HEADER CHAPERONE 03-MAY-12 4ASW TITLE STRUCTURE OF THE COMPLEX BETWEEN THE N-TERMINAL DIMERISATION DOMAIN OF TITLE 2 SGT2 AND THE UBL DOMAIN OF GET5 CAVEAT 4ASW ASN C 17 HAS WRONG CHIRALITY AT ATOM CA ALA C 19 HAS WRONG CAVEAT 2 4ASW CHIRALITY AT ATOM CA COMPND MOL_ID: 1; COMPND 2 MOLECULE: SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONTAINING COMPND 3 PROTEIN 2; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: DIMERISATION DOMAIN, RESIDUES 1-78; COMPND 6 SYNONYM: SGT2_NT, SGT/UBP, VIRAL PROTEIN U-BINDING PROTEIN; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: UBIQUITIN-LIKE PROTEIN MDY2; COMPND 10 CHAIN: C; COMPND 11 FRAGMENT: RESIDUES 70-152; COMPND 12 SYNONYM: GOLGI TO ER TRAFFIC PROTEIN 5, MATING-DEFICIENT PROTEIN 2, COMPND 13 TRANSLATION MACHINERY-ASSOCIATED PROTEIN 24, GET5, GET; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET46; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET46-SGT2_NT; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 14 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 15 ORGANISM_TAXID: 4932; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 21 EXPRESSION_SYSTEM_VECTOR: PET46; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PET46-SGT2_NT KEYWDS CHAPERONE, TAIL-ANCHORED, POST-TRANSLATIONAL TARGETING EXPDTA SOLUTION NMR NUMMDL 9 AUTHOR A.C.SIMON,P.J.SIMPSON,R.M.GOLDSTONE,E.M.KRYSZTOFINSKA,J.W.MURRAY, AUTHOR 2 S.HIGH,R.L.ISAACSON REVDAT 5 23-JUN-21 4ASW 1 CAVEAT REMARK ATOM REVDAT 4 30-NOV-16 4ASW 1 TITLE REMARK ATOM TER REVDAT 4 2 1 MASTER REVDAT 3 27-FEB-13 4ASW 1 JRNL REVDAT 2 30-JAN-13 4ASW 1 JRNL REVDAT 1 16-JAN-13 4ASW 0 JRNL AUTH A.C.SIMON,P.J.SIMPSON,R.M.GOLDSTONE,E.M.KRYSZTOFINSKA, JRNL AUTH 2 J.W.MURRAY,S.HIGH,R.L.ISAACSON JRNL TITL STRUCTURE OF THE SGT2/GET5 COMPLEX PROVIDES INSIGHTS INTO JRNL TITL 2 GET-MEDIATED TARGETING OF TAIL-ANCHORED MEMBRANE PROTEINS JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 1327 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23297211 JRNL DOI 10.1073/PNAS.1207518110 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA REMARK 3 AUTHORS : BARDIAUX B,MALLIAVIN T,NILGES M REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BMRB 18342 REMARK 4 REMARK 4 4ASW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1290052002. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303.0 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 250 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 90% WATER/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 600; 800 REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW REMARK 210 METHOD USED : ARIA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 9 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NONE REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-9 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 VAL A 9 REMARK 465 ASP A 10 REMARK 465 ASP A 11 REMARK 465 ASP A 12 REMARK 465 ASP A 13 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 VAL B 9 REMARK 465 ASP B 10 REMARK 465 ASP B 11 REMARK 465 ASP B 12 REMARK 465 ASP B 13 REMARK 465 ASP C 16 REMARK 465 PRO C 98 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME; REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 