HEADER PHOTOSYNTHESIS 21-JUL-11 3T15 TITLE STRUCTURE OF GREEN-TYPE RUBISCO ACTIVASE FROM TOBACCO COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE 1, COMPND 3 CHLOROPLASTIC; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: RA 1, RUBISCO ACTIVASE 1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; SOURCE 3 ORGANISM_COMMON: AMERICAN TOBACCO,TOBACCO; SOURCE 4 ORGANISM_TAXID: 4097; SOURCE 5 GENE: RCA1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHUE KEYWDS PHOTOSYNTHESIS, RUBISCO ACTIVASE, AAA+ PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.STOTZ,P.WENDLER,O.MUELLER-CAJAR,F.U.HARTL,A.BRACHER,M.HAYER-HARTL REVDAT 6 18-DEC-19 3T15 1 REMARK REVDAT 5 20-NOV-19 3T15 1 REMARK REVDAT 4 30-JUL-14 3T15 1 REMARK REVDAT 3 28-DEC-11 3T15 1 JRNL REVDAT 2 23-NOV-11 3T15 1 JRNL REVDAT 1 09-NOV-11 3T15 0 JRNL AUTH M.STOTZ,O.MUELLER-CAJAR,S.CINIAWSKY,P.WENDLER,F.U.HARTL, JRNL AUTH 2 A.BRACHER,M.HAYER-HARTL JRNL TITL STRUCTURE OF GREEN-TYPE RUBISCO ACTIVASE FROM TOBACCO. JRNL REF NAT.STRUCT.MOL.BIOL. V. 18 1366 2011 JRNL REFN ISSN 1545-9993 JRNL PMID 22056769 JRNL DOI 10.1038/NSMB.2171 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 7051 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 350 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 494 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 27 REMARK 3 BIN FREE R VALUE : 0.3950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1919 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 117.6 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.81000 REMARK 3 B22 (A**2) : 1.81000 REMARK 3 B33 (A**2) : -2.71000 REMARK 3 B12 (A**2) : 0.90000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.463 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.406 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 47.761 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1954 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2657 ; 1.449 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 258 ; 6.810 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 78 ;41.059 ;24.744 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 285 ;21.922 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;14.891 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 307 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1491 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 985 ; 0.267 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1362 ; 0.322 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 63 ; 0.143 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 36 ; 0.192 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.228 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1330 ; 0.435 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2058 ; 0.771 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 705 ; 1.185 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 599 ; 1.983 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 68 A 79 REMARK 3 ORIGIN FOR THE GROUP (A): 30.8417 35.4545 -4.7065 