HEADER DNA BINDING PROTEIN/DNA 12-AUG-11 3TED TITLE CRYSTAL STRUCTURE OF THE CHD1 DNA-BINDING DOMAIN IN COMPLEX WITH A DNA TITLE 2 DUPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHROMO DOMAIN-CONTAINING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SANT/SLIDE DNA-BINDING DOMAIN, UNP RESIDUES 1006-1274; COMPND 5 SYNONYM: ATP-DEPENDENT HELICASE CHD1; COMPND 6 EC: 3.6.4.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-D(*CP*CP*AP*TP*AP*TP*AP*TP*AP*TP*GP*C)-3'; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: 5'-D(*GP*CP*AP*TP*AP*TP*AP*TP*AP*TP*GP*G)-3'; COMPND 14 CHAIN: C; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: CHD1, SYGP-ORF4, YER164W; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDEST17; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: ARTIFICIAL AT-RICH SEQUENCE; SYNTHESIZED BY SOURCE 14 INTEGRATED DNA TECHNOLOGIES; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 OTHER_DETAILS: ARTIFICIAL AT-RICH SEQUENCE; SYNTHESIZED BY SOURCE 18 INTEGRATED DNA TECHNOLOGIES KEYWDS PROTEIN-DNA COMPLEX, DOUBLE HELIX, DNA DUPLEX, SANT AND SLIDE KEYWDS 2 DOMAINS, CHROMATIN REMODELING, DNA BINDING, NUCLEAR, DNA BINDING KEYWDS 3 PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.SHARMA,K.R.JENKINS,A.HEROUX,G.D.BOWMAN REVDAT 1 02-NOV-11 3TED 0 JRNL AUTH A.SHARMA,K.R.JENKINS,A.HEROUX,G.D.BOWMAN JRNL TITL DNA-BINDING DOMAIN OF CHD1 IN COMPLEX WITH A DNA DUPLEX JRNL REF J.BIOL.CHEM. 2011 JRNL REFN ESSN 1083-351X REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 22413 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1214 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1571 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1857 REMARK 3 NUCLEIC ACID ATOMS : 486 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 169 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.45000 REMARK 3 B22 (A**2) : 0.11000 REMARK 3 B33 (A**2) : -0.51000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.74000 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.177 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.170 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.119 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.260 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2434 ; 0.007 ; 0.018 REMARK 3 BOND LENGTHS OTHERS (A): 1611 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3370 ; 1.120 ; 1.834 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3933 ; 1.270 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 227 ; 4.804 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 87 ;34.380 ;24.943 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 380 ;13.685 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;13.304 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 346 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2322 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 472 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1137 ; 0.396 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 463 ; 0.093 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1826 ; 0.742 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1297 ; 1.080 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1544 ; 1.635 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1006 A 1063 REMARK 3 ORIGIN FOR THE GROUP (A): 5.9759 13.5322 25.7692 REMARK 3 T TENSOR REMARK 3 T11: 0.1693 T22: 0.0359 REMARK 3 T33: 0.0691 T12: -0.0618 REMARK 3 T13: -0.0279 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 6.5891 L22: 2.6011 REMARK 3 L33: 4.2922 L12: 1.1312 REMARK 3 L13: 2.9932 L23: 0.8211 REMARK 3 S TENSOR REMARK 3 S11: -0.1312 S12: 0.1552 S13: 0.4582 REMARK 3 S21: -0.1490 S22: 0.0624 S23: -0.1335 REMARK 3 S31: -0.3919 S32: 0.3490 S33: 0.0688 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1064 