HEADER VIRUS 18-JUL-11 3ZUE TITLE RABBIT HEMORRHAGIC DISEASE VIRUS (RHDV)CAPSID PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID STRUCTURAL PROTEIN VP60; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: VP1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RABBIT HEMORRHAGIC DISEASE VIRUS; SOURCE 3 ORGANISM_TAXID: 11976; SOURCE 4 STRAIN: AST89; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: H5; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS CAGE DESIGN, MOLECULAR SWITCH, PROTEIN ENGINEERING, VIRUS, STRUCTURAL KEYWDS 2 POLYMORPHISM, VIRUS ASSEMBLY EXPDTA ELECTRON MICROSCOPY MDLTYP CA ATOMS ONLY, CHAIN A, B, C AUTHOR D.LUQUE,J.M.GONZALEZ,J.GOMEZ-BLANCO,R.MARABINI,J.CHICHON,I.MENA, AUTHOR 2 I.ANGULO,J.L.CARRASCOSA,N.VERDAGUER,B.L.TRUS,J.BARCENA,J.R.CASTON REVDAT 3 03-OCT-18 3ZUE 1 REMARK REVDAT 2 06-JUN-12 3ZUE 1 JRNL REVDAT 1 23-MAY-12 3ZUE 0 JRNL AUTH D.LUQUE,J.M.GONZALEZ,J.GOMEZ-BLANCO,R.MARABINI,J.CHICHON, JRNL AUTH 2 I.MENA,I.ANGULO,J.L.CARRASCOSA,N.VERDAGUER,B.L.TRUS, JRNL AUTH 3 J.BARCENA,J.R.CASTON JRNL TITL EPITOPE INSERTION AT THE N-TERMINAL MOLECULAR SWITCH OF THE JRNL TITL 2 RABBIT HEMORRHAGIC DISEASE VIRUS T=3 CAPSID PROTEIN LEADS TO JRNL TITL 3 LARGER T=4 CAPSIDS. JRNL REF J.VIROL. V. 86 6470 2012 JRNL REFN ISSN 0022-538X JRNL PMID 22491457 JRNL DOI 10.1128/JVI.07050-11 REMARK 2 REMARK 2 RESOLUTION. 10.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : XMIPP REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : OTHER REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : METHOD--CORRELATION REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 2.800 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 10.30 REMARK 3 NUMBER OF PARTICLES : 5011 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD REMARK 3 -1933 (DEPOSITION ID: 10153). REMARK 4 REMARK 4 3ZUE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE. REMARK 100 THE DEPOSITION ID IS D_1290049063. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : WT RABBIT HEMORRHAGIC DISEASE REMARK 245 VIRUS VLP REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : HOLEY CARBON REMARK 245 SAMPLE VITRIFICATION DETAILS : LIQUID ETHANE REMARK 245 SAMPLE BUFFER : 200 MM NA2HPO4, 200 MM NACL REMARK 245 PH : 6.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TECNAI F20 REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.26 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 10.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 50000 REMARK 245 CALIBRATED MAGNIFICATION : 50000 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 2 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 2 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 3 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 3 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 3 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 4 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 4 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 4 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 5 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 5 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 5 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 6 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 6 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 6 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 8 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 8 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 8 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 9 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 9 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 9 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 10 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 10 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 10 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 11 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 11 