDS AND COMPND 15 THE SGRAI RECOGNITION SEQUENCE; COMPND 16 MOL_ID: 3; COMPND 17 MOLECULE: 5'-D(*CP*CP*GP*GP*TP*GP*TP*GP*AP*AP*GP*AP*CP*CP COMPND 18 *CP*AP*CP*GP*CP*AP*TP*CP)-3'; COMPND 19 CHAIN: E, F; COMPND 20 ENGINEERED: YES; COMPND 21 OTHER_DETAILS: 2 COPIES OF PRE-CLEAVED DNA CONTAINING STICKY ENDS AND COMPND 22 THE SGRAI RECOGNITION SEQUENCE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES GRISEUS; SOURCE 3 ORGANISM_TAXID: 1911; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: ER2566; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET21A_SGRA1R; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: STREPTOMYCES GRISEUS; SOURCE 12 ORGANISM_TAXID: 1911; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: STREPTOMYCES GRISEUS; SOURCE 16 ORGANISM_TAXID: 1911 KEYWDS HYDROLASE, RESTRICTION ENDONUCLEASE, ALLOSTERY, DNA CLEAVAGE, KEYWDS 2 PARASITE-HOST INTERACTION EXPDTA ELECTRON MICROSCOPY MDLTYP CA ATOMS ONLY, CHAIN A, B AUTHOR D.LYUMKIS,H.TALLEY,A.STEWART,S.SHAH,C.K.PARK,F.TAMA,C.S.POTTER, AUTHOR 2 B.CARRAGHER,N.C.HORTON REVDAT 5 23-AUG-17 4C3G 1 REMARK REVDAT 4 30-OCT-13 4C3G 1 JRNL REVDAT 3 09-OCT-13 4C3G 1 JRNL REVDAT 2 18-SEP-13 4C3G 1 REMARK REVDAT 1 11-SEP-13 4C3G 0 JRNL AUTH D.LYUMKIS,H.TALLEY,A.STEWART,S.SHAH,C.K.PARK,F.TAMA, JRNL AUTH 2 C.S.POTTER,B.CARRAGHER,N.C.HORTON JRNL TITL ALLOSTERIC REGULATION OF DNA CLEAVAGE AND JRNL TITL 2 SEQUENCE-SPECIFICITY THROUGH RUN-ON OLIGOMERIZATION. JRNL REF STRUCTURE V. 21 1848 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 24055317 JRNL DOI 10.1016/J.STR.2013.08.012 REMARK 2 REMARK 2 RESOLUTION. 8.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : DIREX, FREALIGN, XMIPP REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 3DVO REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : METHOD--DIREX REFINEMENT PROTOCOL--FLEXIBLE REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 1.420 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 8.600 REMARK 3 NUMBER OF PARTICLES : 1918 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: CATALASE CRYSTALS REMARK 3 REMARK 3 OTHER DETAILS: WE FIRST CONDUCTED 25 ITERATIONS OF THE IHRSR REMARK 3 ROUTINE TO REFINE THE FULL CRYODATA SET AND OBTAIN FINAL HELICAL REMARK 3 PARAMETERS -- -86.2 HELICAL TWIST AND 21.6 A RISE. SUBSEQUENTLY, REMARK 3 THE MODEL FROM IHRSR WAS USED FOR REFINEMENT IN FREALIGN REMARK 3 SPECIFYING DIFFERENT DOSE- -FRACTIONATED STACKS FOR THE REMARK 3 REFINEMENT (32 E- PER A2) AND RECONSTRUCTION (16 E- PER A2) REMARK 3 ROUTINES. THE FINAL RECONSTRUCTION WAS OBTAINED FROM 1,918 REMARK 3 FILAMENT SEGMENTS, AVERAGED 8 TIMES TO ACCOUNT FOR THE HELICAL REMARK 3 SYMMETRY BASES WERE OMITTED FROM THE FITTED DNA. ONLY THE REMARK 3 PHOSPHATE-SUGAR BACKBONE IS SHOWN. SUBMISSION BASED ON REMARK 3 EXPERIMENTAL DATA FROM EMDB EMD-2441. (DEPOSITION ID: 11901). REMARK 4 REMARK 4 4C3G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE. REMARK 100 THE DEPOSITION ID IS D_1290058056. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : HELICAL ARRAY REMARK 245 PARTICLE TYPE : HELICAL REMARK 245 NAME OF SAMPLE : HELICAL ASYMMETRIC UNIT OF AN REMARK 245 SGRAI DNA-BOUND DIMER REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.20 REMARK 245 SAMPLE SUPPORT DETAILS : HOLEY CARBON REMARK 245 SAMPLE VITRIFICATION DETAILS : SPECIMENS WERE PREPARED FOR REMARK 245 CRYO-EM BY APPLYING 3 REMARK 245 MICROLITERS OF SAMPLE IN REMARK 245 BINDING BUFFER TO A HOLEY REMARK 245 CARBON C-FLAT GRID (CF-2- 2-400) REMARK 245 (PROTOCHIPS, INC.) THAT HAD REMARK 245 BEEN PLASMA CLEANED (GATAN, REMARK 245 SOLARUS) FOR 5 SEC. THE SAMPLE REMARK 245 WAS ALLOWED TO ADSORB TO THE REMARK 245 GRID FOR 30 SEC., THEN PLUNGE- REMARK 245 FROZEN INTO LIQUID ETHANE USING REMARK 245 A MANUAL CRYO-PLUNGER AT 4 C. REMARK 245 SAMPLE BUFFER : 10 MM TRIS-HCL PH 8.0, 150 MM REMARK 245 NACL, 5 MM CA(OAC) 2, 0.5 MM DTT REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 19-SEP-12 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TECNAI F20 REMARK 245 DETECTOR TYPE : DIRECT ELECTRON DE-12 (4K X REMARK 245 3K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.00 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 16.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 60000 REMARK 245 CALIBRATED MAGNIFICATION : 41000 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, E, D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 302 REMARK 465 ARG A 303 REMARK 465 SER A 304 REMARK 465 ALA A 305 REMARK 465 GLY B 302 REMARK 465 ARG B 303 REMARK 465 SER B 304 REMARK 465 ALA B 305 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DG C 1 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG C 1 C2 N2 N3 C4 REMARK 470 DA C 2 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA C 2 C2 N3 C4 REMARK 470 DT C 3 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT C 3 C7 C6 REMARK 470 DG C 4 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG C 4 C2 N2 N3 C4 REMARK 470 DC C 5 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC C 5 C6 REMARK 470 DG C 6 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG C 6 C2 N2 N3 C4 REMARK 470 DT C 7 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT C 7 C7 C6 REMARK 470 DG C 8 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG C 8 C2 N2 N3 C4 REMARK 470 DG C 9 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG C 9 C2 N2 N3 C4 REMARK 470 DG C 10 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG C 10 C2 N2 N3 C4 REMARK 470 DT C 11 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT C 11 C7 C6 REMARK 470 DC C 12 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC C 12 C6 REMARK 470 DT C 13 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT C 13 C7 C6 REMARK 470 DT C 14 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT C 14 C7 C6 REMARK 470 DC C 15 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC C 15 C6 REMARK 470 DA C 16 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA C 16 C2 N3 C4 REMARK 470 DC C 17 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC C 17 C6 REMARK 470 DA C 18 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA C 18 C2 N3 C4 REMARK 470 DC E 19 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC E 19 C6 REMARK 470 DC E 20 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC E 20 C6 REMARK 470 DG E 21 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG E 21 C2 N2 N3 C4 REMARK 470 DG E 22 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG E 22 C2 N2 N3 C4 REMARK 470 DT E 23 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT E 23 C7 C6 REMARK 470 DG E 24 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG E 24 C2 N2 N3 C4 REMARK 470 DT E 25 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT E 25 C7 C6 REMARK 470 DG E 26 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG E 26 C2 N2 N3 C4 REMARK 470 DA E 27 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA E 27 C2 N3 C4 REMARK 470 DA E 28 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA E 28 C2 N3 C4 REMARK 470 DG E 29 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG E 29 C2 N2 N3 C4 REMARK 470 DA E 30 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA E 30 C2 N3 C4 REMARK 470 DC E 31 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC E 31 C6 REMARK 470 DC E 32 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC E 32 C6 REMARK 470 DC E 33 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC E 33 C6 REMARK 470 DA E 34 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA E 34 C2 N3 C4 REMARK 470 DC E 35 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC E 35 C6 REMARK 470 DG E 36 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG E 36 C2 N2 N3 C4 REMARK 470 DC E 37 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC E 37 C6 REMARK 470 DA E 38 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA E 38 C2 N3 C4 REMARK 470 DT E 39 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT E 39 C7 C6 REMARK 470 DC E 40 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC E 40 C6 REMARK 470 DG D 1 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG D 1 C2 N2 N3 C4 REMARK 470 DA D 2 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA D 2 C2 N3 C4 REMARK 470 DT D 3 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT D 3 C7 C6 REMARK 470 DG D 4 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG D 4 C2 N2 N3 C4 REMARK 470 DC D 5 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC D 5 C6 REMARK 470 DG D 6 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG D 6 C2 N2 N3 C4 REMARK 470 DT D 7 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT D 7 C7 C6 REMARK 470 DG D 8 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG D 8 C2 N2 N3 C4 REMARK 470 DG D 9 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG D 9 C2 N2 N3 C4 REMARK 470 DG D 10 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG D 10 C2 N2 N3 C4 REMARK 470 DT D 11 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT D 11 C7 C6 REMARK 470 DC D 12 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC D 12 C6 REMARK 470 DT D 13 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT D 13 C7 C6 REMARK 470 DT D 14 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT D 14 C7 C6 REMARK 470 DC D 15 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC D 15 C6 REMARK 470 DA D 16 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA D 16 C2 N3 C4 REMARK 470 DC D 17 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC D 17 C6 REMARK 470 DA D 18 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA D 18 C2 N3 C4 REMARK 470 DC F 19 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC F 19 C6 REMARK 470 DC