HEADER MEMBRANE PROTEIN 18-JUL-11 3SZD TITLE CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA OCCK2 (OPDF) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PORIN; COMPND 3 CHAIN: B, A; COMPND 4 FRAGMENT: UNP RESIDUES 25-421; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: PA0240; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-BARREL, CHANNEL, BACTERIAL OUTER MEMBRANE, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.VAN DEN BERG,E.EREN REVDAT 1 08-FEB-12 3SZD 0 JRNL AUTH E.EREN,J.VIJAYARAGHAVAN,J.LIU,B.R.CHENEKE,D.S.TOUW, JRNL AUTH 2 B.W.LEPORE,M.INDIC,L.MOVILEANU,B.VAN DEN BERG JRNL TITL SUBSTRATE SPECIFICITY WITHIN A FAMILY OF OUTER MEMBRANE JRNL TITL 2 CARBOXYLATE CHANNELS. JRNL REF PLOS BIOL. V. 10 01242 2012 JRNL REFN ISSN 1544-9173 JRNL PMID 22272184 JRNL DOI 10.1371/JOURNAL.PBIO.1001242 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 3 NUMBER OF REFLECTIONS : 37591 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.810 REMARK 3 FREE R VALUE TEST SET COUNT : 2241 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 14.9950 - 5.7202 1.00 2451 150 0.2927 0.3150 REMARK 3 2 5.7202 - 4.5829 1.00 2461 154 0.2147 0.2514 REMARK 3 3 4.5829 - 4.0163 0.95 2325 151 0.1959 0.2162 REMARK 3 4 4.0163 - 3.6549 0.91 2230 127 0.2117 0.2567 REMARK 3 5 3.6549 - 3.3962 0.90 2211 136 0.2091 0.2403 REMARK 3 6 3.3962 - 3.1980 0.90 2218 132 0.2173 0.2924 REMARK 3 7 3.1980 - 3.0393 0.91 2191 135 0.2280 0.3020 REMARK 3 8 3.0393 - 2.9080 0.91 2220 138 0.2257 0.2983 REMARK 3 9 2.9080 - 2.7968 0.91 2253 135 0.2192 0.3276 REMARK 3 10 2.7968 - 2.7008 0.92 2245 141 0.2239 0.2992 REMARK 3 11 2.7008 - 2.6168 0.92 2259 130 0.2148 0.3023 REMARK 3 12 2.6168 - 2.5424 0.93 2252 150 0.2233 0.2912 REMARK 3 13 2.5424 - 2.4758 0.93 2271 143 0.2344 0.3437 REMARK 3 14 2.4758 - 2.4156 0.92 2269 137 0.2492 0.3215 REMARK 3 15 2.4156 - 2.3609 0.95 2303 147 0.2532 0.3647 REMARK 3 16 2.3609 - 2.3109 0.90 2191 135 0.2531 0.3281 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.49 REMARK 3 K_SOL : 0.41 REMARK 3 B_SOL : 39.07 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.790 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.97540 REMARK 3 B22 (A**2) : -1.45680 REMARK 3 B33 (A**2) : 5.43210 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : 5.66240 REMARK 3 B23 (A**2) : -0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5997 REMARK 3 ANGLE : 1.190 8060 REMARK 3 CHIRALITY : 0.079 803 REMARK 3 PLANARITY : 0.004 1059 REMARK 3 DIHEDRAL : 17.438 2185 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3SZD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUL-11. REMARK 100 THE RCSB ID CODE IS RCSB066841. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37591 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.310 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.31 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 1K 50 MM LI2SO4 50 MM NA2SO4 REMARK 280 50 MM NA-ACETATE, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 103.44950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 1 REMARK 465 HIS B 2 REMARK 465 VAL B 3 REMARK 465 HIS B 4 REMARK 465 ALA B 5 REMARK 465 GLY B 6 REMARK 465 ASP B 31 REMARK 465 ALA B 32 REMARK 465 SER B 33 REMARK 465 GLN B 34 REMARK 465 LYS B 75 REMARK 465 GLY B 76 REMARK 465 THR B 77 REMARK 465 ALA B 78 REMARK 465 GLY B 79 REMARK 465 THR B 80 REMARK 465 GLN B 81 REMARK 465 LEU B 82 REMARK 465 LEU B 83 REMARK 465 PRO B 84 REMARK 465 ILE B 85 REMARK 465 HIS B 86 REMARK 465 ASP B 87 REMARK 465 ASP B 88 REMARK 465 GLY B 89 REMARK 465 ARG B 90 REMARK 465 PRO B 91 REMARK 465 GLY B 399 REMARK 465 HIS B 400 REMARK 465 HIS B 401 REMARK 465 HIS B 402 REMARK 465 HIS B 403 REMARK 465 HIS B 404 REMARK 465 HIS B 405 REMARK 465 GLY A 1 REMARK 465 HIS A 2 REMARK 465 VAL A 3 REMARK 465 HIS A 4 REMARK 465 ALA A 5 REMARK 465 ASP A 31 REMARK 465 ALA A 32 REMARK 465 SER A 33 REMARK 465 GLN A 34 REMARK 465 LYS A 75 REMARK 465 GLY A 76 REMARK 465 THR A 77 REMARK 465 ALA A 78 REMARK 465 GLY A 79 REMARK 465 THR A 80 REMARK 465 GLN A 81 REMARK 465 LEU A 82 REMARK 465 LEU A 83 REMARK 465 PRO A 84 REMARK 465 ILE A 85 REMARK 465 HIS A 86 REMARK 465 ASP A 87 REMARK 465 ASP A 88 REMARK 465 GLY A 89 REMARK 465 ARG A 90 REMARK 465 PRO A 91 REMARK 465 SER A 379 REMARK 465 ASN A 380 REMARK 465 THR A 381 REMARK 465 GLY A 398 REMARK 465 GLY A 399 REMARK 465 HIS A 400 REMARK 465 HIS A 401 REMARK 465 HIS A 402 REMARK 465 HIS A 403 REMARK 465 HIS A 404 REMARK 465 HIS A 405 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 14 CD CE NZ REMARK 470 VAL B 29 CB CG1 CG2 REMARK 470 LYS B 246 CE NZ REMARK 470 LYS B 362 NZ REMARK 470 SER B 379 CB OG REMARK 470 VAL A 29 CB CG1 CG2 REMARK 470 GLU A 39 CG CD OE1 OE2 REMARK 470 ASP A 72 CG OD1 OD2 REMARK 470 GLU A 194 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 385 NH1 ARG B 387 1.95 REMARK 500 O GLY A 128 O HOH A 530 1.98 REMARK 500 OD1 ASP B 248 NH2 ARG B 250 1.99 REMARK 500 OD1 ASP A 248 NH2 ARG A 250 2.00 REMARK 500 N GLY B 35 O HOH B 487 2.01 REMARK 500 N GLY B 35 O HOH B 479 2.02 REMARK 500 OD2 ASP B 163 O HOH B 448 2.06 REMARK 500 O HOH A 478 O HOH A 524 2.07 REMARK 500 O LEU A 148 O HOH A 463 2.13 REMARK 500 OG SER A 16 O HOH A 533 2.13 REMARK 500 OE1 GLU A 144 O HOH A 486 2.14 REMARK 500 OE1 GLU A 110 O HOH A 521 2.15 REMARK 500 NH2 ARG B 190 O HOH B 523 2.16 REMARK 500 OH TYR A 67 OD2 ASP A 94 2.16 REMARK 500 OG SER B 130 O HOH B 508 2.18 REMARK 500 NE2 GLN A 212 O HOH A 417 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 73 N - CA - C ANGL. DEV. = -15.