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 11 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 12 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 12 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 12 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 13 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 13 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 13 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 14 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 14 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 14 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 15 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 15 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 15 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 16 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 16 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 16 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 17 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 17 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 17 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 18 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 18 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 18 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 19 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 19 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 20 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 20 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 20 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 21 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 21 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 21 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 22 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 22 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 23 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 23 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 23 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 24 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 24 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 24 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 25 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 25 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 25 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 26 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 26 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 26 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 27 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 27 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 27 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 28 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 28 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 28 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 29 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 29 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 29 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 30 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 30 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 30 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 31 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 31 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 31 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 32 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 32 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 32 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 33 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 33 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 33 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 34 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 34 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 34 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 35 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 35 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 35 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 36 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 36 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 36 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 37 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 37 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 37 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 38 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 38 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 38 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 39 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 39 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 39 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 40 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 40 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 40 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 41 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 41 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 41 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 42 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 42 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 42 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 43 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 43 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 43 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 44 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 44 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 44 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 45 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 45 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 45 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 46 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 46 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 46 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 47 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 47 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 47 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 48 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 48 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 48 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 49 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 49 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 49 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 50 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 50 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 50 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 51 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 51 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 51 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 52 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 52 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 52 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 53 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 53 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 53 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 54 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 54 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 54 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 55 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 55 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 55 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 56 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 56 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 56 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 57 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 57 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 57 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 58 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 58 