HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 07-SEP-11 3TP4 TITLE CRYSTAL STRUCTURE OF ENGINEERED PROTEIN AT THE RESOLUTION 1.98A, TITLE 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET OR128 COMPND MOL_ID: 1; COMPND 2 MOLECULE: COMPUTATIONAL DESIGN OF ENZYME; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET29B KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, OR128, OSH97, KEYWDS 3 UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.KUZIN,M.SU,J.SEETHARAMAN,S.RAJAGOPALAN,J.K.EVERETT,R.NAIR, AUTHOR 2 T.B.ACTON,B.ROST,D.BAKER,G.T.MONTELIONE,J.F.HUNT,L.TONG,NORTHEAST AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 3 14-MAY-14 3TP4 1 JRNL REVDAT 2 16-APR-14 3TP4 1 JRNL REVDAT 1 05-OCT-11 3TP4 0 JRNL AUTH S.RAJAGOPALAN,C.WANG,K.YU,A.P.KUZIN,F.RICHTER,S.LEW, JRNL AUTH 2 A.E.MIKLOS,M.L.MATTHEWS,J.SEETHARAMAN,M.SU,J.F.HUNT, JRNL AUTH 3 B.F.CRAVATT,D.BAKER JRNL TITL DESIGN OF ACTIVATED SERINE-CONTAINING CATALYTIC TRIADS WITH JRNL TITL 2 ATOMIC-LEVEL ACCURACY. JRNL REF NAT.CHEM.BIOL. V. 10 386 2014 JRNL REFN ISSN 1552-4450 JRNL PMID 24705591 JRNL DOI 10.1038/NCHEMBIO.1498 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 81260 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 4074 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.2592 - 6.0633 0.94 2764 147 0.1834 0.2221 REMARK 3 2 6.0633 - 4.8196 0.97 2704 152 0.1497 0.1864 REMARK 3 3 4.8196 - 4.2124 0.97 2679 163 0.1294 0.1347 REMARK 3 4 4.2124 - 3.8282 0.98 2723 132 0.1438 0.1983 REMARK 3 5 3.8282 - 3.5543 0.99 2701 142 0.1789 0.1885 REMARK 3 6 3.5543 - 3.3450 0.99 2701 136 0.1871 0.1999 REMARK 3 7 3.3450 - 3.1777 0.99 2712 145 0.1947 0.2578 REMARK 3 8 3.1777 - 3.0396 0.99 2730 129 0.1938 0.2830 REMARK 3 9 3.0396 - 2.9227 0.99 2673 147 0.1885 0.2288 REMARK 3 10 2.9227 - 2.8219 0.99 2696 138 0.1863 0.2248 REMARK 3 11 2.8219 - 2.7337 0.99 2695 135 0.1747 0.2154 REMARK 3 12 2.7337 - 2.6556 0.99 2677 153 0.1698 0.2531 REMARK 3 13 2.6556 - 2.5858 0.99 2684 151 0.1823 0.2081 REMARK 3 14 2.5858 - 2.5227 1.00 2717 134 0.1916 0.2254 REMARK 3 15 2.5227 - 2.4654 1.00 2683 150 0.1932 0.2613 REMARK 3 16 2.4654 - 2.4129 1.00 2696 128 0.1883 0.2157 REMARK 3 17 2.4129 - 2.3647 1.00 2684 137 0.1723 0.2251 REMARK 3 18 2.3647 - 2.3201 1.00 2720 140 0.1888 0.2463 REMARK 3 19 2.3201 - 2.2787 1.00 2664 150 0.2018 0.2736 REMARK 3 20 2.2787 - 2.2401 1.00 2683 141 0.2101 0.2555 REMARK 3 21 2.2401 - 2.2039 1.00 2718 118 0.2022 0.2860 REMARK 3 22 2.2039 - 2.1700 1.00 2654 157 0.1936 0.2459 REMARK 3 23 2.1700 - 2.1381 1.00 2718 141 0.1992 0.2455 REMARK 3 24 2.1381 - 2.1080 1.00 2661 142 0.2026 