HEADER PROTEIN BINDING 09-SEP-11 3TQM TITLE STRUCTURE OF AN RIBOSOMAL SUBUNIT INTERFACE PROTEIN FROM COXIELLA TITLE 2 BURNETII COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOME-ASSOCIATED FACTOR Y; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COXIELLA BURNETII; SOURCE 3 ORGANISM_TAXID: 777; SOURCE 4 GENE: CBU_0745; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS PROTEIN SYNTHESIS, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.RUDOLPH,J.CHEUNG,M.C.FRANKLIN,M.CASSIDY,E.GARY,F.BURSHTEYN,J.LOVE REVDAT 4 08-NOV-17 3TQM 1 REMARK REVDAT 3 27-JAN-16 3TQM 1 JRNL REMARK REVDAT 2 24-JUN-15 3TQM 1 JRNL REVDAT 1 28-SEP-11 3TQM 0 JRNL AUTH M.C.FRANKLIN,J.CHEUNG,M.J.RUDOLPH,F.BURSHTEYN,M.CASSIDY, JRNL AUTH 2 E.GARY,B.HILLERICH,Z.K.YAO,P.R.CARLIER,M.TOTROV,J.D.LOVE JRNL TITL STRUCTURAL GENOMICS FOR DRUG DESIGN AGAINST THE PATHOGEN JRNL TITL 2 COXIELLA BURNETII. JRNL REF PROTEINS V. 83 2124 2015 JRNL REFN ISSN 0887-3585 JRNL PMID 26033498 JRNL DOI 10.1002/PROT.24841 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 15883 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 796 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.6086 - 4.4374 0.98 2553 140 0.1987 0.2041 REMARK 3 2 4.4374 - 3.5288 0.97 2552 148 0.1862 0.2342 REMARK 3 3 3.5288 - 3.0847 0.97 2542 135 0.2264 0.2448 REMARK 3 4 3.0847 - 2.8035 0.94 2483 121 0.3002 0.3771 REMARK 3 5 2.8035 - 2.6031 0.95 2526 122 0.3260 0.3673 REMARK 3 6 2.6031 - 2.4500 0.93 2431 130 0.3437 0.3875 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.72 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 25.05 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.54890 REMARK 3 B22 (A**2) : 4.56710 REMARK 3 B33 (A**2) : -0.01820 REMARK 3 B12 (A**2) : 0.45030 REMARK 3 B13 (A**2) : 3.40300 REMARK 3 B23 (A**2) : -0.61920 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3051 REMARK 3 ANGLE : 0.604 4099 REMARK 3 CHIRALITY : 0.042 471 REMARK 3 PLANARITY : 0.003 513 REMARK 3 DIHEDRAL : 14.474 1197 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:12) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0105 5.6943 7.4498 REMARK 3 T TENSOR REMARK 3 T11: 0.1616 T22: 0.1181 REMARK 3 T33: 0.1447 T12: -0.0553 REMARK 3 T13: -0.0275 T23: -0.0229 REMARK 3 L TENSOR REMARK 3 L11: 2.3462 L22: 1.3158 REMARK 3 L33: 1.5667 L12: 0.4905 REMARK 3 L13: 1.4269 L23: -0.4632 REMARK 3 S TENSOR REMARK 3 S11: 0.0622 S12: -0.6300 S13: -0.1962 REMARK 3 S21: -0.2620 S22: 0.1275 S23: 0.1877 REMARK 3 S31: 0.2408 S32: 0.0006 S33: -0.0649 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 13:31) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2938 13.0875 -1.4470 REMARK 3 T TENSOR REMARK 3 T11: 0.1932 T22: 0.2159 REMARK 3 T33: 0.1217 T12: 0.0085 REMARK 3 T13: -0.0670 T23: -0.0458 REMARK 3 L TENSOR REMARK 3 L11: 3.2795 L22: 1.6335 REMARK 3 L33: 1.3680 L12: 0.4481 REMARK 3 L13: 1.7320 L23: 0.8781 REMARK 3 S TENSOR REMARK 3 S11: -0.3832 S12: 1.2646 S13: -0.0136 REMARK 3 S21: -0.1820 S22: 0.4105 S23: 0.1745 REMARK 3 S31: 0.0985 S32: 0.0605 S33: 0.1029 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 32:42) REMARK 3 ORIGIN FOR THE GROUP (A): 29.4485 10.3971 6.8183 REMARK 3 T TENSOR REMARK 3 T11: 0.2158 T22: 0.2957 REMARK 3 T33: 0.1884 T12: -0.0229 REMARK 3 T13: 0.0261 T23: 0.0487 REMARK 3 L TENSOR REMARK 3 L11: 1.5157 L22: 0.3159 REMARK 3 L33: 0.5419 L12: -0.0960 REMARK 3 L13: -0.9041 L23: 0.0696 REMARK 3 S TENSOR REMARK 3 S11: 0.1365 S12: 0.2511 S13: 0.1763 REMARK 3 S21: -0.0711 S22: 0.1084 S23: 0.0224 REMARK 3 S31: -0.0896 S32: -0.1711 S33: -0.1440 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 43:74) REMARK 3 ORIGIN FOR THE GROUP (A): 23.8001 15.8597 11.3386 REMARK 3 T TENSOR REMARK 3 T11: 0.1307 T22: 0.1252 REMARK 3 T33: 0.1081 T12: 0.0273 REMARK 3 T13: -0.0058 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.3396 L22: 0.6681 REMARK 3 L33: 0.4746 L12: -0.2861 REMARK 3 L13: 0.2321 L23: 0.0633 REMARK 3 S TENSOR REMARK 3 S11: 0.2114 S12: -0.1143 S13: -0.1914 REMARK 3 S21: -0.1263 S22: -0.1246 S23: 0.1395 REMARK 3 S31: -0.0529 S32: -0.0316 S33: 0.0085 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 75:91) REMARK 3 ORIGIN FOR THE GROUP (A): 32.3036 22.4429 4.3545 REMARK 3 T TENSOR REMARK 3 T11: 0.1753 T22: 0.0590 REMARK 3 T33: 0.1505 T12: -0.0029 REMARK 3 T13: -0.0185 T23: -0.0212 REMARK 3 L TENSOR REMARK 3 L11: 2.1422 L22: 0.3586 REMARK 3 L33: 0.2684 L12: -0.5750 REMARK 3 L13: -0.5464 L23: -0.0387 REMARK 3 S TENSOR REMARK 3 S11: 0.3023 S12: 0.1854 S13: 0.4438 REMARK 3 S21: -0.1858 S22: -0.0820 S23: -0.0080 REMARK 3 S31: -0.1548 S32: -0.1219 S33: -0.2435 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 1:12) REMARK 3 ORIGIN FOR THE GROUP (A): 21.5231 2.4648 -8.0996 REMARK 3 T TENSOR REMARK 3 T11: 0.2911 T22: 0.1228 REMARK 3 T33: 0.3181 T12: 0.0561 REMARK 3 T13: 0.0653 T23: 0.0772 REMARK 3 L TENSOR REMARK 3 L11: 0.1764 L22: 1.6903 REMARK 3 L33: 0.9455 L12: -0.3006 REMARK 3 L13: 0.4712 L23: -1.1668 REMARK 3 S TENSOR REMARK 3 S11: 0.2459 S12: -0.1205 S13: 0.3555 REMARK 