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 58 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 59 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 59 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 59 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 60 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 60 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 60 -0.500000 -0.809017 -0.309017 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 GLY A 3 REMARK 465 LYS A 4 REMARK 465 ALA A 5 REMARK 465 ARG A 6 REMARK 465 THR A 7 REMARK 465 ALA A 8 REMARK 465 PRO A 9 REMARK 465 GLN A 10 REMARK 465 GLY A 11 REMARK 465 GLU A 12 REMARK 465 ALA A 13 REMARK 465 ALA A 14 REMARK 465 GLY A 15 REMARK 465 THR A 16 REMARK 465 ALA A 17 REMARK 465 THR A 18 REMARK 465 THR A 19 REMARK 465 ALA A 20 REMARK 465 SER A 21 REMARK 465 VAL A 22 REMARK 465 PRO A 23 REMARK 465 GLY A 24 REMARK 465 THR A 25 REMARK 465 ALA A 573 REMARK 465 ASN A 574 REMARK 465 GLY A 575 REMARK 465 PHE A 576 REMARK 465 SER A 577 REMARK 465 TYR A 578 REMARK 465 VAL A 579 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 GLY B 3 REMARK 465 LYS B 4 REMARK 465 ALA B 5 REMARK 465 ARG B 6 REMARK 465 THR B 7 REMARK 465 ALA B 8 REMARK 465 PRO B 9 REMARK 465 GLN B 10 REMARK 465 GLY B 11 REMARK 465 GLU B 12 REMARK 465 ALA B 13 REMARK 465 ALA B 14 REMARK 465 GLY B 15 REMARK 465 THR B 16 REMARK 465 ALA B 17 REMARK 465 THR B 18 REMARK 465 THR B 19 REMARK 465 ALA B 20 REMARK 465 SER B 21 REMARK 465 VAL B 22 REMARK 465 PRO B 23 REMARK 465 GLY B 24 REMARK 465 THR B 25 REMARK 465 THR B 26 REMARK 465 THR B 27 REMARK 465 ASP B 28 REMARK 465 GLY B 29 REMARK 465 ALA B 573 REMARK 465 ASN B 574 REMARK 465 GLY B 575 REMARK 465 PHE B 576 REMARK 465 SER B 577 REMARK 465 TYR B 578 REMARK 465 VAL B 579 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 GLY C 3 REMARK 465 LYS C 4 REMARK 465 ALA C 5 REMARK 465 ARG C 6 REMARK 465 THR C 7 REMARK 465 ALA C 8 REMARK 465 PRO C 9 REMARK 465 GLN C 10 REMARK 465 GLY C 11 REMARK 465 GLU C 12 REMARK 465 ALA C 13 REMARK 465 ALA C 14 REMARK 465 GLY C 15 REMARK 465 THR C 16 REMARK 465 ALA C 17 REMARK 465 THR C 18 REMARK 465 THR C 19 REMARK 465 ALA C 20 REMARK 465 SER C 21 REMARK 465 VAL C 22 REMARK 465 PRO C 23 REMARK 465 GLY C 24 REMARK 465 THR C 25 REMARK 465 ALA C 573 REMARK 465 ASN C 574 REMARK 465 GLY C 575 REMARK 465 PHE C 576 REMARK 465 SER C 577 REMARK 465 TYR C 578 REMARK 465 VAL C 579 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-1933 RELATED DB: EMDB REMARK 900 WT RABBIT HEMORRHAGIC DISEASE VIRUS (RHDV)CAPSID DBREF 3ZUE A 1 579 UNP Q9YND5 Q9YND5_RHDV 1 579 DBREF 3ZUE B 1 579 UNP Q9YND5 Q9YND5_RHDV 1 579 DBREF 3ZUE C 1 579 UNP Q9YND5 Q9YND5_RHDV 1 579 SEQRES 1 A 579 MET GLU GLY LYS ALA ARG THR ALA PRO GLN GLY GLU ALA SEQRES 2 A 579 ALA GLY THR ALA THR THR ALA SER VAL PRO GLY THR THR SEQRES 3 A 579 THR ASP GLY LEU ASP PRO GLY VAL VAL ALA THR THR SER SEQRES 4 A 579 VAL VAL THR ALA GLU ASN SER SER ALA SER ILE ALA THR SEQRES 5 A 579 ALA GLY ILE GLY GLY PRO PRO GLN GLN VAL ASP GLN GLN SEQRES 6 A 579 GLU THR TRP ARG THR ASN PHE TYR TYR ASN ASP VAL PHE SEQRES 7 A 579 THR TRP SER VAL ALA ASP ALA PRO GLY SER ILE LEU TYR SEQRES 8 A 579 THR VAL GLN HIS SER PRO GLN ASN ASN PRO PHE THR ALA SEQRES 9 A 579 VAL LEU SER GLN MET TYR ALA GLY TRP ALA GLY GLY MET SEQRES 10 A 579 GLN PHE ARG PHE ILE VAL ALA GLY SER GLY VAL PHE GLY SEQRES 11 A 579 GLY ARG LEU VAL ALA ALA VAL ILE PRO PRO GLY ILE GLU SEQRES 12 A 579 ILE GLY PRO GLY LEU GLU VAL ARG GLN PHE PRO HIS VAL SEQRES 13 A 579 VAL ILE ASP ALA ARG SER LEU GLU PRO VAL THR ASN THR SEQRES 14 A 579 MET PRO ASP LEU ARG PRO ASN MET TYR HIS PRO THR GLY SEQRES 15 A 579 ASP PRO GLY LEU VAL PRO THR LEU VAL LEU SER VAL TYR SEQRES 16 A 579 ASN ASN LEU ILE ASN PRO PHE GLY GLY SER THR SER ALA SEQRES 17 A 579 ILE GLN VAL THR VAL GLU THR ARG PRO SER GLU ASP PHE SEQRES 18 A 579 GLU PHE VAL MET ILE ARG ALA PRO SER SER LYS THR VAL SEQRES 19 A 579 ASP SER ILE SER PRO