A 1117 REMARK 3 ORIGIN FOR THE GROUP (A): -24.0903 4.3015 -0.0857 REMARK 3 T TENSOR REMARK 3 T11: 0.3019 T22: 0.3315 REMARK 3 T33: 0.1636 T12: -0.0740 REMARK 3 T13: -0.0035 T23: 0.0451 REMARK 3 L TENSOR REMARK 3 L11: 6.5500 L22: 3.8342 REMARK 3 L33: 5.3912 L12: 1.4178 REMARK 3 L13: 4.5498 L23: 1.0034 REMARK 3 S TENSOR REMARK 3 S11: 0.1614 S12: 0.1990 S13: -0.4079 REMARK 3 S21: -0.2445 S22: -0.0248 S23: 0.0855 REMARK 3 S31: 0.3926 S32: -0.4059 S33: -0.1366 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1118 A 1132 REMARK 3 ORIGIN FOR THE GROUP (A): -0.2099 11.0681 13.7996 REMARK 3 T TENSOR REMARK 3 T11: 0.2038 T22: 0.1322 REMARK 3 T33: 0.1184 T12: -0.0789 REMARK 3 T13: -0.0791 T23: 0.0828 REMARK 3 L TENSOR REMARK 3 L11: 12.0111 L22: 8.5122 REMARK 3 L33: 7.9698 L12: 3.3319 REMARK 3 L13: -1.3515 L23: 0.2374 REMARK 3 S TENSOR REMARK 3 S11: -0.2183 S12: 0.7344 S13: 0.3612 REMARK 3 S21: -0.6892 S22: 0.1278 S23: -0.3277 REMARK 3 S31: -0.3735 S32: 0.5044 S33: 0.0904 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1133 A 1266 REMARK 3 ORIGIN FOR THE GROUP (A): -6.8763 -6.9546 31.8164 REMARK 3 T TENSOR REMARK 3 T11: 0.0386 T22: 0.0176 REMARK 3 T33: 0.0402 T12: 0.0032 REMARK 3 T13: 0.0236 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 3.0011 L22: 5.6514 REMARK 3 L33: 3.3309 L12: -0.5891 REMARK 3 L13: -0.0460 L23: 0.9128 REMARK 3 S TENSOR REMARK 3 S11: -0.2230 S12: -0.0893 S13: -0.1391 REMARK 3 S21: 0.3040 S22: 0.1366 S23: 0.4231 REMARK 3 S31: 0.1448 S32: -0.1638 S33: 0.0864 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 12 REMARK 3 ORIGIN FOR THE GROUP (A): -3.4494 -8.0531 10.9382 REMARK 3 T TENSOR REMARK 3 T11: 0.1216 T22: 0.2135 REMARK 3 T33: 0.0439 T12: -0.0043 REMARK 3 T13: 0.0450 T23: -0.0331 REMARK 3 L TENSOR REMARK 3 L11: 2.7996 L22: 4.3702 REMARK 3 L33: 2.8025 L12: 1.9507 REMARK 3 L13: 2.2240 L23: 0.6287 REMARK 3 S TENSOR REMARK 3 S11: -0.1549 S12: 0.3063 S13: 0.0388 REMARK 3 S21: -0.3296 S22: 0.0082 S23: 0.0575 REMARK 3 S31: -0.0387 S32: 0.0842 S33: 0.1467 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 12 REMARK 3 ORIGIN FOR THE GROUP (A): -2.1013 -6.7437 11.2584 REMARK 3 T TENSOR REMARK 3 T11: 0.1536 T22: 0.1958 REMARK 3 T33: 0.0484 T12: -0.0017 REMARK 3 T13: -0.0338 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 5.4960 L22: 3.6494 REMARK 3 L33: 2.8177 L12: 2.3767 REMARK 3 L13: -1.9726 L23: -0.3882 REMARK 3 S TENSOR REMARK 3 S11: -0.2083 S12: 0.3021 S13: -0.0438 REMARK 3 S21: -0.3060 S22: 0.1132 S23: -0.2505 REMARK 3 S31: -0.0246 S32: 0.1219 S33: 0.0950 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3TED COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-AUG-11. REMARK 100 THE RCSB ID CODE IS RCSB067377. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 93.0 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22675 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 18.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07900 REMARK 200 FOR THE DATA SET : 37.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 15.00 REMARK 200 R MERGE FOR SHELL (I) : 0.76800 REMARK 200 R SYM FOR SHELL (I) : 0.76800 REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2XB0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14-18% PEG 400 0.1 M BISTRIS, PH REMARK 280 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.71300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1004 REMARK 465 PRO A 1005 REMARK 465 ASN A 1213 REMARK 465 GLU A 1214 REMARK 465 VAL A 1215 REMARK 465 HIS A 1216 REMARK 465 ASN A 1217 REMARK 465 PRO A 1218 REMARK 465 VAL A 1219 REMARK 465 ALA A 1220 REMARK 465 LYS A 1221 REMARK 465 LYS A 1222 REMARK 465 SER A 1223 REMARK 465 ALA A 1224 REMARK 465 SER A 1225 REMARK 465 SER A 1226 REMARK 465 SER A 1227 REMARK 465 ASP A 1228 REMARK 465 THR A 1229 REMARK 465 THR A 1230 REMARK 465 PRO