3 S21: 0.3712 S22: 0.0000 S23: 0.1048 REMARK 3 S31: -0.6687 S32: 0.1073 S33: -0.1543 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 13:31) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2602 5.4290 -19.2584 REMARK 3 T TENSOR REMARK 3 T11: 0.1925 T22: 0.1832 REMARK 3 T33: 0.1858 T12: -0.0031 REMARK 3 T13: 0.0026 T23: 0.0854 REMARK 3 L TENSOR REMARK 3 L11: 4.4925 L22: 0.9367 REMARK 3 L33: 0.6699 L12: 0.1262 REMARK 3 L13: 1.1049 L23: -0.0893 REMARK 3 S TENSOR REMARK 3 S11: -0.0040 S12: 0.7029 S13: 0.8793 REMARK 3 S21: 0.1830 S22: -0.0223 S23: -0.0132 REMARK 3 S31: -0.0397 S32: 0.3717 S33: 0.1092 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 32:51) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3971 -4.4349 -11.5518 REMARK 3 T TENSOR REMARK 3 T11: 0.1852 T22: 0.2122 REMARK 3 T33: 0.2388 T12: 0.0262 REMARK 3 T13: -0.0463 T23: 0.0281 REMARK 3 L TENSOR REMARK 3 L11: 0.8985 L22: 0.2160 REMARK 3 L33: 0.8358 L12: -0.5128 REMARK 3 L13: -0.6033 L23: 0.5605 REMARK 3 S TENSOR REMARK 3 S11: 0.0222 S12: 0.1628 S13: -0.3480 REMARK 3 S21: 0.0232 S22: -0.1270 S23: 0.2234 REMARK 3 S31: -0.0460 S32: 0.0161 S33: 0.0088 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 52:77) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7392 -5.0751 -16.4046 REMARK 3 T TENSOR REMARK 3 T11: 0.1784 T22: 0.1651 REMARK 3 T33: 0.1384 T12: 0.0126 REMARK 3 T13: 0.0454 T23: 0.0364 REMARK 3 L TENSOR REMARK 3 L11: 1.0176 L22: 0.5412 REMARK 3 L33: 1.2060 L12: 0.3307 REMARK 3 L13: 0.2741 L23: 0.2684 REMARK 3 S TENSOR REMARK 3 S11: -0.3909 S12: 0.4684 S13: -0.1367 REMARK 3 S21: 0.0329 S22: 0.3519 S23: 0.0951 REMARK 3 S31: 0.1818 S32: 0.1384 S33: 0.0203 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 78:92) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8099 -4.9290 -24.2020 REMARK 3 T TENSOR REMARK 3 T11: 0.2935 T22: 0.2866 REMARK 3 T33: 0.0929 T12: 0.0622 REMARK 3 T13: 0.0003 T23: -0.0675 REMARK 3 L TENSOR REMARK 3 L11: 2.1195 L22: 0.6658 REMARK 3 L33: 0.2262 L12: -0.5631 REMARK 3 L13: 0.6004 L23: -0.2865 REMARK 3 S TENSOR REMARK 3 S11: 0.6366 S12: 0.6475 S13: 0.1642 REMARK 3 S21: -0.1933 S22: -0.4585 S23: -0.0862 REMARK 3 S31: 0.1424 S32: -0.2083 S33: -0.1187 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN C AND RESID 1:14) REMARK 3 ORIGIN FOR THE GROUP (A): 29.2103 -0.7168 19.3565 REMARK 3 T TENSOR REMARK 3 T11: 0.0988 T22: 0.2735 REMARK 3 T33: 0.0667 T12: 0.0162 REMARK 3 T13: 0.0684 T23: 0.2140 REMARK 3 L TENSOR REMARK 3 L11: 0.9422 L22: 1.4084 REMARK 3 L33: 