HEADER HYDROLASE 26-SEP-11 3TYP TITLE THE CRYSTAL STRUCTURE OF THE INORGANIC TRIPHOSPHATASE NE1496 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NITROSOMONAS EUROPAEA; SOURCE 3 ORGANISM_TAXID: 915; SOURCE 4 GENE: NE1496; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET15B KEYWDS INORGANIC TRIPHOSPHATASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.V.LUNIN,T.SKARINA,O.ONOPRIYENKO,T.A.BINKOWSKI,A.JOACHIMIAK, AUTHOR 2 A.M.EDWARDS,A.SAVCHENKO REVDAT 2 01-AUG-12 3TYP 1 AUTHOR KEYWDS REMARK REVDAT 1 09-MAY-12 3TYP 0 JRNL AUTH D.DELVAUX,M.R.V.S.MURTY,V.GABELICA,B.LAKAYE,V.V.LUNIN, JRNL AUTH 2 T.SKARINA,O.ONOPRIYENKO,G.KOHN,P.WINS,E.DE PAUW, JRNL AUTH 3 L.BETTENDORFF JRNL TITL A SPECIFIC INORGANIC TRIPHOSPHATASE FROM NITROSOMONAS JRNL TITL 2 EUROPAEA: STRUCTURE AND CATALYTIC MECHANISM. JRNL REF J.BIOL.CHEM. V. 286 34023 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21840996 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 31141 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1669 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2223 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.46 REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE SET COUNT : 135 REMARK 3 BIN FREE R VALUE : 0.3580 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2365 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 324 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.89000 REMARK 3 B22 (A**2) : 0.89000 REMARK 3 B33 (A**2) : -1.34000 REMARK 3 B12 (A**2) : 0.45000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.153 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.156 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.107 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.629 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2498 ; 0.024 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3393 ; 2.072 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 308 ; 6.391 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 123 ;35.711 ;24.065 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 422 ;15.143 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;14.026 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 369 ; 0.160 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1930 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1510 ; 1.460 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2446 ; 2.493 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 988 ; 3.359 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 942 ; 5.215 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3TYP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-OCT-11. REMARK 100 THE RCSB ID CODE IS RCSB068086. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97959 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32884 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 42.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.56000 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NA FORMATE 3.5M, 0.1M BIS-TRIS, PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 168.32267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 84.16133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 84.16133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 168.32267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MOLECULES A, B FORM A DIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -72.