HEADER CELL CYCLE 23-NOV-12 3ZCW TITLE EG5 - NEW ALLOSTERIC BINDING SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: KINESIN-LIKE PROTEIN KIF11; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MOTOR DOMAIN, RESIDUES 16-363; COMPND 5 SYNONYM: KINESIN-LIKE PROTEIN 1, KINESIN-LIKE SPINDLE PROTEIN HKSP, COMPND 6 KINESIN-RELATED MOTOR PROTEIN EG5, THYROID RECEPTOR-INTERACTING COMPND 7 PROTEIN 5, TR-INTERACTING PROTEIN 5, TRIP-5; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODON PLUS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET M20 KEYWDS CELL CYCLE, INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR V.ULAGANATHAN,S.K.TALAPATRA,F.KOZIELSKI,A.D.PANNIFER REVDAT 3 27-FEB-13 3ZCW 1 JRNL REVDAT 2 30-JAN-13 3ZCW 1 TITLE REVDAT 1 23-JAN-13 3ZCW 0 JRNL AUTH V.ULAGANATHAN,S.K.TALAPATRA,O.RATH,A.D.PANNIFER,D.D.HACKNEY, JRNL AUTH 2 F.KOZIELSKI JRNL TITL STRUCTURAL INSIGHTS INTO A UNIQUE INHIBITOR BINDING POCKET JRNL TITL 2 IN KINESIN SPINDLE PROTEIN. JRNL REF J.AM.CHEM.SOC. V. 135 2263 2013 JRNL REFN ISSN 0002-7863 JRNL PMID 23305346 JRNL DOI 10.1021/JA310377D REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.691 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.468 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.34 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.03 REMARK 3 NUMBER OF REFLECTIONS : 49418 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.1960 REMARK 3 R VALUE (WORKING SET) : 0.1941 REMARK 3 FREE R VALUE : 0.2328 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.1 REMARK 3 FREE R VALUE TEST SET COUNT : 2504 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.4721 - 4.4264 0.97 2646 136 0.1700 0.1668 REMARK 3 2 4.4264 - 3.5155 0.97 2612 115 0.1538 0.1974 REMARK 3 3 3.5155 - 3.0717 0.99 2638 129 0.1653 0.1890 REMARK 3 4 3.0717 - 2.7911 0.99 2619 138 0.1755 0.2483 REMARK 3 5 2.7911 - 2.5912 0.99 2621 136 0.1819 0.2614 REMARK 3 6 2.5912 - 2.4385 1.00 2617 162 0.1772 0.2304 REMARK 3 7 2.4385 - 2.3164 1.00 2593 144 0.1867 0.2191 REMARK 3 8 2.3164 - 2.2157 0.99 2581 154 0.2799 0.3309 REMARK 3 9 2.2157 - 2.1304 0.99 2609 141 0.1987 0.2649 REMARK 3 10 2.1304 - 2.0569 0.99 2623 126 0.1849 0.2141 REMARK 3 11 2.0569 - 1.9926 1.00 2621 137 0.1793 0.2224 REMARK 3 12 1.9926 - 1.9357 0.99 2607 135 0.2476 0.2507 REMARK 3 13 1.9357 - 1.8847 0.99 2578 139 0.3546 0.4028 REMARK 3 14 1.8847 - 1.8387 0.99 2592 143 0.2646 0.2724 REMARK 3 15 1.8387 - 1.7969 0.99 2609 148 0.2441 0.3036 REMARK 3 16 1.7969 - 1.7587 1.00 2649 135 0.2554 0.3142 REMARK 3 17 1.7587 - 1.7235 0.99 2556 142 0.2712 0.2817 REMARK 3 18 1.7235 - 1.6910 0.98 2543 144 0.3007 0.2991 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.348 REMARK 3 B_SOL : 47.812 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.45 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.64 