0.9398 L12: -1.1241 REMARK 3 L13: -0.7230 L23: 1.1660 REMARK 3 S TENSOR REMARK 3 S11: 0.3019 S12: 0.2525 S13: 0.8027 REMARK 3 S21: -0.1253 S22: -0.1033 S23: -0.7876 REMARK 3 S31: 0.4146 S32: 0.0187 S33: -0.0870 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN C AND RESID 15:28) REMARK 3 ORIGIN FOR THE GROUP (A): 29.0132 -3.4405 30.0642 REMARK 3 T TENSOR REMARK 3 T11: 0.3251 T22: 0.1613 REMARK 3 T33: 0.2412 T12: 0.0639 REMARK 3 T13: -0.0220 T23: 0.0998 REMARK 3 L TENSOR REMARK 3 L11: 2.7449 L22: 2.8726 REMARK 3 L33: 2.5251 L12: 1.0125 REMARK 3 L13: 0.6731 L23: -2.1196 REMARK 3 S TENSOR REMARK 3 S11: 0.1990 S12: -0.7468 S13: -0.9628 REMARK 3 S21: 0.0942 S22: 0.0574 S23: -0.2916 REMARK 3 S31: 0.1917 S32: 0.2066 S33: -0.3025 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN C AND RESID 29:51) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5346 5.6023 24.1033 REMARK 3 T TENSOR REMARK 3 T11: -0.3111 T22: 0.2799 REMARK 3 T33: -0.0730 T12: 0.0020 REMARK 3 T13: 0.3094 T23: 0.0610 REMARK 3 L TENSOR REMARK 3 L11: 0.8487 L22: 0.7510 REMARK 3 L33: 0.7565 L12: 0.6618 REMARK 3 L13: -0.6615 L23: -0.0329 REMARK 3 S TENSOR REMARK 3 S11: 0.2008 S12: -0.5079 S13: -0.0194 REMARK 3 S21: 0.3676 S22: -0.3516 S23: -0.5287 REMARK 3 S31: -0.3077 S32: 0.2718 S33: 0.1067 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN C AND RESID 52:77) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2414 7.2951 27.2324 REMARK 3 T TENSOR REMARK 3 T11: 0.1821 T22: 0.2780 REMARK 3 T33: -0.0319 T12: 0.0451 REMARK 3 T13: -0.0237 T23: -0.0454 REMARK 3 L TENSOR REMARK 3 L11: 0.5505 L22: 0.7343 REMARK 3 L33: 0.3963 L12: -0.1658 REMARK 3 L13: 0.2048 L23: -0.4822 REMARK 3 S TENSOR REMARK 3 S11: -0.2639 S12: -0.1998 S13: 0.4226 REMARK 3 S21: 0.3549 S22: 0.2313 S23: 0.1583 REMARK 3 S31: -0.2640 S32: -0.2218 S33: 0.1146 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN C AND RESID 78:93) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9350 7.0461 35.1003 REMARK 3 T TENSOR REMARK 3 T11: 0.2319 T22: 0.2328 REMARK 3 T33: 0.1134 T12: 0.0023 REMARK 3 T13: 0.0474 T23: -0.0767 REMARK 3 L TENSOR REMARK 3 L11: 3.4178 L22: 0.7573 REMARK 3 L33: 0.4116 L12: 0.4929 REMARK 3 L13: -0.3135 L23: -0.2683 REMARK 3 S TENSOR REMARK 3 S11: 0.5347 S12: -0.5835 S13: 0.3452 REMARK 3 S21: -0.0446 S22: -0.5252 S23: 0.0092 REMARK 3 S31: 0.0388 S32: -0.0465 S33: -0.1469 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN D AND RESID 1:15) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1197 -3.5809 4.1147 REMARK 