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 THR A 3 REMARK 465 GLY A 55 REMARK 465 GLY A 56 REMARK 465 LEU A 57 REMARK 465 SER A 58 REMARK 465 GLY B 55 REMARK 465 GLY B 56 REMARK 465 LEU B 57 REMARK 465 SER B 58 REMARK 465 ARG B 59 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 5 CG1 CG2 CD1 REMARK 470 GLU A 54 CG CD OE1 OE2 REMARK 470 ARG A 59 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 124 CG CD OE1 NE2 REMARK 470 GLU A 134 CG CD OE1 OE2 REMARK 470 GLU B 4 CG CD OE1 OE2 REMARK 470 GLN B 124 CG CD OE1 NE2 REMARK 470 LYS B 140 CG CD CE NZ REMARK 470 LYS B 143 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 262 O HOH B 348 2.08 REMARK 500 O HOH A 177 O HOH A 283 2.10 REMARK 500 OE2 GLU A 99 O HOH A 278 2.13 REMARK 500 O HOH A 252 O HOH B 165 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ALA B 148 CA ALA B 148 CB 0.132 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 235 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH A 327 DISTANCE = 5.27 ANGSTROMS REMARK 525 HOH A 340 DISTANCE = 5.65 ANGSTROMS REMARK 525 HOH A 360 DISTANCE = 5.36 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 157 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 354 O REMARK 620 2 ASP A 94 O 83.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 157 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 331 O REMARK 620 2 ASP B 94 O 78.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 154 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 290 O REMARK 620 2 PHE B 132 O 106.7 REMARK 620 3 HOH B 176 O 73.7 91.1 REMARK 620 4 HOH B 174 O 171.8 81.4 107.8 REMARK 620 5 HOH B 242 O 88.3 164.9 94.6 83.5 REMARK 620 6 PRO B 130 O 87.8 85.0 159.2 91.8 94.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 154 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 186 O REMARK 620 2 PHE A 132 O 106.6 REMARK 620 3 HOH A 240 O 79.9 172.7 REMARK 620 4 HOH A 246 O 73.4 92.6 92.4 REMARK 620 5 HOH A 173 O 166.0 81.1 93.2 94.9 REMARK 620 6 PRO A 130 O 99.9 85.6 90.2 172.3 92.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 155 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 148 O REMARK 620 2 SER B 150 O 99.7 REMARK 620 3 HOH B 163 O 81.5 89.1 REMARK 620 4 HOH B 167 O 119.3 139.4 86.1 REMARK 620 5 GLY B 80 O 84.1 110.9 157.0 85.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 155 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 148 O REMARK 620 2 SER A 150 O 98.6 REMARK 620 3 HOH A 177 O 113.0 143.7 REMARK 620 4 HOH A 182 O 73.8 88.3 84.2 REMARK 620 5 GLY A 80 O 84.3 115.0 86.4 150.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 156 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 108 O REMARK 620 2 HIS B 106 O 91.2 REMARK 620 3 HOH B 196 O 93.7 172.5 REMARK 620 4 HOH B 259 O 79.7 103.7 82.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 156 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 108 O REMARK 620 2 HOH A 265 O 87.9 REMARK 620 3 HIS A 106 O 90.9 111.7 REMARK 620 4 HOH A 193 O 85.1 86.3 161.5 REMARK 620 5 HOH A 261 O 170.1 88.7 81.7 104.0 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 154 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 155 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 156 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 157 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 158 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 154 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 155 