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.5704 REMARK 3 B22 (A**2) : -0.0374 REMARK 3 B33 (A**2) : 2.6078 REMARK 3 B12 (A**2) : 0.0000 REMARK 3 B13 (A**2) : -3.1160 REMARK 3 B23 (A**2) : 0.0000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2743 REMARK 3 ANGLE : 1.414 3750 REMARK 3 CHIRALITY : 0.092 435 REMARK 3 PLANARITY : 0.006 469 REMARK 3 DIHEDRAL : 15.965 1071 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3ZCW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-NOV-12. REMARK 100 THE PDBE ID CODE IS EBI-54881. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979500 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD (QUANTUM 315R) REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49475 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.69 REMARK 200 RESOLUTION RANGE LOW (A) : 36.96 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.9 REMARK 200 R MERGE (I) : 0.08 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.30 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.9 REMARK 200 R MERGE FOR SHELL (I) : 0.66 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.00 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2WOG REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 2MM MAGNESIUM REMARK 280 CHLORIDE, 100MM HEPES PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.97000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.44500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.97000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.44500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2032 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2194 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2203 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2448 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 16 REMARK 465 LYS A 17 REMARK 465 LEU A 57 REMARK 465 ALA A 58 REMARK 465 PRO A 174 REMARK 465 SER A 175 REMARK 465 SER A 176 REMARK 465 ASP A 177 REMARK 465 VAL A 178 REMARK 465 SER A 179 REMARK 465 GLU A 180 REMARK 465 ARG A 181 REMARK 465 ILE A 272 REMARK 465 GLY A 273 REMARK 465 ARG A 274 REMARK 465 SER A 275 REMARK 465 GLY A 276 REMARK 465 ALA A 277 REMARK 465 VAL A 278 REMARK 465 ASP A 279 REMARK 465 LYS A 280 REMARK 465 ARG A 281 REMARK 465 ALA A 282 REMARK 465 ARG A 283 REMARK 465 GLU A 284 REMARK 465 ALA A 285 REMARK 465 GLY A 286 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 GLU A 153 CD OE1 OE2 REMARK 470 LYS A 157 CE NZ REMARK 470 GLN A 183 CD OE1 NE2 REMARK 470 ARG A 189 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 191 CG CD CE NZ REMARK 470 ILE A 288 CD1 REMARK 470 ARG A 327 CD NE CZ NH1 NH2 REMARK 470 GLU A 344 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN A 98 OG1 THR A 328 2.08 REMARK 500 OE2 GLU A 128 O HOH A 2227 2.20 REMARK 500 OE2 GLU A 166 O HOH A 2269 2.20 REMARK 500 N LEU A 182 O HOH