REMARK 3 T TENSOR REMARK 3 T11: 0.0811 T22: -0.1078 REMARK 3 T33: 0.3079 T12: -0.0606 REMARK 3 T13: -0.1412 T23: 0.1346 REMARK 3 L TENSOR REMARK 3 L11: 32.3803 L22: 2.7120 REMARK 3 L33: 19.6165 L12: -8.2345 REMARK 3 L13: 8.4307 L23: 1.1371 REMARK 3 S TENSOR REMARK 3 S11: -0.4032 S12: 0.4364 S13: 1.6888 REMARK 3 S21: -0.3394 S22: 0.0345 S23: -3.2018 REMARK 3 S31: -0.7891 S32: 0.4721 S33: 0.3687 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 80 A 141 REMARK 3 RESIDUE RANGE : A 145 A 176 REMARK 3 RESIDUE RANGE : A 219 A 234 REMARK 3 RESIDUE RANGE : A 237 A 252 REMARK 3 ORIGIN FOR THE GROUP (A): 13.9145 32.1544 3.3552 REMARK 3 T TENSOR REMARK 3 T11: 0.1937 T22: 0.1573 REMARK 3 T33: -0.1941 T12: 0.0920 REMARK 3 T13: -0.0591 T23: -0.0488 REMARK 3 L TENSOR REMARK 3 L11: 6.1540 L22: 5.1663 REMARK 3 L33: 4.8272 L12: -2.5420 REMARK 3 L13: 1.2179 L23: -0.9179 REMARK 3 S TENSOR REMARK 3 S11: -0.6501 S12: -1.0044 S13: -0.4634 REMARK 3 S21: 1.1417 S22: 0.3179 S23: 0.4227 REMARK 3 S31: 0.5383 S32: -0.5694 S33: 0.3322 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 191 A 207 REMARK 3 ORIGIN FOR THE GROUP (A): 1.2242 28.8378 8.7897 REMARK 3 T TENSOR REMARK 3 T11: 0.5612 T22: 0.8335 REMARK 3 T33: 0.1979 T12: 0.0555 REMARK 3 T13: 0.3637 T23: 0.0486 REMARK 3 L TENSOR REMARK 3 L11: 17.1131 L22: 9.4276 REMARK 3 L33: 14.0082 L12: 12.0276 REMARK 3 L13: 11.6827 L23: 5.7867 REMARK 3 S TENSOR REMARK 3 S11: -0.6504 S12: -0.5978 S13: -0.9008 REMARK 3 S21: 0.9362 S22: 0.3379 S23: 3.6836 REMARK 3 S31: 0.1448 S32: -1.3814 S33: 0.3125 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 253 A 360 REMARK 3 ORIGIN FOR THE GROUP (A): 41.2302 14.4512 -3.6981 REMARK 3 T TENSOR REMARK 3 T11: 0.1147 T22: -0.0793 REMARK 3 T33: -0.0813 T12: 0.0590 REMARK 3 T13: -0.0557 T23: 0.0866 REMARK 3 L TENSOR REMARK 3 L11: 3.5576 L22: 3.3928 REMARK 3 L33: 3.4250 L12: -1.5252 REMARK 3 L13: 1.3784 L23: -2.2792 REMARK 3 S TENSOR REMARK 3 S11: 0.1569 S12: 0.3346 S13: 0.0353 REMARK 3 S21: 0.0312 S22: -0.4423 S23: -0.6608 REMARK 3 S31: 0.2495 S32: 0.1997 S33: 0.2854 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3T15 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-11. REMARK 100 THE DEPOSITION ID IS D_1000066905. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7453 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.949 REMARK 200 RESOLUTION RANGE LOW (A) : 51.848 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.50500 REMARK 200 R SYM FOR SHELL (I) : 0.50500 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHELX, RESOLVE 2.13, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MES-NA PH 6.0 AND 350 MM REMARK 280 MAGNESIUM FORMATE, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.78333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.89167 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.33750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 9.44583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.22917 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE ANALYSIS OF THE CBBX