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 156 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 157 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 158 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 159 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FBL RELATED DB: PDB REMARK 900 2FBL HAS SEQUENCE ERRORS DBREF 3TYP A 3 152 UNP Q82UI9 Q82UI9_NITEU 2 151 DBREF 3TYP B 3 152 UNP Q82UI9 Q82UI9_NITEU 2 151 SEQADV 3TYP GLY A -1 UNP Q82UI9 EXPRESSION TAG SEQADV 3TYP HIS A 0 UNP Q82UI9 EXPRESSION TAG SEQADV 3TYP MET A 1 UNP Q82UI9 CLONING ARTIFACT SEQADV 3TYP VAL A 2 UNP Q82UI9 CLONING ARTIFACT SEQADV 3TYP GLY A 153 UNP Q82UI9 CLONING ARTIFACT SEQADV 3TYP GLY B -1 UNP Q82UI9 EXPRESSION TAG SEQADV 3TYP HIS B 0 UNP Q82UI9 EXPRESSION TAG SEQADV 3TYP MET B 1 UNP Q82UI9 CLONING ARTIFACT SEQADV 3TYP VAL B 2 UNP Q82UI9 CLONING ARTIFACT SEQADV 3TYP GLY B 153 UNP Q82UI9 CLONING ARTIFACT SEQRES 1 A 155 GLY HIS MET VAL THR GLU ILE GLU ARG LYS PHE LEU VAL SEQRES 2 A 155 ALA THR PHE PRO ASP GLY GLU LEU HIS ALA VAL PRO LEU SEQRES 3 A 155 ARG GLN GLY TYR LEU THR THR PRO THR ASP SER ILE GLU SEQRES 4 A 155 LEU ARG LEU ARG GLN GLN GLY THR GLU TYR PHE MET THR SEQRES 5 A 155 LEU LYS SER GLU GLY GLY LEU SER ARG GLN GLU TYR GLU SEQRES 6 A 155 ILE GLN ILE ASP VAL THR GLN PHE GLU MET LEU TRP PRO SEQRES 7 A 155 ALA THR GLU GLY ARG ARG VAL GLU LYS THR ARG TYR SER SEQRES 8 A 155 GLY LYS LEU PRO ASP GLY GLN LEU PHE GLU LEU ASP VAL SEQRES 9 A 155 PHE ALA GLY HIS LEU SER PRO LEU MET LEU VAL GLU VAL SEQRES 10 A 155 GLU PHE LEU SER GLU ASP ALA ALA GLN ALA PHE ILE PRO SEQRES 11 A 155 PRO PRO TRP PHE GLY GLU GLU VAL THR GLU ASP LYS ARG SEQRES 12 A 155 TYR LYS ASN LYS ALA LEU ALA LEU SER ILE PRO GLY SEQRES 1 B 155 GLY HIS MET VAL THR GLU ILE GLU ARG LYS PHE LEU VAL SEQRES 2 B 155 ALA THR PHE PRO ASP GLY GLU LEU HIS ALA VAL PRO LEU SEQRES 3 B 155 ARG GLN GLY TYR LEU THR THR PRO THR ASP SER ILE GLU SEQRES 4 B 155 LEU ARG LEU ARG GLN GLN GLY THR GLU TYR PHE MET THR SEQRES 5 B 155 LEU LYS SER GLU GLY GLY LEU SER ARG GLN GLU TYR GLU SEQRES 6 B 155 ILE GLN ILE ASP VAL THR GLN PHE GLU MET LEU TRP PRO SEQRES 7 B 155 ALA THR GLU GLY ARG ARG VAL GLU LYS THR ARG TYR SER SEQRES 8 B 155 GLY LYS LEU PRO ASP GLY GLN LEU PHE GLU LEU ASP VAL SEQRES 9 B 155 PHE ALA GLY HIS LEU SER PRO LEU MET LEU VAL GLU VAL SEQRES 10 B 155 GLU PHE LEU SER GLU ASP ALA ALA GLN ALA PHE ILE PRO SEQRES 11 B 155 PRO PRO TRP PHE GLY GLU GLU VAL THR GLU ASP LYS ARG SEQRES 12 B 155 TYR LYS ASN LYS ALA LEU ALA LEU SER ILE PRO GLY HET NA A 154 1 HET NA A 155 1 HET NA A 156 1 HET NA A 157 1 HET EDO A 158 4 HET NA B 154 1 HET NA B 155 1 HET NA B 156 1 HET NA B 157 1 HET EDO B 158 4 HET EDO B 159 4 HETNAM NA SODIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NA 8(NA 1+) FORMUL 7 EDO 3(C2 H6 O2) FORMUL 14 HOH *324(H2 O) HELIX 1 1 ASP A 67 TRP A 75 1 9 HELIX 2 2 PRO A 76 GLU A 79 5 4 HELIX 3 3 GLY A 105 SER A 108 5 4 HELIX 4 4 SER A 119 PHE A 126 1 8 HELIX 5 5 ASP A 139 TYR A 142 5 4 HELIX 6 6 LYS A 143 SER A 150 1 8 HELIX 7 7 ASP B 67 TRP B 75 1 9 HELIX 8 8 PRO B 76 GLU B 79 5 4 HELIX 9 9 GLY B 105 SER B 108 5 4 HELIX 10 10 ASP B 121 PHE B 126 1 6 HELIX 11 11 ASP B 139 TYR B 142 5 4 HELIX 12 12 LYS B 143 SER B 150 1 8 SHEET 1 A 9 GLN A 60 ILE A 66 0 SHEET 2 A 9 GLU A 46 SER A 53 -1 N LEU A 51 O TYR A 62 SHEET 3 A 9 GLU A 37 GLN A 43 -1 N GLU A 37 O LYS A 52 SHEET 4 A 9 HIS A 20 TYR A 28 -1 N ARG A 25 O GLN A 42 SHEET 5 A 9 ARG A 82 