A 2273 2.13 REMARK 500 O1S EPE A 1368 O HOH A 2340 2.18 REMARK 500 O1 PEG A 1369 O HOH A 2448 2.02 REMARK 500 O1 PEG A 1369 O HOH A 2391 1.88 REMARK 500 O HOH A 2013 O HOH A 2016 2.14 REMARK 500 O HOH A 2024 O HOH A 2025 2.01 REMARK 500 O HOH A 2038 O HOH A 2046 1.92 REMARK 500 O HOH A 2059 O HOH A 2116 1.99 REMARK 500 O HOH A 2071 O HOH A 2073 1.67 REMARK 500 O HOH A 2090 O HOH A 2109 1.84 REMARK 500 O HOH A 2094 O HOH A 2326 2.11 REMARK 500 O HOH A 2096 O HOH A 2326 2.12 REMARK 500 O HOH A 2100 O HOH A 2101 2.16 REMARK 500 O HOH A 2118 O HOH A 2434 2.03 REMARK 500 O HOH A 2155 O HOH A 2166 2.19 REMARK 500 O HOH A 2163 O HOH A 2168 2.16 REMARK 500 O HOH A 2193 O HOH A 2380 2.18 REMARK 500 O HOH A 2203 O HOH A 2444 2.05 REMARK 500 O HOH A 2203 O HOH A 2445 1.97 REMARK 500 O HOH A 2206 O HOH A 2207 1.85 REMARK 500 O HOH A 2227 O HOH A 2240 2.06 REMARK 500 O HOH A 2248 O HOH A 2254 2.14 REMARK 500 O HOH A 2266 O HOH A 2269 2.01 REMARK 500 O HOH A 2272 O HOH A 2286 2.12 REMARK 500 O HOH A 2278 O HOH A 2319 2.12 REMARK 500 O HOH A 2284 O HOH A 2285 2.07 REMARK 500 O HOH A 2286 O HOH A 2287 1.94 REMARK 500 O HOH A 2291 O HOH A 2293 2.07 REMARK 500 O HOH A 2291 O HOH A 2292 2.01 REMARK 500 O HOH A 2296 O HOH A 2297 2.07 REMARK 500 O HOH A 2391 O HOH A 2448 2.18 REMARK 500 O HOH A 2395 O HOH A 2399 2.03 REMARK 500 O HOH A 2417 O HOH A 2420 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O1 PEG A 1369 O HOH A 2448 2555 2.02 REMARK 500 O HOH A 2029 O HOH A 2214 2556 2.14 REMARK 500 O HOH A 2055 O HOH A 2142 2556 2.19 REMARK 500 O HOH A 2193 O HOH A 2193 2555 2.06 REMARK 500 O HOH A 2203 O HOH A 2445 2555 1.97 REMARK 500 O HOH A 2203 O HOH A 2444 2555 2.05 REMARK 500 O HOH A 2391 O HOH A 2448 2555 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 60 -43.59 -159.67 REMARK 500 ASN A 190 104.63 -162.17 REMARK 500 THR A 249 170.23 -56.31 REMARK 500 PRO A 310 46.48 -78.07 REMARK 500 ASN A 358 85.38 38.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEG A 1369 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1365 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2186 O REMARK 620 2 HOH A2345 O 87.7 REMARK 620 3 THR A 112 OG1 83.5 170.6 REMARK 620 4 ADP A1364 O3B 93.5 91.5 92.4 REMARK 620 5 HOH A2185 O 171.8 96.9 91.3 93.1 REMARK 620 6 HOH A2187 O 86.5 86.7 89.4 178.2 87.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A1364 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1365 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 4A2 A1366 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 4A2 A1367 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A1368 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A1369 DBREF 3ZCW A 16 363 UNP P52732 KIF11_HUMAN 16 363 SEQRES 1 A 348 GLY LYS ASN ILE GLN VAL VAL VAL ARG CYS ARG PRO PHE SEQRES 2 A 348 ASN LEU ALA GLU ARG LYS ALA SER ALA