PROTEIN IN SOLUTION AND EM STUDIES REMARK 300 SUGGEST THAT THE BIOLOGICALLY ACTIVE OLIGOMER IS A HEXAMER, BUT IT REMARK 300 CANNOT BE GENERATED BY THE APPLICATION OF SYMMETRY OPERATORS TO THE REMARK 300 CHAINS IN THE COORDINATE FILE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 142 REMARK 465 ASN A 143 REMARK 465 ALA A 144 REMARK 465 ALA A 177 REMARK 465 GLY A 178 REMARK 465 ALA A 179 REMARK 465 GLY A 180 REMARK 465 ARG A 181 REMARK 465 MET A 182 REMARK 465 GLY A 183 REMARK 465 GLY A 184 REMARK 465 THR A 185 REMARK 465 THR A 186 REMARK 465 GLN A 187 REMARK 465 TYR A 188 REMARK 465 THR A 189 REMARK 465 VAL A 190 REMARK 465 ASN A 208 REMARK 465 VAL A 209 REMARK 465 GLN A 210 REMARK 465 LEU A 211 REMARK 465 PRO A 212 REMARK 465 GLY A 213 REMARK 465 MET A 214 REMARK 465 TYR A 215 REMARK 465 ASN A 216 REMARK 465 LYS A 217 REMARK 465 GLN A 218 REMARK 465 LEU A 235 REMARK 465 TYR A 236 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 68 CG OD1 ND2 REMARK 470 ASP A 74 CG OD1 OD2 REMARK 470 LYS A 96 CG CD CE NZ REMARK 470 LYS A 112 CG CD CE NZ REMARK 470 ARG A 125 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 139 CG CD1 CD2 REMARK 470 GLU A 140 CG CD OE1 OE2 REMARK 470 SER A 141 OG REMARK 470 GLU A 146 CG CD OE1 OE2 REMARK 470 LYS A 149 CG CD CE NZ REMARK 470 LEU A 150 CG CD1 CD2 REMARK 470 GLN A 153 CG CD OE1 NE2 REMARK 470 ARG A 154 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 156 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 160 CG CD OE1 OE2 REMARK 470 ILE A 162 CG1 CG2 CD1 REMARK 470 ARG A 163 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 164 CG CD CE NZ REMARK 470 ASN A 191 CG OD1 ND2 REMARK 470 GLN A 193 CG CD OE1 NE2 REMARK 470 ASN A 201 CG OD1 ND2 REMARK 470 THR A 207 OG1 CG2 REMARK 470 GLU A 219 CG CD OE1 OE2 REMARK 470 SER A 233 OG REMARK 470 THR A 234 OG1 CG2 REMARK 470 LEU A 239 CG CD1 CD2 REMARK 470 ARG A 241 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 242 CG OD1 OD2 REMARK 470 ARG A 244 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 247 CG CD CE NZ REMARK 470 LYS A 277 CG CD CE NZ REMARK 470 GLU A 312 CG CD OE1 OE2 REMARK 470 LYS A 313 CG CD CE NZ REMARK 470 LYS A 317 CG CD CE NZ REMARK 470 GLU A 329 CG CD OE1 OE2 REMARK 470 LYS A 332 CG CD CE NZ REMARK 470 GLU A 340 CG CD OE1 OE2 REMARK 470 GLN A 347 CG CD OE1 NE2 REMARK 470 GLU A 350 CG CD OE1 OE2 REMARK 470 LYS A 353 CG CD CE NZ REMARK 470 LEU A 357 CG CD1 CD2 REMARK 470 ASP A 359 CG OD1 OD2 REMARK 470 LYS A 360 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 157 CD GLU A 157 OE1 0.083 REMARK 500 GLU A 157 CD GLU A 157 OE2 0.073 REMARK 500 THR A 207 C THR A 207 O 0.250 REMARK 500 GLU A 219 CA GLU A 219 CB 0.133 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 74 62.87 39.82 REMARK 500 ALA A 148 -73.98 -66.25 REMARK 500 ASN A 166 143.99 62.37 REMARK 500 ASP A 174 142.96 79.83 REMARK 500 LEU A 175 115.98 -164.96 REMARK 500 PRO A 206 -87.30 -59.48 REMARK 500 ASN A 220 -149.27 -134.13 REMARK 500 ALA A 221 158.08 172.47 REMARK 500 ASN A 230 -62.75 -99.32 REMARK 500 PHE A 232 84.73 -68.72 REMARK 500 PRO A 238 -50.65 -23.22 REMARK 500 ARG A 244 38.12 -147.48 REMARK 500 ASN A 269 67.33 38.26 REMARK 500 PRO A 271 135.90 -38.29 REMARK 500 LYS A 313 51.98 -100.80 REMARK 500 LEU A 319 -72.19 -133.99 REMARK 500 ASN A 320 35.81 -78.41 REMARK 500 THR A 327 107.65 3.