HEADER OXIDOREDUCTASE 05-MAY-13 4BM2 TITLE CRYSTAL STRUCTURE OF MANGANESE PEROXIDASE 4 FROM PLEUROTUS TITLE 2 OSTREATUS - CRYSTAL FORM II COMPND MOL_ID: 1; COMPND 2 MOLECULE: MANGANESE PEROXIDASE 4; COMPND 3 CHAIN: A; COMPND 4 EC: 1.11.1.13; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLEUROTUS OSTREATUS; SOURCE 3 ORGANISM_COMMON: OYSTER MUSHROOM; SOURCE 4 ORGANISM_TAXID: 5322; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 316407; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: W3110 KEYWDS OXIDOREDUCTASE, CLASS II (FUNGAL) PEROXIDASES, PROTOPORPHYRIN IX, KEYWDS 2 ELECTRON T LIGNIN PEROXIDASE, LIGNIN DEGRADATION EXPDTA X-RAY DIFFRACTION AUTHOR F.J.MEDRANO,A.ROMERO REVDAT 1 15-JAN-14 4BM2 0 JRNL AUTH E.FERNANDEZ-FUEYO,F.J.RUIZ-DUENAS,M.J.MARTINEZ,A.ROMERO, JRNL AUTH 2 K.E.HAMMEL,F.J.MEDRANO,A.T.MARTINEZ JRNL TITL LIGNINOLYTIC PEROXIDASE GENES IN THE OYSTER MUSHROOM JRNL TITL 2 GENOME: HETEROLOGOUS EXPRESSION, MOLECULAR STRUCTURE, JRNL TITL 3 CATALYTIC AND STABILITY PROPERTIES, AND LIGNIN-DEGRADING JRNL TITL 4 ABILITY. JRNL REF BIOTECHNOL.BIOFUELS V. 7 2 2014 JRNL REFN ISSN 1754-6834 JRNL PMID 24387130 JRNL DOI 10.1186/1754-6834-7-2 REMARK 2 REMARK 2 RESOLUTION. 1.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.391 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.280 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.34 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.09 REMARK 3 NUMBER OF REFLECTIONS : 78113 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.2221 REMARK 3 R VALUE (WORKING SET) : 0.2210 REMARK 3 FREE R VALUE : 0.2445 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 3884 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.3009 - 4.2225 1.00 2796 145 0.2337 0.2090 REMARK 3 2 4.2225 - 3.3519 1.00 2745 137 0.2005 0.2112 REMARK 3 3 3.3519 - 2.9283 1.00 2760 143 0.2106 0.2381 REMARK 3 4 2.9283 - 2.6606 1.00 2726 141 0.2218 0.2235 REMARK 3 5 2.6606 - 2.4699 0.99 2732 149 0.2123 0.2356 REMARK 3 6 2.4699 - 2.3243 0.99 2715 136 0.2138 0.2351 REMARK 3 7 2.3243 - 2.2079 0.99 2705 146 0.2132 0.2474 REMARK 3 8 2.2079 - 2.1118 0.99 2695 147 0.2086 0.2470 REMARK 3 9 2.1118 - 2.0305 0.99 2715 144 0.2166 0.2693 REMARK 3 10 2.0305 - 1.9604 0.99 2737 145 0.2233 0.2628 REMARK 3 11 1.9604 - 1.8991 0.99 2652 137 0.2281 0.2543 REMARK 3 12 1.8991 - 1.8449 0.99 2697 143 0.2204 0.2539 REMARK 3 13 1.8449 - 1.7963 0.99 2725 138 0.2299 0.2686 REMARK 3 14 1.7963 - 1.7525 0.99 2695 137 0.2159 0.2459 REMARK 3 15 1.7525 - 1.7126 0.99 2687 142 0.2229 0.2398 REMARK 3 16 1.7126 - 1.6762 0.98 2640 143 0.2293 0.3035 REMARK 3 17 1.6762 - 1.6426 0.98 2686 145 0.2226 0.2487 REMARK 3 18 1.6426 - 1.6116 0.98 2674 149 0.2192 0.2652 REMARK 3 19 1.6116 - 1.5829 0.98 2690 138 0.2185 0.2569 REMARK 3 20 1.5829 - 1.5560 0.98 2660 137 0.2207 0.2705 REMARK 3 21 1.5560 - 1.5309 0.98 2674 134 0.2262 0.2786 REMARK 3 22 1.5309 - 1.5074 0.98 2646 143 0.2234 0.2681 REMARK 3 23 1.5074 - 1.4852 