F 20 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC F 20 C6 REMARK 470 DG F 21 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG F 21 C2 N2 N3 C4 REMARK 470 DG F 22 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG F 22 C2 N2 N3 C4 REMARK 470 DT F 23 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT F 23 C7 C6 REMARK 470 DG F 24 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG F 24 C2 N2 N3 C4 REMARK 470 DT F 25 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT F 25 C7 C6 REMARK 470 DG F 26 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG F 26 C2 N2 N3 C4 REMARK 470 DA F 27 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA F 27 C2 N3 C4 REMARK 470 DA F 28 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA F 28 C2 N3 C4 REMARK 470 DG F 29 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG F 29 C2 N2 N3 C4 REMARK 470 DA F 30 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA F 30 C2 N3 C4 REMARK 470 DC F 31 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC F 31 C6 REMARK 470 DC F 32 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC F 32 C6 REMARK 470 DC F 33 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC F 33 C6 REMARK 470 DA F 34 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA F 34 C2 N3 C4 REMARK 470 DC F 35 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC F 35 C6 REMARK 470 DG F 36 N9 C8 N7 C5 C6 O6 N1 REMARK 470 DG F 36 C2 N2 N3 C4 REMARK 470 DC F 37 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC F 37 C6 REMARK 470 DA F 38 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA F 38 C2 N3 C4 REMARK 470 DT F 39 N1 C2 O2 N3 C4 O4 C5 REMARK 470 DT F 39 C7 C6 REMARK 470 DC F 40 N1 C2 O2 N3 C4 N4 C5 REMARK 470 DC F 40 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CA LEU A 37 O3' DG E 24 1.77 REMARK 500 CA LEU A 37 P DT E 25 2.00 REMARK 500 CA GLN B 39 OP1 DT F 25 2.08 REMARK 500 CA ALA A 38 OP1 DT E 25 2.18 REMARK 500 CA LEU A 37 OP2 DT E 25 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-2441 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF ACTIVATED AND OLIGOMERIC RESTRICTION REMARK 900 ENDONUCLEASE SGRAI DBREF 4C3G A 2 338 UNP Q9F6L0 Q9F6L0_STRGR 2 338 DBREF 4C3G B 2 338 UNP Q9F6L0 Q9F6L0_STRGR 2 338 DBREF 4C3G C 1 18 PDB 4C3G 4C3G 1 18 DBREF 4C3G D 1 18 PDB 4C3G 4C3G 1 18 DBREF 4C3G E 19 40 PDB 4C3G 4C3G 19 40 DBREF 4C3G F 19 40 PDB 4C3G 4C3G 19 40 SEQADV 4C3G ASP A 63 UNP Q9F6L0 ASN 63 CONFLICT SEQADV 4C3G ASP B 63 UNP Q9F6L0 ASN 63 CONFLICT SEQRES 1 A 337 PRO PHE THR TYR SER ILE GLU ALA THR ARG ASN LEU ALA SEQRES 2 A 337 THR THR GLU ARG CYS ILE GLN ASP ILE ARG ASN ALA PRO SEQRES 3 A 337 VAL ARG ASN ARG SER THR GLN PHE GLN LEU ALA GLN GLN SEQRES 4 A 337 ASN MET LEU ALA TYR THR PHE GLY GLU VAL ILE PRO GLY SEQRES 5 A 337 PHE ALA SER ALA GLY ILE ASN GLY MET ASP TYR ARG ASP SEQRES 6 A 337 VAL ILE GLY ARG PRO VAL GLU ASN ALA VAL THR GLU GLY SEQRES 7 A 337 THR HIS PHE PHE ARG ASP ASP PHE ARG VAL ASP SER ASN SEQRES 8 A 337 ALA LYS ALA LYS VAL ALA GLY ASP ILE PHE GLU ILE VAL SEQRES 9 A 337 SER SER ALA VAL MET TRP ASN CYS ALA ALA ARG TRP ASN SEQRES 10 A 337 SER LEU MET VAL GLY GLU GLY TRP ARG SER GLN PRO ARG SEQRES 11 A 337 TYR SER ARG PRO THR LEU SER PRO SER