0.2638 REMARK 3 25 2.1080 - 2.0796 1.00 2736 123 0.2112 0.2672 REMARK 3 26 2.0796 - 2.0526 1.00 2654 151 0.2219 0.2563 REMARK 3 27 2.0526 - 2.0269 1.00 2643 164 0.2403 0.2623 REMARK 3 28 2.0269 - 2.0025 0.99 2636 140 0.2572 0.3113 REMARK 3 29 2.0025 - 1.9792 0.66 1780 88 0.3056 0.3410 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 46.93 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.640 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.54160 REMARK 3 B22 (A**2) : -0.20650 REMARK 3 B33 (A**2) : -4.33510 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : -0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6945 REMARK 3 ANGLE : 1.005 9499 REMARK 3 CHIRALITY : 0.069 1068 REMARK 3 PLANARITY : 0.004 1256 REMARK 3 DIHEDRAL : 13.143 2330 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: all REMARK 3 ORIGIN FOR THE GROUP (A): 0.7166 -5.9576 2.5477 REMARK 3 T TENSOR REMARK 3 T11: 0.1567 T22: 0.1430 REMARK 3 T33: 0.1359 T12: -0.0090 REMARK 3 T13: 0.0159 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.2603 L22: 0.4673 REMARK 3 L33: 0.2885 L12: 0.0341 REMARK 3 L13: -0.0594 L23: 0.0877 REMARK 3 S TENSOR REMARK 3 S11: -0.0089 S12: 0.0198 S13: 0.0123 REMARK 3 S21: -0.0073 S22: 0.0049 S23: -0.0575 REMARK 3 S31: 0.0073 S32: 0.0010 S33: 0.0106 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3TP4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-SEP-11. REMARK 100 THE RCSB ID CODE IS RCSB067747. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 154916 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.979 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.53100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: PDB ENTRY 2BVY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 100MM NACL, 5MM DTT, REMARK 280 0.02% NAN3, 10MM TRIS-HCL (PH 7.5) . RESERVOIR SOLUTION: REMARK 280 NAACETATE - 0.2M, NACACODYLATE 0.1M, PEG8K - 30%, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 44.33300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.40750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.97150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.40750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.33300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.97150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 THR A 126 REMARK 465 SER A 127 REMARK 465 GLY A 128 REMARK 465 THR A 436 REMARK 465 SER A 437 REMARK 465 ALA A 438 REMARK 465 GLN A 439 REMARK 465 LEU A 440 REMARK 465 ASP A 441 REMARK 465 ASN A 442 REMARK 465 SER A 443 REMARK 465 LEU A 468 REMARK 465 GLU A 469 REMARK 465 HIS A 470 REMARK 465 HIS A 471 REMARK 