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 72 101.08 101.11 REMARK 500 SER B 107 -121.83 66.66 REMARK 500 TRP B 116 -170.00 -167.18 REMARK 500 LEU B 123 87.20 -163.85 REMARK 500 ASP B 127 46.47 -151.43 REMARK 500 ARG B 129 -112.88 -80.71 REMARK 500 ILE B 208 -69.63 -125.91 REMARK 500 ASP B 342 67.42 -165.50 REMARK 500 SER B 358 -164.00 -169.88 REMARK 500 ARG B 363 -10.21 82.91 REMARK 500 GLN A 7 141.37 99.95 REMARK 500 ASP A 72 41.99 73.29 REMARK 500 SER A 107 -117.81 58.71 REMARK 500 LEU A 123 90.66 -163.48 REMARK 500 ASP A 127 45.65 -148.65 REMARK 500 ARG A 129 -134.45 -103.73 REMARK 500 ILE A 208 -62.14 -127.11 REMARK 500 ASP A 342 59.61 -166.15 REMARK 500 ARG A 363 -5.02 85.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 72 GLY A 73 140.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 497 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH A 508 DISTANCE = 8.10 ANGSTROMS REMARK 525 HOH A 531 DISTANCE = 8.01 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 C8E B 406 REMARK 610 C8E B 407 REMARK 610 C8E B 408 REMARK 610 3PE A 406 REMARK 610 C8E A 407 REMARK 610 C8E A 408 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E B 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3PE A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C8E A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 410 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SY7 RELATED DB: PDB REMARK 900 RELATED ID: 3SY9 RELATED DB: PDB REMARK 900 RELATED ID: 3SYB RELATED DB: PDB REMARK 900 RELATED ID: 3SYS RELATED DB: PDB REMARK 900 RELATED ID: 3SZV RELATED DB: PDB REMARK 900 RELATED ID: 3T0S RELATED DB: PDB REMARK 900 RELATED ID: 3T20 RELATED DB: PDB REMARK 900 RELATED ID: 3T24 RELATED DB: PDB DBREF 3SZD B 1 397 UNP Q9I6P8 Q9I6P8_PSEAE 25 421 DBREF 3SZD A 1 397 UNP Q9I6P8 Q9I6P8_PSEAE 25 421 SEQADV 3SZD GLY B 398 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD GLY B 399 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD HIS B 400 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD HIS B 401 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD HIS B 402 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD HIS B 403 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD HIS B 404 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD HIS B 405 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD GLY A 398 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD GLY A 399 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD HIS A 400 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD HIS A 401 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD HIS A 402 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD HIS A 403 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD HIS A 404 UNP Q9I6P8 EXPRESSION TAG SEQADV 3SZD HIS A 405 UNP Q9I6P8 EXPRESSION TAG