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ZW6 RELATED DB: PDB REMARK 900 RELATED ID: EMD-1940 RELATED DB: EMDB DBREF 3T15 A 68 360 UNP Q40460 RCA1_TOBAC 127 419 SEQRES 1 A 293 ASN LEU ASP ASN LYS LEU ASP GLY PHE TYR ILE ALA PRO SEQRES 2 A 293 ALA PHE MET ASP LYS LEU VAL VAL HIS ILE THR LYS ASN SEQRES 3 A 293 PHE LEU LYS LEU PRO ASN ILE LYS VAL PRO LEU ILE LEU SEQRES 4 A 293 GLY ILE TRP GLY GLY LYS GLY GLN GLY LYS SER PHE GLN SEQRES 5 A 293 CYS GLU LEU VAL PHE ARG LYS MET GLY ILE ASN PRO ILE SEQRES 6 A 293 MET MET SER ALA GLY GLU LEU GLU SER GLY ASN ALA GLY SEQRES 7 A 293 GLU PRO ALA LYS LEU ILE ARG GLN ARG TYR ARG GLU ALA SEQRES 8 A 293 ALA GLU ILE ILE ARG LYS GLY ASN MET CYS CYS LEU PHE SEQRES 9 A 293 ILE ASN ASP LEU ASP ALA GLY ALA GLY ARG MET GLY GLY SEQRES 10 A 293 THR THR GLN TYR THR VAL ASN ASN GLN MET VAL ASN ALA SEQRES 11 A 293 THR LEU MET ASN ILE ALA ASP ASN PRO THR ASN VAL GLN SEQRES 12 A 293 LEU PRO GLY MET TYR ASN LYS GLN GLU ASN ALA ARG VAL SEQRES 13 A 293 PRO ILE ILE VAL THR GLY ASN ASP PHE SER THR LEU TYR SEQRES 14 A 293 ALA PRO LEU ILE ARG ASP GLY ARG MET GLU LYS PHE TYR SEQRES 15 A 293 TRP ALA PRO THR ARG GLU ASP ARG ILE GLY VAL CYS THR SEQRES 16 A 293 GLY ILE PHE ARG THR ASP ASN VAL PRO ALA GLU ASP VAL SEQRES 17 A 293 VAL LYS ILE VAL ASP ASN PHE PRO GLY GLN SER ILE ASP SEQRES 18 A 293 PHE PHE GLY ALA LEU ARG ALA ARG VAL TYR ASP ASP GLU SEQRES 19 A 293 VAL ARG LYS TRP VAL SER GLY THR GLY ILE GLU LYS ILE SEQRES 20 A 293 GLY ASP LYS LEU LEU ASN SER PHE ASP GLY PRO PRO THR SEQRES 21 A 293 PHE GLU GLN PRO LYS MET THR ILE GLU LYS LEU LEU GLU SEQRES 22 A 293 TYR GLY ASN MET LEU VAL GLN GLU GLN GLU ASN VAL LYS SEQRES 23 A 293 ARG VAL GLN LEU ALA ASP LYS HELIX 1 1 ALA A 79 ASN A 93 1 15 HELIX 2 2 GLY A 115 MET A 127 1 13 HELIX 3 3 ALA A 136 SER A 141 1 6 HELIX 4 4 GLY A 145 ARG A 163 1 19 HELIX 5 5 ASN A 191 ASN A 205 1 15 HELIX 6 6 ALA A 237 ARG A 244 1 8 HELIX 7 7 THR A 253 ARG A 266 1 14 HELIX 8 8 THR A 267 ASN A 269 5 3 HELIX 9 9 PRO A 271 PHE A 282 1 12 HELIX 10 10 SER A 286 THR A 309 1 24 HELIX 11 11 ILE A 314 LEU A 319 1 6 HELIX 12 12 THR A 334 LYS A 360 1 27 SHEET 1 A 2 LYS A 72 LEU A 73 0 SHEET 2 A 2 PHE A 76 TYR A 77 -1 O PHE A 76 N LEU A 73 SHEET 1 B 5 ILE A 132 SER A 135 0 SHEET 2 B 5 LEU A 170 ASN A 173 1 O PHE A 171 N ILE A 132 SHEET 3 B 5 ILE A 225 THR A 228 1 O ILE A 226 N LEU A 170 SHEET 4 B 5 ILE A 105 GLY A 110 1 N ILE A 108 O VAL A 227 SHEET 5 B 5 MET A 245 TRP A 250 1 O TRP A 250 N TRP A 109 CRYST1 103.635 103.635 56.675 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009649 0.005571 0.000000 0.00000 SCALE2 0.000000 0.011142 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017644 0.00000 MASTER 469 0 0 12 7 0 0 6 0 0 0 23 END