470 MODELS 1-9 REMARK 470 RES CSSEQI ATOMS REMARK 470 ASN C 17 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 42 HZ1 LYS C 70 1.57 REMARK 500 OD1 ASP B 52 HZ1 LYS C 68 1.58 REMARK 500 HZ2 LYS B 36 OE1 GLU B 38 1.58 REMARK 500 H2 MET B 14 OE2 GLU B 73 1.58 REMARK 500 HZ3 LYS A 19 OE2 GLU B 38 1.59 REMARK 500 HH21 ARG A 62 OE1 GLU A 63 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 15 -74.87 -76.32 REMARK 500 1 SER A 16 -14.48 -142.54 REMARK 500 1 GLU A 91 54.78 -93.66 REMARK 500 1 SER B 16 -164.76 65.94 REMARK 500 1 ALA C 19 91.46 -65.75 REMARK 500 1 PHE C 38 -168.92 -114.18 REMARK 500 2 SER A 16 18.36 -145.19 REMARK 500 2 LYS A 75 107.38 -57.84 REMARK 500 2 SER B 16 99.18 67.56 REMARK 500 2 ALA B 17 95.81 -49.99 REMARK 500 2 SER B 87 54.23 -112.99 REMARK 500 2 ALA C 19 66.39 124.62 REMARK 500 2 SER C 58 -55.01 -120.86 REMARK 500 2 ASN C 75 30.83 -85.96 REMARK 500 3 SER A 16 -35.37 -150.85 REMARK 500 3 PHE A 74 34.64 -93.62 REMARK 500 3 MET B 15 94.03 -61.79 REMARK 500 3 SER B 16 75.61 61.35 REMARK 500 3 ALA B 17 100.34 -41.66 REMARK 500 3 LYS B 37 70.35 43.70 REMARK 500 3 GLU B 73 44.61 -80.65 REMARK 500 3 ALA C 19 87.78 -66.88 REMARK 500 3 SER C 58 -63.99 -122.52 REMARK 500 4 SER A 16 -15.26 -150.45 REMARK 500 4 GLU A 73 44.22 -88.46 REMARK 500 4 SER B 16 89.94 50.92 REMARK 500 4 ALA B 86 97.13 -64.12 REMARK 500 4 ALA C 18 -91.02 -97.13 REMARK 500 4 LYS C 68 87.40 62.29 REMARK 500 4 LYS C 82 45.26 -81.45 REMARK 500 4 MET C 93 68.20 -109.54 REMARK 500 5 MET A 15 -77.34 -65.60 REMARK 500 5 SER A 16 -33.72 -150.93 REMARK 500 5 PHE A 74 41.05 -78.96 REMARK 500 5 SER B 16 99.81 64.76 REMARK 500 5 ALA B 17 97.30 -42.98 REMARK 500 5 PHE B 74 22.84 -145.12 REMARK 500 5 ALA C 19 87.23 -66.56 REMARK 500 6 GLU A 38 36.03 -92.10 REMARK 500 6 PHE A 74 39.41 -82.43 REMARK 500 6 ALA A 86 96.80 -69.03 REMARK 500 6 SER B 16 101.12 62.95 REMARK 500 6 ALA B 17 103.70 -59.61 REMARK 500 6 LYS B 37 67.14 60.91 REMARK 500 6 ALA C 19 65.15 164.98 REMARK 500 6 LYS C 68 73.53 59.31 REMARK 500 7 SER A 16 -36.09 -146.30 REMARK 500 7 SER B 16 104.65 64.54 REMARK 500 7 LYS B 37 82.90 61.93 REMARK 500 7 ALA C 19 86.29 -68.14 REMARK 500 REMARK 500 THIS ENTRY HAS 69 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4A20 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE UBL DOMAIN OF MDY2 (GET5) AT 1.78A REMARK 900 RELATED ID: 4ASV RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF THE N-TERMINAL DIMERISATION DOMAIN OF SGT2 REMARK 900 RELATED ID: 18342 RELATED DB: BMRB DBREF 4ASW A 15 92 UNP Q12118 SGT2_YEAST 1 78 DBREF 4ASW B 15 92 UNP Q12118 SGT2_YEAST 1 78 DBREF 4ASW C 16 98 UNP Q12285 MDY2_YEAST 70 152 SEQADV 4ASW MET A 1 UNP Q12118 EXPRESSION TAG SEQADV 4ASW ALA A 2 UNP Q12118 EXPRESSION TAG SEQADV 4ASW HIS A 3 UNP Q12118 EXPRESSION TAG SEQADV 4ASW HIS A 4 UNP Q12118 EXPRESSION TAG SEQADV 4ASW HIS A 5 UNP Q12118 EXPRESSION TAG SEQADV 4ASW HIS A 6 UNP Q12118 EXPRESSION TAG SEQADV 4ASW HIS A 7 UNP Q12118 EXPRESSION TAG SEQADV 4ASW HIS A 8 UNP Q12118 EXPRESSION TAG SEQADV 4ASW VAL A 9 UNP Q12118 EXPRESSION TAG SEQADV 4ASW ASP A 10 UNP Q12118 EXPRESSION TAG SEQADV 4ASW ASP A 11 UNP Q12118 EXPRESSION TAG SEQADV 4ASW ASP A 12 UNP Q12118 EXPRESSION TAG SEQADV 4ASW