SEQRES 1 B 405 GLY HIS VAL HIS ALA GLY GLN GLY PHE LEU GLU ASP ALA SEQRES 2 B 405 LYS ALA SER LEU THR ALA ARG ASN PHE HIS LEU HIS ARG SEQRES 3 B 405 ASN PHE VAL GLY ASP ALA SER GLN GLY LYS ALA GLU GLU SEQRES 4 B 405 TRP THR GLN SER PHE ILE LEU ASP ALA ARG SER GLY PHE SEQRES 5 B 405 THR GLN GLY SER VAL GLY PHE GLY LEU ASP VAL LEU GLY SEQRES 6 B 405 LEU TYR SER LEU LYS LEU ASP GLY GLY LYS GLY THR ALA SEQRES 7 B 405 GLY THR GLN LEU LEU PRO ILE HIS ASP ASP GLY ARG PRO SEQRES 8 B 405 ALA ASP ASP PHE GLY ARG LEU ALA VAL ALA GLY LYS LEU SEQRES 9 B 405 ARG VAL SER ASN SER GLU LEU LYS ILE GLY GLU TRP MET SEQRES 10 B 405 PRO VAL LEU PRO ILE LEU ARG SER ASP ASP GLY ARG SER SEQRES 11 B 405 LEU PRO GLN THR PHE ARG GLY GLY GLN LEU SER ALA ASN SEQRES 12 B 405 GLU ILE ALA GLY LEU THR LEU TYR ALA GLY GLN PHE ARG SEQRES 13 B 405 GLY ASN SER PRO ARG ASN ASP ALA SER MET GLN ASP MET SEQRES 14 B 405 SER LEU PHE GLY ARG PRO ALA ALA THR SER ASP ARG PHE SEQRES 15 B 405 ASP PHE ALA GLY GLY GLU TYR ARG PHE ASN GLY GLU ARG SEQRES 16 B 405 SER LEU LEU GLY LEU TRP ASN ALA GLU LEU LYS ASP ILE SEQRES 17 B 405 TYR ARG GLN GLN TYR LEU GLN LEU GLN HIS SER GLN PRO SEQRES 18 B 405 LEU GLY ASP TRP LEU LEU GLY ALA ASN LEU GLY GLY PHE SEQRES 19 B 405 ARG GLY ARG ASP ALA GLY SER ALA ARG ALA GLY LYS LEU SEQRES 20 B 405 ASP ASN ARG THR VAL SER ALA LEU PHE SER ALA ARG TYR SEQRES 21 B 405 GLY LEU HIS THR LEU TYR LEU GLY LEU GLN LYS VAL SER SEQRES 22 B 405 GLY ASP ASP GLY TRP MET ARG VAL ASN GLY THR SER GLY SEQRES 23 B 405 GLY THR LEU ALA ASN ASP SER TYR ASN ALA SER TYR ASP SEQRES 24 B 405 ASN PRO GLY GLU ARG SER TRP GLN LEU ARG TYR ASP PHE SEQRES 25 B 405 ASP PHE VAL GLY LEU GLY LEU PRO GLY LEU THR PHE MET SEQRES 26 B 405 THR ARG TYR LEU HIS GLY ASP HIS VAL ARG LEU ALA GLY SEQRES 27 B 405 VAL THR ASP ASP GLY SER GLU TRP GLY ARG GLU SER GLU SEQRES 28 B 405 LEU GLY TYR THR LEU GLN SER GLY ALA PHE LYS ARG LEU SEQRES 29 B 405 ASN VAL ARG TRP ARG ASN SER SER GLN ARG ARG ASP TRP SEQRES 30 B 405 GLY SER ASN THR ARG PHE ASP GLU ASN ARG LEU ILE VAL SEQRES 31 B 405 SER TYR PRO LEU SER LEU LEU GLY GLY HIS HIS HIS HIS SEQRES 32 B 405 HIS HIS SEQRES 1 A 405 GLY HIS VAL HIS ALA GLY GLN GLY PHE LEU GLU ASP ALA SEQRES 2 A 405 LYS ALA SER LEU THR ALA ARG ASN PHE HIS LEU HIS ARG SEQRES 3 A 405 ASN PHE VAL GLY ASP ALA SER GLN GLY LYS ALA GLU GLU SEQRES 4 A 405 TRP THR GLN SER PHE ILE LEU ASP ALA ARG SER GLY PHE SEQRES 5 A 405 THR GLN GLY SER VAL GLY PHE GLY LEU ASP VAL LEU GLY SEQRES 6 A 405 LEU TYR SER LEU LYS LEU ASP GLY GLY LYS GLY THR ALA SEQRES 7 A 405 GLY THR GLN LEU LEU PRO ILE HIS ASP ASP GLY ARG PRO SEQRES 8 A 405 ALA ASP ASP PHE GLY ARG LEU ALA VAL ALA GLY LYS LEU SEQRES 9 A 405 ARG VAL SER ASN SER GLU LEU LYS ILE GLY GLU TRP MET SEQRES 10 A 405 PRO VAL LEU PRO ILE LEU ARG SER ASP ASP GLY ARG