HEADER HYDROLASE 29-SEP-11 3U13 TITLE CRYSTAL STRUCTURE OF DE NOVO DESIGN OF CYSTEIN ESTERASE ECH13 AT THE TITLE 2 RESOLUTION 1.6A, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET OR51 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARTIFICIAL PROTEIN OR51; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 5',3'-NUCLEOTIDASE, MITOCHONDRIAL, DEOXY-5'-NUCLEOTIDASE 2, COMPND 5 DNT-2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET29B+ KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, ECH13, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.KUZIN,M.SU,J.SEETHARAMAN,S.SAHDEV,R.XIAO,E.KOHAN,F.RICHTER, AUTHOR 2 J.K.EVERETT,T.B.ACTON,D.BAKER,G.T.MONTELIONE,J.F.HUNT,L.TONG, AUTHOR 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 2 11-DEC-13 3U13 1 JRNL REVDAT 1 23-NOV-11 3U13 0 JRNL AUTH F.RICHTER,R.BLOMBERG,S.D.KHARE,G.KISS,A.P.KUZIN,A.J.SMITH, JRNL AUTH 2 J.GALLAHER,Z.PIANOWSKI,R.C.HELGESON,A.GRJASNOW,R.XIAO, JRNL AUTH 3 J.SEETHARAMAN,M.SU,S.VOROBIEV,S.LEW,F.FOROUHAR, JRNL AUTH 4 G.J.KORNHABER,J.F.HUNT,G.T.MONTELIONE,L.TONG,K.N.HOUK, JRNL AUTH 5 D.HILVERT,D.BAKER JRNL TITL COMPUTATIONAL DESIGN OF CATALYTIC DYADS AND OXYANION HOLES JRNL TITL 2 FOR ESTER HYDROLYSIS. JRNL REF J.AM.CHEM.SOC. V. 134 16197 2012 JRNL REFN ISSN 0002-7863 JRNL PMID 22871159 JRNL DOI 10.1021/JA3037367 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.2_869) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 38618 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1932 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.0434 - 3.8522 0.99 2829 138 0.1918 0.1841 REMARK 3 2 3.8522 - 3.0587 1.00 2678 149 0.1656 0.1704 REMARK 3 3 3.0587 - 2.6723 1.00 2665 133 0.1817 0.2118 REMARK 3 4 2.6723 - 2.4281 1.00 2648 134 0.1857 0.1914 REMARK 3 5 2.4281 - 2.2542 1.00 2618 138 0.1727 0.2186 REMARK 3 6 2.2542 - 2.1213 1.00 2630 120 0.1695 0.1797 REMARK 3 7 2.1213 - 2.0151 1.00 2601 139 0.1654 0.1684 REMARK 3 8 2.0151 - 1.9274 1.00 2568 155 0.1693 0.1937 REMARK 3 9 1.9274 - 1.8532 1.00 2575 157 0.1646 0.1882 REMARK 3 10 1.8532 - 1.7893 1.00 2585 118 0.1777 0.2102 REMARK 3 11 1.7893 - 1.7333 1.00 2590 131 0.1843 0.2495 REMARK 3 12 1.7333 - 1.6838 1.00 2572 145 0.1963 0.2095 REMARK 3 13 1.6838 - 1.6395 1.00 2570 135 0.2191 0.2441 REMARK 3 14 1.6395 - 1.5995 1.00 2557 140 0.2442 0.2402 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 50.23 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.70800 REMARK 3 B22 (A**2) : -0.70800 REMARK 3 B33 (A**2) : 1.41610 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1688 REMARK 3 ANGLE : 1.214 2295 REMARK 3 CHIRALITY : 0.082 240 REMARK 3 PLANARITY : 0.005 300 REMARK 3 DIHEDRAL : 11.839 645 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: all REMARK 3 ORIGIN FOR THE GROUP (A): -2.7591 20.2865 18.8419 REMARK 3 T TENSOR REMARK 3 T11: 0.1015 T22: 0.1158 REMARK 3 T33: 0.0887 T12: -0.0142 REMARK 3 T13: 0.0298 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 2.2193 L22: 1.6243 REMARK 3 L33: 1.1478 L12: -0.1720 REMARK 3 L13: -0.4426 L23: -0.3777 REMARK 3 S TENSOR REMARK 3 S11: 0.0379 S12: -0.0624 S13: 0.0949 REMARK 3 S21: 0.0156 S22: -0.0130 S23: -0.1523 REMARK 3 S31: -0.1052 S32: 0.0698 S33: -0.0227 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3U13 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-SEP-11. REMARK 100 THE RCSB ID CODE IS RCSB068172. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : RH COATED FLAT MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72527 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.600 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 48.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.90 REMARK 200 R MERGE FOR SHELL (I) : 0.53900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: PDB ENTRY 1Q92 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 100MM NACL, 5MM DTT, REMARK 280 0.02% NAN3, 10MM TRIS-HCL (PH 7.5) . RESERVOIR SOLUTION:0.1M REMARK 280 NAHPO4, 0.1M MES, PEG 20K 12%, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277KK REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.54150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.71800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.71800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 78.81225 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.71800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.71800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 26.27075 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.71800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.71800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 78.81225 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.71800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.71800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 26.27075 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 52.54150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS INDICATE THE BIOLOGICAL UNIT AS A TRIMER OF 61.03 REMARK 300 KD AT 96.3% REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 52.54150 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 441 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 GLY A 2 REMARK 465 CYS A 198 REMARK 465 GLY A 199 REMARK 465 SER A 200 REMARK 465 LEU A 201 REMARK 465 GLU A 202 REMARK 465 HIS A 203 REMARK 465 HIS A 204 REMARK 465 HIS A 205 REMARK 465 HIS A 206 REMARK 465 HIS A 207 REMARK 465 HIS A 208 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 12 -60.79 -101.46 REMARK 500 HIS A 103 -158.90 64.43 REMARK 500 LYS A 104 42.47 -96.96 REMARK 500 PRO A 177 40.16 -101.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1003 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PO4 A 209 O2 REMARK 620 2 ASP A 146 OD1 170.0 REMARK 620 3 ASP A 13 O 99.7 89.3 REMARK 620 4 ASP A 11 OD2 108.3 76.1 88.7 REMARK 620 5 HOH A 271 O 82.7 89.0 172.7 84.0 REMARK 620 6 HOH A 377 O 103.4 74.7 74.1 146.1 112.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 211 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 212 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Q92 RELATED DB: PDB REMARK 900 95% HOMOLOGY REMARK 900 RELATED ID: OR51 RELATED DB: TARGETDB DBREF 3U13 A 1 208 PDB 3U13 3U13 1 208 SEQRES 1 A 208 MSE GLY GLY ARG ALA LEU ARG VAL LEU VAL ASP MSE ASP SEQRES 2 A 208 GLY VAL LEU ALA ASP VAL GLU GLY GLY LEU LEU ARG LYS SEQRES 3 A 208 PHE ARG ALA ARG PHE PRO ASP GLN PRO PHE ILE ALA LEU SEQRES 4 A 208 GLU ASP ARG ARG GLY TYR LYS ALA CYS GLU GLN TYR GLY SEQRES 5 A 208 ARG LEU ARG PRO GLY LEU SER GLU LYS ALA ARG SER ILE SEQRES 6 A 208 ALA GLU