465 HIS A 472 REMARK 465 HIS A 473 REMARK 465 HIS A 474 REMARK 465 HIS A 475 REMARK 465 MSE B 1 REMARK 465 ALA B 2 REMARK 465 THR B 119 REMARK 465 GLY B 120 REMARK 465 ASP B 125 REMARK 465 THR B 126 REMARK 465 SER B 127 REMARK 465 ALA B 438 REMARK 465 GLN B 439 REMARK 465 LEU B 440 REMARK 465 ASP B 441 REMARK 465 GLU B 469 REMARK 465 HIS B 470 REMARK 465 HIS B 471 REMARK 465 HIS B 472 REMARK 465 HIS B 473 REMARK 465 HIS B 474 REMARK 465 HIS B 475 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 228 O HOH A 734 2.06 REMARK 500 O THR B 391 O HOH B 833 2.11 REMARK 500 O GLY B 412 N THR B 414 2.17 REMARK 500 O HOH A 650 O HOH A 746 2.18 REMARK 500 O HOH B 501 O HOH B 654 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 612 O HOH B 833 4445 1.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 50 17.64 -144.53 REMARK 500 THR A 119 -74.51 -38.40 REMARK 500 TRP A 173 77.05 72.87 REMARK 500 ALA A 426 -42.52 -137.39 REMARK 500 LEU A 427 -42.87 -155.33 REMARK 500 TYR A 445 -54.92 -155.91 REMARK 500 ASP B 50 15.29 -146.76 REMARK 500 SER B 122 58.70 21.30 REMARK 500 ASP B 129 -127.61 58.79 REMARK 500 TRP B 173 79.08 55.22 REMARK 500 ALA B 426 -35.63 -138.30 REMARK 500 LEU B 427 -49.59 -153.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 681 DISTANCE = 6.74 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 476 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 349 O REMARK 620 2 ALA B 347 O 109.1 REMARK 620 3 THR B 352 O 101.5 147.5 REMARK 620 4 THR B 352 OG1 88.4 90.6 79.4 REMARK 620 5 HOH B 810 O 125.6 83.3 87.8 145.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 476 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 476 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 477 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 478 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2BVY RELATED DB: PDB REMARK 900 97% HOMOLOGY REMARK 900 RELATED ID: OR128 RELATED DB: TARGETDB DBREF 3TP4 A 1 475 PDB 3TP4 3TP4 1 475 DBREF 3TP4 B 1 475 PDB 3TP4 3TP4 1 475 SEQRES 1 A 475 MSE ALA ASP GLU THR ILE ALA ILE VAL ASP ALA ASP ALA SEQRES 2 A 475 THR ALA GLU THR ARG SER LEU LEU SER TYR LEU ASP GLY SEQRES 3 A 475 VAL ARG GLY GLU GLY ILE LEU PHE GLY HIS HIS GLY THR SEQRES 4 A 475 THR SER SER GLY LEU THR THR GLY PRO THR ASP GLY THR SEQRES 5 A 475 THR SER ASP VAL LYS ASN VAL THR GLY ASP PHE PRO ALA SEQRES 6 A 475 VAL PHE GLY TRP SER THR SER ILE ILE GLU GLY ASN GLN SEQRES 7 A 475 ARG PRO GLY LEU ALA GLU ASN THR ARG ASP GLU ASN ILE SEQRES 8 A 475 ALA LEU PHE ALA ASP TYR ILE ARG LYS ALA ASP ALA ILE SEQRES 9 A 475 GLY GLY VAL ASN THR VAL GLY ALA GLY VAL