SER SEQRES 11 A 405 LEU PRO GLN THR PHE ARG GLY GLY GLN LEU SER ALA ASN SEQRES 12 A 405 GLU ILE ALA GLY LEU THR LEU TYR ALA GLY GLN PHE ARG SEQRES 13 A 405 GLY ASN SER PRO ARG ASN ASP ALA SER MET GLN ASP MET SEQRES 14 A 405 SER LEU PHE GLY ARG PRO ALA ALA THR SER ASP ARG PHE SEQRES 15 A 405 ASP PHE ALA GLY GLY GLU TYR ARG PHE ASN GLY GLU ARG SEQRES 16 A 405 SER LEU LEU GLY LEU TRP ASN ALA GLU LEU LYS ASP ILE SEQRES 17 A 405 TYR ARG GLN GLN TYR LEU GLN LEU GLN HIS SER GLN PRO SEQRES 18 A 405 LEU GLY ASP TRP LEU LEU GLY ALA ASN LEU GLY GLY PHE SEQRES 19 A 405 ARG GLY ARG ASP ALA GLY SER ALA ARG ALA GLY LYS LEU SEQRES 20 A 405 ASP ASN ARG THR VAL SER ALA LEU PHE SER ALA ARG TYR SEQRES 21 A 405 GLY LEU HIS THR LEU TYR LEU GLY LEU GLN LYS VAL SER SEQRES 22 A 405 GLY ASP ASP GLY TRP MET ARG VAL ASN GLY THR SER GLY SEQRES 23 A 405 GLY THR LEU ALA ASN ASP SER TYR ASN ALA SER TYR ASP SEQRES 24 A 405 ASN PRO GLY GLU ARG SER TRP GLN LEU ARG TYR ASP PHE SEQRES 25 A 405 ASP PHE VAL GLY LEU GLY LEU PRO GLY LEU THR PHE MET SEQRES 26 A 405 THR ARG TYR LEU HIS GLY ASP HIS VAL ARG LEU ALA GLY SEQRES 27 A 405 VAL THR ASP ASP GLY SER GLU TRP GLY ARG GLU SER GLU SEQRES 28 A 405 LEU GLY TYR THR LEU GLN SER GLY ALA PHE LYS ARG LEU SEQRES 29 A 405 ASN VAL ARG TRP ARG ASN SER SER GLN ARG ARG ASP TRP SEQRES 30 A 405 GLY SER ASN THR ARG PHE ASP GLU ASN ARG LEU ILE VAL SEQRES 31 A 405 SER TYR PRO LEU SER LEU LEU GLY GLY HIS HIS HIS HIS SEQRES 32 A 405 HIS HIS HET C8E B 406 7 HET C8E B 407 8 HET C8E B 408 19 HET SO4 B 409 5 HET SO4 B 410 5 HET SO4 B 411 5 HET SO4 B 412 5 HET SO4 B 413 5 HET 3PE A 406 20 HET C8E A 407 14 HET C8E A 408 16 HET SO4 A 409 5 HET SO4 A 410 5 HETNAM C8E (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE HETNAM SO4 SULFATE ION HETNAM 3PE 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE HETSYN 3PE 3-SN-PHOSPHATIDYLETHANOLAMINE FORMUL 3 C8E 5(C16 H34 O5) FORMUL 6 SO4 7(O4 S 2-) FORMUL 11 3PE C41 H82 N O8 P FORMUL 16 HOH *242(H2 O) HELIX 1 1 VAL B 315 GLY B 318 5 4 SHEET 1 A19 LYS B 14 PHE B 28 0 SHEET 2 A19 LYS B 36 ARG B 49 -1 O ARG B 49 N LYS B 14 SHEET 3 A19 GLY B 58 LYS B 70 -1 O GLY B 65 N LEU B 46 SHEET 4 A19 ASP B 94 VAL B 106 -1 O ARG B 97 N LEU B 66 SHEET 5 A19 SER B 109 TRP B 116 -1 O ILE B 113 N GLY B 102 SHEET 6 A19 THR B 134 ALA B 142 -1 O GLY B 137 N GLY B 114 SHEET 7 A19 LEU B 148 SER B 159 -1 O ALA B 152 N LEU B 140 SHEET 8 A19 PHE B 182 PHE B 191 -1 O GLY B 186 N TYR B 151 SHEET 9 A19 SER B 196 LEU B 205 -1 O ASN B 202 N ALA B 185 SHEET 10 A19 TYR B 209 LEU B 222 -1 O GLN B 211 N ALA B 203 SHEET 11 A19 TRP B 225 ASP B 238 -1 O LEU B 227 N GLN B 220 SHEET 12 A19 ASP B 248 TYR B 260 -1 O ARG B 259 N LEU B 226 SHEET 13 A19 HIS B 263 SER B 273 -1 O LEU B 269 N ALA B 254 SHEET 14 A19 ARG B 304 ASP B 313 -1 O GLN B 307 N GLY B 