ALA GLY LEU LEU THR THR PRO VAL SEQRES 20 A 579 LEU THR GLY VAL GLY ASN ASP ASN ARG TRP ASN GLY GLN SEQRES 21 A 579 ILE VAL GLY LEU GLN PRO VAL PRO GLY GLY PHE SER THR SEQRES 22 A 579 CYS ASN ARG HIS TRP ASN LEU ASN GLY SER THR TYR GLY SEQRES 23 A 579 TRP SER SER PRO ARG PHE ALA ASP ILE ASP HIS ARG ARG SEQRES 24 A 579 GLY SER ALA SER TYR PRO GLY ASN ASN ALA THR ASN VAL SEQRES 25 A 579 LEU GLN PHE TRP TYR ALA ASN ALA GLY SER ALA VAL ASP SEQRES 26 A 579 ASN PRO ILE SER GLN VAL ALA PRO ASP GLY PHE PRO ASP SEQRES 27 A 579 MET SER PHE VAL PRO PHE ASN GLY PRO GLY ILE PRO ALA SEQRES 28 A 579 ALA GLY TRP VAL GLY PHE GLY ALA ILE TRP ASN SER ASN SEQRES 29 A 579 SER GLY ALA PRO ASN VAL THR THR VAL GLN ALA TYR GLU SEQRES 30 A 579 LEU GLY PHE ALA THR GLY ALA PRO GLY ASN LEU GLN PRO SEQRES 31 A 579 THR THR ASN THR SER GLY ALA GLN THR VAL ALA LYS SER SEQRES 32 A 579 ILE TYR ALA VAL VAL THR GLY THR ALA GLN ASN PRO ALA SEQRES 33 A 579 GLY LEU PHE VAL MET ALA SER GLY VAL ILE SER THR PRO SEQRES 34 A 579 ASN ALA ASN ALA ILE THR TYR THR PRO GLN PRO ASP ARG SEQRES 35 A 579 ILE VAL THR THR PRO GLY THR PRO ALA ALA ALA PRO VAL SEQRES 36 A 579 GLY LYS ASN THR PRO ILE MET PHE ALA SER VAL VAL ARG SEQRES 37 A 579 ARG THR GLY ASP VAL ASN ALA THR ALA GLY SER ALA SER SEQRES 38 A 579 GLY THR GLN TYR GLY THR GLY SER GLN PRO LEU PRO VAL SEQRES 39 A 579 THR ILE GLY LEU SER LEU ASN ASN TYR SER SER SER LEU SEQRES 40 A 579 MET PRO GLY GLN PHE PHE VAL TRP GLN LEU THR PHE ALA SEQRES 41 A 579 SER GLY PHE MET GLU ILE GLY LEU SER VAL ASP GLY TYR SEQRES 42 A 579 PHE TYR ALA GLY THR GLY ALA LEU THR THR LEU ILE ASP SEQRES 43 A 579 LEU THR GLU LEU ILE ASP VAL ARG PRO VAL GLY PRO ARG SEQRES 44 A 579 PRO SER LYS SER THR LEU VAL PHE ASN LEU GLY GLY THR SEQRES 45 A 579 ALA ASN GLY PHE SER TYR VAL SEQRES 1 B 579 MET GLU GLY LYS ALA ARG THR ALA PRO GLN GLY GLU ALA SEQRES 2 B 579 ALA GLY THR ALA THR THR ALA SER VAL PRO GLY THR THR SEQRES 3 B 579 THR ASP GLY LEU ASP PRO GLY VAL VAL ALA THR THR SER SEQRES 4 B 579 VAL VAL THR ALA GLU ASN SER SER ALA SER ILE ALA THR SEQRES 5 B 579 ALA GLY ILE GLY GLY PRO PRO GLN GLN VAL ASP GLN GLN SEQRES 6 B 579 GLU THR TRP ARG THR ASN PHE TYR TYR ASN ASP VAL PHE SEQRES 7 B 579 THR TRP SER VAL ALA ASP ALA PRO GLY SER ILE LEU TYR SEQRES 8 B 579 THR VAL GLN HIS SER PRO GLN ASN ASN PRO PHE THR ALA SEQRES 9 B 579 VAL LEU SER GLN MET TYR ALA GLY TRP ALA GLY GLY MET SEQRES 10 B 579 GLN PHE ARG PHE ILE VAL ALA GLY SER GLY VAL PHE GLY SEQRES 11 B 579 GLY ARG LEU VAL ALA ALA VAL ILE PRO PRO GLY ILE GLU SEQRES 12 B 579 ILE GLY PRO GLY LEU GLU VAL ARG GLN PHE PRO HIS VAL SEQRES 13 B 579 VAL ILE ASP ALA ARG SER LEU GLU PRO VAL THR ASN THR SEQRES 14 B 579 MET PRO ASP LEU ARG PRO ASN MET TYR HIS PRO THR GLY SEQRES 15 B 579 ASP PRO GLY LEU VAL PRO THR LEU VAL LEU SER VAL TYR SEQRES 16 B 579 ASN ASN LEU ILE ASN PRO PHE GLY GLY SER THR SER ALA SEQRES 17 B 579 ILE GLN VAL THR VAL GLU THR ARG PRO SER GLU ASP PHE SEQRES 18 B 579 GLU PHE VAL MET ILE ARG ALA PRO SER SER LYS THR VAL SEQRES 19 B 579 ASP SER ILE SER PRO ALA GLY LEU LEU THR THR PRO VAL SEQRES 20 B 579 LEU THR GLY VAL GLY ASN ASP ASN ARG TRP ASN GLY GLN SEQRES 21 B 579 ILE VAL GLY LEU GLN PRO VAL PRO GLY GLY PHE SER THR SEQRES 22 B 579 CYS ASN ARG HIS TRP ASN LEU ASN GLY SER THR TYR GLY SEQRES 23 B 579 TRP SER SER PRO ARG PHE ALA ASP ILE ASP HIS ARG ARG SEQRES 24 B 579 GLY SER ALA SER TYR PRO GLY ASN ASN ALA THR ASN VAL SEQRES 25 B 579 LEU GLN PHE TRP TYR ALA ASN ALA GLY SER ALA VAL ASP SEQRES 26 B 579 ASN PRO ILE SER GLN VAL ALA PRO ASP GLY PHE PRO ASP SEQRES 27 B 579 MET SER PHE VAL PRO PHE ASN GLY PRO GLY ILE PRO ALA SEQRES 28 B 579 ALA GLY TRP VAL GLY PHE GLY ALA ILE TRP ASN SER ASN SEQRES 29 B 579 SER GLY ALA PRO ASN VAL THR THR VAL GLN ALA TYR GLU SEQRES 30 B 579 LEU GLY PHE ALA THR GLY ALA PRO GLY ASN LEU GLN PRO SEQRES 31 B 579 THR THR ASN THR SER GLY ALA GLN THR VAL ALA LYS SER SEQRES 32 B 579 ILE TYR ALA VAL VAL THR GLY THR ALA GLN ASN PRO ALA SEQRES 33 B 579 