0.98 2647 142 0.2404 0.2868 REMARK 3 24 1.4852 - 1.4643 0.98 2665 137 0.2394 0.2885 REMARK 3 25 1.4643 - 1.4445 0.97 2652 129 0.2401 0.2740 REMARK 3 26 1.4445 - 1.4257 0.97 2621 140 0.2486 0.3024 REMARK 3 27 1.4257 - 1.4079 0.97 2712 137 0.2722 0.2687 REMARK 3 28 1.4079 - 1.3909 0.54 1480 80 0.4137 0.4121 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.18 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.97 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2677 REMARK 3 ANGLE : 1.256 3638 REMARK 3 CHIRALITY : 0.079 388 REMARK 3 PLANARITY : 0.006 481 REMARK 3 DIHEDRAL : 14.097 979 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 2 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.1161 -10.8355 18.2498 REMARK 3 T TENSOR REMARK 3 T11: 0.0821 T22: 0.1471 REMARK 3 T33: 0.1555 T12: 0.0047 REMARK 3 T13: -0.0137 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.8445 L22: 0.8830 REMARK 3 L33: 0.6854 L12: -0.3451 REMARK 3 L13: 0.3329 L23: -0.1362 REMARK 3 S TENSOR REMARK 3 S11: -0.0315 S12: 0.0100 S13: 0.0367 REMARK 3 S21: -0.0446 S22: -0.1332 S23: -0.2595 REMARK 3 S31: -0.0178 S32: 0.2444 S33: 0.0614 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 28 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8760 -10.0101 16.5463 REMARK 3 T TENSOR REMARK 3 T11: 0.0882 T22: 0.0766 REMARK 3 T33: 0.0895 T12: 0.0141 REMARK 3 T13: -0.0011 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.9926 L22: 1.1098 REMARK 3 L33: 0.8293 L12: 0.0159 REMARK 3 L13: -0.3476 L23: -0.2100 REMARK 3 S TENSOR REMARK 3 S11: -0.0379 S12: -0.0064 S13: -0.0380 REMARK 3 S21: -0.0133 S22: 0.0439 S23: 0.0628 REMARK 3 S31: 0.0881 S32: 0.0001 S33: -0.0277 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 71 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2609 -16.3647 13.3626 REMARK 3 T TENSOR REMARK 3 T11: 0.1277 T22: 0.0958 REMARK 3 T33: 0.0919 T12: 0.0060 REMARK 3 T13: 0.0027 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.4749 L22: 0.6388 REMARK 3 L33: 0.3769 L12: 0.0985 REMARK 3 L13: -0.1977 L23: -0.1470 REMARK 3 S TENSOR REMARK 3 S11: -0.0438 S12: 0.0902 S13: -0.0734 REMARK 3 S21: -0.1358 S22: 0.0131 S23: 0.0487 REMARK 3 S31: 0.1165 S32: -0.0324 S33: 0.0233 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 121 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.8722 -9.0765 20.9715 REMARK 3 T TENSOR REMARK 3 T11: 0.0964 T22: 0.0806 REMARK 3 T33: 0.0767 T12: 0.0105 REMARK 3 T13: 0.0233 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.2254 L22: 0.2326 REMARK 3 L33: 0.3628 L12: -0.1515 REMARK 3 L13: 0.2507 L23: -0.0902 REMARK 3 S TENSOR REMARK 3 S11: -0.0185 S12: -0.0094 S13: 0.0056 REMARK 3 S21: -0.0293 S22: 0.0135 S23: 0.0835 REMARK 3 S31: 0.0337 S32: 0.0174 S33: 0.0117 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 141 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5694 -2.7457 14.5659 REMARK 3 T TENSOR REMARK 3 T11: 0.0742 T22: 0.0884 REMARK 3 T33: 0.0713 T12: -0.0063 