268 SHEET 15 A19 LEU B 322 LEU B 336 -1 O TYR B 328 N LEU B 308 SHEET 16 A19 THR B 340 THR B 355 -1 O GLU B 351 N MET B 325 SHEET 17 A19 ASN B 365 ARG B 375 -1 O TRP B 368 N LEU B 352 SHEET 18 A19 PHE B 383 SER B 395 -1 O SER B 391 N ASN B 365 SHEET 19 A19 LYS B 14 PHE B 28 -1 N ASN B 21 O VAL B 390 SHEET 1 B 2 VAL B 119 LEU B 120 0 SHEET 2 B 2 LEU B 123 ARG B 124 -1 O LEU B 123 N LEU B 120 SHEET 1 C 2 MET B 169 SER B 170 0 SHEET 2 C 2 THR B 178 SER B 179 -1 O SER B 179 N MET B 169 SHEET 1 D19 LYS A 14 PHE A 28 0 SHEET 2 D19 LYS A 36 ARG A 49 -1 O ALA A 37 N ARG A 26 SHEET 3 D19 VAL A 57 LYS A 70 -1 O TYR A 67 N PHE A 44 SHEET 4 D19 ASP A 94 VAL A 106 -1 O ARG A 97 N LEU A 66 SHEET 5 D19 SER A 109 TRP A 116 -1 O ILE A 113 N GLY A 102 SHEET 6 D19 THR A 134 ILE A 145 -1 O GLY A 137 N GLY A 114 SHEET 7 D19 LEU A 148 SER A 159 -1 O ALA A 152 N LEU A 140 SHEET 8 D19 PHE A 182 PHE A 191 -1 O GLY A 186 N TYR A 151 SHEET 9 D19 SER A 196 LEU A 205 -1 O GLU A 204 N ASP A 183 SHEET 10 D19 TYR A 209 LEU A 222 -1 O GLN A 217 N LEU A 197 SHEET 11 D19 TRP A 225 ASP A 238 -1 O LEU A 231 N LEU A 216 SHEET 12 D19 ASP A 248 TYR A 260 -1 O ARG A 259 N LEU A 226 SHEET 13 D19 HIS A 263 SER A 273 -1 O LEU A 269 N ALA A 254 SHEET 14 D19 ARG A 304 ASP A 313 -1 O SER A 305 N GLN A 270 SHEET 15 D19 LEU A 322 LEU A 336 -1 O TYR A 328 N LEU A 308 SHEET 16 D19 THR A 340 THR A 355 -1 O GLU A 351 N MET A 325 SHEET 17 D19 ASN A 365 ARG A 375 -1 O ARG A 374 N TRP A 346 SHEET 18 D19 PHE A 383 SER A 395 -1 O ARG A 387 N ARG A 369 SHEET 19 D19 LYS A 14 PHE A 28 -1 N ASN A 27 O ASP A 384 SHEET 1 E 2 VAL A 119 LEU A 120 0 SHEET 2 E 2 LEU A 123 ARG A 124 -1 O LEU A 123 N LEU A 120 SHEET 1 F 2 MET A 169 LEU A 171 0 SHEET 2 F 2 ARG A 174 SER A 179 -1 O SER A 179 N MET A 169 CISPEP 1 ASP B 72 GLY B 73 0 5.07 CISPEP 2 GLY A 6 GLN A 7 0 -7.66 SITE 1 AC1 7 PHE A 314 C8E A 407 LEU B 308 TYR B 310 SITE 2 AC1 7 THR B 326 ARG B 327 ARG B 348 SITE 1 AC2 3 TYR B 310 PHE B 312 SO4 B 413 SITE 1 AC3 7 TYR A 354 HIS B 25 ASN B 27 ASN B 370 SITE 2 AC3 7 ASP B 384 GLU B 385 ASN B 386 SITE 1 AC4 3 PHE B 9 THR B 53 GLN B 54 SITE 1 AC5 4 ARG B 161 ASN B 162 HOH B 498 HOH B 504 SITE 1 AC6 1 ARG B 97 SITE 1 AC7 2 ARG B 235 HOH B 451 SITE 1 AC8 4 HIS B 263 PHE B 312 LEU B 317 C8E B 407 SITE 1 AC9 5 GLY A 8 PHE A 9 LEU A 10 THR A 53 SITE 2 AC9 5 GLN A 54 SITE 1 BC1 4 HIS A 263 PHE A 312 PHE A 324 C8E B 406 SITE 1 BC2 7 LEU A 66 TYR A 67 GLY A 96 ARG A 97 SITE 2 BC2 7 ARG A 235 ARG A 250 VAL A 252 SITE 1 BC3 2 GLN A 54 GLY A 55 SITE 1 BC4 1 ARG A 161 CRYST1 46.321 206.899 51.581 90.00 99.09 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021588 0.000000 0.003454 0.00000 SCALE2 0.000000 0.004833 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019634 0.00000 MASTER 482 0 13 1 46 0 17 6 0 0 0 64 END