GLU ASN PHE SEQRES 10 A 475 VAL THR GLY GLY SER PHE TYR ASP THR SER GLY ASP THR SEQRES 11 A 475 LEU ARG ALA VAL LEU PRO GLY GLY SER HIS HIS ALA GLU SEQRES 12 A 475 LEU VAL ALA TYR LEU ASP ASP ILE ALA GLU LEU ALA ASP SEQRES 13 A 475 ALA SER ARG ARG ASP ASP GLY THR LEU ILE PRO ILE VAL SEQRES 14 A 475 PHE ARG PRO TRP HIS GLU ASN ALA GLY SER TRP PHE TRP SEQRES 15 A 475 TRP GLY ALA ALA TYR GLY SER PRO GLY GLU TYR GLN GLU SEQRES 16 A 475 LEU TYR ARG PHE THR VAL GLU TYR LEU ARG ASP VAL LYS SEQRES 17 A 475 GLY VAL SER ASN PHE LEU TYR ALA TRP GLY PRO GLY GLY SEQRES 18 A 475 GLY PHE GLY GLY ASN ARG ASP VAL TYR LEU ARG THR TYR SEQRES 19 A 475 PRO GLY ASP ALA PHE VAL ASP VAL LEU GLY LEU ASP THR SEQRES 20 A 475 TYR ASP SER THR GLY SER ASP ALA PHE LEU ALA GLY LEU SEQRES 21 A 475 VAL ALA ASP LEU ARG MSE ILE ALA GLU ILE ALA ASP GLU SEQRES 22 A 475 LYS GLY LYS VAL SER ALA PHE THR ARG PHE GLY VAL SER SEQRES 23 A 475 GLY GLY VAL GLY THR ASN GLY SER SER PRO ALA GLN TRP SEQRES 24 A 475 PHE THR LYS VAL LEU ALA ALA ILE LYS ALA ASP PRO VAL SEQRES 25 A 475 ALA SER ARG ASN ALA TYR MSE GLU THR GLY GLU ASN ALA SEQRES 26 A 475 ASP ALA GLY GLN HIS PHE VAL PRO VAL PRO GLY ASP ALA SEQRES 27 A 475 LEU LEU GLU ASP PHE GLN ALA TYR ALA ALA ASP PRO PHE SEQRES 28 A 475 THR LEU PHE ALA SER GLU VAL THR GLY ALA PHE ASP ARG SEQRES 29 A 475 THR VAL ALA ALA ALA PRO ALA GLN PRO VAL VAL HIS ILE SEQRES 30 A 475 ALA SER PRO ALA ASP GLY ALA ARG VAL ALA SER ALA PRO SEQRES 31 A 475 THR THR VAL ARG VAL ARG VAL GLY GLY THR ASP VAL GLN SEQRES 32 A 475 SER VAL THR VAL GLU VAL ALA GLN GLY GLY THR VAL VAL SEQRES 33 A 475 ASP THR LEU ASP LEU ALA TYR ASP GLY ALA LEU TRP TRP SEQRES 34 A 475 THR ALA PRO TRP SER PRO THR SER ALA GLN LEU ASP ASN SEQRES 35 A 475 SER THR TYR THR VAL THR ALA THR ALA THR THR ALA ALA SEQRES 36 A 475 GLY THR LEU ASP VAL THR ASN GLU VAL ALA ALA ALA LEU SEQRES 37 A 475 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 475 MSE ALA ASP GLU THR ILE ALA ILE VAL ASP ALA ASP ALA SEQRES 2 B 475 THR ALA GLU THR ARG SER LEU LEU SER TYR LEU ASP GLY SEQRES 3 B 475 VAL ARG GLY GLU GLY ILE LEU PHE GLY HIS HIS GLY THR SEQRES 4 B 475 THR SER SER GLY LEU THR THR GLY PRO THR ASP GLY THR SEQRES 5 B 475 THR SER ASP VAL LYS ASN VAL THR GLY ASP PHE PRO ALA SEQRES 6 B 475 VAL PHE GLY TRP SER THR SER ILE ILE GLU GLY ASN GLN SEQRES 7 B 475 ARG PRO GLY LEU ALA GLU ASN THR ARG ASP GLU ASN ILE SEQRES 8 B 475 ALA LEU PHE ALA ASP TYR ILE ARG LYS ALA ASP ALA ILE SEQRES 9 B 475 GLY GLY VAL ASN THR VAL GLY ALA GLY VAL GLU ASN PHE SEQRES 10 B 475 VAL THR GLY GLY SER PHE TYR ASP THR SER GLY ASP THR SEQRES 11 B 475 LEU ARG ALA VAL