LYS A 91 -1 O ARG A 87 N VAL A 22 SHEET 6 A 9 LEU A 97 PHE A 103 -1 O LEU A 100 N TYR A 88 SHEET 7 A 9 MET A 111 GLU A 116 -1 O GLU A 114 N GLU A 99 SHEET 8 A 9 GLU A 6 VAL A 11 -1 N PHE A 9 O VAL A 113 SHEET 9 A 9 PHE A 132 GLU A 135 -1 O GLY A 133 N LEU A 10 SHEET 1 B 9 GLU B 61 ILE B 66 0 SHEET 2 B 9 GLU B 46 LYS B 52 -1 N LEU B 51 O TYR B 62 SHEET 3 B 9 GLU B 37 GLN B 43 -1 N GLU B 37 O LYS B 52 SHEET 4 B 9 HIS B 20 TYR B 28 -1 N ARG B 25 O GLN B 42 SHEET 5 B 9 ARG B 82 LYS B 91 -1 O LYS B 85 N LEU B 24 SHEET 6 B 9 LEU B 97 PHE B 103 -1 O LEU B 100 N TYR B 88 SHEET 7 B 9 MET B 111 PHE B 117 -1 O GLU B 114 N GLU B 99 SHEET 8 B 9 ILE B 5 VAL B 11 -1 N ILE B 5 O PHE B 117 SHEET 9 B 9 PHE B 132 GLU B 135 -1 O GLY B 133 N LEU B 10 LINK NA NA A 157 O HOH A 354 1555 1555 2.11 LINK NA NA B 157 O HOH B 331 1555 1555 2.15 LINK NA NA B 154 O HOH B 290 1555 1555 2.17 LINK O PHE B 132 NA NA B 154 1555 1555 2.21 LINK NA NA A 154 O HOH A 186 1555 1555 2.22 LINK NA NA B 154 O HOH B 176 1555 1555 2.24 LINK O ALA B 148 NA NA B 155 1555 1555 2.24 LINK NA NA B 154 O HOH B 174 1555 1555 2.28 LINK O PHE A 132 NA NA A 154 1555 1555 2.28 LINK O ALA A 148 NA NA A 155 1555 1555 2.31 LINK O SER A 150 NA NA A 155 1555 1555 2.31 LINK O SER B 108 NA NA B 156 1555 1555 2.33 LINK O SER B 150 NA NA B 155 1555 1555 2.33 LINK NA NA A 154 O HOH A 240 1555 1555 2.34 LINK NA NA A 154 O HOH A 246 1555 1555 2.35 LINK NA NA A 155 O HOH A 177 1555 1555 2.35 LINK O SER A 108 NA NA A 156 1555 1555 2.37 LINK NA NA B 155 O HOH B 163 1555 1555 2.39 LINK NA NA B 154 O HOH B 242 1555 1555 2.42 LINK NA NA A 156 O HOH A 265 1555 1555 2.44 LINK NA NA B 155 O HOH B 167 1555 1555 2.45 LINK O HIS A 106 NA NA A 156 1555 1555 2.45 LINK O HIS B 106 NA NA B 156 1555 1555 2.47 LINK NA NA B 156 O HOH B 196 1555 1555 2.48 LINK NA NA A 155 O HOH A 182 1555 1555 2.49 LINK NA NA B 156 O HOH B 259 1555 1555 2.52 LINK NA NA A 154 O HOH A 173 1555 1555 2.53 LINK O ASP B 94 NA NA B 157 1555 1555 2.53 LINK NA NA A 156 O HOH A 193 1555 1555 2.55 LINK O ASP A 94 NA NA A 157 1555 1555 2.56 LINK NA NA A 156 O HOH A 261 1555 1555 2.56 LINK O PRO A 130 NA NA A 154 1555 1555 2.56 LINK O GLY A 80 NA NA A 155 1555 1555 2.56 LINK O PRO B 130 NA NA B 154 1555 1555 2.60 LINK O GLY B 80 NA NA B 155 1555 1555 2.62 CISPEP 1 SER A 108 PRO A 109 0 10.95 CISPEP 2 SER B 108 PRO B 109 0 9.00 SITE 1 AC1 6 PRO A 130 PHE A 132 HOH A 173 HOH A 186 SITE 2 AC1 6 HOH A 240 HOH A 246 SITE 1 AC2 5 GLY A 80 ALA A 148 SER A 150 HOH A 177 SITE 2 AC2 5 HOH A 182 SITE 1 AC3 5 HIS A 106 SER A 108 HOH A 193 HOH A 261 SITE 2 AC3 5 HOH A 265 SITE 1 AC4 6 PRO A 32 ASP A 34 ASP A 94 HOH A 187 SITE 2 AC4 6 HOH A 254 HOH A 354 SITE 1 AC5 6 ARG A 82 VAL A 83 GLU A 84 ALA A 104 SITE 2 AC5 6 LEU A 107 HOH A 180 SITE 1 AC6 6 PRO B 130 PHE B 132 HOH B 174 HOH B 176 SITE 2 AC6 6 HOH B 242 HOH B 290 SITE 1 AC7 5 GLY B 80 ALA B 148 SER B 150 HOH B 163 SITE 2 AC7 5 HOH B 167 SITE 1 AC8 5 HIS B 106 SER B 108 HOH B 196 HOH B 259 SITE 2 AC8 5 HOH B 343 SITE 1 AC9 5 PRO B 32 ASP B 34 ASP B 94 HOH B 184 SITE 2 AC9 5 HOH B 331 SITE 1 BC1 6 ARG B 82 VAL B 83 GLU B 84 ALA B 104 SITE 2 BC1 6 LEU B 107 HOH B 173 SITE 1 BC2 3 MET A 73 GLN B 65 HOH B 341 CRYST1 52.282 52.282 252.484 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019127 0.011043 0.000000 0.00000 SCALE2 0.000000 0.022086 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003961 0.00000 MASTER 454 0 11 12 18 0 21 6 0 0 0 24 END