PRO ARG ARG GLN SEQRES 12 A 337 VAL ALA VAL LEU ASN LEU PRO ARG SER PHE ASP TRP VAL SEQRES 13 A 337 SER LEU LEU VAL PRO GLU SER GLN GLU VAL ILE GLU GLU SEQRES 14 A 337 PHE ARG ALA GLY LEU ARG LYS ASP GLY LEU GLY LEU PRO SEQRES 15 A 337 THR SER THR PRO ASP LEU ALA VAL VAL VAL LEU PRO GLU SEQRES 16 A 337 GLU PHE GLN ASN ASP GLU MET TRP ARG GLU GLU ILE ALA SEQRES 17 A 337 GLY LEU THR ARG PRO ASN GLN ILE LEU LEU SER GLY ALA SEQRES 18 A 337 TYR GLN ARG LEU GLN GLY ARG VAL GLN PRO GLY GLU ILE SEQRES 19 A 337 SER LEU ALA VAL ALA PHE LYS ARG SER LEU ARG SER ASP SEQRES 20 A 337 ARG LEU TYR GLN PRO LEU TYR GLU ALA ASN VAL MET GLN SEQRES 21 A 337 LEU LEU LEU GLU GLY LYS LEU GLY ALA PRO LYS VAL GLU SEQRES 22 A 337 PHE GLU VAL HIS THR LEU ALA PRO GLU GLY THR ASN ALA SEQRES 23 A 337 PHE VAL THR TYR GLU ALA ALA SER LEU TYR GLY LEU ALA SEQRES 24 A 337 GLU GLY ARG SER ALA VAL HIS ARG ALA ILE ARG GLU LEU SEQRES 25 A 337 TYR VAL PRO PRO THR ALA ALA ASP LEU ALA ARG ARG PHE SEQRES 26 A 337 PHE ALA PHE LEU ASN GLU ARG MET GLU LEU VAL ASN SEQRES 1 B 337 PRO PHE THR TYR SER ILE GLU ALA THR ARG ASN LEU ALA SEQRES 2 B 337 THR THR GLU ARG CYS ILE GLN ASP ILE ARG ASN ALA PRO SEQRES 3 B 337 VAL ARG ASN ARG SER THR GLN PHE GLN LEU ALA GLN GLN SEQRES 4 B 337 ASN MET LEU ALA TYR THR PHE GLY GLU VAL ILE PRO GLY SEQRES 5 B 337 PHE ALA SER ALA GLY ILE ASN GLY MET ASP TYR ARG ASP SEQRES 6 B 337 VAL ILE GLY ARG PRO VAL GLU ASN ALA VAL THR GLU GLY SEQRES 7 B 337 THR HIS PHE PHE ARG ASP ASP PHE ARG VAL ASP SER ASN SEQRES 8 B 337 ALA LYS ALA LYS VAL ALA GLY ASP ILE PHE GLU ILE VAL SEQRES 9 B 337 SER SER ALA VAL MET TRP ASN CYS ALA ALA ARG TRP ASN SEQRES 10 B 337 SER LEU MET VAL GLY GLU GLY TRP ARG SER GLN PRO ARG SEQRES 11 B 337 TYR SER ARG PRO THR LEU SER PRO SER PRO ARG ARG GLN SEQRES 12 B 337 VAL ALA VAL LEU ASN LEU PRO ARG SER PHE ASP TRP VAL SEQRES 13 B 337 SER LEU LEU VAL PRO GLU SER GLN GLU VAL ILE GLU GLU SEQRES 14 B 337 PHE ARG ALA GLY LEU ARG LYS ASP GLY LEU GLY LEU PRO SEQRES 15 B 337 THR SER THR PRO ASP LEU ALA VAL VAL VAL LEU PRO GLU SEQRES 16 B 337 GLU PHE GLN ASN ASP GLU MET TRP ARG GLU GLU ILE ALA SEQRES 17 B 337 GLY LEU THR ARG PRO ASN GLN ILE LEU LEU SER GLY ALA SEQRES 18 B 337 TYR GLN ARG LEU GLN GLY ARG VAL GLN PRO GLY GLU ILE SEQRES 19 B 337 SER LEU ALA VAL ALA PHE LYS ARG SER LEU ARG SER ASP SEQRES 20 B 337 ARG LEU TYR GLN PRO LEU TYR GLU ALA ASN VAL MET GLN SEQRES 21 B 337 LEU LEU LEU GLU GLY LYS LEU GLY ALA PRO LYS VAL GLU SEQRES 22 B 337 PHE GLU VAL HIS THR LEU ALA PRO GLU GLY THR ASN ALA SEQRES 23 B 337 PHE VAL THR TYR GLU ALA ALA SER LEU TYR GLY LEU ALA SEQRES 24 B 337 GLU GLY ARG SER ALA VAL HIS ARG ALA ILE ARG GLU LEU SEQRES 25 B 337 TYR VAL PRO PRO THR ALA ALA ASP LEU ALA ARG ARG PHE SEQRES 26 B 337 PHE ALA PHE LEU ASN GLU ARG MET GLU LEU VAL ASN SEQRES 1 C 18 DG DA DT DG DC DG DT DG DG DG DT DC DT SEQRES 2 C 18 DT DC DA DC DA SEQRES 1 E 22 DC DC DG DG DT DG DT DG DA DA DG DA DC SEQRES 2 E 22 DC DC DA DC DG DC DA DT DC SEQRES 1 D 18 DG DA DT DG DC DG DT DG DG DG DT DC DT SEQRES 2 D 18 DT DC DA DC DA SEQRES 1 F 22 DC DC DG DG DT DG DT DG DA DA DG DA DC SEQRES 2 F 22 DC DC DA DC DG DC DA DT DC CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 316 0 0 0 0 0 0 6 0 0 0 60 END