GLY LEU PHE VAL MET ALA SER GLY VAL ILE SER THR PRO SEQRES 34 B 579 ASN ALA ASN ALA ILE THR TYR THR PRO GLN PRO ASP ARG SEQRES 35 B 579 ILE VAL THR THR PRO GLY THR PRO ALA ALA ALA PRO VAL SEQRES 36 B 579 GLY LYS ASN THR PRO ILE MET PHE ALA SER VAL VAL ARG SEQRES 37 B 579 ARG THR GLY ASP VAL ASN ALA THR ALA GLY SER ALA SER SEQRES 38 B 579 GLY THR GLN TYR GLY THR GLY SER GLN PRO LEU PRO VAL SEQRES 39 B 579 THR ILE GLY LEU SER LEU ASN ASN TYR SER SER SER LEU SEQRES 40 B 579 MET PRO GLY GLN PHE PHE VAL TRP GLN LEU THR PHE ALA SEQRES 41 B 579 SER GLY PHE MET GLU ILE GLY LEU SER VAL ASP GLY TYR SEQRES 42 B 579 PHE TYR ALA GLY THR GLY ALA LEU THR THR LEU ILE ASP SEQRES 43 B 579 LEU THR GLU LEU ILE ASP VAL ARG PRO VAL GLY PRO ARG SEQRES 44 B 579 PRO SER LYS SER THR LEU VAL PHE ASN LEU GLY GLY THR SEQRES 45 B 579 ALA ASN GLY PHE SER TYR VAL SEQRES 1 C 579 MET GLU GLY LYS ALA ARG THR ALA PRO GLN GLY GLU ALA SEQRES 2 C 579 ALA GLY THR ALA THR THR ALA SER VAL PRO GLY THR THR SEQRES 3 C 579 THR ASP GLY LEU ASP PRO GLY VAL VAL ALA THR THR SER SEQRES 4 C 579 VAL VAL THR ALA GLU ASN SER SER ALA SER ILE ALA THR SEQRES 5 C 579 ALA GLY ILE GLY GLY PRO PRO GLN GLN VAL ASP GLN GLN SEQRES 6 C 579 GLU THR TRP ARG THR ASN PHE TYR TYR ASN ASP VAL PHE SEQRES 7 C 579 THR TRP SER VAL ALA ASP ALA PRO GLY SER ILE LEU TYR SEQRES 8 C 579 THR VAL GLN HIS SER PRO GLN ASN ASN PRO PHE THR ALA SEQRES 9 C 579 VAL LEU SER GLN MET TYR ALA GLY TRP ALA GLY GLY MET SEQRES 10 C 579 GLN PHE ARG PHE ILE VAL ALA GLY SER GLY VAL PHE GLY SEQRES 11 C 579 GLY ARG LEU VAL ALA ALA VAL ILE PRO PRO GLY ILE GLU SEQRES 12 C 579 ILE GLY PRO GLY LEU GLU VAL ARG GLN PHE PRO HIS VAL SEQRES 13 C 579 VAL ILE ASP ALA ARG SER LEU GLU PRO VAL THR ASN THR SEQRES 14 C 579 MET PRO ASP LEU ARG PRO ASN MET TYR HIS PRO THR GLY SEQRES 15 C 579 ASP PRO GLY LEU VAL PRO THR LEU VAL LEU SER VAL TYR SEQRES 16 C 579 ASN ASN LEU ILE ASN PRO PHE GLY GLY SER THR SER ALA SEQRES 17 C 579 ILE GLN VAL THR VAL GLU THR ARG PRO SER GLU ASP PHE SEQRES 18 C 579 GLU PHE VAL MET ILE ARG ALA PRO SER SER LYS THR VAL SEQRES 19 C 579 ASP SER ILE SER PRO ALA GLY LEU LEU THR THR PRO VAL SEQRES 20 C 579 LEU THR GLY VAL GLY ASN ASP ASN ARG TRP ASN GLY GLN SEQRES 21 C 579 ILE VAL GLY LEU GLN PRO VAL PRO GLY GLY PHE SER THR SEQRES 22 C 579 CYS ASN ARG HIS TRP ASN LEU ASN GLY SER THR TYR GLY SEQRES 23 C 579 TRP SER SER PRO ARG PHE ALA ASP ILE ASP HIS ARG ARG SEQRES 24 C 579 GLY SER ALA SER TYR PRO GLY ASN ASN ALA THR ASN VAL SEQRES 25 C 579 LEU GLN PHE TRP TYR ALA ASN ALA GLY SER ALA VAL ASP SEQRES 26 C 579 ASN PRO ILE SER GLN VAL ALA PRO ASP GLY PHE PRO ASP SEQRES 27 C 579 MET SER PHE VAL PRO PHE ASN GLY PRO GLY ILE PRO ALA SEQRES 28 C 579 ALA GLY TRP VAL GLY PHE GLY ALA ILE TRP ASN SER ASN SEQRES 29 C 579 SER GLY ALA PRO ASN VAL THR THR VAL GLN ALA TYR GLU SEQRES 30 C 579 LEU GLY PHE ALA THR GLY ALA PRO GLY ASN LEU GLN PRO SEQRES 31 C 579 THR THR ASN THR SER GLY ALA GLN THR VAL ALA LYS SER SEQRES 32 C 579 ILE TYR ALA VAL VAL THR GLY THR ALA GLN ASN PRO ALA SEQRES 33 C 579 GLY LEU PHE VAL MET ALA SER GLY VAL ILE SER THR PRO SEQRES 34 C 579 ASN ALA ASN ALA ILE THR TYR THR PRO GLN PRO ASP ARG SEQRES 35 C 579 ILE VAL THR THR PRO GLY THR PRO ALA ALA ALA PRO VAL SEQRES 36 C 579 GLY LYS ASN THR PRO ILE MET PHE ALA SER VAL VAL ARG SEQRES 37 C 579 ARG THR GLY ASP VAL ASN ALA THR ALA GLY SER ALA SER SEQRES 38 C 579 GLY THR GLN TYR GLY THR GLY SER GLN PRO LEU PRO VAL SEQRES 39 C 579 THR ILE GLY LEU SER LEU ASN ASN TYR SER SER SER LEU SEQRES 40 C 579 MET PRO GLY GLN PHE PHE VAL TRP GLN LEU THR PHE ALA SEQRES 41 C 579 SER GLY PHE MET GLU ILE GLY LEU SER VAL ASP GLY TYR SEQRES 42 C 579 PHE TYR ALA GLY THR GLY ALA LEU THR THR LEU ILE ASP SEQRES 43 C 579 LEU THR GLU LEU ILE ASP VAL ARG PRO VAL GLY PRO ARG SEQRES 44 C 579 PRO SER LYS SER THR LEU VAL PHE ASN LEU GLY GLY THR SEQRES 45 C 579 ALA ASN GLY PHE SER TYR VAL CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 383 0 0 0 0 0 0 6 0 0 0 135 END