REMARK 3 T13: -0.0004 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.4069 L22: 0.3277 REMARK 3 L33: 0.3105 L12: -0.1052 REMARK 3 L13: -0.1816 L23: -0.1929 REMARK 3 S TENSOR REMARK 3 S11: -0.0099 S12: 0.0247 S13: -0.0331 REMARK 3 S21: 0.0548 S22: 0.0099 S23: 0.0155 REMARK 3 S31: 0.0324 S32: -0.0434 S33: -0.0197 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESID 189 THROUGH 257 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3112 6.4789 5.1500 REMARK 3 T TENSOR REMARK 3 T11: 0.0571 T22: 0.0867 REMARK 3 T33: 0.0672 T12: 0.0021 REMARK 3 T13: -0.0005 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.3742 L22: 0.3195 REMARK 3 L33: 0.3268 L12: -0.0548 REMARK 3 L13: 0.0214 L23: -0.0239 REMARK 3 S TENSOR REMARK 3 S11: 0.0286 S12: 0.0229 S13: -0.0130 REMARK 3 S21: 0.0082 S22: -0.0203 S23: 0.0308 REMARK 3 S31: 0.0285 S32: -0.0480 S33: -0.0132 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESID 258 THROUGH 285 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9451 -0.7539 24.1563 REMARK 3 T TENSOR REMARK 3 T11: 0.1210 T22: 0.0993 REMARK 3 T33: 0.0897 T12: -0.0010 REMARK 3 T13: 0.0081 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.2634 L22: 0.7977 REMARK 3 L33: 0.3056 L12: -0.0759 REMARK 3 L13: 0.0066 L23: -0.3108 REMARK 3 S TENSOR REMARK 3 S11: -0.0290 S12: -0.0363 S13: -0.0039 REMARK 3 S21: 0.1380 S22: 0.0268 S23: 0.0846 REMARK 3 S31: -0.0070 S32: 0.0522 S33: -0.0021 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN A AND (RESID 286 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1560 13.5760 8.7103 REMARK 3 T TENSOR REMARK 3 T11: 0.1010 T22: 0.0954 REMARK 3 T33: 0.0849 T12: -0.0132 REMARK 3 T13: -0.0105 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 0.5825 L22: 0.6898 REMARK 3 L33: 0.4366 L12: -0.1419 REMARK 3 L13: 0.1748 L23: -0.4133 REMARK 3 S TENSOR REMARK 3 S11: 0.0306 S12: 0.0332 S13: 0.0946 REMARK 3 S21: 0.0124 S22: -0.0274 S23: -0.0506 REMARK 3 S31: -0.0161 S32: 0.0687 S33: 0.0031 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN A AND (RESID 320 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9274 11.7709 -3.3062 REMARK 3 T TENSOR REMARK 3 T11: 0.1717 T22: 0.1255 REMARK 3 T33: 0.0915 T12: -0.0094 REMARK 3 T13: 0.0409 T23: 0.0287 REMARK 3 L TENSOR REMARK 3 L11: 0.5918 L22: 0.3249 REMARK 3 L33: 0.7197 L12: 0.1923 REMARK 3 L13: 0.0112 L23: 0.1236 REMARK 3 S TENSOR REMARK 3 S11: -0.0343 S12: 0.0445 S13: 0.0010 REMARK 3 S21: 0.0991 S22: 0.0131 S23: 0.0082 REMARK 3 S31: -0.0488 S32: 0.1986 S33: 0.0381 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4BM2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-MAY-13. REMARK 100 THE PDBE ID CODE IS EBI-56764. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL (PILATUS) REMARK 200 DETECTOR MANUFACTURER : DECTRIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78216 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.40 REMARK 200 RESOLUTION RANGE LOW (A) : 50.