3 T TENSOR REMARK 3 T11: 0.1369 T22: 0.1955 REMARK 3 T33: 0.1738 T12: 0.0034 REMARK 3 T13: -0.0075 T23: -0.0886 REMARK 3 L TENSOR REMARK 3 L11: 0.7754 L22: 0.4032 REMARK 3 L33: 5.0501 L12: -0.0241 REMARK 3 L13: -0.0591 L23: -0.6609 REMARK 3 S TENSOR REMARK 3 S11: -0.1047 S12: 0.0292 S13: 0.0683 REMARK 3 S21: -0.0575 S22: 0.2372 S23: -0.0027 REMARK 3 S31: -0.6908 S32: -0.6696 S33: 0.1271 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN D AND RESID 16:33) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7565 -11.5841 12.9833 REMARK 3 T TENSOR REMARK 3 T11: 0.2310 T22: 0.3417 REMARK 3 T33: 0.2109 T12: 0.0544 REMARK 3 T13: 0.0598 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 5.0076 L22: 1.4656 REMARK 3 L33: 1.7783 L12: -1.8679 REMARK 3 L13: 2.4403 L23: -1.0374 REMARK 3 S TENSOR REMARK 3 S11: -0.5478 S12: -1.2943 S13: -0.1929 REMARK 3 S21: 0.4992 S22: 0.5072 S23: 0.0046 REMARK 3 S31: 0.0885 S32: -0.4532 S33: 0.1079 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: (CHAIN D AND RESID 34:51) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1209 -9.9812 -1.8072 REMARK 3 T TENSOR REMARK 3 T11: 0.0431 T22: 0.0807 REMARK 3 T33: 0.2047 T12: 0.0131 REMARK 3 T13: -0.0410 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 2.2037 L22: 1.5242 REMARK 3 L33: 4.8316 L12: 0.5331 REMARK 3 L13: 2.6155 L23: 0.4509 REMARK 3 S TENSOR REMARK 3 S11: 0.3153 S12: -0.5716 S13: -0.8509 REMARK 3 S21: 0.0824 S22: 0.1107 S23: -0.0774 REMARK 3 S31: 0.0746 S32: -0.7030 S33: -0.3754 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: (CHAIN D AND RESID 52:77) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5090 -14.5142 2.1106 REMARK 3 T TENSOR REMARK 3 T11: 0.1337 T22: 0.0771 REMARK 3 T33: 0.1226 T12: -0.0150 REMARK 3 T13: 0.0293 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 4.3640 L22: 1.2575 REMARK 3 L33: 0.4401 L12: 0.3005 REMARK 3 L13: 0.4930 L23: -0.3459 REMARK 3 S TENSOR REMARK 3 S11: -0.0144 S12: -0.4284 S13: -0.4276 REMARK 3 S21: -0.2145 S22: 0.0090 S23: 0.1326 REMARK 3 S31: 0.2246 S32: -0.0014 S33: 0.0567 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: (CHAIN D AND RESID 78:93) REMARK 3 ORIGIN FOR THE GROUP (A): 28.9338 -20.6648 7.1179 REMARK 3 T TENSOR REMARK 3 T11: 0.1813 T22: -0.0553 REMARK 3 T33: 0.1438 T12: 0.0739 REMARK 3 T13: 0.0396 T23: 0.0458 REMARK 3 L TENSOR REMARK 3 L11: 1.5033 L22: 0.3175 REMARK 3 L33: 0.5038 L12: 0.5704 REMARK 3 L13: 0.8498 L23: 0.1573 REMARK 3 S TENSOR REMARK 3 S11: 0.2354 S12: -0.0020 S13: -0.3009 REMARK 3 S21: 0.0903 S22: -0.1883 S23: -0.1006 REMARK 3 S31: 0.5873 S32: -0.2855 S33: -0.1902 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3TQM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1000067800. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16605 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM AMMONIUM SULFATE, 20% PEG 3350, REMARK 280 PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 92 REMARK 465 GLY A 93 REMARK 465 ASP A 94 REMARK 465 HIS A 95 REMARK 465 ARG A 96 REMARK 465 GLY B 93 REMARK 465 ASP B 94 REMARK 465 HIS B 95 REMARK 465 ARG B 96 REMARK 465 ASP C 94 REMARK 465 HIS C 95 REMARK 465 ARG C 96 REMARK 465 ASP D 94 REMARK 465 HIS D 95 REMARK 465 ARG D 96 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 45 -109.65 63.79 REMARK 500 SER A 67 -174.47 -171.82 REMARK 500 LYS B 45 -103.55 55.44 REMARK 500 SER B 67 -177.65 -171.03 REMARK 500 LYS C 45 -118.89 63.40 REMARK 500 SER C 67 -179.79 -178.45 REMARK 500 LYS C 92 101.90 94.30 REMARK 500 LYS D 45 -116.07 62.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 97 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 97 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 97 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 97 DBREF 3TQM A 1 96 UNP Q83DI6 Q83DI6_COXBU 1 96 DBREF 3TQM B 1 96 UNP Q83DI6 Q83DI6_COXBU 1 96 DBREF 3TQM C 1 96 UNP Q83DI6 Q83DI6_COXBU 1 96 DBREF 3TQM D 1 96 UNP Q83DI6 Q83DI6_COXBU 1 96 SEQRES 1 A 96 MSE HIS ILE GLN MSE THR GLY GLN GLY VAL ASP ILE SER SEQRES 2 A 96 PRO ALA LEU ARG GLU LEU THR GLU LYS LYS LEU HIS ARG SEQRES 3 A 96 ILE GLN PRO CYS ARG ASP GLU ILE SER ASN ILE HIS ILE SEQRES 4 A 96 ILE PHE HIS ILE ASN LYS LEU LYS LYS ILE VAL ASP ALA SEQRES 5 A 96 ASN VAL LYS LEU PRO GLY SER THR ILE ASN ALA GLN ALA SEQRES 6 A 96 GLU SER ASP ASP MSE TYR LYS THR VAL ASP LEU LEU MSE SEQRES 7 A 96 HIS LYS LEU GLU THR GLN LEU SER LYS TYR LYS ALA LYS SEQRES 8 A 96 LYS GLY ASP HIS ARG SEQRES 1 B 96 MSE HIS ILE GLN MSE THR GLY GLN GLY VAL ASP ILE SER SEQRES 2 B 96 PRO ALA LEU ARG GLU LEU THR GLU LYS LYS LEU HIS ARG SEQRES 3 B 96 ILE GLN PRO CYS ARG ASP GLU ILE SER ASN ILE HIS ILE SEQRES 4 B 96 ILE PHE HIS ILE ASN LYS LEU LYS LYS ILE VAL ASP ALA SEQRES 5 B 96 ASN VAL LYS LEU PRO GLY SER THR ILE ASN ALA GLN ALA SEQRES 6 B 96 GLU SER ASP ASP MSE TYR LYS THR VAL ASP LEU LEU MSE SEQRES 7 B 96 HIS LYS LEU GLU THR GLN LEU SER LYS TYR LYS ALA LYS SEQRES 8 B 96 LYS GLY ASP HIS ARG SEQRES 1 C 96 MSE HIS ILE GLN MSE THR GLY GLN GLY VAL ASP ILE SER SEQRES 2 C 96 PRO ALA LEU