HIS SER ILE VAL SEQRES 3 A 348 GLU CYS ASP PRO VAL ARG LYS GLU VAL SER VAL ARG THR SEQRES 4 A 348 GLY GLY LEU ALA ASP LYS SER SER ARG LYS THR TYR THR SEQRES 5 A 348 PHE ASP MET VAL PHE GLY ALA SER THR LYS GLN ILE ASP SEQRES 6 A 348 VAL TYR ARG SER VAL VAL CYS PRO ILE LEU ASP GLU VAL SEQRES 7 A 348 ILE MET GLY TYR ASN CYS THR ILE PHE ALA TYR GLY GLN SEQRES 8 A 348 THR GLY THR GLY LYS THR PHE THR MET GLU GLY GLU ARG SEQRES 9 A 348 SER PRO ASN GLU GLU TYR THR TRP GLU GLU ASP PRO LEU SEQRES 10 A 348 ALA GLY ILE ILE PRO ARG THR LEU HIS GLN ILE PHE GLU SEQRES 11 A 348 LYS LEU THR ASP ASN GLY THR GLU PHE SER VAL LYS VAL SEQRES 12 A 348 SER LEU LEU GLU ILE TYR ASN GLU GLU LEU PHE ASP LEU SEQRES 13 A 348 LEU ASN PRO SER SER ASP VAL SER GLU ARG LEU GLN MET SEQRES 14 A 348 PHE ASP ASP PRO ARG ASN LYS ARG GLY VAL ILE ILE LYS SEQRES 15 A 348 GLY LEU GLU GLU ILE THR VAL HIS ASN LYS ASP GLU VAL SEQRES 16 A 348 TYR GLN ILE LEU GLU LYS GLY ALA ALA LYS ARG THR THR SEQRES 17 A 348 ALA ALA THR LEU MET ASN ALA TYR SER SER ARG SER HIS SEQRES 18 A 348 SER VAL PHE SER VAL THR ILE HIS MET LYS GLU THR THR SEQRES 19 A 348 ILE ASP GLY GLU GLU LEU VAL LYS ILE GLY LYS LEU ASN SEQRES 20 A 348 LEU VAL ASP LEU ALA GLY SER GLU ASN ILE GLY ARG SER SEQRES 21 A 348 GLY ALA VAL ASP LYS ARG ALA ARG GLU ALA GLY ASN ILE SEQRES 22 A 348 ASN GLN SER LEU LEU THR LEU GLY ARG VAL ILE THR ALA SEQRES 23 A 348 LEU VAL GLU ARG THR PRO HIS VAL PRO TYR ARG GLU SER SEQRES 24 A 348 LYS LEU THR ARG ILE LEU GLN ASP SER LEU GLY GLY ARG SEQRES 25 A 348 THR ARG THR SER ILE ILE ALA THR ILE SER PRO ALA SER SEQRES 26 A 348 LEU ASN LEU GLU GLU THR LEU SER THR LEU GLU TYR ALA SEQRES 27 A 348 HIS ARG ALA LYS ASN ILE LEU ASN LYS PRO HET ADP A1364 27 HET MG A1365 1 HET 4A2 A1366 33 HET 4A2 A1367 33 HET EPE A1368 15 HET PEG A1369 4 HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE HETNAM 2 EPE ETHANESULFONIC ACID HETNAM 4A2 (2E)-2-(3-FLUORANYL-4-METHOXY-PHENYL)IMINO-1- HETNAM 2 4A2 [[2-(TRIFLUOROMETHYL)PHENYL]METHYL]-3H- HETNAM 3 4A2 BENZIMIDAZOLE-5-CARBOXYLIC ACID HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EPE HEPES FORMUL 2 EPE C8 H18 N2 O4 S FORMUL 3 4A2 2(C23 H17 F4 N3 O3) FORMUL 4 ADP C10 H15 N5 O10 P2 FORMUL 5 MG MG 2+ FORMUL 6 PEG C4 H10 O3 FORMUL 7 HOH *450(H2 O) HELIX 1 1 ASN A 29 ALA A 35 1 7 HELIX 2 2 LYS A 77 MET A 95 1 19 HELIX 3 3 GLY A 110 GLU A 116 1 7 HELIX 4 4 SER A 120 GLU A 124 5 5 HELIX 5 5 GLY A 134 ASP A 149 1 16 HELIX 6 6 ASN A 206 ALA A 224 1 19 HELIX 7 7 ALA A 225 ARG A 234 1 10 HELIX 8 8 ASN A 289 ARG A 305 1 17 HELIX 9 9 PRO A 310 GLU A 313 5 4 HELIX 10 10 SER A 314 GLN A 321 1 8 HELIX 11 11 ASP A 322 LEU A 324 5 3 HELIX 12 12 ASN A 342 ASN A 358 1 17 SHEET 1 AA 8 MET A 70 PHE A 72 0 SHEET 2 AA 8 ILE A 19 CYS A 25 1 O VAL A 23 N PHE A 72 SHEET 3 AA 8 THR A 330 ILE A 336 1 O THR A 330 N GLN A 20 SHEET 4 AA 8 ASN A 98 GLY