A 1231 REMARK 465 THR A 1232 REMARK 465 PRO A 1233 REMARK 465 SER A 1234 REMARK 465 LYS A 1235 REMARK 465 LYS A 1236 REMARK 465 GLY A 1237 REMARK 465 LYS A 1238 REMARK 465 GLY A 1239 REMARK 465 ILE A 1240 REMARK 465 THR A 1241 REMARK 465 GLY A 1242 REMARK 465 SER A 1243 REMARK 465 SER A 1244 REMARK 465 GLY A 1267 REMARK 465 LEU A 1268 REMARK 465 ASN A 1269 REMARK 465 THR A 1270 REMARK 465 LYS A 1271 REMARK 465 SER A 1272 REMARK 465 PRO A 1273 REMARK 465 SER A 1274 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC B 1 C5' - C4' - C3' ANGL. DEV. = 7.7 DEGREES REMARK 500 DC B 1 C5' - C4' - O4' ANGL. DEV. = 8.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A1098 79.06 -159.20 REMARK 500 ASP A1154 87.25 -151.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XB0 RELATED DB: PDB REMARK 900 DNA-BINDING DOMAIN OF S.CEREVISIAE CHD1 REMARK 900 RELATED ID: 2YZ9 RELATED DB: PDB REMARK 900 DNA-BINDING DOMAIN OF S.CEREVISIAE ISW1A COMPLEX BOUND TO REMARK 900 DNA REMARK 900 RELATED ID: 1OFC RELATED DB: PDB REMARK 900 DNA-BINDING DOMAIN OF D.MELANOGASTER ISWI REMARK 900 RELATED ID: 2Y9Y RELATED DB: PDB REMARK 900 DNA-BINDING DOMAIN OF S.CEREVISIAE ISW1A COMPLEX REMARK 900 RELATED ID: 2NOG RELATED DB: PDB REMARK 900 SANT DOMAIN OF XENOPUS ISWI DBREF 3TED A 1006 1274 UNP P32657 CHD1_YEAST 1006 1274 DBREF 3TED B 1 12 PDB 3TED 3TED 1 12 DBREF 3TED C 1 12 PDB 3TED 3TED 1 12 SEQADV 3TED GLY A 1004 UNP P32657 EXPRESSION TAG SEQADV 3TED PRO A 1005 UNP P32657 EXPRESSION TAG SEQRES 1 A 271 GLY PRO ASP MET ASP SER ILE GLY GLU SER GLU VAL ARG SEQRES 2 A 271 ALA LEU TYR LYS ALA ILE LEU LYS PHE GLY ASN LEU LYS SEQRES 3 A 271 GLU ILE LEU ASP GLU LEU ILE ALA ASP GLY THR LEU PRO SEQRES 4 A 271 VAL LYS SER PHE GLU LYS TYR GLY GLU THR TYR ASP GLU SEQRES 5 A 271 MET MET GLU ALA ALA LYS ASP CYS VAL HIS GLU GLU GLU SEQRES 6 A 271 LYS ASN ARG LYS GLU ILE LEU GLU LYS LEU GLU LYS HIS SEQRES 7 A 271 ALA THR ALA TYR ARG ALA LYS LEU LYS SER GLY GLU ILE SEQRES 8 A 271 LYS ALA GLU ASN GLN PRO LYS ASP ASN PRO LEU THR ARG SEQRES 9 A 271 LEU SER LEU LYS LYS ARG GLU LYS LYS ALA VAL LEU PHE SEQRES 10 A 271 ASN PHE LYS GLY VAL LYS SER LEU ASN ALA GLU SER LEU SEQRES 11 A 271 LEU SER ARG VAL GLU ASP LEU LYS TYR LEU LYS ASN LEU SEQRES 12 A 271 ILE ASN SER ASN TYR LYS ASP ASP PRO LEU LYS PHE SER SEQRES 13 A 271 LEU GLY ASN ASN THR PRO LYS PRO VAL GLN ASN TRP SER SEQRES 14 A 271 SER ASN TRP THR LYS GLU GLU ASP GLU LYS LEU LEU ILE SEQRES 15 A 271 GLY VAL PHE LYS TYR GLY TYR GLY SER TRP THR GLN ILE SEQRES 16 A 271 ARG ASP ASP PRO PHE LEU GLY ILE THR ASP LYS ILE PHE SEQRES 17 A 271 LEU ASN GLU VAL HIS ASN PRO VAL ALA LYS LYS SER ALA SEQRES 18 A 271 SER SER SER ASP THR THR PRO THR PRO SER LYS LYS GLY SEQRES 19 A 271 LYS GLY ILE THR GLY SER SER LYS LYS VAL PRO GLY ALA SEQRES 20 A 271 ILE HIS LEU GLY ARG ARG VAL ASP TYR LEU LEU SER PHE SEQRES 21 A 271 LEU ARG GLY GLY LEU ASN THR LYS SER PRO SER SEQRES 1 B 12 DC DC DA DT DA DT DA DT DA DT DG DC SEQRES 1 C 12 DG DC DA DT DA DT DA DT DA DT DG DG FORMUL 4 HOH *169(H2 O) HELIX 1 1 GLY A 1011 GLY A 1026 1 16 HELIX 2 2 LEU A 1028 GLU A 1030 5 3 HELIX 3 3 ILE A 1031 ASP A 1038 1 8 HELIX 4 4 SER A 1045 GLY A 1092 1 48 HELIX 5 5 ASN A 1103 GLU A 1114 1 12 HELIX 6 6 ALA A 1130 TYR A 1151 1 22 HELIX 7 7 ASP A 1154 PHE A 1158 5 5 HELIX 8 8 THR A 1176 GLY A 1191 1 16 HELIX 9 9 SER A 1194 ASP A 1201 1 8 HELIX 10 10 ILE A 1206 ILE A 1210 5 5 HELIX 11 11 GLY A 1249 GLY A 1266 1 18 SHEET 1 A 2 LEU A1119 PHE A1122 0 SHEET 2 A 2 VAL A1125 ASN A1129 -1 O VAL A1125 N PHE A1122 CISPEP 1 VAL A 1247 PRO A 1248 0 9.12 CRYST1 38.670 61.426 76.771 90.00 104.17 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025860 0.000000 0.006529 0.00000 SCALE2 0.000000 0.016280 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013435 0.00000 MASTER 434 0 0 11 2 0 0 6 0 0 0 23 END