ASP A 13 UNP Q12118 EXPRESSION TAG SEQADV 4ASW MET A 14 UNP Q12118 EXPRESSION TAG SEQADV 4ASW MET B 1 UNP Q12118 EXPRESSION TAG SEQADV 4ASW ALA B 2 UNP Q12118 EXPRESSION TAG SEQADV 4ASW HIS B 3 UNP Q12118 EXPRESSION TAG SEQADV 4ASW HIS B 4 UNP Q12118 EXPRESSION TAG SEQADV 4ASW HIS B 5 UNP Q12118 EXPRESSION TAG SEQADV 4ASW HIS B 6 UNP Q12118 EXPRESSION TAG SEQADV 4ASW HIS B 7 UNP Q12118 EXPRESSION TAG SEQADV 4ASW HIS B 8 UNP Q12118 EXPRESSION TAG SEQADV 4ASW VAL B 9 UNP Q12118 EXPRESSION TAG SEQADV 4ASW ASP B 10 UNP Q12118 EXPRESSION TAG SEQADV 4ASW ASP B 11 UNP Q12118 EXPRESSION TAG SEQADV 4ASW ASP B 12 UNP Q12118 EXPRESSION TAG SEQADV 4ASW ASP B 13 UNP Q12118 EXPRESSION TAG SEQADV 4ASW MET B 14 UNP Q12118 EXPRESSION TAG SEQRES 1 A 92 MET ALA HIS HIS HIS HIS HIS HIS VAL ASP ASP ASP ASP SEQRES 2 A 92 MET MET SER ALA SER LYS GLU GLU ILE ALA ALA LEU ILE SEQRES 3 A 92 VAL ASN TYR PHE SER SER ILE VAL GLU LYS LYS GLU ILE SEQRES 4 A 92 SER GLU ASP GLY ALA ASP SER LEU ASN VAL ALA MET ASP SEQRES 5 A 92 CYS ILE SER GLU ALA PHE GLY PHE GLU ARG GLU ALA VAL SEQRES 6 A 92 SER GLY ILE LEU GLY LYS SER GLU PHE LYS GLY GLN HIS SEQRES 7 A 92 LEU ALA ASP ILE LEU ASN SER ALA SER ARG VAL PRO GLU SEQRES 8 A 92 SER SEQRES 1 B 92 MET ALA HIS HIS HIS HIS HIS HIS VAL ASP ASP ASP ASP SEQRES 2 B 92 MET MET SER ALA SER LYS GLU GLU ILE ALA ALA LEU ILE SEQRES 3 B 92 VAL ASN TYR PHE SER SER ILE VAL GLU LYS LYS GLU ILE SEQRES 4 B 92 SER GLU ASP GLY ALA ASP SER LEU ASN VAL ALA MET ASP SEQRES 5 B 92 CYS ILE SER GLU ALA PHE GLY PHE GLU ARG GLU ALA VAL SEQRES 6 B 92 SER GLY ILE LEU GLY LYS SER GLU PHE LYS GLY GLN HIS SEQRES 7 B 92 LEU ALA ASP ILE LEU ASN SER ALA SER ARG VAL PRO GLU SEQRES 8 B 92 SER SEQRES 1 C 83 ASP ASN ALA ALA VAL HIS LEU THR LEU LYS LYS ILE GLN SEQRES 2 C 83 ALA PRO LYS PHE SER ILE GLU HIS ASP PHE SER PRO SER SEQRES 3 C 83 ASP THR ILE LEU GLN ILE LYS GLN HIS LEU ILE SER GLU SEQRES 4 C 83 GLU LYS ALA SER HIS ILE SER GLU ILE LYS LEU LEU LEU SEQRES 5 C 83 LYS GLY LYS VAL LEU HIS ASP ASN LEU PHE LEU SER ASP SEQRES 6 C 83 LEU LYS VAL THR PRO ALA ASN SER THR ILE THR VAL MET SEQRES 7 C 83 ILE LYS PRO ASN PRO HELIX 1 1 SER A 18 LYS A 36 1 19 HELIX 2 2 SER A 40 GLY A 59 1 20 HELIX 3 3 GLU A 61 GLU A 63 5 3 HELIX 4 4 ALA A 64 SER A 72 1 9 HELIX 5 5 HIS A 78 SER A 85 1 8 HELIX 6 6 SER B 18 GLU B 35 1 18 HELIX 7 7 SER B 40 GLY B 59 1 20 HELIX 8 8 GLU B 61 GLU B 63 5 3 HELIX 9 9 ALA B 64 SER B 72 1 9 HELIX 10 10 HIS B 78 ALA B 86 1 9 HELIX 11 11 THR C 43 GLU C 54 1 12 HELIX 12 12 HIS C 59 SER C 61 5 3 HELIX 13 13 LEU C 78 LEU C 81 5 4 SHEET 1 CA 5 SER C 33 ASP C 37 0 SHEET 2 CA 5 HIS C 21 LYS C 26 -1 O LEU C 22 N HIS C 36 SHEET 3 CA 5 THR C 89 ILE C 94 1 O ILE C 90 N LYS C 25 SHEET 4 CA 5 ILE C 63 LEU C 67 -1 O LYS C 64 N MET C 93 SHEET 5 CA 5 LYS C 70 LEU C 72 -1 O LYS C 70 N LEU C 67 CISPEP 1 ALA C 29 PRO C 30 1 -0.47 CISPEP 2 ALA C 29 PRO C 30 2 0.30 CISPEP 3 ALA C 29 PRO C 30 3 -0.26 CISPEP 4 ALA C 29 PRO C 30 4 -1.11 CISPEP 5 ALA C 29 PRO C 30 5 -0.43 CISPEP 6 ALA C 29 PRO C 30 6 -0.35 CISPEP 7 ALA C 29 PRO C 30 7 -0.48 CISPEP 8 ALA C 29 PRO C 30 8 -0.96 CISPEP 9 ALA C 29 PRO C 30 9 -0.65 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL ENDMDL MASTER 197 0 0 13 5 0 0 6 0 0 0 23 END