LEU PRO GLY GLY SER HIS HIS ALA GLU SEQRES 12 B 475 LEU VAL ALA TYR LEU ASP ASP ILE ALA GLU LEU ALA ASP SEQRES 13 B 475 ALA SER ARG ARG ASP ASP GLY THR LEU ILE PRO ILE VAL SEQRES 14 B 475 PHE ARG PRO TRP HIS GLU ASN ALA GLY SER TRP PHE TRP SEQRES 15 B 475 TRP GLY ALA ALA TYR GLY SER PRO GLY GLU TYR GLN GLU SEQRES 16 B 475 LEU TYR ARG PHE THR VAL GLU TYR LEU ARG ASP VAL LYS SEQRES 17 B 475 GLY VAL SER ASN PHE LEU TYR ALA TRP GLY PRO GLY GLY SEQRES 18 B 475 GLY PHE GLY GLY ASN ARG ASP VAL TYR LEU ARG THR TYR SEQRES 19 B 475 PRO GLY ASP ALA PHE VAL ASP VAL LEU GLY LEU ASP THR SEQRES 20 B 475 TYR ASP SER THR GLY SER ASP ALA PHE LEU ALA GLY LEU SEQRES 21 B 475 VAL ALA ASP LEU ARG MSE ILE ALA GLU ILE ALA ASP GLU SEQRES 22 B 475 LYS GLY LYS VAL SER ALA PHE THR ARG PHE GLY VAL SER SEQRES 23 B 475 GLY GLY VAL GLY THR ASN GLY SER SER PRO ALA GLN TRP SEQRES 24 B 475 PHE THR LYS VAL LEU ALA ALA ILE LYS ALA ASP PRO VAL SEQRES 25 B 475 ALA SER ARG ASN ALA TYR MSE GLU THR GLY GLU ASN ALA SEQRES 26 B 475 ASP ALA GLY GLN HIS PHE VAL PRO VAL PRO GLY ASP ALA SEQRES 27 B 475 LEU LEU GLU ASP PHE GLN ALA TYR ALA ALA ASP PRO PHE SEQRES 28 B 475 THR LEU PHE ALA SER GLU VAL THR GLY ALA PHE ASP ARG SEQRES 29 B 475 THR VAL ALA ALA ALA PRO ALA GLN PRO VAL VAL HIS ILE SEQRES 30 B 475 ALA SER PRO ALA ASP GLY ALA ARG VAL ALA SER ALA PRO SEQRES 31 B 475 THR THR VAL ARG VAL ARG VAL GLY GLY THR ASP VAL GLN SEQRES 32 B 475 SER VAL THR VAL GLU VAL ALA GLN GLY GLY THR VAL VAL SEQRES 33 B 475 ASP THR LEU ASP LEU ALA TYR ASP GLY ALA LEU TRP TRP SEQRES 34 B 475 THR ALA PRO TRP SER PRO THR SER ALA GLN LEU ASP ASN SEQRES 35 B 475 SER THR TYR THR VAL THR ALA THR ALA THR THR ALA ALA SEQRES 36 B 475 GLY THR LEU ASP VAL THR ASN GLU VAL ALA ALA ALA LEU SEQRES 37 B 475 GLU HIS HIS HIS HIS HIS HIS MODRES 3TP4 MSE A 266 MET SELENOMETHIONINE MODRES 3TP4 MSE A 319 MET SELENOMETHIONINE MODRES 3TP4 MSE B 266 MET SELENOMETHIONINE MODRES 3TP4 MSE B 319 MET SELENOMETHIONINE HET MSE A 266 8 HET MSE A 319 8 HET MSE B 266 8 HET MSE B 319 8 HET ACY A 476 4 HET MG B 476 1 HET ACY B 477 4 HET PEG B 478 7 HETNAM MSE SELENOMETHIONINE HETNAM ACY ACETIC ACID HETNAM MG MAGNESIUM ION HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 ACY 2(C2 H4 O2) FORMUL 4 MG MG 2+ FORMUL 6 PEG C4 H10 O3 FORMUL 7 HOH *735(H2 O) HELIX 1 1 THR A 14 ARG A 28 1 15 HELIX 2 2 SER A 54 GLY A 61 1 8 HELIX 3 3 SER A 72 ILE A 74 5 3 HELIX 4 4 THR A 86 GLY A 105 1 20 HELIX 5 5 GLU A 115 VAL A 118 5 4 HELIX 6 6 THR A 130 LEU A 135 1 6 HELIX 7 7 HIS A 140 SER A 158 1 19 HELIX 8 8 TRP A 183 SER A 189 1 7 HELIX 9 9 SER A 189 VAL A 207 1 19 HELIX 10 10 ASN A 