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 6.4 REMARK 200 R MERGE (I) : 0.15 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.50 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.47 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.2 REMARK 200 R MERGE FOR SHELL (I) : 0.58 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 3FMU REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA-ACETATE AT PH 4.6 & REMARK 280 2.0 M (NH4)2SO4. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 61.83500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.28000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 61.83500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 43.28000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 31 O HOH A 2057 2.19 REMARK 500 O GLU A 34 O HOH A 2066 1.98 REMARK 500 O ALA A 56 O HOH A 2108 1.96 REMARK 500 ND2 ASN A 120 O HOH A 2066 2.06 REMARK 500 O PRO A 148 O HOH A 2249 2.19 REMARK 500 NZ LYS A 211 O HOH A 2315 2.17 REMARK 500 O GLY A 223 O HOH A 2249 2.04 REMARK 500 O HOH A 2156 O HOH A 2157 2.15 REMARK 500 O HOH A 2185 O HOH A 2191 2.11 REMARK 500 O HOH A 2251 O HOH A 2252 2.18 REMARK 500 O HOH A 2260 O HOH A 2261 1.83 REMARK 500 O HOH A 2321 O HOH A 2322 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 28 -71.95 -109.23 REMARK 500 PHE A 75 47.39 -105.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 500 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HEM A 500 NA REMARK 620 2 HEM A 500 NB 89.9 REMARK 620 3 HEM A 500 NC 164.7 88.1 REMARK 620 4 HIS A 176 NE2 97.6 98.0 97.7 REMARK 620 5 HEM A 500 ND 86.1 163.6 91.5 98.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2099 O REMARK 620 2 ASP A 49 OD1 167.5 REMARK 620 3 ASP A 69 OD1 101.8 87.7 REMARK 620 4 SER A 71 OG 81.8 92.8 75.4 REMARK 620 5 HOH A2093 O 80.7 86.9 146.7 72.1 REMARK 620 6 ASP A 49 O 99.4 78.2 138.3 143.4 72.1 REMARK 620 7 GLY A 67 O 93.1 97.7 72.0 145.2 141.3 71.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 177 O REMARK 620 2 ASP A 194 OD1 76.7 REMARK 620 3 ASP A 194 OD2 92.7 49.7 REMARK 620 4 SER A 177 OG 72.8 114.5 75.4 REMARK 620 5 THR A 196 O 83.0 78.7 127.5 147.9 REMARK 620 6 THR A 196 OG1 147.5 80.9 90.5 138.8 69.7 REMARK 620 7 ASP A 199 O 88.8 154.1 154.2 80.6 78.2 101.9 REMARK 620 8 ASP A 201 OD1 142.8 125.6 85.0 70.7 127.1 69.7 78.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1339 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1340 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1341 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1342 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BLK RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM REMARK 900 PLEUROTUS OSTREATUS - CRYSTAL FORM I REMARK 900 RELATED ID: 4BLL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM REMARK 900 PLEUROTUS OSTREATUS - CRYSTAL FORM II REMARK 900 RELATED ID: 4BLN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM REMARK 900 PLEUROTUS OSTREATUS - CRYSTAL FORM III