A 105 1 O THR A 100 N SER A 331 SHEET 5 AA 8 GLU A 254 ASP A 265 1 O LYS A 260 N CYS A 99 SHEET 6 AA 8 HIS A 236 THR A 248 -1 O SER A 237 N ASP A 265 SHEET 7 AA 8 GLU A 153 TYR A 164 -1 O GLU A 153 N LYS A 246 SHEET 8 AA 8 GLU A 167 ASP A 170 -1 O GLU A 167 N TYR A 164 SHEET 1 AB 8 MET A 70 PHE A 72 0 SHEET 2 AB 8 ILE A 19 CYS A 25 1 O VAL A 23 N PHE A 72 SHEET 3 AB 8 THR A 330 ILE A 336 1 O THR A 330 N GLN A 20 SHEET 4 AB 8 ASN A 98 GLY A 105 1 O THR A 100 N SER A 331 SHEET 5 AB 8 GLU A 254 ASP A 265 1 O LYS A 260 N CYS A 99 SHEET 6 AB 8 HIS A 236 THR A 248 -1 O SER A 237 N ASP A 265 SHEET 7 AB 8 GLU A 153 TYR A 164 -1 O GLU A 153 N LYS A 246 SHEET 8 AB 8 ILE A 202 THR A 203 -1 O ILE A 202 N VAL A 158 SHEET 1 AC 2 GLU A 167 ASP A 170 0 SHEET 2 AC 2 GLU A 153 TYR A 164 -1 O GLU A 162 N PHE A 169 SHEET 1 AD 3 VAL A 41 ASP A 44 0 SHEET 2 AD 3 GLU A 49 ARG A 53 -1 O GLU A 49 N ASP A 44 SHEET 3 AD 3 ARG A 63 THR A 67 -1 O LYS A 64 N VAL A 52 SHEET 1 AE 2 GLN A 183 ASP A 186 0 SHEET 2 AE 2 VAL A 194 LYS A 197 -1 O ILE A 195 N PHE A 185 LINK O3B ADP A1364 MG MG A1365 1555 1555 2.00 LINK MG MG A1365 O HOH A2187 1555 1555 2.21 LINK MG MG A1365 O HOH A2345 1555 1555 2.09 LINK MG MG A1365 OG1 THR A 112 1555 1555 2.12 LINK MG MG A1365 O HOH A2185 1555 1555 2.09 LINK MG MG A1365 O HOH A2186 1555 1555 2.20 SITE 1 AC1 26 ARG A 26 PRO A 27 LEU A 30 LYS A 34 SITE 2 AC1 26 GLN A 106 THR A 107 GLY A 108 THR A 109 SITE 3 AC1 26 GLY A 110 LYS A 111 THR A 112 PHE A 113 SITE 4 AC1 26 GLU A 118 MG A1365 HOH A2010 HOH A2014 SITE 5 AC1 26 HOH A2048 HOH A2182 HOH A2185 HOH A2186 SITE 6 AC1 26 HOH A2196 HOH A2345 HOH A2438 HOH A2439 SITE 7 AC1 26 HOH A2440 HOH A2442 SITE 1 AC2 6 THR A 112 ADP A1364 HOH A2185 HOH A2186 SITE 2 AC2 6 HOH A2187 HOH A2345 SITE 1 AC3 21 TYR A 104 SER A 269 GLU A 270 ASN A 287 SITE 2 AC3 21 ILE A 288 ASN A 289 LEU A 292 LEU A 293 SITE 3 AC3 21 LEU A 295 GLY A 296 ARG A 297 ILE A 299 SITE 4 AC3 21 THR A 300 ILE A 332 TYR A 352 ARG A 355 SITE 5 AC3 21 PEG A1369 HOH A2384 HOH A2432 HOH A2443 SITE 6 AC3 21 HOH A2445 SITE 1 AC4 22 GLU A 116 ILE A 136 LEU A 160 LEU A 171 SITE 2 AC4 22 ILE A 213 LEU A 214 LYS A 216 GLY A 217 SITE 3 AC4 22 ALA A 218 LYS A 220 ARG A 221 MET A 228 SITE 4 AC4 22 ASN A 229 PHE A 239 EPE A1368 HOH A2192 SITE 5 AC4 22 HOH A2276 HOH A2277 HOH A2278 HOH A2323 SITE 6 AC4 22 HOH A2446 HOH A2447 SITE 1 AC5 9 GLU A 162 TYR A 164 PHE A 169 MET A 228 SITE 2 AC5 9 TYR A 231 SER A 232 4A2 A1367 HOH A2264 SITE 3 AC5 9 HOH A2340 SITE 1 AC6 8 THR A 300 GLU A 304 ARG A 355 4A2 A1366 SITE 2 AC6 8 HOH A2390 HOH A2391 HOH A2444 HOH A2448 CRYST1 107.940 62.890 75.050 90.00 117.46 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009264 0.000000 0.004815 0.00000 SCALE2 0.000000 0.015901 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015016 0.00000 MASTER 405 0 6 12 23 0 26 6 0 0 0 27 END