ARG GLU LEU THR GLU LYS LYS LEU HIS ARG SEQRES 3 C 96 ILE GLN PRO CYS ARG ASP GLU ILE SER ASN ILE HIS ILE SEQRES 4 C 96 ILE PHE HIS ILE ASN LYS LEU LYS LYS ILE VAL ASP ALA SEQRES 5 C 96 ASN VAL LYS LEU PRO GLY SER THR ILE ASN ALA GLN ALA SEQRES 6 C 96 GLU SER ASP ASP MSE TYR LYS THR VAL ASP LEU LEU MSE SEQRES 7 C 96 HIS LYS LEU GLU THR GLN LEU SER LYS TYR LYS ALA LYS SEQRES 8 C 96 LYS GLY ASP HIS ARG SEQRES 1 D 96 MSE HIS ILE GLN MSE THR GLY GLN GLY VAL ASP ILE SER SEQRES 2 D 96 PRO ALA LEU ARG GLU LEU THR GLU LYS LYS LEU HIS ARG SEQRES 3 D 96 ILE GLN PRO CYS ARG ASP GLU ILE SER ASN ILE HIS ILE SEQRES 4 D 96 ILE PHE HIS ILE ASN LYS LEU LYS LYS ILE VAL ASP ALA SEQRES 5 D 96 ASN VAL LYS LEU PRO GLY SER THR ILE ASN ALA GLN ALA SEQRES 6 D 96 GLU SER ASP ASP MSE TYR LYS THR VAL ASP LEU LEU MSE SEQRES 7 D 96 HIS LYS LEU GLU THR GLN LEU SER LYS TYR LYS ALA LYS SEQRES 8 D 96 LYS GLY ASP HIS ARG MODRES 3TQM MSE A 1 MET SELENOMETHIONINE MODRES 3TQM MSE A 5 MET SELENOMETHIONINE MODRES 3TQM MSE A 70 MET SELENOMETHIONINE MODRES 3TQM MSE A 78 MET SELENOMETHIONINE MODRES 3TQM MSE B 1 MET SELENOMETHIONINE MODRES 3TQM MSE B 5 MET SELENOMETHIONINE MODRES 3TQM MSE B 70 MET SELENOMETHIONINE MODRES 3TQM MSE B 78 MET SELENOMETHIONINE MODRES 3TQM MSE C 1 MET SELENOMETHIONINE MODRES 3TQM MSE C 5 MET SELENOMETHIONINE MODRES 3TQM MSE C 70 MET SELENOMETHIONINE MODRES 3TQM MSE C 78 MET SELENOMETHIONINE MODRES 3TQM MSE D 1 MET SELENOMETHIONINE MODRES 3TQM MSE D 5 MET SELENOMETHIONINE MODRES 3TQM MSE D 70 MET SELENOMETHIONINE MODRES 3TQM MSE D 78 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 5 8 HET MSE A 70 8 HET MSE A 78 8 HET MSE B 1 8 HET MSE B 5 8 HET MSE B 70 8 HET MSE B 78 8 HET MSE C 1 8 HET MSE C 5 8 HET MSE C 70 8 HET MSE C 78 8 HET MSE D 1 8 HET MSE D 5 8 HET MSE D 70 8 HET MSE D 78 8 HET SO4 A 97 5 HET SO4 B 97 5 HET SO4 C 97 5 HET SO4 D 97 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 5 SO4 4(O4 S 2-) FORMUL 9 HOH *164(H2 O) HELIX 1 1 SER A 13 HIS A 25 1 13 HELIX 2 2 CYS A 30 ILE A 34 5 5 HELIX 3 3 ASP A 69 ALA A 90 1 22 HELIX 4 4 SER B 13 HIS B 25 1 13 HELIX 5 5 CYS B 30 ILE B 34 5 5 HELIX 6 6 ASP B 69 LYS B 91 1 23 HELIX 7 7 SER C 13 HIS C 25 1 13 HELIX 8 8 CYS C 30 ILE C 34 5 5 HELIX 9 9 ASP C 69 LYS C 91 1 23 HELIX 10 10 SER D 13 HIS D 25 1 13 HELIX 11 11 CYS D 30 ILE D 34 5 5 HELIX 12 12 ASP D 69 LYS D 92 1 24 SHEET 1 A 4 HIS A 2 GLN A 8 0 SHEET 2 A 4 ASN A 36 ASN A 44 1 O ILE A 39 N GLN A 4 SHEET 3 A 4 LYS A 47 LEU A 56 -1 O ASP A 51 N ILE A 40 SHEET 4 A 4 SER