SER LYS ASN PHE PHE PHE GLU LEU GLU PRO LEU SEQRES 7 A 208 PRO GLY ALA VAL GLU ALA VAL LYS GLU MSE ALA SER LEU SEQRES 8 A 208 GLN ASN THR ASP VAL PHE ILE CYS THR SER PRO HIS LYS SEQRES 9 A 208 MSE PHE LYS TYR CYS PRO TYR GLU LYS TYR ALA TRP VAL SEQRES 10 A 208 GLU LYS TYR PHE GLY PRO ASP PHE LEU GLU GLN ILE VAL SEQRES 11 A 208 LEU THR ARG ASP LYS THR VAL VAL SER ALA ASP LEU LEU SEQRES 12 A 208 ILE ASP ASP ARG PRO ASP ILE THR GLY ALA GLU PRO THR SEQRES 13 A 208 PRO SER TRP GLU HIS VAL LEU PHE THR ALA CYS HIS ASN SEQRES 14 A 208 GLN HIS LEU GLN LEU GLN PRO PRO ARG ARG ARG LEU HIS SEQRES 15 A 208 SER TRP ALA ASP ASP TRP LYS ALA ILE LEU ASP SER LYS SEQRES 16 A 208 ARG PRO CYS GLY SER LEU GLU HIS HIS HIS HIS HIS HIS MODRES 3U13 MSE A 12 MET SELENOMETHIONINE MODRES 3U13 MSE A 88 MET SELENOMETHIONINE MODRES 3U13 MSE A 105 MET SELENOMETHIONINE HET MSE A 12 8 HET MSE A 88 8 HET MSE A 105 8 HET PO4 A 209 5 HET MG A1003 1 HET PO4 A 210 5 HET PEG A 211 7 HET NA A 212 1 HETNAM MSE SELENOMETHIONINE HETNAM PO4 PHOSPHATE ION HETNAM MG MAGNESIUM ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM NA SODIUM ION FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 2 PO4 2(O4 P 3-) FORMUL 3 MG MG 2+ FORMUL 5 PEG C4 H10 O3 FORMUL 6 NA NA 1+ FORMUL 7 HOH *248(H2 O) HELIX 1 1 ASP A 18 PHE A 31 1 14 HELIX 2 2 ALA A 38 ARG A 42 5 5 HELIX 3 3 LYS A 46 ARG A 55 1 10 HELIX 4 4 GLY A 57 GLU A 67 1 11 HELIX 5 5 GLY A 80 LEU A 91 1 12 HELIX 6 6 TYR A 108 GLY A 122 1 15 HELIX 7 7 PRO A 123 GLU A 127 5 5 HELIX 8 8 ASP A 187 SER A 194 1 8 SHEET 1 A 6 ILE A 129 LEU A 131 0 SHEET 2 A 6 THR A 94 THR A 100 1 N ILE A 98 O VAL A 130 SHEET 3 A 6 LEU A 6 VAL A 10 1 N LEU A 6 O ASP A 95 SHEET 4 A 6 LEU A 142 ASP A 145 1 O LEU A 142 N LEU A 9 SHEET 5 A 6 GLU A 160 PHE A 164 1 O VAL A 162 N LEU A 143 SHEET 6 A 6 ARG A 179 LEU A 181 1 O ARG A 179 N LEU A 163 LINK C ASP A 11 N MSE A 12 1555 1555 1.31 LINK C MSE A 12 N ASP A 13 1555 1555 1.32 LINK C GLU A 87 N MSE A 88 1555 1555 1.33 LINK C MSE A 88 N ALA A 89 1555 1555 1.33 LINK C LYS A 104 N MSE A 105 1555 1555 1.33 LINK C MSE A 105 N PHE A 106 1555 1555 1.33 LINK MG MG A1003 O2 PO4 A 209 1555 1555 2.34 LINK OD1 ASP A 146 MG MG A1003 1555 1555 2.36 LINK O ASP A 13 MG MG A1003 1555 1555 2.40 LINK OD2 ASP A 11 MG MG A1003 1555 1555 2.45 LINK MG MG A1003 O HOH A 271 1555 1555 2.52 LINK MG MG A1003 O HOH A 377 1555 1555 2.92 LINK NA NA A 212 O HOH A 259 1555 1555 3.15 CISPEP 1 GLY A 3 ARG A 4 0 -2.30 CISPEP 2 PRO A 176 PRO A 177 0 5.05 SITE 1 AC1 7 ASP A 11 ASP A 13 TYR A 45 ASP A 146 SITE 2 AC1 7 PO4 A 209 HOH A 271 HOH A 377 SITE 1 AC2 11 ASP A 11 MSE A 12 ASP A 13 TYR A 45 SITE 2 AC2 11 THR A 100 SER A 101 HIS A 103 LYS A 113 SITE 3 AC2 11 LYS A 135 HOH A 388 MG A1003 SITE 1 AC3 8 GLU A 67 MSE A 105 TYR A 108 HIS A 182 SITE 2 AC3 8 SER A 183 ASP A 186 PEG A 211 NA A 212 SITE 1 AC4 9 LYS A 104 MSE A 105 PHE A 106 GLU A 118 SITE 2 AC4 9 PRO A 123 LEU A 126 HIS A 182 PO4 A 210 SITE 3 AC4 9 HOH A 321 SITE 1 AC5 5 MSE A 105 LYS A 107 TYR A 108 CYS A 109 SITE 2 AC5 5 PO4 A 210 CRYST1 73.436 73.436 105.083 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013617 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013617 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009516 0.00000 MASTER 333 0 8 8 6 0 12 6 0 0 0 16 END