226 LEU A 231 1 6 HELIX 11 11 ARG A 232 TYR A 234 5 3 HELIX 12 12 SER A 253 GLY A 275 1 23 HELIX 13 13 GLN A 298 ALA A 309 1 12 HELIX 14 14 LEU A 339 ASP A 349 1 11 HELIX 15 15 PHE A 354 VAL A 358 5 5 HELIX 16 16 THR B 14 VAL B 27 1 14 HELIX 17 17 SER B 54 GLY B 61 1 8 HELIX 18 18 SER B 72 GLY B 76 5 5 HELIX 19 19 THR B 86 GLY B 105 1 20 HELIX 20 20 GLU B 115 VAL B 118 5 4 HELIX 21 21 ASP B 129 LEU B 135 1 7 HELIX 22 22 HIS B 140 SER B 158 1 19 HELIX 23 23 TRP B 183 SER B 189 1 7 HELIX 24 24 SER B 189 VAL B 207 1 19 HELIX 25 25 ASN B 226 LEU B 231 1 6 HELIX 26 26 ARG B 232 TYR B 234 5 3 HELIX 27 27 SER B 253 GLY B 275 1 23 HELIX 28 28 GLN B 298 ASP B 310 1 13 HELIX 29 29 LEU B 339 ASP B 349 1 11 HELIX 30 30 PHE B 354 VAL B 358 5 5 SHEET 1 A 2 GLU A 4 ILE A 6 0 SHEET 2 A 2 VAL A 366 ALA A 368 1 O ALA A 367 N GLU A 4 SHEET 1 B 8 VAL A 277 SER A 278 0 SHEET 2 B 8 VAL A 242 LEU A 243 1 N LEU A 243 O VAL A 277 SHEET 3 B 8 PHE A 213 TRP A 217 1 N TRP A 217 O VAL A 242 SHEET 4 B 8 ILE A 168 HIS A 174 1 N PHE A 170 O LEU A 214 SHEET 5 B 8 VAL A 107 GLY A 113 1 N VAL A 110 O ARG A 171 SHEET 6 B 8 VAL A 66 SER A 70 1 N PHE A 67 O VAL A 107 SHEET 7 B 8 ILE A 32 HIS A 37 1 N HIS A 36 O GLY A 68 SHEET 8 B 8 TYR A 318 THR A 321 1 O MSE A 319 N GLY A 35 SHEET 1 C 8 VAL A 277 SER A 278 0 SHEET 2 C 8 VAL A 242 LEU A 243 1 N LEU A 243 O VAL A 277 SHEET 3 C 8 PHE A 213 TRP A 217 1 N TRP A 217 O VAL A 242 SHEET 4 C 8 ILE A 168 HIS A 174 1 N PHE A 170 O LEU A 214 SHEET 5 C 8 VAL A 107 GLY A 113 1 N VAL A 110 O ARG A 171 SHEET 6 C 8 VAL A 66 SER A 70 1 N PHE A 67 O VAL A 107 SHEET 7 C 8 ILE A 32 HIS A 37 1 N HIS A 36 O GLY A 68 SHEET 8 C 8 THR A 352 LEU A 353 1 O LEU A 353 N PHE A 34 SHEET 1 D 2 ASP A 246 ASP A 249 0 SHEET 2 D 2 ARG A 282 VAL A 285 1 O ARG A 282 N THR A 247 SHEET 1 E 4 VAL A 374 SER A 379 0 SHEET 2 E 4 THR A 391 GLY A 398 -1 O ARG A 394 N SER A 379 SHEET 3 E 4 TRP A 429 TRP A 433 -1 O ALA A 431 N VAL A 393 SHEET 4 E 4 ALA A 422 TYR A 423 -1 N ALA A 422 O THR A 430 SHEET 1 F 2 ARG A 385 VAL A 386 0 SHEET 2 F 2 ALA A 465 ALA A 466 1 O ALA A 465 N VAL A 386 SHEET 1 G 4 THR A 414 ASP A 420 0 SHEET 2 G 4 VAL A 402 GLN A 411 -1 N VAL A 409 O ASP A 417 SHEET 3 G 4 THR A 446 THR A 453 -1 O THR A 452 N GLN A 403 SHEET 4 G 4 GLY A 456 GLU A 463 -1 O ASN A 462 N VAL A 447 SHEET 1 H 2 GLU B 4 ILE B 6 0 SHEET 2 H 2 VAL B 366 ALA B 368 1 O ALA B 367 N GLU B 4 SHEET 1 I 8 VAL B 277 SER B 278 0 SHEET 2 I 8 VAL B 242 LEU B 243 1 N LEU B 243 O VAL B 277 SHEET 3 I 8 PHE B 213 TRP B 217 1 N TRP B 217 O VAL B 242 SHEET 4 I 8 ILE B 168 HIS B 174 1 N PHE B 170 O ALA B 216 SHEET 5 I 8 VAL B 