A 59 ALA A 65 -1 O ILE A 61 N VAL A 54 SHEET 1 B 4 HIS B 2 GLY B 7 0 SHEET 2 B 4 ASN B 36 ASN B 44 1 O ILE B 37 N GLN B 4 SHEET 3 B 4 LYS B 47 LYS B 55 -1 O ASP B 51 N ILE B 40 SHEET 4 B 4 THR B 60 SER B 67 -1 O ILE B 61 N VAL B 54 SHEET 1 C 4 HIS C 2 GLY C 7 0 SHEET 2 C 4 ASN C 36 ASN C 44 1 O ILE C 39 N GLN C 4 SHEET 3 C 4 LYS C 47 LEU C 56 -1 O LYS C 55 N ASN C 36 SHEET 4 C 4 SER C 59 SER C 67 -1 O ILE C 61 N VAL C 54 SHEET 1 D 4 HIS D 2 GLN D 8 0 SHEET 2 D 4 ASN D 36 ASN D 44 1 O ILE D 39 N GLN D 4 SHEET 3 D 4 LYS D 47 LYS D 55 -1 O ASP D 51 N ILE D 40 SHEET 4 D 4 THR D 60 SER D 67 -1 O SER D 67 N LYS D 48 LINK C MSE A 1 N HIS A 2 1555 1555 1.33 LINK C GLN A 4 N MSE A 5 1555 1555 1.33 LINK C MSE A 5 N THR A 6 1555 1555 1.33 LINK C ASP A 69 N MSE A 70 1555 1555 1.33 LINK C MSE A 70 N TYR A 71 1555 1555 1.33 LINK C LEU A 77 N MSE A 78 1555 1555 1.33 LINK C MSE A 78 N HIS A 79 1555 1555 1.33 LINK C MSE B 1 N HIS B 2 1555 1555 1.33 LINK C GLN B 4 N MSE B 5 1555 1555 1.33 LINK C MSE B 5 N THR B 6 1555 1555 1.33 LINK C ASP B 69 N MSE B 70 1555 1555 1.33 LINK C MSE B 70 N TYR B 71 1555 1555 1.33 LINK C LEU B 77 N MSE B 78 1555 1555 1.33 LINK C MSE B 78 N HIS B 79 1555 1555 1.33 LINK C MSE C 1 N HIS C 2 1555 1555 1.33 LINK C GLN C 4 N MSE C 5 1555 1555 1.33 LINK C MSE C 5 N THR C 6 1555 1555 1.33 LINK C ASP C 69 N MSE C 70 1555 1555 1.33 LINK C MSE C 70 N TYR C 71 1555 1555 1.33 LINK C LEU C 77 N MSE C 78 1555 1555 1.33 LINK C MSE C 78 N HIS C 79 1555 1555 1.33 LINK C MSE D 1 N HIS D 2 1555 1555 1.33 LINK C GLN D 4 N MSE D 5 1555 1555 1.33 LINK C MSE D 5 N THR D 6 1555 1555 1.33 LINK C ASP D 69 N MSE D 70 1555 1555 1.33 LINK C MSE D 70 N TYR D 71 1555 1555 1.33 LINK C LEU D 77 N MSE D 78 1555 1555 1.33 LINK C MSE D 78 N HIS D 79 1555 1555 1.33 CISPEP 1 GLN A 28 PRO A 29 0 3.85 CISPEP 2 GLN B 28 PRO B 29 0 8.23 CISPEP 3 GLN C 28 PRO C 29 0 -0.25 CISPEP 4 GLN D 28 PRO D 29 0 -3.45 SITE 1 AC1 7 SER A 13 LYS A 55 PRO A 57 GLY A 58 SITE 2 AC1 7 TYR A 71 HOH A 119 HOH A 130 SITE 1 AC2 6 SER B 13 LEU B 56 PRO B 57 GLY B 58 SITE 2 AC2 6 TYR B 71 HOH B 109 SITE 1 AC3 6 SER C 13 PRO C 57 GLY C 58 TYR C 71 SITE 2 AC3 6 HOH C 130 HOH C 134 SITE 1 AC4 7 SER D 13 LYS D 55 PRO D 57 GLY D 58 SITE 2 AC4 7 TYR D 71 HOH D 101 HOH D 104 CRYST1 35.558 52.616 71.295 115.95 90.02 102.32 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028123 0.006144 0.003092 0.00000 SCALE2 0.000000 0.019454 0.009747 0.00000 SCALE3 0.000000 0.000000 0.015688 0.00000 MASTER 573 0 20 12 16 0 8 6 0 0 0 32 END