REMARK 900 RELATED ID: 4BLX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM REMARK 900 PLEUROTUS OSTREATUS - CRYSTAL FORM IV REMARK 900 RELATED ID: 4BLY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM REMARK 900 PLEUROTUS OSTREATUS - CRYSTAL FORM V REMARK 900 RELATED ID: 4BLZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM REMARK 900 PLEUROTUS OSTREATUS - CRYSTAL FORM VI REMARK 900 RELATED ID: 4BM0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM REMARK 900 PLEUROTUS OSTREATUS - CRYSTAL FORM VII REMARK 900 RELATED ID: 4BM1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MANGANESE PEROXIDASE 4 FROM REMARK 900 PLEUROTUS OSTREATUS - CRYSTAL FORM I REMARK 900 RELATED ID: 4BM3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MANGANESE PEROXIDASE 4 FROM REMARK 900 PLEUROTUS OSTREATUS - CRYSTAL FORM III REMARK 900 RELATED ID: 4BM4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MANGANESE PEROXIDASE 4 FROM REMARK 900 PLEUROTUS OSTREATUS - CRYSTAL FORM IV DBREF 4BM2 A 1 338 PDB 4BM2 4BM2 1 338 SEQRES 1 A 338 MET ALA LYS CYS SER LYS GLY ARG THR ALA SER ASN ASP SEQRES 2 A 338 ALA CYS CYS VAL TRP PHE ASP VAL LEU ASP ASP ILE GLN SEQRES 3 A 338 GLU ASN LEU PHE ASP GLY GLY GLU CYS GLY GLU GLU VAL SEQRES 4 A 338 HIS GLU SER LEU ARG LEU THR PHE HIS ASP ALA ILE GLY SEQRES 5 A 338 PHE SER PRO ALA LEU THR ARG GLN GLY LYS PHE GLY GLY SEQRES 6 A 338 GLY GLY ALA ASP GLY SER ILE MET LEU PHE SER ASP ILE SEQRES 7 A 338 GLU THR ASN PHE ALA ALA ASN ASN GLY VAL ASP ASP ILE SEQRES 8 A 338 VAL GLU GLN GLN LYS PRO ILE ALA ILE LYS HIS GLN VAL SEQRES 9 A 338 SER PHE GLY ASP PHE ILE GLN PHE ALA GLY ALA VAL GLY SEQRES 10 A 338 SER SER ASN CYS ALA GLY GLY PRO ARG ILE GLN PHE LEU SEQRES 11 A 338 ALA GLY ARG SER ASN VAL THR LYS PRO SER PRO ASP HIS SEQRES 12 A 338 LEU VAL PRO GLU PRO PHE ASP SER VAL THR SER ILE LEU SEQRES 13 A 338 ALA ARG MET GLY ASP ALA GLY PHE LYS PRO ASP GLU VAL SEQRES 14 A 338 VAL ALA LEU LEU ALA SER HIS SER VAL ALA ALA GLN ASP SEQRES 15 A 338 THR ILE ASP PRO LYS LEU ALA GLY HIS PRO PHE ASP SER SEQRES 16 A 338 THR PRO SER ASP PHE ASP SER GLN PHE PHE VAL GLU THR SEQRES 17 A 338 LEU LEU LYS GLY THR LEU ILE PRO GLY ASP SER LEU HIS SEQRES 18 A 338 LYS GLY GLN VAL LYS SER PRO LEU PRO GLY GLU PHE ARG SEQRES 19 A 338 LEU GLN SER ASP GLU LEU LEU ALA ARG ASP SER ARG THR SEQRES 20 A 338 SER CYS GLU TRP GLN SER PHE ILE SER ASN PRO ASN SER SEQRES 21 A 338 MET VAL PRO LYS PHE GLU ARG ALA MET ALA LYS MET ALA SEQRES 22 A 338 THR LEU GLY GLN ASN PRO LYS LYS LEU ILE ASP CYS SER SEQRES 23 A 338 GLU VAL ILE PRO VAL PRO ARG GLY ARG VAL LYS GLN PRO SEQRES 24 A 338 THR LEU PRO ALA GLY LYS THR ILE LYS ASP ILE GLU ALA SEQRES 25 A 338 SER CYS ARG LYS ALA PRO PHE PRO ARG LEU PRO THR ASP SEQRES 26 A 338 LYS GLY THR PHE THR SER ILE LEU PRO VAL PRO SER SER HET CA A 401 1 HET CA A 402 1 HET HEM A 500 43 HET SO4 A1339 5 HET SO4 A1340 5 HET SO4 A1341 5 HET SO4 A1342 5 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM SO4 SULFATE ION HETNAM CA CALCIUM ION HETSYN HEM HEME FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 SO4 4(O4 S 2-) FORMUL 4 CA 2(CA 2+) FORMUL 5 HOH *485(H2 O) HELIX 1 1 CYS A 4 ARG A 8 5 5 HELIX 2 2 ASN A 12 ALA A 14 5 3 HELIX 3 3 CYS A 15 ASN A 28 1 14 HELIX 4 4 GLY A 36 ILE A 51 1 16 HELIX 5 5 SER A 54 GLN A 60 1 7 HELIX 6 6 GLY A 70 PHE A 75 1 6 HELIX 7 7 PHE A 75 THR A 80 1 6 HELIX 8 8 ASN A 81 ASN A 86 5 6 HELIX 9 9 VAL A 88 GLN A 103 1 16 HELIX 10 10 SER A 105 ASN A 120 1 16 HELIX 11 11 SER A 151 GLY A 163 1 13 HELIX 12 12 LYS A 165 LEU A 173 1 9 HELIX 13 13 ALA A 174 ALA A 179 5 6 HELIX 14 14 ASP A 185 ALA A 189 5 5 HELIX 15 15 SER A 202 THR A 208 1 7 HELIX 16 16 GLN A 236 ASP A 244 1 9 HELIX 17 17 THR A 247 ASN A 257 1 11 HELIX 18 18 SER A 260 ALA A 273 1 14 HELIX 19 19 ASN A 278 LEU A 282 5 5 HELIX 20 20 SER A 286 ILE A 289 5 4 HELIX 21 21 THR A 306 ASP A 309 5 4 SHEET 1 AA 2 LEU A 130 ALA A 131 0 SHEET 2 AA 2 ILE A 283 ASP A 284 -1 O ILE A 283 N ALA A 131 SHEET 1 AB 2 GLN A 224 VAL A 225 0 SHEET 2 AB 2 ARG A 234 LEU A 235 -1 O ARG A 234 N VAL A 225 SSBOND 1 CYS A 4 CYS A 16 1555 1555 2.04 SSBOND 2 CYS A 15 CYS A 285 1555 1555 2.03 SSBOND 3 CYS A 35 CYS A 121 1555 1555 2.04 SSBOND 4 CYS A 249 CYS A 314 1555 1555 2.03 LINK CA CA A 401 O HOH A2099 1555 1555 2.41 LINK CA CA A 401 OD1 ASP A 49 1555 1555 2.34 LINK CA CA A 401 OD1 ASP A 69 1555 1555 2.43 LINK CA CA A 401 OG SER A 71 1555 1555 2.52 LINK CA CA A 401 O HOH A2093 1555 1555 2.44 LINK CA CA A 401 O ASP A 49 1555 1555 2.48 LINK CA CA A 401 O GLY A 67 1555 1555 2.43 LINK CA CA A 402 OD2 ASP A 194 1555 1555 2.42 LINK CA CA A 402 OD1 ASP A 194 1555 1555 2.77 LINK CA CA A 402 O SER A 177 1555 1555 2.29 LINK CA CA A 402 OG SER A 177 1555 1555 2.48 LINK CA CA A 402 O THR A 196 1555 1555 2.37 LINK CA CA A 402 OG1 THR A 196 1555 1555 2.57 LINK CA CA A 402 O ASP A 199 1555 1555 2.43 LINK CA CA A 402 OD1 ASP A 201 1555 1555 2.50 LINK FE HEM A 500 NE2 HIS A 176 1555 1555 2.22 SITE 1 AC1 6 ASP A 49 GLY A 67 ASP A 69 SER A 71 SITE 2 AC1 6 HOH A2093 HOH A2099 SITE 1 AC2 5 SER A 177 ASP A 194 THR A 196 ASP A 199 SITE 2 AC2 5 ASP A 201 SITE 1 AC3 21 HIS A 40 ARG A 44 PHE A 47 GLU A 147 SITE 2 AC3 21 PRO A 148 LEU A 172 LEU A 173 SER A 175 SITE 3 AC3 21 HIS A 176 ALA A 179 ALA A 180 GLN A 181 SITE 4 AC3 21 ASP A 182 THR A 183 ILE A 184 PHE A 193 SITE 5 AC3 21 LEU A 235 SER A 237 MET A 269 HOH A2077 SITE 6 AC3 21 HOH A2086 SITE 1 AC4 5 ASN A 12 ILE A 283 ASP A 284 HOH A2026 SITE 2 AC4 5 HOH A2399 SITE 1 AC5 7 ASP A 185 LYS A 187 ASP A 218 SER A 219 SITE 2 AC5 7 HIS A 221 HOH A2289 HOH A2329 SITE 1 AC6 4 ASP A 325 LYS A 326 HOH A2459 HOH A2480 SITE 1 AC7 3 LYS A 101 LYS A 316 THR A 328 CRYST1 123.670 86.560 40.030 90.00 107.64 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008086 0.000000 0.002571 0.00000 SCALE2 0.000000 0.011553 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026214 0.00000 MASTER 499 0 7 21 4 0 16 6 0 0 0 26 END