107 GLY B 113 1 N VAL B 110 O ARG B 171 SHEET 6 I 8 VAL B 66 SER B 70 1 N PHE B 67 O VAL B 107 SHEET 7 I 8 ILE B 32 HIS B 37 1 N HIS B 36 O GLY B 68 SHEET 8 I 8 TYR B 318 THR B 321 1 O MSE B 319 N GLY B 35 SHEET 1 J 8 VAL B 277 SER B 278 0 SHEET 2 J 8 VAL B 242 LEU B 243 1 N LEU B 243 O VAL B 277 SHEET 3 J 8 PHE B 213 TRP B 217 1 N TRP B 217 O VAL B 242 SHEET 4 J 8 ILE B 168 HIS B 174 1 N PHE B 170 O ALA B 216 SHEET 5 J 8 VAL B 107 GLY B 113 1 N VAL B 110 O ARG B 171 SHEET 6 J 8 VAL B 66 SER B 70 1 N PHE B 67 O VAL B 107 SHEET 7 J 8 ILE B 32 HIS B 37 1 N HIS B 36 O GLY B 68 SHEET 8 J 8 THR B 352 LEU B 353 1 O LEU B 353 N PHE B 34 SHEET 1 K 2 ASP B 246 ASP B 249 0 SHEET 2 K 2 ARG B 282 VAL B 285 1 O ARG B 282 N THR B 247 SHEET 1 L 4 VAL B 374 SER B 379 0 SHEET 2 L 4 THR B 391 GLY B 398 -1 O ARG B 396 N HIS B 376 SHEET 3 L 4 TRP B 429 TRP B 433 -1 O TRP B 429 N VAL B 395 SHEET 4 L 4 ALA B 422 TYR B 423 -1 N ALA B 422 O THR B 430 SHEET 1 M 5 ARG B 385 VAL B 386 0 SHEET 2 M 5 GLY B 456 ALA B 466 1 O ALA B 465 N VAL B 386 SHEET 3 M 5 THR B 444 THR B 453 -1 N ALA B 451 O LEU B 458 SHEET 4 M 5 VAL B 402 ALA B 410 -1 N ALA B 410 O THR B 446 SHEET 5 M 5 VAL B 415 ASP B 420 -1 O VAL B 416 N VAL B 409 LINK C ARG A 265 N MSE A 266 1555 1555 1.33 LINK C MSE A 266 N ILE A 267 1555 1555 1.33 LINK C TYR A 318 N MSE A 319 1555 1555 1.33 LINK C MSE A 319 N GLU A 320 1555 1555 1.33 LINK C ARG B 265 N MSE B 266 1555 1555 1.33 LINK C MSE B 266 N ILE B 267 1555 1555 1.34 LINK C TYR B 318 N MSE B 319 1555 1555 1.33 LINK C MSE B 319 N GLU B 320 1555 1555 1.33 LINK O ASP B 349 MG MG B 476 1555 1555 2.27 LINK O ALA B 347 MG MG B 476 1555 1555 2.36 LINK O THR B 352 MG MG B 476 1555 1555 2.37 LINK OG1 THR B 352 MG MG B 476 1555 1555 2.38 LINK MG MG B 476 O HOH B 810 1555 1555 2.55 CISPEP 1 ARG A 79 PRO A 80 0 5.15 CISPEP 2 ALA A 177 GLY A 178 0 -11.53 CISPEP 3 SER A 379 PRO A 380 0 -0.44 CISPEP 4 ALA A 389 PRO A 390 0 -2.76 CISPEP 5 ARG B 79 PRO B 80 0 5.14 CISPEP 6 SER B 122 PHE B 123 0 -12.08 CISPEP 7 ALA B 177 GLY B 178 0 7.72 CISPEP 8 SER B 379 PRO B 380 0 1.86 SITE 1 AC1 4 ALA B 347 ASP B 349 THR B 352 HOH B 810 SITE 1 AC2 4 SER A 179 TRP A 180 PHE A 181 HOH B 788 SITE 1 AC3 5 GLY B 236 ASP B 237 ALA B 238 HOH B 560 SITE 2 AC3 5 HOH B 740 SITE 1 AC4 7 PHE B 117 VAL B 118 ASP B 129 THR B 130 SITE 2 AC4 7 TRP B 183 ALA B 185 HOH B 811 CRYST1 88.666 113.943 116.815 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011278 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008776 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008561 0.00000 MASTER 409 0 8 30 59 0 6 6 0 0 0 74 END